View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7472_high_12 (Length: 282)
Name: NF7472_high_12
Description: NF7472
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7472_high_12 |
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Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 17 - 271
Target Start/End: Original strand, 5107204 - 5107458
Alignment:
| Q |
17 |
acttcctatgctttaatttaagcaaaagaacctcaaactcatcttgcatatgaagcaaagcttgatccaacaaaccttcaaatctcatttcatcaacctc |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5107204 |
acttcctatgctttaatttaagcaaaagaacctcaaactcatcttgcatatgaagcaaagcttgatccaacaaaccttcaaatctcatttcatcaacctc |
5107303 |
T |
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| Q |
117 |
agtttcataaagtgccttaagagttataagtgcttctcttaacctttgtgttctgtattgatcagcagcttttgttctgcttataaactccacaacttct |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5107304 |
agtttcataaagtgccttaagagttataagtgcttctcttaacctttgtgttctgtattgatcagcagcttttgttctgcttataaactccacaacttct |
5107403 |
T |
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| Q |
217 |
tgaagcctcataatcactggctcaacaacttcacttatagagttaatagcttcat |
271 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5107404 |
tgaagcctcataatcactggctcaacaacttcacttatagagttaatagcttcat |
5107458 |
T |
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