View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7472_high_16 (Length: 249)
Name: NF7472_high_16
Description: NF7472
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7472_high_16 |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 5107516 - 5107750
Alignment:
| Q |
1 |
tcttttctgttgatagctttgaagagaggttaaggagattgttctggagagactcagcgagtttgaaagtttcgagaagtgcaagagcaggagaaattgc |
100 |
Q |
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| T |
5107516 |
tcttttctgttgatagctttgaagagaggttaaggagattgttctggagagactcagcgagtttgaaagtttcgagaagtgcaagagcaggagaaattgc |
5107615 |
T |
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| Q |
101 |
tctattgattcttgtatcaagtgcttttcttgacatggataaggattgtaaagggtgtactcttcttgatgctgttgtgattgatccatgtaaaagatca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5107616 |
tctattgattcttgtatcaagtgcttttcttgacatggataaggattgtaaagggtgtactcttcttgatgctgttgtgattgatccatgtaaaagatca |
5107715 |
T |
|
| Q |
201 |
aacctcgtttccattgtttcgatgttttgttccat |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
5107716 |
aacctcgtttccattgtttcgatgttttgttccat |
5107750 |
T |
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