View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7474_high_1 (Length: 337)
Name: NF7474_high_1
Description: NF7474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7474_high_1 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 4 - 337
Target Start/End: Complemental strand, 21434962 - 21434631
Alignment:
| Q |
4 |
agagtaaatgcattatgatctagtagagtattttgtagttttatttctatgttttgaaaatcaaatataatcacttatacaatcatgcgaatttggtaat |
103 |
Q |
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| T |
21434962 |
agagtaaatgcattatgatctagtagagtattttgtagttttatttctatgttttgaaaatcaaatataatcacttatacaatcatgcgaatttggtaat |
21434863 |
T |
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| Q |
104 |
tcagtattagaataagaccctcaagatatttgctagagatatggtctagataaagcttataaagattagacagttttttgttttatgggatatagatcca |
203 |
Q |
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| T |
21434862 |
ttagtattagaataagaccctcaagatatttgctagagatatgg--tagataaagcttataaagattagacagttttttgttttatgggatataggtcca |
21434765 |
T |
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| Q |
204 |
aaatgtaaaatgatattaaagtttaacttggatatattatttagctgcacatattataaaacttagtgaggaacccttaccnnnnnnnnnnaacaaattc |
303 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
21434764 |
aaatgtaaaatgatattaaagtttaacttggatatattatttagctgcacatattataaaacttagtgaggaacccttaccttttttttttaacaaattc |
21434665 |
T |
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| Q |
304 |
acattgcattaatttaacatccattaatttgaca |
337 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
21434664 |
acattgcattaatttaacatccattaatttgaca |
21434631 |
T |
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