View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7470_low_32 (Length: 240)
Name: NF7470_low_32
Description: NF7470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7470_low_32 |
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Alignment Details
Target: chr5 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 4 - 224
Target Start/End: Original strand, 26239546 - 26239766
Alignment:
| Q |
4 |
aatgtattaaaaagtgtaaaagatgttctcttcgatgtaaaacttaccnnnnnnnnnnnnnnnnnncttaagtaatgtccctagacttaaagtaaatgtt |
103 |
Q |
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| T |
26239546 |
aatgtattaaaaagtgtaaaagatgttctcttcggtgtaaaacttacctttttatatttttattttcttatgtaatgtccctagacttaaagtaaatgtt |
26239645 |
T |
|
| Q |
104 |
cataaaatatatattttttgtatgtgaaacacattttgcgataaatctttgtaattaataattttttatcaggtagagacggtaaaagaagttatattaa |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
26239646 |
cataaaatatatattttttgtatgtgaaacacattttgcgataaatctttgcaattaatcattttttatcaggtagagacggtaaaagaagttatattaa |
26239745 |
T |
|
| Q |
204 |
aatgatgtaataagtggtaat |
224 |
Q |
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||||||||||||||||||||| |
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| T |
26239746 |
aatgatgtaataagtggtaat |
26239766 |
T |
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