View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7471_low_11 (Length: 212)
Name: NF7471_low_11
Description: NF7471
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7471_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 43303693 - 43303514
Alignment:
| Q |
16 |
acctgtgatcatatctgacaattttgtgccgccatattttgaggttttaaattgggatgcattctcattaatccttgcagagaaagatattccaaacttg |
115 |
Q |
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| T |
43303693 |
acctgtgatcatatctgacaattttgtgccgccattttttgaggttttaaattgggattcattctcattaatccttgcagagaaagatattccaaacttg |
43303594 |
T |
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| Q |
116 |
aaacaaatacttctttcagtgcctgaagagaagtatctcaagctacaacttggtgtcagaagagttcagaaacattttct |
195 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43303593 |
aaacaaatacttctttcagtgcctgaagagaagtatctcaagctacaacttggtgtcagaagagttcagaaacattttct |
43303514 |
T |
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