View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7470_low_33 (Length: 240)

Name: NF7470_low_33
Description: NF7470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7470_low_33
NF7470_low_33
[»] chr3 (5 HSPs)
chr3 (15-232)||(14693217-14693434)
chr3 (39-232)||(10782167-10782360)
chr3 (27-232)||(7401977-7402182)
chr3 (18-226)||(10150777-10150985)
chr3 (16-229)||(13306870-13307082)
[»] chr7 (3 HSPs)
chr7 (15-232)||(14342647-14342864)
chr7 (15-180)||(18133578-18133743)
chr7 (20-211)||(18171646-18171837)
[»] chr8 (3 HSPs)
chr8 (48-232)||(1735317-1735501)
chr8 (15-232)||(17422845-17423062)
chr8 (15-223)||(22348764-22348972)
[»] chr2 (4 HSPs)
chr2 (15-223)||(23200629-23200837)
chr2 (15-223)||(22638304-22638512)
chr2 (15-223)||(23626258-23626466)
chr2 (15-223)||(24911884-24912091)
[»] scaffold0022 (1 HSPs)
scaffold0022 (15-226)||(11347-11558)
[»] scaffold0016 (1 HSPs)
scaffold0016 (15-223)||(126559-126767)
[»] scaffold0319 (1 HSPs)
scaffold0319 (15-223)||(9626-9834)
[»] chr6 (2 HSPs)
chr6 (15-205)||(23435091-23435281)
chr6 (15-223)||(19035178-19035386)
[»] chr4 (2 HSPs)
chr4 (15-226)||(13289364-13289575)
chr4 (54-223)||(14772567-14772736)
[»] scaffold0130 (1 HSPs)
scaffold0130 (15-211)||(43131-43327)
[»] scaffold0108 (1 HSPs)
scaffold0108 (15-226)||(26194-26405)
[»] scaffold0040 (1 HSPs)
scaffold0040 (15-223)||(29608-29816)
[»] scaffold0241 (1 HSPs)
scaffold0241 (48-223)||(11493-11668)
[»] chr1 (2 HSPs)
chr1 (15-223)||(22805838-22806046)
chr1 (15-132)||(41380414-41380531)
[»] scaffold0005 (1 HSPs)
scaffold0005 (63-223)||(67003-67163)
[»] scaffold0001 (1 HSPs)
scaffold0001 (15-223)||(126760-126968)
[»] scaffold0282 (1 HSPs)
scaffold0282 (63-223)||(5538-5698)
[»] chr5 (1 HSPs)
chr5 (45-223)||(21511006-21511184)
[»] scaffold0064 (1 HSPs)
scaffold0064 (18-226)||(37590-37798)
[»] scaffold0656 (1 HSPs)
scaffold0656 (15-223)||(5028-5235)
[»] scaffold0026 (1 HSPs)
scaffold0026 (15-223)||(138973-139181)
[»] scaffold0023 (2 HSPs)
scaffold0023 (45-153)||(65268-65376)
scaffold0023 (45-153)||(74446-74554)
[»] scaffold0019 (1 HSPs)
scaffold0019 (15-202)||(159086-159273)
[»] scaffold0053 (1 HSPs)
scaffold0053 (108-202)||(42285-42379)
[»] scaffold0107 (1 HSPs)
scaffold0107 (15-112)||(1844-1941)
[»] scaffold0013 (4 HSPs)
scaffold0013 (147-202)||(83915-83970)
scaffold0013 (147-202)||(121587-121642)
scaffold0013 (132-202)||(75471-75541)
scaffold0013 (147-229)||(148842-148924)
[»] scaffold0046 (1 HSPs)
scaffold0046 (130-229)||(33649-33748)


Alignment Details
Target: chr3 (Bit Score: 130; Significance: 2e-67; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 15 - 232
Target Start/End: Complemental strand, 14693434 - 14693217
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    ||||||||||||||||||||||| |||| ||||||||| || ||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||      
T  14693434 gacatcaccaatattgacaaaacggaggacaagcagaaagccgtgttcgaaatggttaaaaaaccagcaacagagagaatttcacccccattgtcaatct 14693335  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcc 214  Q
    |||||||| | || |||||||| ||| |||||||||||||||||||||| |||||||| ||||  || ||||||||||||||||||||||| ||| ||||    
T  14693334 tgaagaaagaccattccaaagaggataaggagatgacttcaaatttcacggaatctgacccaaacctcgacatagtttgcaatgtggtttctatcttgcc 14693235  T
Q  215 tgtggaatatgatgtcca 232  Q
    ||||||||| ||||||||    
T  14693234 tgtggaatacgatgtcca 14693217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 39 - 232
Target Start/End: Original strand, 10782167 - 10782360
Alignment:
Q  39 gagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaag 138  Q
    |||| ||||||||| |||||||| || ||||||||||| ||||||||||||  ||||||  |||||||||| ||||||| |||| ||||  | |||||||    
T  10782167 gaggacaagcagaaagctgtgtttgagatggttaagaagccagcaacagagcgaatttcgcccccattgtcgattctgatgaaagatcatccaaaagaag 10782266  T
Q  139 atgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaatatgatgtcca 232  Q
    ||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  10782267 atgaggaaatgacttcgaatttcacagaatctgacccaagtcttgacatagtttgtaatgtggtttccattttgcctgtggaatatgatgtcca 10782360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 27 - 232
Target Start/End: Complemental strand, 7402182 - 7401977
Alignment:
Q  27 attgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatc 126  Q
    ||||||||||  ||||  || ||||| |||||||||||||||||||||||  |||||||||| | ||||||| |||||||||||||| |||||||  ||     
T  7402182 attgacaaaatggaggataaacagaaagctgtgttcgaaatggttaagaaggcagcaacagaaagaatttcacccccattgtcaattttgaagaagtatt 7402083  T
Q  127 actccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaatatga 226  Q
      |||||||| |||||||||||||||||||||||||| |||| ||| || ||||| ||||||||||||||||||||||| |||||||||| |||||| ||    
T  7402082 gttccaaagaggatgaggagatgacttcaaatttcacggaatgtgacccgagtctcgacatagtttgcaatgtggtttcaatcctgcctgaggaatacga 7401983  T
Q  227 tgtcca 232  Q
    ||||||    
T  7401982 tgtcca 7401977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 18 - 226
Target Start/End: Original strand, 10150777 - 10150985
Alignment:
Q  18 atcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctga 117  Q
    ||||||||| ||||||||  |||||||||||  || | |||||||||||||||||| |||||||  ||||||| ||| ||| |||||||||||||| |||    
T  10150777 atcaccaatgttgacaaaggagagggcaagcgaaaagatgtgttcgaaatggttaaaaaaccagtcacagagagaatctcacccccattgtcaattttga 10150876  T
Q  118 agaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgt 217  Q
    ||||| ||||  ||||||| ||||| || ||||||||||||||||| | |||||| || |||||||||||||| |||||||||||||| || || |||||    
T  10150877 agaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtcttgacatagtatgcaatgtggtttctatactacctgt 10150976  T
Q  218 ggaatatga 226  Q
    |||||||||    
T  10150977 ggaatatga 10150985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 13307082 - 13306870
Alignment:
Q  16 acatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattct 115  Q
    ||||||||||| || | |||||| |||  ||||||||  |||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||| |    
T  13307082 acatcaccaatgtt-ataaaacacaggataagcagaaaactgtgttcgaaatggttaagaaaccagcaacagagagaatctcacccccattgtcaatttt 13306984  T
Q  116 gaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcct 215  Q
    ||||||| ||||  ||||||| ||||| || |||||||| |||||||| | |||||| || ||||| || |||||||||||||||||||| ||||| ||     
T  13306983 gaagaaagatcatcccaaagaggatgaagatatgacttcgaatttcacgggatctgaccctagtctcgatatagtttgcaatgtggtttctatcctaccg 13306884  T
Q  216 gtggaatatgatgt 229  Q
    |||||||| |||||    
T  13306883 gtggaatacgatgt 13306870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 1e-62; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 15 - 232
Target Start/End: Complemental strand, 14342864 - 14342647
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    ||||| ||||| |||||| |||| ||||  |||||||| ||||||||||||||||||||||||||||||||| | | ||||||| ||||||||||||||     
T  14342864 gacattaccaacattgaccaaacggaggataagcagaaagctgtgttcgaaatggttaagaaaccagcaacaaaaagaatttcacccccattgtcaattt 14342765  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcc 214  Q
    |||||||| ||   |||||||| |||||||||||||||||||||||||| |||||||| || || || ||||||||||||||||||||||| ||||||||    
T  14342764 tgaagaaagattgttccaaagaggatgaggagatgacttcaaatttcacggaatctgacccgagcctcgacatagtttgcaatgtggtttcaatcctgcc 14342665  T
Q  215 tgtggaatatgatgtcca 232  Q
    ||||||||| ||||||||    
T  14342664 tgtggaatacgatgtcca 14342647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 18133743 - 18133578
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    ||||||||||||||||||||||  ||||||||||| || | ||||||||| ||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  18133743 gacatcaccaatattgacaaaagggagggcaagcaaaaagttgtgttcgagatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 18133644  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtc 180  Q
    |||||||| |||  ||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  18133643 tgaagaaagatcgttccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtc 18133578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 18171837 - 18171646
Alignment:
Q  20 caccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaag 119  Q
    ||||||| ||||||||  |||||| |||||||| |||||||||||||||||||| |||||||||||||| | ||||||  |||||||||||||  |||||    
T  18171837 caccaatgttgacaaaggagagggtaagcagaaagctgtgttcgaaatggttaaaaaaccagcaacagaaagaatttcgcccccattgtcaatcttgaag 18171738  T
Q  120 aaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcct 211  Q
    ||| ||||  |||| || ||||| || |||||||| |||||||| | |||||| || ||||| |||||||| | |||||||||||| |||||    
T  18171737 aaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtacaatgtggtttctatcct 18171646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 1e-59; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 48 - 232
Target Start/End: Original strand, 1735317 - 1735501
Alignment:
Q  48 cagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgaggaga 147  Q
    ||||| ||||||||||| ||||||||||| |||||||||||   ||||||| ||||||||||||||||||||||| |||| || |||||||| |||||||    
T  1735317 cagaaagctgtgttcgagatggttaagaagccagcaacagaacgaatttcacccccattgtcaattctgaagaaagatcattcaaaagaagacgaggaga 1735416  T
Q  148 tgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaatatgatgtcca 232  Q
    |||||||||||||||| |||||||| ||||||||||||||||| || ||||||||||||||| ||||||||||||| ||||||||    
T  1735417 tgacttcaaatttcacggaatctgacccaagtcttgacatagtctgtaatgtggtttccatcttgcctgtggaatacgatgtcca 1735501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 15 - 232
Target Start/End: Complemental strand, 17423062 - 17422845
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    |||||||||||| |||||||||| ||||  |||||||| |  |||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||      
T  17423062 gacatcaccaatgttgacaaaacggaggataagcagaaagaggtgttcgaaatggttaagaaaccagcaacagagagaatctcacccccattgtcaatct 17422963  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcc 214  Q
    |||||||| ||||  ||||||| ||||||||||||||||| |||||||| | |||||| || || || ||||||||||||||||||||||| ||||| ||    
T  17422962 tgaagaaagatcatcccaaagaggatgaggagatgacttcgaatttcacgggatctgacccgagcctcgacatagtttgcaatgtggtttctatcctacc 17422863  T
Q  215 tgtggaatatgatgtcca 232  Q
    ||||||||| ||||||||    
T  17422862 tgtggaatacgatgtcca 17422845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 22348972 - 22348764
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    |||||||||||| ||||||||    | ||||||||||| | |||||||||||||||||| |||||||||| ||||| ||| ||| ||||||||||||||     
T  22348972 gacatcaccaatgttgacaaagggaaaggcaagcagaaagttgtgttcgaaatggttaaaaaaccagcaatagagagaatctcacccccattgtcaattt 22348873  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcc 214  Q
    | |||||| ||||  ||||||| ||||| || ||||||||||||||||  | |||||| || |||||||| || || |||||||||||||| ||||| ||    
T  22348872 taaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcattggatctgaccccagtcttgatatcgtatgcaatgtggtttcgatcctacc 22348773  T
Q  215 tgtggaata 223  Q
    |||| ||||    
T  22348772 tgtgaaata 22348764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 2e-57; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 23200837 - 23200629
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||     
T  23200837 gacatcaccaatgttgacaaaacagagggtaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattt 23200738  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcc 214  Q
    |||||||| ||||  ||||||| ||||| || |||||||| |||||||| | |||||| || ||||| || ||||| |||||||||||||| ||||| ||    
T  23200737 tgaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttcacgggatctgaccctagtctcgatatagtgtgcaatgtggtttctatcctacc 23200638  T
Q  215 tgtggaata 223  Q
     ||||||||    
T  23200637 ggtggaata 23200629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 15 - 223
Target Start/End: Original strand, 22638304 - 22638512
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    ||||||||| || |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||     
T  22638304 gacatcaccgatgttgataaaacagagggtaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattt 22638403  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcc 214  Q
    |||||||| ||||  ||||||| ||||| || |||||||| |||||||| | |||||| || ||||| |||||||| |||||||||||||| ||||| ||    
T  22638404 tgaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttctatcctacc 22638503  T
Q  215 tgtggaata 223  Q
     ||||||||    
T  22638504 ggtggaata 22638512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 23626466 - 23626258
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    |||||||||||| |||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||  |||||||||||||      
T  23626466 gacatcaccaatgttgacaaaacagagggtaagcagaaagctgtgttcaaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaatat 23626367  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcc 214  Q
    |||| ||| ||||  |||| || ||||  || |||||||| |||||||| | |||||| || ||||| |||||||| |||||||||||||| ||||| ||    
T  23626366 tgaaaaaagatcatcccaaggaggatgtagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttctatcctacc 23626267  T
Q  215 tgtggaata 223  Q
     ||||||||    
T  23626266 ggtggaata 23626258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 223
Target Start/End: Original strand, 24911884 - 24912091
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    |||||||||||||||||||||    | || |||||||  ||||| |||||||||||||| |||||||||||| ||| ||||||| |||| ||||||||      
T  24911884 gacatcaccaatattgacaaagggaaaggaaagcagagagctgttttcgaaatggttaaaaaaccagcaacaaagagaatttcaccccc-ttgtcaatct 24911982  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcc 214  Q
    | |||||  | ||  ||||||| ||||| || ||||||||||||||||| | |||||| || ||||| |||||||| ||||||||||| || || ||  |    
T  24911983 taaagaaggaccatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtctcgacatagtatgcaatgtggtatcaattctatc 24912082  T
Q  215 tgtggaata 223  Q
    |||||||||    
T  24912083 tgtggaata 24912091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 15 - 226
Target Start/End: Original strand, 11347 - 11558
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||| ||| ||  ||||||||||||||     
T  11347 gacatcaccaatgttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaaaaaaccagcaacagagagaatctcgcccccattgtcaattt 11446  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcc 214  Q
    | |||||| ||||  ||||||| ||||| || ||||||||||||||||| |||||||| || |||||  ||||||| |||||||||||||| ||||| ||    
T  11447 taaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactgaatctgaccctagtctcaacatagtatgcaatgtggtttctatcctacc 11546  T
Q  215 tgtggaatatga 226  Q
    | ||||||||||    
T  11547 tatggaatatga 11558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 126767 - 126559
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    ||||||||| || |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||     
T  126767 gacatcaccgatgttgataaaacagagggtaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattt 126668  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcc 214  Q
    |||||||| ||||  ||||||| ||||| || |||||||| |||||||| | |||||| || ||||| || ||||| |||||||||||||| ||||| ||    
T  126667 tgaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgatatagtgtgcaatgtggtttctatcctacc 126568  T
Q  215 tgtggaata 223  Q
     ||||||||    
T  126567 ggtggaata 126559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 223
Target Start/End: Original strand, 9626 - 9834
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    |||||||||||| ||||||||  |||||| |||||||| |||||||||||||||||||| || ||||||||||||| ||| ||| ||||||||||||||     
T  9626 gacatcaccaatgttgacaaaggagagggtaagcagaaagctgtgttcgaaatggttaaaaagccagcaacagagagaatctcacccccattgtcaattt 9725  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcc 214  Q
    | |||||| | ||  ||||||| ||||| || ||||||||||||||||| | |||||| || ||||| |||||||| |||||||||||||| ||||| ||    
T  9726 taaagaaagaacatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccctagtctcgacatagtatgcaatgtggtttctatcctacc 9825  T
Q  215 tgtggaata 223  Q
    |||||||||    
T  9826 tgtggaata 9834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 5e-49; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 23435091 - 23435281
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    |||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||  ||||||||||||||     
T  23435091 gacatcaccaatgttgacaaaacagagggtaagcagaaggttgtgttcgaaatggttaagaaaccagcaatagagagaatctcgcccccattgtcaattt 23435190  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttc 205  Q
    |||||||| ||||  |||| || ||||| || |||||||| |||||||| | |||||| || ||||| |||||||| ||||||||||||||    
T  23435191 tgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcacgggatctgaccctagtctcgacatagtgtgcaatgtggtttc 23435281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 19035386 - 19035178
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    |||||||||||| ||||||||  |||||||||||| || ||| |||||||||| ||||| |||||||||||||||| ||| ||||| ||||||||||||     
T  19035386 gacatcaccaatgttgacaaaggagagggcaagcaaaaagctatgttcgaaatagttaaaaaaccagcaacagagagaatctcatctccattgtcaattt 19035287  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcc 214  Q
    ||||||||||| |  ||||| | ||||| || |||||||| |||||||| | |||||| || |||||||| ||  | ||||||||||| || ||||| ||    
T  19035286 tgaagaaaaataatcccaaaaaggatgaagaaatgacttcgaatttcactggatctgaccccagtcttgatattatatgcaatgtggtctcgatcctacc 19035187  T
Q  215 tgtggaata 223  Q
    |||||||||    
T  19035186 tgtggaata 19035178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 15 - 226
Target Start/End: Complemental strand, 13289575 - 13289364
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    |||||||||||| ||||||||  |||||| |||||||| |||||||||||||||||||| || ||||||||||||| ||| ||  ||||||||||||||     
T  13289575 gacatcaccaatgttgacaaaggagagggtaagcagaaagctgtgttcgaaatggttaaaaagccagcaacagagagaatctcgcccccattgtcaattt 13289476  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcc 214  Q
    | |||||| ||||  ||||||| ||||| || |||||||| |||||||| | |||||| || ||||| |||||||| |||||||||||||| ||||| ||    
T  13289475 taaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaatgtggtttctatcctacc 13289376  T
Q  215 tgtggaatatga 226  Q
    | ||||||||||    
T  13289375 tttggaatatga 13289364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 54 - 223
Target Start/End: Complemental strand, 14772736 - 14772567
Alignment:
Q  54 gctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgaggagatgactt 153  Q
    ||||| |||||||||||||| |||||||||||||||| ||| ||| |||||||||||||||| |||||| ||||  ||||||| ||||| || |||||||    
T  14772736 gctgtattcgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattctaaagaaagatcatcccaaagaggatgaagaaatgactt 14772637  T
Q  154 caaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 223  Q
    |||||||||| | |||||| || ||||| || ||||| ||||||||||| || ||||| |||||||||||    
T  14772636 caaatttcactggatctgaccccagtctcgatatagtatgcaatgtggtctcgatcctacctgtggaata 14772567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 211
Target Start/End: Original strand, 43131 - 43327
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    |||||||||||| |||| ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||  ||||||||||||||     
T  43131 gacatcaccaatgttgataaaacagagggtaagcagaaagctgtgttcaaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattt 43230  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcct 211  Q
    |||||||| ||||  |||| || ||||| ||  ||||||| |||||||| | |||||| || ||||| |||||||| |||||||||||||| |||||    
T  43231 tgaagaaagatcatcccaaggaggatgaagaactgacttcgaatttcacgggatctgaccctagtctcgacatagtgtgcaatgtggtttctatcct 43327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 226
Target Start/End: Original strand, 26194 - 26405
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    |||||||||||| ||||||||  |||||  || ||||| |||||||||||||||||||| || ||||||||||||| ||| ||| ||||||||||||||     
T  26194 gacatcaccaatgttgacaaaggagaggataaacagaaagctgtgttcgaaatggttaaaaagccagcaacagagagaatctcacccccattgtcaattt 26293  T
Q  115 tgaagaaa-aatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgc 213  Q
    |||||||| | || || ||| || ||||| ||||||||||| |||||||| | |||||| || ||||| |||||||| ||||| ||||| |||||||| |    
T  26294 tgaagaaagactctct-caaggaggatgaagagatgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaacgtggtgtccatcctac 26392  T
Q  214 ctgtggaatatga 226  Q
    |||||||||||||    
T  26393 ctgtggaatatga 26405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 223
Target Start/End: Original strand, 29608 - 29816
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    |||||||||||||||||||||| | |||||||||| || | |||||||||||||||||| |||||||| | ||||| ||| ||| |||| |||||||||     
T  29608 gacatcaccaatattgacaaaagaaagggcaagcaaaaagatgtgttcgaaatggttaaaaaaccagccatagagagaatctcacccccgttgtcaattt 29707  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcc 214  Q
    |||||||| ||||  ||||||| ||||| || ||||| ||| ||||||| | |||||| || || || |||||||| |||||||||||||| ||||| ||    
T  29708 tgaagaaagatcatcccaaagaggatgaagaaatgacctcagatttcaccggatctgaccccagcctagacatagtatgcaatgtggtttctatcctacc 29807  T
Q  215 tgtggaata 223  Q
     ||||||||    
T  29808 agtggaata 29816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 48 - 223
Target Start/End: Original strand, 11493 - 11668
Alignment:
Q  48 cagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgaggaga 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||||| ||| ||| |||||||||||||| | |||||| ||||  ||||||| ||||| || |    
T  11493 cagaaagctgtattcgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattataaagaaagatcatcccaaagaggatgaagaaa 11592  T
Q  148 tgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 223  Q
    |||||||||||||||| | |||||| || |||||||| || || ||||||||||| || ||||| |||||||||||    
T  11593 tgacttcaaatttcactggatctgaccccagtcttgatatcgtatgcaatgtggtctcaatcctacctgtggaata 11668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 22806046 - 22805838
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    |||||||||||| ||||||||    | || |||||||  ||||| || ||||||||||| |||||||||||||||| ||| ||| |||||||||||||||    
T  22806046 gacatcaccaatgttgacaaagggaaaggaaagcagagagctgtatttgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattc 22805947  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcc 214  Q
    | |||||| ||||  ||||||| ||||| || ||||||||||||||||| | |||||| || | ||| || ||||| ||||||||||| || ||||| ||    
T  22805946 taaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccaatctcgatatagtatgcaatgtggtctcaatcctacc 22805847  T
Q  215 tgtggaata 223  Q
    |||||||||    
T  22805846 tgtggaata 22805838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 41380531 - 41380414
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    |||| |||||| |||||||| |  |||||||||||||| ||||||||||| ||||||||||| ||||||||||||  ||||||| ||||||||||||||     
T  41380531 gacaccaccaacattgacaagatggagggcaagcagaaagctgtgttcgagatggttaagaagccagcaacagagcgaatttcacccccattgtcaattt 41380432  T
Q  115 tgaagaaaaatcactcca 132  Q
    |||||||| |||| ||||    
T  41380431 tgaagaaagatcattcca 41380414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 63 - 223
Target Start/End: Original strand, 67003 - 67163
Alignment:
Q  63 gaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttca 162  Q
    ||||||||| | |||||||||||||||| ||| ||| |||||||||||||||| |||||| ||||  ||||||| ||||| || ||||||||||||||||    
T  67003 gaaatggtttaaaaaccagcaacagagagaatctcacccccattgtcaattctaaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttca 67102  T
Q  163 cagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 223  Q
    | | |||||| || ||||| || ||||| ||||||||||| || ||||| |||||||||||    
T  67103 ctggatctgaccccagtctcgatatagtatgcaatgtggtctcaatcctacctgtggaata 67163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 126968 - 126760
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    |||||| ||||| ||||||||    |||| |||||||| || ||||||||||||||||| |||||| ||||||||| ||| ||| ||||||||| ||||     
T  126968 gacatctccaatgttgacaaagggaagggaaagcagaaagcggtgttcgaaatggttaaaaaaccaacaacagagagaatctcacccccattgtgaattt 126869  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcc 214  Q
    | |||||| ||||  |||| || ||||| || ||||||||||||||||| | |||||| || |||||||| || || ||||||||||| || ||||| ||    
T  126868 taaagaaagatcatcccaatgaggatgaagaaatgacttcaaatttcacgggatctgaccccagtcttgatatcgtatgcaatgtggtctcgatcctacc 126769  T
Q  215 tgtggaata 223  Q
    |||||||||    
T  126768 tgtggaata 126760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 63 - 223
Target Start/End: Complemental strand, 5698 - 5538
Alignment:
Q  63 gaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttca 162  Q
    ||||||||| | |||||||||||||||| ||| ||| |||||||||||||||| |||||| ||||  ||||||| ||||| || ||||||||||||||||    
T  5698 gaaatggtttaaaaaccagcaacagagagaatctcacccccattgtcaattctaaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttca 5599  T
Q  163 cagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 223  Q
    | | |||||| || ||||| || ||||| ||||||||||| || || || |||||||||||    
T  5598 ctggatctgaccccagtctcgatatagtatgcaatgtggtctcaattctacctgtggaata 5538  T

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Target: chr5 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 45 - 223
Target Start/End: Original strand, 21511006 - 21511184
Alignment:
Q  45 aagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgagg 144  Q
    |||||||| || ||||||||||||||||| |||||||||||||||| ||| ||| |||||||||||||| | |||||| ||||  |||| || ||||| |    
T  21511006 aagcagaaagcggtgttcgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattttaaagaaagatcatcccaaggaggatgaag 21511105  T
Q  145 agatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 223  Q
    | ||||||||||||||||| | |||||| || |||||||| ||  | ||||||||||| || ||| | | |||||||||    
T  21511106 aaatgacttcaaatttcactggatctgaccccagtcttgatatcatatgcaatgtggtctcgatcttacttgtggaata 21511184  T

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Target: scaffold0064 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 226
Target Start/End: Complemental strand, 37798 - 37590
Alignment:
Q  18 atcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctga 117  Q
    ||||||||| ||| ||||  |||||  || ||||| |||||||||||||||||||| || ||||||||| ||| ||||||| |||||||||||||| |||    
T  37798 atcaccaattttgtcaaaggagaggttaaacagaaagctgtgttcgaaatggttaaaaagccagcaacatagagaatttcacccccattgtcaattttga 37699  T
Q  118 agaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgt 217  Q
    ||||| |     |||| || ||||| || |||||||| |||||||| | |||||| || ||||| |||||||| || || ||||| || ||||| |||||    
T  37698 agaaagactttcccaaggaggatgaagatatgacttcgaatttcactggatctgaccctagtctcgacatagtatgtaacgtggtgtctatcctacctgt 37599  T
Q  218 ggaatatga 226  Q
    |||||||||    
T  37598 ggaatatga 37590  T

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Target: scaffold0656 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0656
Description:

Target: scaffold0656; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 223
Target Start/End: Original strand, 5028 - 5235
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    |||||||||||||||||||||  | |||| ||||| |  ||||| |||||||||||||| || ||||||||||||| ||| ||| |||| ||||||||      
T  5028 gacatcaccaatattgacaaaggaaaggg-aagcaaatagctgttttcgaaatggttaaaaagccagcaacagagagaatctcaccccccttgtcaatct 5126  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcc 214  Q
    | |||||| | ||  |||| || ||||| || |||||||| |||||||| | |||||| |  ||||| |||||||| ||||||||||| || || || ||    
T  5127 taaagaaagaccatcccaaggaggatgaagaaatgacttcgaatttcactggatctgacctcagtctcgacatagtatgcaatgtggtatcaattctacc 5226  T
Q  215 tgtggaata 223  Q
    |||||||||    
T  5227 tgtggaata 5235  T

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Target: scaffold0026 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 139181 - 138973
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    |||||||||||| ||||||||    | || |||||||  ||||| |||||||||||||| |||||||||||| |||  || ||| | || ||||||||      
T  139181 gacatcaccaatgttgacaaagggaaaggaaagcagagagctgtattcgaaatggttaaaaaaccagcaacaaagaggatctcacctcccttgtcaatct 139082  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcc 214  Q
    | |||||| | ||  ||||||| ||||| || |||||||| |||||||| |  ||||| || ||||| |||||||| |||||||||||||| ||||| ||    
T  139081 taaagaaagaccatcccaaagaggatgaagaaatgacttcgaatttcactgggtctgaccctagtctcgacatagtatgcaatgtggtttcaatcctacc 138982  T
Q  215 tgtggaata 223  Q
    ||| |||||    
T  138981 tgtagaata 138973  T

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Target: scaffold0023 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 65268 - 65376
Alignment:
Q  45 aagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgagg 144  Q
    |||||||| | |||||||||||||||||| |||||||||||||||| ||| | | |||||||||||||| | |||||| ||||  ||||||| ||||| |    
T  65268 aagcagaaagttgtgttcgaaatggttaaaaaaccagcaacagagagaatctaacccccattgtcaattttaaagaaagatcatcccaaagaggatgaag 65367  T
Q  145 agatgactt 153  Q
    | |||||||    
T  65368 aaatgactt 65376  T

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Target: scaffold0023; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 74446 - 74554
Alignment:
Q  45 aagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgagg 144  Q
    |||||||| | |||||||||||||||||| |||||||||||||||| ||| | | |||||||||||||| | |||||| ||||  ||||||| ||||| |    
T  74446 aagcagaaagttgtgttcgaaatggttaaaaaaccagcaacagagagaatctaacccccattgtcaattttaaagaaagatcatcccaaagaggatgaag 74545  T
Q  145 agatgactt 153  Q
    | |||||||    
T  74546 aaatgactt 74554  T

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Target: scaffold0019 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 159273 - 159086
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattc 114  Q
    |||||||||||||||||||||    | || |||||||| || || || ||||||||||| || ||||||||||| | ||| ||| | || || |||||      
T  159273 gacatcaccaatattgacaaagggaaagggaagcagaaagccgtttttgaaatggttaaaaagccagcaacagaaagaatctcaccgcccttatcaatct 159174  T
Q  115 tgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggt 202  Q
    |||||||||| ||  |||| || ||||| || |||||||| |||||||| | |||||| || ||||| |||||||| |||||||||||    
T  159173 tgaagaaaaaccatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaatgtggt 159086  T

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Target: scaffold0053 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 202
Target Start/End: Complemental strand, 42379 - 42285
Alignment:
Q  108 tcaattctgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggt 202  Q
    |||||| |||||||||||||  | || || ||||| || ||||| || |||||||| ||||||||||||||||| || ||||| |||||||||||    
T  42379 tcaattttgaagaaaaatcatcctaaggaggatgaagaaatgacgtcgaatttcactgaatctgatccaagtctcgatatagtgtgcaatgtggt 42285  T

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Target: scaffold0107 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 1844 - 1941
Alignment:
Q  15 gacatcaccaatattgacaaaacagagggcaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaat 112  Q
    |||||||||||| ||||||||    | || |||||||  ||||| |||||||||||||| |||||||||||||||| ||| ||| |||| ||||||||    
T  1844 gacatcaccaatgttgacaaagggaaaggaaagcagagagctgttttcgaaatggttaaaaaaccagcaacagagagaatctcaccccccttgtcaat 1941  T

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Target: scaffold0013 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 83915 - 83970
Alignment:
Q  147 atgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggt 202  Q
    ||||| |||||||||||||||||||| |||||||| || ||||| |||||||||||    
T  83915 atgacgtcaaatttcacagaatctgacccaagtctcgatatagtatgcaatgtggt 83970  T

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Target: scaffold0013; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 121587 - 121642
Alignment:
Q  147 atgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggt 202  Q
    ||||| |||||||||||||||||||| |||||||| || ||||| |||||||||||    
T  121587 atgacgtcaaatttcacagaatctgacccaagtctcgatatagtatgcaatgtggt 121642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 75471 - 75541
Alignment:
Q  132 aaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggt 202  Q
    ||||| ||||| || ||||| ||||||||||||||||||||  ||||||| || ||||| |||||||||||    
T  75471 aaagaggatgaagaaatgacgtcaaatttcacagaatctgactcaagtctcgatatagtatgcaatgtggt 75541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 148842 - 148924
Alignment:
Q  147 atgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaatatgatgt 229  Q
    ||||| |||||||||||| ||||||| |||||||| || ||||| ||||||||||| || ||  ||| ||| |||||||||||    
T  148842 atgacgtcaaatttcacaaaatctgacccaagtctcgatatagtatgcaatgtggtatcaatattgcatgttgaatatgatgt 148924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 33649 - 33748
Alignment:
Q  130 ccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaatatgatgt 229  Q
    ||||||| ||||| || |||||||| |||||||  | |||||| || ||||| |||||||| ||||||||||| ||  |  ||||||||||||| |||||    
T  33649 ccaaagaggatgaagaaatgacttcgaatttcattggatctgaccccagtctcgacatagtgtgcaatgtggtgtcagttttgcctgtggaatacgatgt 33748  T

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