View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7475_low_4 (Length: 504)

Name: NF7475_low_4
Description: NF7475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7475_low_4
NF7475_low_4
[»] chr8 (57 HSPs)
chr8 (19-167)||(37618326-37618474)
chr8 (19-165)||(40389065-40389211)
chr8 (19-156)||(41709811-41709948)
chr8 (28-167)||(8672998-8673137)
chr8 (19-167)||(4052503-4052651)
chr8 (19-167)||(29563160-29563308)
chr8 (28-167)||(6386599-6386738)
chr8 (27-158)||(7591389-7591520)
chr8 (28-167)||(30542965-30543104)
chr8 (28-167)||(37664226-37664365)
chr8 (27-158)||(41548650-41548781)
chr8 (18-167)||(12753258-12753407)
chr8 (27-156)||(15001500-15001629)
chr8 (19-156)||(29672257-29672394)
chr8 (19-167)||(34063151-34063299)
chr8 (19-167)||(34101531-34101679)
chr8 (19-158)||(10467096-10467235)
chr8 (19-167)||(14004978-14005126)
chr8 (27-167)||(39642906-39643046)
chr8 (28-167)||(45446478-45446617)
chr8 (27-157)||(30501178-30501308)
chr8 (19-167)||(3251590-3251738)
chr8 (19-167)||(7394748-7394896)
chr8 (19-158)||(22999289-22999429)
chr8 (19-158)||(27103991-27104130)
chr8 (27-158)||(29610997-29611128)
chr8 (28-167)||(37861882-37862021)
chr8 (19-128)||(37474762-37474871)
chr8 (19-167)||(13406869-13407017)
chr8 (19-167)||(35225685-35225833)
chr8 (18-167)||(5968797-5968946)
chr8 (19-167)||(25478266-25478414)
chr8 (19-167)||(31513517-31513665)
chr8 (19-167)||(32019935-32020083)
chr8 (30-167)||(17805714-17805851)
chr8 (30-158)||(10656631-10656759)
chr8 (19-158)||(17520627-17520765)
chr8 (19-156)||(16485743-16485880)
chr8 (30-167)||(45114078-45114215)
chr8 (88-167)||(32303588-32303667)
chr8 (87-167)||(21272707-21272787)
chr8 (69-167)||(31732087-31732185)
chr8 (18-156)||(22756344-22756482)
chr8 (28-68)||(21272789-21272829)
chr8 (248-304)||(37618569-37618625)
chr8 (38-156)||(16595103-16595220)
chr8 (76-167)||(27109532-27109623)
chr8 (28-74)||(32303551-32303597)
chr8 (18-158)||(10320212-10320350)
chr8 (248-304)||(40388912-40388968)
chr8 (37-167)||(36426201-36426329)
chr8 (38-156)||(54204-54322)
chr8 (248-302)||(15001340-15001394)
chr8 (255-298)||(45113933-45113976)
chr8 (44-158)||(5892100-5892214)
chr8 (255-304)||(45446326-45446375)
chr8 (19-55)||(38047481-38047517)
[»] chr3 (64 HSPs)
chr3 (19-167)||(51925121-51925269)
chr3 (19-167)||(29584899-29585047)
chr3 (19-167)||(49748824-49748972)
chr3 (19-167)||(50678822-50678970)
chr3 (19-167)||(28675814-28675962)
chr3 (19-167)||(25860334-25860482)
chr3 (19-167)||(1344620-1344768)
chr3 (19-167)||(12349084-12349232)
chr3 (19-167)||(51259693-51259841)
chr3 (28-167)||(3864597-3864736)
chr3 (19-158)||(31882935-31883074)
chr3 (27-158)||(33364699-33364830)
chr3 (18-167)||(24571305-24571454)
chr3 (18-167)||(39052750-39052899)
chr3 (18-158)||(19906795-19906935)
chr3 (19-167)||(20609561-20609709)
chr3 (19-167)||(21221274-21221421)
chr3 (27-167)||(21373954-21374094)
chr3 (19-167)||(40094527-40094675)
chr3 (19-167)||(42636316-42636464)
chr3 (18-167)||(29646090-29646239)
chr3 (30-167)||(51296605-51296742)
chr3 (19-167)||(25927240-25927388)
chr3 (19-167)||(44116963-44117111)
chr3 (19-167)||(47958345-47958493)
chr3 (19-153)||(2135108-2135242)
chr3 (30-167)||(34026691-34026828)
chr3 (19-167)||(20255069-20255216)
chr3 (19-167)||(38213378-38213526)
chr3 (19-158)||(50386369-50386508)
chr3 (28-167)||(53557717-53557856)
chr3 (18-131)||(41682965-41683078)
chr3 (413-496)||(7685285-7685368)
chr3 (19-167)||(4851371-4851517)
chr3 (27-167)||(3964312-3964452)
chr3 (19-156)||(3867562-3867699)
chr3 (18-149)||(6179467-6179599)
chr3 (27-167)||(45690827-45690962)
chr3 (19-158)||(24721518-24721657)
chr3 (18-167)||(54622709-54622857)
chr3 (18-128)||(10747263-10747373)
chr3 (29-158)||(52300470-52300598)
chr3 (19-167)||(22484656-22484804)
chr3 (18-101)||(3695219-3695302)
chr3 (41-158)||(34351303-34351420)
chr3 (37-167)||(26282315-26282448)
chr3 (41-167)||(39215404-39215530)
chr3 (19-84)||(5442386-5442451)
chr3 (248-304)||(51925364-51925420)
chr3 (86-167)||(25954474-25954555)
chr3 (40-101)||(53046605-53046666)
chr3 (19-77)||(43175589-43175647)
chr3 (38-155)||(30258909-30259025)
chr3 (36-167)||(26847350-26847482)
chr3 (28-156)||(44000296-44000424)
chr3 (257-297)||(3867809-3867849)
chr3 (106-154)||(5442328-5442376)
chr3 (87-158)||(14155442-14155512)
chr3 (255-314)||(51259944-51260003)
chr3 (109-167)||(44267766-44267824)
chr3 (107-156)||(42547371-42547420)
chr3 (115-167)||(3695301-3695353)
chr3 (257-305)||(20609799-20609847)
chr3 (255-303)||(22484906-22484954)
[»] chr4 (92 HSPs)
chr4 (19-167)||(44324254-44324402)
chr4 (19-167)||(38812546-38812694)
chr4 (19-167)||(33176944-33177092)
chr4 (18-158)||(52949755-52949895)
chr4 (18-167)||(23521906-23522055)
chr4 (19-167)||(24002365-24002513)
chr4 (19-167)||(46680422-46680570)
chr4 (28-167)||(20802452-20802591)
chr4 (19-158)||(21202774-21202913)
chr4 (19-158)||(44649076-44649215)
chr4 (19-167)||(21580052-21580200)
chr4 (19-167)||(29785449-29785597)
chr4 (19-158)||(38486169-38486308)
chr4 (19-158)||(52319358-52319497)
chr4 (28-167)||(56154647-56154786)
chr4 (18-167)||(36885958-36886107)
chr4 (19-167)||(2629863-2630011)
chr4 (19-167)||(2725045-2725192)
chr4 (19-167)||(12600912-12601060)
chr4 (19-167)||(20694397-20694545)
chr4 (18-158)||(36497252-36497392)
chr4 (27-158)||(50178412-50178544)
chr4 (19-167)||(50727825-50727973)
chr4 (19-167)||(50735839-50735987)
chr4 (19-158)||(1231346-1231485)
chr4 (19-158)||(47642403-47642542)
chr4 (18-152)||(11056083-11056217)
chr4 (19-157)||(16320555-16320693)
chr4 (30-167)||(24210345-24210482)
chr4 (18-167)||(33552753-33552902)
chr4 (19-167)||(9512252-9512400)
chr4 (19-167)||(20517934-20518082)
chr4 (19-167)||(37865779-37865927)
chr4 (19-167)||(41711873-41712021)
chr4 (27-167)||(50729462-50729602)
chr4 (35-158)||(55065260-55065384)
chr4 (19-158)||(3649671-3649810)
chr4 (28-167)||(32181289-32181428)
chr4 (18-167)||(4325817-4325966)
chr4 (18-167)||(36743599-36743748)
chr4 (19-167)||(55593911-55594059)
chr4 (19-158)||(39078696-39078835)
chr4 (28-158)||(49152021-49152151)
chr4 (19-167)||(28115278-28115425)
chr4 (30-158)||(34929950-34930078)
chr4 (19-158)||(6776613-6776752)
chr4 (29-140)||(6973835-6973946)
chr4 (27-158)||(26083374-26083505)
chr4 (19-167)||(54543016-54543163)
chr4 (27-158)||(29592930-29593061)
chr4 (28-143)||(47361335-47361449)
chr4 (19-137)||(42870027-42870145)
chr4 (33-158)||(25978538-25978662)
chr4 (26-158)||(22318303-22318435)
chr4 (19-167)||(50186554-50186702)
chr4 (36-158)||(53200572-53200695)
chr4 (19-153)||(2787004-2787138)
chr4 (19-167)||(29616196-29616340)
chr4 (36-149)||(42772832-42772945)
chr4 (27-167)||(9807182-9807321)
chr4 (19-158)||(7554869-7555008)
chr4 (36-158)||(37695470-37695592)
chr4 (30-115)||(14296645-14296730)
chr4 (30-115)||(14314893-14314978)
chr4 (19-158)||(30942823-30942963)
chr4 (87-167)||(43641125-43641205)
chr4 (38-156)||(9947966-9948084)
chr4 (37-113)||(56487212-56487288)
chr4 (88-167)||(23327944-23328024)
chr4 (93-165)||(37931948-37932020)
chr4 (37-158)||(44355785-44355906)
chr4 (38-167)||(21098560-21098689)
chr4 (87-158)||(43739496-43739567)
chr4 (69-142)||(7001903-7001976)
chr4 (70-150)||(52673854-52673934)
chr4 (250-298)||(37931801-37931849)
chr4 (108-167)||(38520525-38520584)
chr4 (38-167)||(45577619-45577752)
chr4 (38-85)||(51518481-51518528)
chr4 (254-304)||(2786839-2786889)
chr4 (19-143)||(43189675-43189799)
chr4 (19-74)||(23328015-23328070)
chr4 (107-146)||(32858369-32858408)
chr4 (257-304)||(36497106-36497153)
chr4 (22-56)||(13110443-13110477)
chr4 (248-306)||(21202612-21202670)
chr4 (255-305)||(52319199-52319249)
chr4 (255-304)||(20802694-20802743)
chr4 (255-304)||(37865627-37865676)
chr4 (248-304)||(29592775-29592831)
chr4 (27-59)||(44640457-44640489)
chr4 (255-303)||(55065495-55065543)
[»] chr6 (49 HSPs)
chr6 (19-167)||(11279151-11279299)
chr6 (18-167)||(3259706-3259855)
chr6 (19-167)||(10960023-10960171)
chr6 (18-154)||(11675331-11675467)
chr6 (19-167)||(10324069-10324217)
chr6 (18-158)||(10485189-10485329)
chr6 (28-167)||(3379733-3379872)
chr6 (28-167)||(24203385-24203524)
chr6 (28-158)||(32132347-32132477)
chr6 (19-167)||(11382087-11382233)
chr6 (19-167)||(3932765-3932913)
chr6 (19-167)||(24242687-24242835)
chr6 (30-167)||(166892-167029)
chr6 (19-167)||(2614919-2615067)
chr6 (19-167)||(11212280-11212428)
chr6 (28-167)||(11613758-11613897)
chr6 (19-158)||(15276895-15277034)
chr6 (30-167)||(15277249-15277386)
chr6 (28-167)||(4494081-4494221)
chr6 (28-167)||(32409819-32409958)
chr6 (27-167)||(14925422-14925562)
chr6 (31-167)||(17867858-17867994)
chr6 (31-167)||(17877641-17877777)
chr6 (28-167)||(17443285-17443424)
chr6 (19-158)||(18597116-18597255)
chr6 (38-155)||(34176865-34176982)
chr6 (30-167)||(18057542-18057679)
chr6 (19-167)||(31870055-31870206)
chr6 (27-167)||(9902624-9902764)
chr6 (37-167)||(8177858-8177987)
chr6 (18-156)||(32860085-32860223)
chr6 (31-167)||(29054379-29054515)
chr6 (18-156)||(7396083-7396220)
chr6 (64-158)||(34683988-34684080)
chr6 (71-140)||(3290720-3290789)
chr6 (27-156)||(23636257-23636386)
chr6 (72-150)||(14808012-14808090)
chr6 (27-167)||(9613997-9614137)
chr6 (28-160)||(9200354-9200487)
chr6 (19-84)||(27824611-27824676)
chr6 (248-304)||(10959872-10959928)
chr6 (19-53)||(14807976-14808010)
chr6 (248-298)||(23636101-23636151)
chr6 (19-53)||(33041403-33041437)
chr6 (255-304)||(11381964-11382013)
chr6 (255-304)||(28502330-28502379)
chr6 (255-304)||(29814736-29814785)
chr6 (255-304)||(32805349-32805398)
chr6 (27-59)||(14925183-14925215)
[»] chr5 (47 HSPs)
chr5 (19-167)||(7523195-7523343)
chr5 (28-167)||(39918530-39918669)
chr5 (19-167)||(8136860-8137008)
chr5 (19-167)||(35701300-35701448)
chr5 (19-167)||(39788216-39788364)
chr5 (28-167)||(21739095-21739234)
chr5 (18-167)||(24181548-24181697)
chr5 (19-167)||(41790388-41790535)
chr5 (28-167)||(32528738-32528877)
chr5 (27-157)||(4689631-4689761)
chr5 (19-167)||(3735380-3735528)
chr5 (19-167)||(11963364-11963512)
chr5 (28-167)||(2351703-2351842)
chr5 (28-158)||(6284232-6284362)
chr5 (19-167)||(31770516-31770664)
chr5 (19-167)||(31880001-31880149)
chr5 (28-167)||(7208164-7208303)
chr5 (19-158)||(22493344-22493483)
chr5 (19-157)||(7770204-7770342)
chr5 (18-167)||(24036253-24036402)
chr5 (19-167)||(31644469-31644616)
chr5 (19-167)||(34794910-34795058)
chr5 (28-167)||(22432243-22432382)
chr5 (28-150)||(23091238-23091360)
chr5 (30-167)||(553420-553557)
chr5 (35-167)||(8560923-8561055)
chr5 (35-167)||(28090461-28090593)
chr5 (19-157)||(29241411-29241549)
chr5 (39-167)||(4818085-4818213)
chr5 (19-158)||(18470353-18470492)
chr5 (19-153)||(32092907-32093040)
chr5 (30-167)||(40489360-40489497)
chr5 (19-167)||(27838999-27839146)
chr5 (19-158)||(5598512-5598651)
chr5 (19-158)||(41459621-41459759)
chr5 (58-167)||(5571608-5571717)
chr5 (18-158)||(7725733-7725873)
chr5 (18-156)||(700525-700663)
chr5 (19-127)||(37148514-37148622)
chr5 (38-167)||(17031180-17031309)
chr5 (58-151)||(5673178-5673271)
chr5 (19-98)||(4664923-4665002)
chr5 (418-492)||(38979283-38979357)
chr5 (98-167)||(40182487-40182556)
chr5 (39-143)||(35955046-35955150)
chr5 (248-304)||(4689866-4689922)
chr5 (91-158)||(11090865-11090932)
[»] chr1 (75 HSPs)
chr1 (28-167)||(51264527-51264666)
chr1 (19-167)||(1351429-1351577)
chr1 (19-167)||(30105674-30105822)
chr1 (27-167)||(31004164-31004304)
chr1 (19-167)||(41972943-41973091)
chr1 (19-167)||(45490869-45491017)
chr1 (19-158)||(16437403-16437542)
chr1 (18-167)||(45658853-45659002)
chr1 (19-167)||(844718-844866)
chr1 (19-167)||(6711040-6711188)
chr1 (19-167)||(11772626-11772774)
chr1 (19-167)||(26118209-26118357)
chr1 (19-158)||(6029295-6029434)
chr1 (18-167)||(17887980-17888129)
chr1 (19-167)||(16386886-16387034)
chr1 (19-167)||(16451159-16451307)
chr1 (19-167)||(28340297-28340445)
chr1 (19-167)||(32289338-32289486)
chr1 (19-167)||(35387305-35387453)
chr1 (19-167)||(41967843-41967991)
chr1 (28-167)||(7183950-7184089)
chr1 (19-158)||(32270394-32270533)
chr1 (27-158)||(42512772-42512903)
chr1 (19-167)||(26764789-26764937)
chr1 (19-158)||(12890279-12890418)
chr1 (28-167)||(42510557-42510696)
chr1 (19-158)||(50304692-50304831)
chr1 (28-167)||(50540376-50540515)
chr1 (28-167)||(16476158-16476297)
chr1 (18-153)||(17327642-17327777)
chr1 (19-167)||(24339632-24339781)
chr1 (27-167)||(13994077-13994217)
chr1 (19-158)||(5109769-5109908)
chr1 (27-167)||(39281926-39282066)
chr1 (30-158)||(44738047-44738175)
chr1 (30-167)||(16704758-16704895)
chr1 (30-158)||(42705242-42705371)
chr1 (28-167)||(1601205-1601342)
chr1 (27-158)||(6143988-6144119)
chr1 (19-158)||(15539884-15540023)
chr1 (79-167)||(25539887-25539975)
chr1 (36-158)||(50382411-50382536)
chr1 (33-167)||(3414861-3414995)
chr1 (19-153)||(10384413-10384547)
chr1 (30-167)||(49303359-49303496)
chr1 (30-167)||(51703169-51703305)
chr1 (18-158)||(38086989-38087129)
chr1 (27-158)||(7837174-7837305)
chr1 (30-129)||(46154977-46155076)
chr1 (19-113)||(8838983-8839077)
chr1 (309-412)||(16103149-16103254)
chr1 (44-122)||(20494927-20495005)
chr1 (30-158)||(25343213-25343342)
chr1 (29-158)||(39792848-39792977)
chr1 (39-158)||(570427-570549)
chr1 (27-147)||(7837426-7837546)
chr1 (248-304)||(25539736-25539792)
chr1 (314-401)||(27005051-27005136)
chr1 (92-159)||(23799604-23799671)
chr1 (248-302)||(11772869-11772923)
chr1 (30-84)||(21071729-21071783)
chr1 (38-167)||(26733587-26733716)
chr1 (97-158)||(38663173-38663234)
chr1 (27-167)||(504393-504533)
chr1 (19-78)||(38663228-38663287)
chr1 (20-156)||(17291622-17291757)
chr1 (38-146)||(3560163-3560271)
chr1 (37-157)||(6771410-6771530)
chr1 (36-124)||(35335775-35335863)
chr1 (248-298)||(38087233-38087283)
chr1 (255-304)||(7183798-7183847)
chr1 (417-466)||(16101814-16101863)
chr1 (255-307)||(1351679-1351731)
chr1 (254-298)||(10384254-10384298)
chr1 (92-156)||(34283883-34283947)
[»] chr2 (61 HSPs)
chr2 (19-167)||(37308678-37308826)
chr2 (19-158)||(9732849-9732988)
chr2 (31-167)||(7258920-7259056)
chr2 (19-167)||(7761492-7761640)
chr2 (19-167)||(17540738-17540886)
chr2 (19-167)||(26981628-26981776)
chr2 (19-167)||(42706382-42706530)
chr2 (28-167)||(16104297-16104436)
chr2 (28-158)||(18685868-18685998)
chr2 (19-167)||(16177802-16177950)
chr2 (19-167)||(19513608-19513756)
chr2 (19-167)||(33366633-33366781)
chr2 (19-167)||(33889266-33889414)
chr2 (19-167)||(34338833-34338981)
chr2 (28-167)||(35114808-35114947)
chr2 (28-155)||(40832397-40832524)
chr2 (19-167)||(2645006-2645153)
chr2 (19-167)||(32497938-32498086)
chr2 (30-140)||(32766434-32766544)
chr2 (28-158)||(44284661-44284791)
chr2 (18-167)||(3913378-3913527)
chr2 (28-167)||(30326260-30326398)
chr2 (37-167)||(5278771-5278901)
chr2 (27-167)||(28824484-28824624)
chr2 (27-158)||(6896200-6896331)
chr2 (19-156)||(30798407-30798545)
chr2 (28-167)||(12672402-12672541)
chr2 (19-167)||(39461337-39461485)
chr2 (25-167)||(38992996-38993138)
chr2 (19-167)||(41366029-41366177)
chr2 (19-167)||(42365600-42365748)
chr2 (27-158)||(10399797-10399928)
chr2 (27-158)||(38623231-38623362)
chr2 (19-158)||(40692329-40692468)
chr2 (19-140)||(27462721-27462842)
chr2 (18-158)||(11114904-11115042)
chr2 (28-167)||(4641539-4641676)
chr2 (18-158)||(30712888-30713032)
chr2 (37-142)||(8112348-8112453)
chr2 (28-167)||(2086095-2086225)
chr2 (75-158)||(12939275-12939358)
chr2 (19-83)||(37863285-37863349)
chr2 (88-167)||(9717247-9717326)
chr2 (93-167)||(37003861-37003935)
chr2 (87-167)||(26418946-26419026)
chr2 (87-158)||(1247179-1247250)
chr2 (65-156)||(13829472-13829563)
chr2 (19-74)||(9717317-9717372)
chr2 (35-109)||(18793228-18793300)
chr2 (36-167)||(26796251-26796382)
chr2 (72-167)||(41934604-41934699)
chr2 (40-142)||(15303180-15303282)
chr2 (28-158)||(18278934-18279063)
chr2 (91-140)||(40767207-40767256)
chr2 (103-152)||(45463113-45463162)
chr2 (78-150)||(36843502-36843574)
chr2 (19-67)||(37003810-37003858)
chr2 (72-158)||(38786503-38786587)
chr2 (19-84)||(45463042-45463107)
chr2 (248-304)||(10400027-10400083)
chr2 (92-156)||(18126980-18127044)
[»] chr7 (67 HSPs)
chr7 (19-158)||(43158606-43158745)
chr7 (19-167)||(10932477-10932625)
chr7 (19-167)||(36769489-36769637)
chr7 (19-167)||(47953217-47953365)
chr7 (19-158)||(38301379-38301517)
chr7 (28-158)||(47316627-47316757)
chr7 (19-167)||(18470711-18470857)
chr7 (19-167)||(11321805-11321953)
chr7 (19-167)||(18386552-18386699)
chr7 (19-167)||(21784898-21785046)
chr7 (19-167)||(26994145-26994293)
chr7 (19-158)||(1870171-1870310)
chr7 (29-167)||(40753182-40753320)
chr7 (25-157)||(329507-329639)
chr7 (19-167)||(26371729-26371877)
chr7 (19-167)||(41211120-41211268)
chr7 (28-167)||(32873698-32873837)
chr7 (19-158)||(43368237-43368376)
chr7 (25-167)||(23349217-23349359)
chr7 (19-156)||(3922623-3922760)
chr7 (18-167)||(44748722-44748871)
chr7 (18-158)||(1363672-1363812)
chr7 (19-167)||(20127316-20127464)
chr7 (19-167)||(30849166-30849314)
chr7 (18-158)||(43189161-43189301)
chr7 (19-156)||(29661361-29661498)
chr7 (19-143)||(11250668-11250792)
chr7 (19-167)||(46633724-46633867)
chr7 (27-158)||(26910338-26910469)
chr7 (30-153)||(30598939-30599062)
chr7 (30-160)||(16963172-16963302)
chr7 (19-158)||(34295331-34295463)
chr7 (19-153)||(48894758-48894892)
chr7 (19-153)||(17237117-17237251)
chr7 (19-167)||(9913552-9913699)
chr7 (19-167)||(9927240-9927387)
chr7 (19-167)||(22724451-22724599)
chr7 (27-167)||(34519535-34519675)
chr7 (27-158)||(43213853-43213984)
chr7 (30-149)||(11822268-11822387)
chr7 (19-167)||(22723952-22724100)
chr7 (19-158)||(48445557-48445696)
chr7 (38-167)||(21133399-21133528)
chr7 (19-99)||(26700572-26700652)
chr7 (27-143)||(46448572-46448688)
chr7 (67-158)||(3891994-3892085)
chr7 (28-156)||(37967012-37967140)
chr7 (88-167)||(41665564-41665643)
chr7 (92-167)||(22631765-22631840)
chr7 (95-158)||(26652902-26652965)
chr7 (67-166)||(42332087-42332186)
chr7 (65-142)||(15035219-15035296)
chr7 (87-158)||(46408925-46408995)
chr7 (92-167)||(48699425-48699500)
chr7 (248-303)||(34117349-34117404)
chr7 (95-158)||(34117488-34117551)
chr7 (27-156)||(29455777-29455906)
chr7 (87-158)||(29372767-29372838)
chr7 (87-158)||(35645483-35645553)
chr7 (253-304)||(46448797-46448848)
chr7 (255-304)||(10932728-10932777)
chr7 (255-304)||(36769740-36769789)
chr7 (255-304)||(43189414-43189463)
chr7 (36-124)||(14608331-14608419)
chr7 (274-306)||(20127161-20127193)
chr7 (108-156)||(21408635-21408683)
chr7 (127-167)||(38360098-38360138)
[»] scaffold0027 (1 HSPs)
scaffold0027 (30-167)||(15195-15332)
[»] scaffold0169 (2 HSPs)
scaffold0169 (28-167)||(17988-18127)
scaffold0169 (87-167)||(12529-12609)
[»] scaffold0208 (1 HSPs)
scaffold0208 (35-167)||(2279-2411)
[»] scaffold0054 (2 HSPs)
scaffold0054 (19-167)||(23598-23746)
scaffold0054 (20-167)||(19930-20077)
[»] scaffold0650 (1 HSPs)
scaffold0650 (27-158)||(1576-1707)
[»] scaffold0014 (1 HSPs)
scaffold0014 (19-167)||(101972-102120)
[»] scaffold0280 (1 HSPs)
scaffold0280 (19-158)||(13612-13751)
[»] scaffold0025 (2 HSPs)
scaffold0025 (27-157)||(5372-5503)
scaffold0025 (248-303)||(5608-5663)
[»] scaffold0181 (1 HSPs)
scaffold0181 (30-167)||(19028-19163)
[»] scaffold0050 (1 HSPs)
scaffold0050 (32-153)||(42888-43009)
[»] scaffold0729 (1 HSPs)
scaffold0729 (19-158)||(4504-4643)
[»] scaffold0957 (1 HSPs)
scaffold0957 (19-167)||(2421-2568)
[»] scaffold0098 (1 HSPs)
scaffold0098 (30-158)||(51471-51598)
[»] scaffold0047 (1 HSPs)
scaffold0047 (19-147)||(19081-19209)
[»] scaffold0004 (1 HSPs)
scaffold0004 (19-167)||(372889-373037)
[»] scaffold0360 (2 HSPs)
scaffold0360 (19-167)||(15298-15454)
scaffold0360 (49-158)||(13534-13643)
[»] scaffold0155 (1 HSPs)
scaffold0155 (87-167)||(33538-33617)
[»] scaffold0077 (1 HSPs)
scaffold0077 (44-167)||(7408-7534)


Alignment Details
Target: chr8 (Bit Score: 125; Significance: 4e-64; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 37618326 - 37618474
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  37618326 aacaactccagttgtccggtgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaaaggacaggacaaaaactgatatttttgtccctca 37618425  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37618426 ccaaaccacaacacaactttttgtctcacgtacaagttgttttaaatac 37618474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 40389211 - 40389065
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| || ||||    
T  40389211 aacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacaggacaaaaactgatatttttatctctca 40389112  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaat 165  Q
    |||||||||| || ||||||||||| ||| |||||||||||||||||    
T  40389111 ccaaaccacagcacaactttttgtcccacatacaagttgttttaaat 40389065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 41709948 - 41709811
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41709948 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaatgacaggacaaaaactcatatttttgtccctca 41709849  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagtt 156  Q
    |||||||||| || |||||||||||  |||||||||||    
T  41709848 ccaaaccacagcacaactttttgtccaacgtacaagtt 41709811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 8672998 - 8673137
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  8672998 agttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccac 8673097  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||| ||||||||||| |||||||||||||| | ||||||    
T  8673098 aacacaactttttgtcccacgtacaagttgtctaaaatac 8673137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 4052651 - 4052503
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||  ||||||||||||||| ||||||||||||||||    
T  4052651 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctca 4052552  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  4052551 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 4052503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 29563160 - 29563308
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||  ||||||||||||||| ||||||||||||||||    
T  29563160 aacaactctagttatccagtgtttgatttgtaaaactgtttcaggtacaggacaaactcgaggcaagggacaggacaaaaactcatatttttgtccctca 29563259  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| ||||||||||| |||||||||||||| | ||||||    
T  29563260 ccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 29563308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 6386738 - 6386599
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||||||||||||||||| |||||||||||||| || ||||||||||||||| ||| || |||||||||||| |||||||||||||||||||||||||    
T  6386738 agttgtccagtgtttgatttataaaactgtttcaggtataggacaaactggaggtaaaagataggacaaaaactcatatttttgtccctcaccaaaccac 6386639  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||| |||||||||||||||||||||||||| | ||||||    
T  6386638 aacacaactttttgtctcacgtacaagttgtctaaaatac 6386599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 27 - 158
Target Start/End: Original strand, 7591389 - 7591520
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  7591389 cagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtgcctcagcaaacca 7591488  T
Q  127 caacataactttttgtctcacgtacaagttgt 158  Q
    ||||| ||||||||||| |||||| |||||||    
T  7591489 caacacaactttttgtcacacgtataagttgt 7591520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 30542965 - 30543104
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  30542965 agttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaatggacaggacaaaaactcatatttttgtccctcaccaaaccac 30543064  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||| ||||||| ||| |||||||||||||| | ||||||    
T  30543065 aacacaacttttcgtcccacgtacaagttgtctaaaatac 30543104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 37664226 - 37664365
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  37664226 agttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccac 37664325  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | || ||||||||||| |||||||||||||| | ||||||    
T  37664326 atcacaactttttgtcccacgtacaagttgtctaaaatac 37664365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 27 - 158
Target Start/End: Complemental strand, 41548781 - 41548650
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||| ||||| || ||||    
T  41548781 cagttgtccagtgtttgatttgtaaaactgtttcagatacatgacaaactggaggcaagagacaggacaaaaactgatatttttgtacctcagcagacca 41548682  T
Q  127 caacataactttttgtctcacgtacaagttgt 158  Q
    ||||| ||||||||||| ||||||||||||||    
T  41548681 caacacaactttttgtcccacgtacaagttgt 41548650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 12753258 - 12753407
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| || |||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||| |||||||||| ||||    
T  12753258 aaacaactctagttgtccagtgtttgatttgtaagactgtttcaggtacaggacaaactgaaggcaaatgacaagacaaaaactcatatttttgttcctc 12753357  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||||||| ||||||||||| ||| |||||||||| | ||||||    
T  12753358 accaaaccacaacacaactttttgtcccacatacaagttgtctaaaatac 12753407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 15001629 - 15001500
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||    
T  15001629 cagttgtccagtgtttgatttgtaaaactgtttcagggacaggacaaactggaggcaatagacagaacaaaaactgaaatttttgtccctcaccaaacca 15001530  T
Q  127 caacataactttttgtctcacgtacaagtt 156  Q
    ||||| ||||||||||| ||||||||||||    
T  15001529 caacacaactttttgtcccacgtacaagtt 15001500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 29672257 - 29672394
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||  ||||||||||||||| ||||||||||||||||    
T  29672257 aacaactctagttgtccagtgtttgattcgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctca 29672356  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagtt 156  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  29672357 ccaaaccacaacacaactttttgtcccacgtacaagtt 29672394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 34063299 - 34063151
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||  ||||||||||||||| |||||||||||||||     
T  34063299 aacaactctagttgtccagtgtttgatttgtaaaactctttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcg 34063200  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  34063199 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 34063151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 34101679 - 34101531
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||  ||||||||| ||||||||||||||||    
T  34101679 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaacacaaaaactcatatttttgtccctca 34101580  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||||||||||||||| |  |||||||||||||| | ||||||    
T  34101579 ccaaaccacaacataacttttttttccacgtacaagttgtctaaaatac 34101531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 10467235 - 10467096
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||||||||||||||||||||||||||||| || |||||||||||||||||||||  |||| ||||||||||||||||||||| |||||    
T  10467235 aacaactctagttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagagacaagacaaaaactgatatttttgttcctca 10467136  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
     |||||||||||| ||||||||||| ||||||||||||||    
T  10467135 gcaaaccacaacacaactttttgtcccacgtacaagttgt 10467096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 14004978 - 14005126
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||||||  ||||||||||| |||||||||||||||||||| || |||||||||||||||||||||  |||| |||||||||| |||||||||||| |||    
T  14004978 aacaattttagttgtccagtatttgatttgtaaaactgtttgaggtacaggacaaactggaggcaagggacaagacaaaaactcatatttttgtccatca 14005077  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| ||||||||||| |||||||||||||| | ||||||    
T  14005078 ccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 14005126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 39643046 - 39642906
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||  |||| || ||||||||||||||||||||||||||||||||    
T  39643046 cagttgtccagtgtttgatttttaaaactgtttcaggtacaggacaaactggaggcaagggacaagataaaaactgatatttttgtccctcaccaaacca 39642947  T
Q  127 caacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||| |||||| |||| |||||||| ||||| | ||||||    
T  39642946 caacacaactttctgtcccacgtacaggttgtctaaaatac 39642906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 45446617 - 45446478
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  ||||||| ||||||| |||||||||| ||||||||||||||    
T  45446617 agttgtccagtgtttgatttgtaaaactgtttcaggtacacgacaaactggaggcaagggacaggataaaaactcatatttttgttcctcaccaaaccac 45446518  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | || ||||||||||| |||||||||||||| | ||||||    
T  45446517 agcacaactttttgtcccacgtacaagttgtctaaaatac 45446478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 30501308 - 30501178
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||||    
T  30501308 cagttgcccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaacacatatttttgtccctcaccaaacca 30501209  T
Q  127 caacataactttttgtctcacgtacaagttg 157  Q
    || || ||||||||||| |||||||||||||    
T  30501208 cagcacaactttttgtcccacgtacaagttg 30501178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 3251590 - 3251738
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||  ||||| ||||||||| ||||||||||||||||    
T  3251590 aacaactctagttgtccagtgtttgatttataaaactgtttcaggtacaggacaaactggaggcaagcgacagaacaaaaacttatatttttgtccctca 3251689  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || |||||||| ||  ||||||||||||| | ||||||    
T  3251690 ccaaaccacatcacaactttttatcctacgtacaagttgtctaaaatac 3251738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 7394748 - 7394896
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||  ||||||||||||| |||| |||||||| |||||||  |||| |||||||||| ||||||||||||||||    
T  7394748 aacaactctagttgtccagtgtttgatttacaaaactgtttcaggtacatgacaaactagaggcaagggacatgacaaaaactcatatttttgtccctca 7394847  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||| |||| |||||||||||||||||||||||||| | ||||||    
T  7394848 ccaaaccataacacaactttttgtctcacgtacaagttgtctaaaatac 7394896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 22999429 - 22999289
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  22999429 aacaactccggttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctca 22999330  T
Q  119 ccaaaccacaacataac-tttttgtctcacgtacaagttgt 158  Q
     ||||||| | || ||| |||||||| ||||||||| ||||    
T  22999329 gcaaaccatagcaaaacttttttgtcccacgtacaacttgt 22999289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 27104130 - 27103991
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||| || ||||||||||||||||||||||||| |||||||||||||||||||||  |||| |||||||||| ||||||||||||||||    
T  27104130 aacaactctagttgttcaatgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctca 27104031  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||||||||  || ||||||||||| ||||||||||||||    
T  27104030 ccaaaccactgcacaactttttgtcccacgtacaagttgt 27103991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 27 - 158
Target Start/End: Original strand, 29610997 - 29611128
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||||||| |||||||||||||||||||||||||  |||| |||||||||||||||  ||||||||||||||||| ||||||||||||| ||||||||    
T  29610997 cagttgtccaatgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggacaggacaaaaactgaaatttttgtccctcgccaaacca 29611096  T
Q  127 caacataactttttgtctcacgtacaagttgt 158  Q
    ||||| ||||||||||| |||||| |||||||    
T  29611097 caacacaactttttgtcccacgtaaaagttgt 29611128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 37862021 - 37861882
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||| || ||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||    
T  37862021 agttgttcaatgtttgattagtaaaactgtttcaggtacaggacaaactggaggcaagtgacaggacaaaaactcatatttttatccctcaccaaaccac 37861922  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | ||||||| ||||||  ||||||||||||| | ||||||    
T  37861921 atcataactatttgtcctacgtacaagttgtctaaaatac 37861882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 37474871 - 37474762
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  37474871 aacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaacttatatttttgtccctca 37474772  T
Q  119 ccaaaccaca 128  Q
     |||||||||    
T  37474771 gcaaaccaca 37474762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 13406869 - 13407017
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||| ||||||| ||||||||||||||||||| || | ||||||||||||||||   |||| ||||||||| ||||||||||||||||    
T  13406869 aacaactctagttgtctagtgtttaatttgtaaaactgtttcaggtatatgacaaactggaggcaaggaacagaacaaaaactcatatttttgtccctca 13406968  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| ||||| ||||||||||||||||||||||| | ||||||    
T  13406969 ccaaaccacagcataattttttgtctcacgtacaagttgtctaaaatac 13407017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 35225833 - 35225685
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||  ||||||||||||||||||||  ||||||||||||||||  |||||||||||||     
T  35225833 aacaactccagttgtccagtgtttggtttgtaaaacagtttcagggacaggacaaactggaggcaagggacaggacaaaaactgcaatttttgtccctcg 35225734  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| || ||||||||||| | ||||||    
T  35225733 ccaaaccacatcacaactttttgtcacaagtacaagttgtctaaaatac 35225685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 5968797 - 5968946
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| || |||||||||||||||||||||||||||||||| || |||| |||||||| |||||||  ||||||||||||||| |||||||||||| ||    
T  5968797 aaacaactctagttgtccagtgtttgatttgtaaaactgtttaaggtacatgacaaactagaggcaagggacaggacaaaaactcatatttttgtccttc 5968896  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||| || |||||||| || ||||||||| |||| | ||||||    
T  5968897 accaaaccacagcacaactttttatcccacgtacaaattgtctaaaatac 5968946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 25478414 - 25478266
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||  ||||||| ||||||| ||||||||||||||||    
T  25478414 aacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggagacaagggacaggaaaaaaactcatatttttgtccctca 25478315  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
     |||| |||| || |||||||||||  ||||||||||||| | ||||||    
T  25478314 tcaaatcacagcacaactttttgtcctacgtacaagttgtctaaaatac 25478266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 31513517 - 31513665
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||| ||||||||||||||||||||| |||||||| || | ||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  31513517 aacaactctagttatccagtgtttgatttgtaaaattgtttcaggtagatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 31513616  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || |||||||||||  | ||||||||||| | ||||||    
T  31513617 ccaaaccacagcacaactttttgtcctaggtacaagttgtctaaaatac 31513665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 32019935 - 32020083
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||  |  |||||||||||| |||||||| |||||||    
T  32019935 aacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaagcaaggggtaggacaaaaactcatatttttatccctca 32020034  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||  |||||||||||||| | ||||||    
T  32020035 ccaaaccacagcacaactttttgttccacgtacaagttgtctaaaatac 32020083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 17805851 - 17805714
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    |||| |||||||||||||||||||||||||||  ||||||||||||| |||||||  |||| |||||||||| |||||||||| ||||||||||||| |     
T  17805851 ttgttcagtgtttgatttgtaaaactgtttcaagtacaggacaaactagaggcaagggacaagacaaaaactcatatttttgttcctcaccaaaccaaag 17805752  T
Q  130 cataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || |||| ||||||||||||||||||||| | ||||||    
T  17805751 cacaactctttgtctcacgtacaagttgtctaaaatac 17805714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 10656631 - 10656759
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    ||||||||| ||||||||||||| || ||| ||| ||| |||||||| |||||||| |||||||||||||||||  ||||||||| |||| |||||||||    
T  10656631 ttgtccagtatttgatttgtaaatcttttttagagacatgacaaactagaggcaaaagacaggacaaaaactgaattttttgtccttcacaaaaccacaa 10656730  T
Q  130 cataactttttgtctcacgtacaagttgt 158  Q
    || ||||||||||||||||||||| ||||    
T  10656731 cacaactttttgtctcacgtacaaattgt 10656759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 17520765 - 17520627
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||||||||||| ||||||||||||||||| ||||| || | || || ||| |||||||||  |||||| |||||||| ||||||| ||||||||    
T  17520765 aacaactccagttgtccggtgtttgatttgtaaaagtgttttaggtgcatgataaaatggaggcaagggacagggcaaaaacttatatttt-gtccctca 17520667  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||||||||||| ||||||||||| ||| ||||||||||    
T  17520666 ccaaaccacaacacaactttttgtcccacatacaagttgt 17520627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 16485743 - 16485880
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||||| |||||||||||||||||||||||||||  |||||||  ||| |||||| || ||||||| ||||| ||||||||||  |||||||||||||     
T  16485743 aacaatttcagttgtccagtgtttgatttgtaaaatagtttcagggacatgacaaattgaaggcaaaggacagaacaaaaactgcaatttttgtccctcg 16485842  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagtt 156  Q
    |||||||||| || |||||||||||  ||||| |||||    
T  16485843 ccaaaccacagcacaactttttgtcctacgtataagtt 16485880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 45114215 - 45114078
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    |||| |||||||||||||||||||||||||||| ||||| ||||||  || ||||  || |||||||||||| ||||||||||||||||||||||||||     
T  45114215 ttgttcagtgtttgatttgtaaaactgtttcaggtacagaacaaacgagatgcaagggagaggacaaaaactcatatttttgtccctcaccaaaccacag 45114116  T
Q  130 cataactttttgtctcacgtacaagttgttttaaatac 167  Q
     | |||||||||||  | ||||||||||| | ||||||    
T  45114115 tacaactttttgtcataggtacaagttgtctaaaatac 45114078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 167
Target Start/End: Original strand, 32303588 - 32303667
Alignment:
Q  88 acaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| | ||||||    
T  32303588 acaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 32303667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 21272787 - 21272707
Alignment:
Q  87 gacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  21272787 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 21272707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 31732185 - 31732087
Alignment:
Q  69 gacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||| |||||||  |||| |||||||||| ||||||||||||||||||||||||||  | ||||||||||||||| |||||||||| | ||||||    
T  31732185 gacaaacttgaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtctcacatacaagttgtctaaaatac 31732087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 22756344 - 22756482
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| ||||||| | || ||||||||||||||||||||||| |  | |||||||| | |||||||  |||| |||||||||  | |||||| ||||||    
T  22756344 aaacaactccagttatacaatgtttgatttgtaaaactgtttctgggataggacaaatttgaggcaagagacaagacaaaaacataaatttttatccctc 22756443  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagtt 156  Q
    |  | ||||||||| |||||||||| |||||||||||||    
T  22756444 attataccacaacacaactttttgtatcacgtacaagtt 22756482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 21272829 - 21272789
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacag 68  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21272829 agttgtccagtgtttgatttgtaaaactgtttcagatacag 21272789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 248 - 304
Target Start/End: Original strand, 37618569 - 37618625
Alignment:
Q  248 tgttatgtcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    |||||||| |||||||||||| | |||||||||| ||||||||||||||||||||||    
T  37618569 tgttatgttttgtactgttatgtccagtacttaccgttttgcaaaccaaacgcaccc 37618625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 156
Target Start/End: Original strand, 16595103 - 16595220
Alignment:
Q  38 tgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaac-tgatatttttgtccctcaccaaaccacaacataact 136  Q
    |||||||||||||||  |||||| |  |||| |||||||| ||||||  |||||||||||||| ||| | ||||||||||| | || |||||||| ||||    
T  16595103 tgtttgatttgtaaat-tgtttctgggacagaacaaactgtaggcaagggacaggacaaaaacatga-agttttgtccctcgctaatccacaacacaact 16595200  T
Q  137 ttttgtctcacgtacaagtt 156  Q
    ||||||| ||||||||||||    
T  16595201 ttttgtcccacgtacaagtt 16595220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 27109532 - 27109623
Alignment:
Q  76 tggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||  |||| || |||| | ||||||||||| ||| |||||||||||||| ||||||||||| | ||||||| |||||| ||||||    
T  27109532 tggaggcaagggacatgataaaatcagatatttttgttccttaccaaaccacaacacaactttttgtcccgcgtacaaattgtttaaaatac 27109623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 32303551 - 32303597
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaa 74  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||    
T  32303551 agttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaa 32303597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 10320212 - 10320350
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    ||||||||| ||||||  | ||||||||||||||||| |||| ||  ||| |||||||| ||| |||  ||| | | |||||| || ||| || ||||||    
T  10320212 aaacaattcaagttgtataatgtttgatttgtaaaaccgttttagggacatgacaaacttgag-caagggac-gaaaaaaaacagaaattcttatccctc 10320309  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||||||||||||| ||||||||  | ||||||||||||||    
T  10320310 accaaaccacaacacaactttttaccacacgtacaagttgt 10320350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 304
Target Start/End: Complemental strand, 40388968 - 40388912
Alignment:
Q  248 tgttatgtcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    |||||||||||||||| |||| | ||||||||||  |||||||||||||||||||||    
T  40388968 tgttatgtcttgtactcttatgtccagtacttaccattttgcaaaccaaacgcaccc 40388912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 36426201 - 36426329
Alignment:
Q  37 gtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataact 136  Q
    ||||||||||||||||| || |||||| ||  ||||| || |||||||  || | |||||||||| | | |||||||  | || ||||||||||| | ||    
T  36426201 gtgtttgatttgtaaaattggttcagacac--gacaatcttgaggcaagggataagacaaaaactaaaaattttgtcatttactaaaccacaacacatct 36426298  T
Q  137 ttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||| |||||||||| | ||||||    
T  36426299 ttttgtctcacatacaagttgtctaaaatac 36426329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 156
Target Start/End: Complemental strand, 54322 - 54204
Alignment:
Q  38 tgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactt 137  Q
    ||||||||||||||||||||||| || ||| ||||| | |||  |||  |||| |||||||||  | |||||||||| |  | |||||||| || |||||    
T  54322 tgtttgatttgtaaaactgtttctgagacatgacaatccggacacaagggacatgacaaaaacataaatttttgtcctttgctaaaccacatcacaactt 54223  T
Q  138 tttgtctcacgtacaagtt 156  Q
    |||||| ||| ||||||||    
T  54222 tttgtcccacatacaagtt 54204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 15001394 - 15001340
Alignment:
Q  248 tgttatgtcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcac 302  Q
    |||| |||||||||||||| | | |||||||||| ||||||||||||||||||||    
T  15001394 tgttctgtcttgtactgttctgtccagtacttactgttttgcaaaccaaacgcac 15001340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 298
Target Start/End: Complemental strand, 45113976 - 45113933
Alignment:
Q  255 tcttgtactgttatcttcagtacttacagttttgcaaaccaaac 298  Q
    |||||||||||||| | |||||||||| ||||||||||||||||    
T  45113976 tcttgtactgttatgtccagtacttactgttttgcaaaccaaac 45113933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 158
Target Start/End: Complemental strand, 5892214 - 5892100
Alignment:
Q  44 atttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtc 143  Q
    |||||||||||| ||| ||| ||| |||||||| || | |   |||| |||||||||||| ||| |||||| |||  |||||  |||| |||||||||||    
T  5892214 atttgtaaaactattttagagacatgacaaactagacgaacgagacaagacaaaaactgaaattattgtccttcattaaaccgtaacacaactttttgtc 5892115  T
Q  144 tcacgtacaagttgt 158  Q
     |||||| |||||||    
T  5892114 acacgtataagttgt 5892100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 45446375 - 45446326
Alignment:
Q  255 tcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    |||||||||||| | | |||||||||| |||||||||||||||| |||||    
T  45446375 tcttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccc 45446326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 38047517 - 38047481
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaact 55  Q
    ||||| || ||||||||||||||||||||||||||||    
T  38047517 aacaactctagttgtccagtgtttgatttgtaaaact 38047481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 2e-59; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 51925121 - 51925269
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  51925121 aacaactccagttgtccagtgtttaatttgtaaaactgtttcaggtacatgacaaactggaggcaaaggacaggacaaaaactgatatttttgtccctca 51925220  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  51925221 ccaaaccacaacacaactttttgtcccacgtacaagttgtttttaatac 51925269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 29585047 - 29584899
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  29585047 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagtgacaggacaaaaactcatatttttgtccctca 29584948  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| ||||||||||| |||||||||||||| | ||||||    
T  29584947 ccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 29584899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 49748824 - 49748972
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  49748824 aacaactcaagttgtttagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacatgacaaaaactgatatttttgtccctca 49748923  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  49748924 ccaaaccacaacacaactttttgtcccacgtacaagttgttttaaatac 49748972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 50678970 - 50678822
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  50678970 aacaattcaagttgtccagtgtttgatttgaaaaactgtttcaggtacaggacaaactggaggcaaagaacaggacaaaaactgatatttttgtctctca 50678871  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  50678870 ccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatac 50678822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 28675962 - 28675814
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  || |||||||||||| ||||||||||||||||    
T  28675962 aacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggataggacaaaaactcatatttttgtccctca 28675863  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| ||||||||||| |||||||||||||| | ||||||    
T  28675862 ccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 28675814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 25860334 - 25860482
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||| |||||||||| ||||||||||||||||    
T  25860334 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctca 25860433  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || |||||||||||||||||||||||||| | ||||||    
T  25860434 ccaaaccacatcacaactttttgtctcacgtacaagttgtctaaaatac 25860482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 1344620 - 1344768
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||    
T  1344620 aacaactctagttgtccagtgtttgatttgtaaaactatttcaggtacaggacaaactggaggcaagggacaggacagaaactcatatttttgtccctca 1344719  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || |||||||||||||||||||||||||| | ||||||    
T  1344720 ccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaatac 1344768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 12349084 - 12349232
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||| ||||    
T  12349084 aacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtctctca 12349183  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || |||||| |||| |||||||||||||| | ||||||    
T  12349184 ccaaaccacagcacaactttatgtcccacgtacaagttgtctaaaatac 12349232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 51259693 - 51259841
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  51259693 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 51259792  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||  || ||||||||||| |||||||||||||| | ||||||    
T  51259793 ccaaaccacggcacaactttttgtcccacgtacaagttgtctaaaatac 51259841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 3864597 - 3864736
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  3864597 agttgtccggtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaaaggacaggacaaaaactcatatttttgtccctcgccaaaccac 3864696  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||| ||||||||||| |||||||||||||| | ||||||    
T  3864697 aacacaactttttgtcccacgtacaagttgtctaaaatac 3864736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 31882935 - 31883074
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||| ||||||||||||||||||||| |||||    
T  31882935 aacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacacgacaaaaactgatatttttgtgcctca 31883034  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
     ||||||||| || ||||||||||| ||||||||||||||    
T  31883035 gcaaaccacagcacaactttttgtcccacgtacaagttgt 31883074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 27 - 158
Target Start/End: Original strand, 33364699 - 33364830
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||| |||||| |||||||    
T  33364699 cagttgtccagtgttttatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgcccctcagcaaacca 33364798  T
Q  127 caacataactttttgtctcacgtacaagttgt 158  Q
    || || ||||||||||||||||||||||||||    
T  33364799 catcacaactttttgtctcacgtacaagttgt 33364830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 24571454 - 24571305
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| || ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  24571454 aaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctc 24571355  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||| || ||||||||||| || ||||||||||| | ||||||    
T  24571354 accaaaccacagcacaactttttgtcccatgtacaagttgtctaaaatac 24571305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 39052750 - 39052899
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| || ||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||  ||||||||||||||| ||||||||||| |||    
T  39052750 aaacaactctagttgtctagtgtttgatttgtaaaactgtttcaggcacaggacaaactggaggcaatggacaggacaaaaactcatatttttgtctctc 39052849  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||||||| ||||||||||| |||||||||||||| | ||||||    
T  39052850 accaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 39052899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 19906935 - 19906795
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| | ||||||||||||||||||||||||||| ||||||||  |||| |||||||||||||||  ||||||||||||||||| |||||||||||||    
T  19906935 aaacaacttcagttgtccagtgtttgatttgtaaaattgtttcagggacagaacaaactggaggcaagggacaggacaaaaactgaaatttttgtccctc 19906836  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  19906835 accaaaccacagcacaactttttgtctcacgtacaagttgt 19906795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 20609561 - 20609709
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||| ||||||||||||||||    
T  20609561 aacaactctagttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaaactggtggcaagggacaggacaaaaactcatatttttgtccctca 20609660  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  20609661 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 20609709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 21221274 - 21221421
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||| | ||||||||||||||||||||||| |||||||||| ||||||||||  ||||||||||||||| ||||||||||||||||    
T  21221274 aacaactctagttgtccaatatttgatttgtaaaactgtttcaggtacaggacaa-ctggaggcaagggacaggacaaaaactcatatttttgtccctca 21221372  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  21221373 ccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatac 21221421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 21374094 - 21373954
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||  |||||||||||| || ||||||||||||||||||||||||    
T  21374094 cagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaacttgaggcaagggacaggacaaaatctcatatttttgtccctcaccaaacca 21373995  T
Q  127 caacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||| ||||||||||| |||||||||||||| | ||||||    
T  21373994 caacacaactttttgtcccacgtacaagttgtctaaaatac 21373954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 40094675 - 40094527
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  40094675 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacagaacaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 40094576  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || |||||||||| |||||||||| |||| | ||||||    
T  40094575 ccaaaccacatcacaactttttgtttcacgtacaaattgtctaaaatac 40094527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 42636316 - 42636464
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||||||| |||||||||||||||||||||||||||||||| || || ||||||||||||||||||  ||||| ||||||||| ||||||||||||||||    
T  42636316 aacaattctagttgtccagtgtttgatttgtaaaactgttttaggtataggacaaactggaggcaagggacagaacaaaaactcatatttttgtccctca 42636415  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  42636416 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 42636464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 29646239 - 29646090
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||||||||||||| ||||||||||||||||||||||||| || |||| || |||||||||||||  || |||||||||||  |||||||||||||||    
T  29646239 aaacaattccagttgttcagtgtttgatttgtaaaactgttttaggtacacgataaactggaggcaagggataggacaaaaacatatatttttgtccctc 29646140  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||| || ||||||||||| |||||||||||||||| ||||||    
T  29646139 accaaaccacatcacaactttttgtcccacgtacaagttgtttaaaatac 29646090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 51296742 - 51296605
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  51296742 ttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaa 51296643  T
Q  130 cataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || || ||||||||  | ||||||||||| | ||||||    
T  51296642 cacaattttttgtcctaagtacaagttgtctaaaatac 51296605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 25927240 - 25927388
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |    
T  25927240 aacaactctagttgtctaatgtttgatttgtaaaactgtttcaaatacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctta 25927339  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||| ||||||| ||||||||||| |||||||||||||| | ||||||    
T  25927340 ccaaaacacaacacaactttttgtcccacgtacaagttgtctaaaatac 25927388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 44117111 - 44116963
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  44117111 aacaactctagttgtccagtgtttgatttgtaaaaccgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 44117012  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
     ||||||||  || ||||||||||| |||||||||||||| | ||||||    
T  44117011 tcaaaccactgcacaactttttgtcccacgtacaagttgtctaaaatac 44116963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 47958345 - 47958493
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||  ||||||||||||||| ||||||||||||||||    
T  47958345 aacaactctagttgtccagtgtttgatttgtaaaattgtttcaggtacaggaaaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 47958444  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||| ||| || ||||||||||| |||||||||||||| | ||||||    
T  47958445 ccaaactacagcacaactttttgtcccacgtacaagttgtctaaaatac 47958493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 19 - 153
Target Start/End: Complemental strand, 2135242 - 2135108
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||  ||||| ||||||||| ||||||||||||||||    
T  2135242 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacagaacaaaaactcatatttttgtccctca 2135143  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaa 153  Q
    |||||||||| || ||||||||||| |||||||||    
T  2135142 ccaaaccacagcacaactttttgtcccacgtacaa 2135108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 34026828 - 34026691
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    |||| |||||||||||||||||||||||||||| || ||||||||||||||||||  |||| |||||||||| |||||||||||||||||||||||||||    
T  34026828 ttgttcagtgtttgatttgtaaaactgtttcaggtataggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacaa 34026729  T
Q  130 cataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || || |||||||| |||||||||||||| | ||||||    
T  34026728 cacaattttttgtcccacgtacaagttgtctaaaatac 34026691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 20255216 - 20255069
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   |||||||||||||| ||||||||||||||||    
T  20255216 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaggaacaggacaaaaactcatatttttgtccctca 20255117  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||| ||||| ||| |||||||||| | ||||||    
T  20255116 ccaaaccacagcacaacttcttgtcccac-tacaagttgtctaaaatac 20255069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 38213526 - 38213378
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||||||||||||||||||||||| |||||||| || ||||||| ||||||||||  ||||||||||||||| ||||||||||| ||||    
T  38213526 aacaactctagttgtccagtgtttgatttgtaaaattgtttcaggtataggacaatctggaggcaagagacaggacaaaaactcatatttttgtcactca 38213427  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | ||||||||||| ||||||||||| |||||||||||||| | ||||||    
T  38213426 cgaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 38213378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 50386369 - 50386508
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||  |||| |||||||| |||||||||||| |||||    
T  50386369 aacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacatgacaaaaattgatatttttgtgcctca 50386468  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
     ||||||||| || |||||||||||  |||||||||||||    
T  50386469 acaaaccacagcacaactttttgtcctacgtacaagttgt 50386508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 53557717 - 53557856
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||| || |||||||||||||||||||||| || |||||||||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||    
T  53557717 agttgttcaatgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaatggacaggacaaaaactcatagttttgtccctcaccaaaccac 53557816  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
      || |||||||||||||||||||||||||| | ||||||    
T  53557817 tgcacaactttttgtctcacgtacaagttgtctaaaatac 53557856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 41682965 - 41683078
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||| |||||||||||||| |||||||||||    
T  41682965 aaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaagacaaaaactgatacttttgtccctc 41683064  T
Q  118 accaaaccacaaca 131  Q
    | ||||||||||||    
T  41683065 agcaaaccacaaca 41683078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 413 - 496
Target Start/End: Complemental strand, 7685368 - 7685285
Alignment:
Q  413 aacagtggcaaaattcgccttccgctaggaacctcaacactaactgctcttacaaccaagctacgtccgtcaacatgaacacca 496  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7685368 aacagtggcaaaattcgccttccgctaggaacctcaacattaactgctcttacaaccaagctacgtccgtcaacatgaacacca 7685285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 4851371 - 4851517
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||||||||||||||||||||||||||||| || |||| |||||  |||||||||  |||||||||||||||   ||||||||||||||    
T  4851371 aacaactctagttgtccagtgtttgatttgtaaaactgttttaggtacaagacaatttggaggcaagggacaggacaaaaact--catttttgtccctca 4851468  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||| |||||||| ||||||||||| |||||||||||||| | ||||||    
T  4851469 ccaacccacaacacaactttttgtcccacgtacaagttgtctaaaatac 4851517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 3964452 - 3964312
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||||||||||||||||||||||||||||||||   ||| |||||| |||||||||   || ||||||||||||| ||||||||||||||||||||||    
T  3964452 cagttgtccagtgtttgatttgtaaaactgtttcatggacatgacaaattggaggcaaggaactggacaaaaactgaaatttttgtccctcaccaaacca 3964353  T
Q  127 caacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || || ||||||||||| || ||||||||||| | ||||||    
T  3964352 cagcacaactttttgtcccatgtacaagttgtctaaaatac 3964312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 3867562 - 3867699
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||  |||| ||| ||||||| |||  |||| ||||||| |||| ||||||||||||||    
T  3867562 aacaactccagttgtccggtgtttgatttgtaaaactgtttcagggacagaacatactggagacaagagacatgacaaaacctgaaatttttgtccctca 3867661  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagtt 156  Q
    |||||||||| || |||||||||||  |||||||||||    
T  3867662 ccaaaccacagcacaactttttgtcctacgtacaagtt 3867699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 6179599 - 6179467
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgt-ccct 116  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| ||  ||||||||||||||||  |||||||| ||||    
T  6179599 aaacaactccagttgtccagtgtttgatttgtaaaacagtttcagaaacaggtcaaactggaggtaagggacaggacaaaaactgtaatttttgtcccct 6179500  T
Q  117 caccaaaccacaacataactttttgtctcacgt 149  Q
    | |||||||||| || ||||||||||| |||||    
T  6179499 cgccaaaccacagcacaactttttgtcacacgt 6179467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 27 - 167
Target Start/End: Original strand, 45690827 - 45690962
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||||||||||||||||||| ||||||||||||| ||||||| ||| |||||||||| |||||||||||||||||||||||| ||||||     ||||    
T  45690827 cagttgtccagtgtttgatttgcaaaactgtttcaggtacaggataaattggaggcaaaggacaggacaaaaactgatatttttctccctc-----acca 45690921  T
Q  127 caacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || || |||||||||||||||| | ||||||| | ||||||    
T  45690922 cagcacaactttttgtctcacgcataagttgtctaaaatac 45690962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 24721657 - 24721518
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||| ||||||||||||||||||||||||||||  |||| |||||||||||| ||| ||||||||||||||| | ||||| || |||||    
T  24721657 aacaactctagttgttcagtgtttgatttgtaaaactgtttcagggacagaacaaactggaggtaaaggacaggacaaaaactaaaattttggtacctca 24721558  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
     |||||||||||| |||||||| || ||| ||||||||||    
T  24721557 acaaaccacaacacaactttttatcccacatacaagttgt 24721518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 54622709 - 54622857
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| | ||||||||| || ||||||||||||||||||||||| ||| | |||||||  | ||||  ||||||||||||||| ||||||||||| |||    
T  54622709 aaacaacttcagttgtccggtatttgatttgtaaaactgtttcaggtactg-acaaactaaatgcaagggacaggacaaaaactcatatttttgtcgctc 54622807  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || ||||||||||| |||||||| || |||||||||||||| | ||||||    
T  54622808 acgaaaccacaacacaactttttatcccacgtacaagttgtctaaaatac 54622857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 10747373 - 10747263
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||||| ||||||| ||||||||||||||||||||| ||| || ||||||||||||||||| |||  || ||||||||||||||||||||||| | ||    
T  10747373 aaacaatttcagttgttcagtgtttgatttgtaaaactattttaggtacaggacaaactggagacaagagataggacaaaaactgatatttttgttcgtc 10747274  T
Q  118 accaaaccaca 128  Q
    | |||||||||    
T  10747273 agcaaaccaca 10747263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 158
Target Start/End: Complemental strand, 52300598 - 52300470
Alignment:
Q  29 gttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccaca 128  Q
    |||||||| |||||||||  ||||||||||||||| || |||||||||| ||| ||  ||||||||||||||||| |||||||||| |||||||||||||    
T  52300598 gttgtccaatgtttgattcataaaactgtttcagagacgggacaaactgcaggtaagggacaggacaaaaactgaaatttttgtccatcaccaaaccaca 52300499  T
Q  129 acataactttttgtctcacgtacaagttgt 158  Q
    ||  || |||||||| || |||||||||||    
T  52300498 acgcaattttttgtccca-gtacaagttgt 52300470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 22484656 - 22484804
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||| |||||||||| |||||||||||||| |||||||  ||| ||||||||||||||||  |||| ||||||| ||   |||||||| |||      
T  22484656 aacaactccaattgtccagtgattgatttgtaaaacagtttcagggacatgacaaactggaggcaagggacatgacaaaagctacaatttttgttccttg 22484755  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||| |||||| ||||||||||| |||||| ||||||| | ||||||    
T  22484756 ccaaactacaacacaactttttgtcccacgtataagttgtctaaaatac 22484804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 3695219 - 3695302
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaact 101  Q
    |||||| || |||||||||||||||||||||||||||||||| || |||| ||||||||||||||||  |||||||||||||||    
T  3695219 aaacaactctagttgtccagtgtttgatttgtaaaactgttttaggtacatgacaaactggaggcaagggacaggacaaaaact 3695302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 41 - 158
Target Start/End: Original strand, 34351303 - 34351420
Alignment:
Q  41 ttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataacttttt 140  Q
    ||||||||||||||||||||||  ||| |||||||| |||| ||  |||| |||||||||  | ||| |||||||||| |||||||||||| ||||||||    
T  34351303 ttgatttgtaaaactgtttcagggacatgacaaactagaggaaatagacacgacaaaaacaaaaattattgtccctcatcaaaccacaacacaacttttt 34351402  T
Q  141 gtctcacgtacaagttgt 158  Q
    ||| ||| ||||||||||    
T  34351403 gtcgcacatacaagttgt 34351420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 26282315 - 26282448
Alignment:
Q  37 gtgtttgatttgtaaaactgtt---tcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacata 133  Q
    ||||||||||||||||||| ||   | || |||| ||||||||||||| ||  ||| ||||||||||| ||||||||||| |||| ||||||||| || |    
T  26282315 gtgtttgatttgtaaaactattatttaaggtacaagacaaactggaggtaagagacgggacaaaaacttatatttttgtctctcatcaaaccacagcaca 26282414  T
Q  134 actttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| |||||| ||||||| | ||||||    
T  26282415 actttttgtcccacgtataagttgtctaaaatac 26282448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 41 - 167
Target Start/End: Original strand, 39215404 - 39215530
Alignment:
Q  41 ttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataacttttt 140  Q
    |||||||||||||||||||||   ||||||||||| ||||| ||  |||| |||||||||||| ||||||  |||| ||| ||||| | ||||| |||||    
T  39215404 ttgatttgtaaaactgtttcaagaacaggacaaaccggaggtaagggacaagacaaaaactgaaatttttaccccttaccgaaccaaatcataatttttt 39215503  T
Q  141 gtctcacgtacaagttgttttaaatac 167  Q
    ||| |||||||||||||| | ||||||    
T  39215504 gtcccacgtacaagttgtctaaaatac 39215530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 5442451 - 5442386
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaa 84  Q
    ||||| || ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  5442451 aacaactctagttgtccagtgtttgatttgtaaagctgtttcaggtacaagacaaactggaggcaa 5442386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 304
Target Start/End: Original strand, 51925364 - 51925420
Alignment:
Q  248 tgttatgtcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    ||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||    
T  51925364 tgttatgtcttgtactgttatatccagtacttaccgttttgcaaaccaaacgcaccc 51925420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 167
Target Start/End: Complemental strand, 25954555 - 25954474
Alignment:
Q  86 tgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||| |||||||||| ||||||||||| |||||||||  ||| || ||||||||||||||| || ||||||||| ||||||    
T  25954555 tgacacgacaaaaactcatatttttgtctctcaccaaattacagcacaactttttgtctcacatataagttgtttaaaatac 25954474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 53046605 - 53046666
Alignment:
Q  40 tttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaact 101  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||  |||||||||||||||    
T  53046605 tttgatttgtaaaactgtttcaggtataggacaaactggaggtaagggacaggacaaaaact 53046666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 43175647 - 43175589
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactg 77  Q
    ||||| || |||||||||||||||||||||||||||| |||||| || |||||||||||    
T  43175647 aacaactctagttgtccagtgtttgatttgtaaaactatttcaggtataggacaaactg 43175589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 30259025 - 30258909
Alignment:
Q  38 tgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactt 137  Q
    |||||||||||||||| ||||||| | |||||| ||||| |||||||  | || |||||||||||| |||| ||| || ||| ||||||||| | |||      
T  30259025 tgtttgatttgtaaaattgtttcaaagacaggataaactcgaggcaatgggcaagacaaaaactgaaatttgtgtaccccactaaaccacaatacaac-g 30258927  T
Q  138 tttgtctcacgtacaagt 155  Q
    || |||||||||||||||    
T  30258926 ttggtctcacgtacaagt 30258909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 167
Target Start/End: Complemental strand, 26847482 - 26847350
Alignment:
Q  36 agtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataac 135  Q
    ||||||| |||||||||||||||| ||  | |  ||||| |||||||||  ||||||||||||||||| |||  ||||||| |  ||| ||||||| |||    
T  26847482 agtgtttaatttgtaaaactgtttaagtgatataacaaattggaggcaagagacaggacaaaaactgaaattcatgtcccttataaaatcacaacaaaac 26847383  T
Q  136 -tttttgtctcacgtacaagttgttttaaatac 167  Q
     |||||||| ||| |||||||||| | ||||||    
T  26847382 ttttttgtcccacatacaagttgtctaaaatac 26847350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 156
Target Start/End: Complemental strand, 44000424 - 44000296
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||| | |||||| ||||||||||||||||  |  | | || |||||  ||||||| |||| ||||||||| ||  ||||| |||||||| |||||||    
T  44000424 agttgtaccgtgtttcatttgtaaaactgtttttgggaaatgataaactcaaggcaaaggacatgacaaaaacagaattttttttccctcactaaaccac 44000325  T
Q  128 aacataactttttgtctcacgtacaagtt 156  Q
    | || || |||||||| ||||||||||||    
T  44000324 atcacaattttttgtcccacgtacaagtt 44000296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 297
Target Start/End: Original strand, 3867809 - 3867849
Alignment:
Q  257 ttgtactgttatcttcagtacttacagttttgcaaaccaaa 297  Q
    |||||||||||| |||||||||||| |||||||||||||||    
T  3867809 ttgtactgttatgttcagtacttactgttttgcaaaccaaa 3867849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 5442376 - 5442328
Alignment:
Q  106 tttttgtccctcaccaaaccacaacataactttttgtctcacgtacaag 154  Q
    |||||||||||||||||| |||| || ||||||||||| ||||||||||    
T  5442376 tttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaag 5442328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 14155442 - 14155512
Alignment:
Q  87 gacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||| |||||||||||| |||||  |||||||| ||| || |||| |||||||||||||| |||||||||||    
T  14155442 gacatgacaaaaactgaaatttta-tccctcactaaatcataacacaactttttgtctcaagtacaagttgt 14155512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 51259944 - 51260003
Alignment:
Q  255 tcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcacccgtagagtttt 314  Q
    |||||||||||| | | |||||||||| |||||||||||||||| |||||  ||||||||    
T  51259944 tcttgtactgttctatccagtacttactgttttgcaaaccaaacacaccctaagagtttt 51260003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 109 - 167
Target Start/End: Complemental strand, 44267824 - 44267766
Alignment:
Q  109 ttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||| |||||||||||||||||||||| || ||| ||||| |||| | ||||||    
T  44267824 ttgtccctcgccaaaccacaacataactttttatcccacatacaaattgtctaaaatac 44267766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 42547371 - 42547420
Alignment:
Q  107 ttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagtt 156  Q
    ||||||| || || |||| |||||| ||||||||||||||||||||||||    
T  42547371 ttttgtctcttactaaactacaacacaactttttgtctcacgtacaagtt 42547420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 3695301 - 3695353
Alignment:
Q  115 ctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||||||| || ||| ||||||| |||||||||||||| | ||||||    
T  3695301 ctcaccaaaccacatcacaaccttttgtcccacgtacaagttgtctaaaatac 3695353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 257 - 305
Target Start/End: Original strand, 20609799 - 20609847
Alignment:
Q  257 ttgtactgttatcttcagtacttacagttttgcaaaccaaacgcacccg 305  Q
    |||||||||| | | |||||||||| |||||||||||||||| ||||||    
T  20609799 ttgtactgttctgtccagtacttactgttttgcaaaccaaacacacccg 20609847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 22484906 - 22484954
Alignment:
Q  255 tcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcacc 303  Q
    |||| ||||||||| | |||||||||| |||||||||||||||| ||||    
T  22484906 tcttatactgttatgtccagtacttactgttttgcaaaccaaacacacc 22484954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 5e-57; HSPs: 92)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 44324254 - 44324402
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||    
T  44324254 aacaactccagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaaaagacgggacaaaaactgatatttttgtccctca 44324353  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||||||||||||    
T  44324354 ccaaaccacagcacaactttttgtcccacgtacaagttgttttaaatac 44324402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 38812694 - 38812546
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  38812694 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 38812595  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| ||||||||||| |||||||||||||| | ||||||    
T  38812594 ccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 38812546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 33176944 - 33177092
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  33176944 aacaattttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 33177043  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| ||||||||||| |||| ||||||||| | ||||||    
T  33177044 ccaaaccacaacacaactttttgtcccacgcacaagttgtctaaaatac 33177092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 52949895 - 52949755
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| || ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  52949895 aaacaactctagttgtccagtgtttcatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctc 52949796  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    | |||||||||||| ||||||||||| ||||||||||||||    
T  52949795 agcaaaccacaacacaactttttgtcccacgtacaagttgt 52949755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 23522055 - 23521906
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||  || |||||||||||| |||||||||||||||    
T  23522055 aaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaagcaagggataggacaaaaactcatatttttgtccctc 23521956  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||||||| ||||||||||| |||||||||||||| | ||||||    
T  23521955 accaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 23521906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 24002513 - 24002365
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  24002513 aacaactctagttgtccagtgtttgatttgtaaaacagtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 24002414  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  24002413 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 24002365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 46680422 - 46680570
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||||||||||| |    
T  46680422 aacaattctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctta 46680521  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||||||||||||| |||| | ||||||    
T  46680522 ccaaaccacagcacaactttttgtctcacgtacaaattgtctaaaatac 46680570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 20802452 - 20802591
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  20802452 agttatccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccac 20802551  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | || ||||||||||| |||||||||||||| | ||||||    
T  20802552 atcacaactttttgtcccacgtacaagttgtctaaaatac 20802591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 21202913 - 21202774
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||||||||||||||||||||||||||||| || |||||||||||||||||||||  ||||||||||||||| ||| ||||||||||||    
T  21202913 aacaactctagttgtccagtgtttgatttgtaaaactgtttaaggtacaggacaaactggaggcaagagacaggacaaaaactcataattttgtccctca 21202814  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  21202813 ccaaaccacaacacaactttttgtcccacgtacaagttgt 21202774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 44649076 - 44649215
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  44649076 aacaactccagttatccagtttttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctca 44649175  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
     |||||||||||| ||||||||||| || |||||||||||    
T  44649176 gcaaaccacaacacaactttttgtcccatgtacaagttgt 44649215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 21580200 - 21580052
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||||||| | ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||  ||||||||||||||| ||||||||||||||||    
T  21580200 aacaattctaattgtccagtatttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctca 21580101  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||||||||||||| |||| | ||||||    
T  21580100 ccaaaccacatcacaactttttgtctcacgtacaaattgtctaaaatac 21580052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 29785449 - 29785597
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||  ||||| ||||||||| ||||||||||||||||    
T  29785449 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagggacagaacaaaaactcatatttttgtccctca 29785548  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| | ||||||||| |||||||||||||| | ||||||    
T  29785549 ccaaaccacaacacagctttttgtcccacgtacaagttgtctaaaatac 29785597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 38486169 - 38486308
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||  |||| |||||||||| ||||||||||||||||    
T  38486169 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaagggacatgacaaaaactcatatttttgtccctca 38486268  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||||||||| || |||||||||||| |||||||||||||    
T  38486269 ccaaaccacagcacaactttttgtctaacgtacaagttgt 38486308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 52319497 - 52319358
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||| ||||||||||||||||    
T  52319497 aacaactctagttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacgaaaactcatatttttgtccctca 52319398  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||||||||| || ||||||||||| ||||||||||||||    
T  52319397 ccaaaccacagcacaactttttgtcccacgtacaagttgt 52319358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 56154786 - 56154647
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||  ||||| ||||||||| |||||||||||||||||||||||||    
T  56154786 agttgtccagtgtttgatttgtaaaactgtttcaggtacaggaaaaactggaggcaagggacagaacaaaaactcatatttttgtccctcaccaaaccac 56154687  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | || ||||||||||| |||||||||||||| | ||||||    
T  56154686 agcacaactttttgtcccacgtacaagttgtctaaaatac 56154647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 36886107 - 36885958
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| || ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  36886107 aaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctc 36886008  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||| || |||||||| || ||||||||| |||| | ||||||    
T  36886007 accaaaccacagcacaactttttatcccacgtacaaattgtctaaaatac 36885958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 2629863 - 2630011
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||| |||| |||||||||| ||||||||||||||||    
T  2629863 aacaactctagttgtcccgtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaaaggacatgacaaaaactcatatttttgtccctca 2629962  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||| |||| | || |||||||||||||||||||||||||| | ||||||    
T  2629963 ccagaccaaatcacaactttttgtctcacgtacaagttgtctaaaatac 2630011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 2725045 - 2725192
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||||||||||||||||||||||||| ||| || |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  2725045 aacaactctagttgtccagtgtttgatttgtaaaactcttttaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 2725144  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  2725145 ccaaaccacatcacaactttttgtc-cacgtacaagttgtctaaaatac 2725192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 12601060 - 12600912
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||  ||  |||| |||||||||| ||||||||||||||||    
T  12601060 aacaactctagttgtccagtgtttgatttgtaaaacagtttcaggtacaggacaaactggagataagggacaagacaaaaactcatatttttgtccctca 12600961  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
     |||||||||||| |||||||||||||||||||||||||| | ||||||    
T  12600960 tcaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatac 12600912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 20694545 - 20694397
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||| |||||||||||||||| || |||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||    
T  20694545 aacaactctagttgtccagtgtttaatttgtaaaactgttttaggtacaggacaaactgaaggcaaaggacaggacaaaaactcatatttttgtccctca 20694446  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||  |||||||||||  ||||||||||||| | ||||||    
T  20694445 ccaaaccacaacgcaactttttgtccaacgtacaagttgtctaaaatac 20694397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 36497392 - 36497252
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||  ||||||||||||||| |||||||||||||||    
T  36497392 aaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagagacaggacaaaaactcatatttttgtccctc 36497293  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||||||||| || |||||||||||  || ||||||||||    
T  36497292 accaaaccacatcacaactttttgtccaacatacaagttgt 36497252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 27 - 158
Target Start/End: Original strand, 50178412 - 50178544
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  50178412 cagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtgcctcagcaaacca 50178511  T
Q  127 caacataac-tttttgtctcacgtacaagttgt 158  Q
    || || ||| |||||||| ||||||||||||||    
T  50178512 cagcacaacttttttgtcccacgtacaagttgt 50178544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 50727825 - 50727973
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||| ||||||||||||||||||||||||||| |||| ||||||||| ||||||  ||||||||||||||| ||||||||||||||||    
T  50727825 aacaactctagttgtcaagtgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaagggacaggacaaaaactcatatttttgtccctca 50727924  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
     |||||||||||| ||||||||||| |||||||||||||| | ||||||    
T  50727925 tcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 50727973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 50735839 - 50735987
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||| ||||||||||||||||||||||||||| |||| ||||||||| ||||||  ||||||||||||||| ||||||||||||||||    
T  50735839 aacaactctagttgtcaagtgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaagggacaggacaaaaactcatatttttgtccctca 50735938  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
     |||||||||||| ||||||||||| |||||||||||||| | ||||||    
T  50735939 tcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 50735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 1231485 - 1231346
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||  ||| ||||||||||| ||||||||||||||||    
T  1231485 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaagagactggacaaaaactcatatttttgtccctca 1231386  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    | |||||||| || ||||||||||| ||||||||||||||    
T  1231385 caaaaccacagcacaactttttgtcccacgtacaagttgt 1231346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 47642403 - 47642542
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||| ||  |||| || ||||||||||||||||||||||||    
T  47642403 aacaactccagttgttcagtgtttgatttgtaaaactgtttcaggcacaggacaaactggaggtaagagacaagataaaaactgatatttttgtccctca 47642502  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
     |||||||||||| ||||||||||| ||||||||||||||    
T  47642503 gcaaaccacaacacaactttttgtcccacgtacaagttgt 47642542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 11056217 - 11056083
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||| |||||||||||||||||||||||||     
T  11056217 aaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactgatatttttgtccctt 11056118  T
Q  118 accaaaccacaacataactttttgtctcacgtaca 152  Q
    |||||||||||||| |||||| |||| || |||||    
T  11056117 accaaaccacaacacaactttatgtcccatgtaca 11056083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 16320693 - 16320555
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||||||||||||| |||||||||||||||||| |||| || |||| |||||||||||||  ||||||| ||||||||||||||||||||||||    
T  16320693 aacaactccagttgtccagtatttgatttgtaaaactgtctcaggtataggaaaaactggaggcaagggacaggataaaaactgatatttttgtccctca 16320594  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttg 157  Q
    ||||||||||||| ||||||||||| |||||||| ||||    
T  16320593 ccaaaccacaacacaactttttgtcccacgtacaggttg 16320555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 24210482 - 24210345
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||| ||||||||||||||||||||     
T  24210482 ttgtccggtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatattattgtccctcaccaaaccacag 24210383  T
Q  130 cataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || |||||||| || |||||||||||||| | ||||||    
T  24210382 cacaactttttatcccacgtacaagttgtctaaaatac 24210345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 33552753 - 33552902
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| || |||||| |||||||||||||||||||||||||||| ||||||||||| |||| ||||  |||| |||||||||| |||||||||||||||    
T  33552753 aaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaattggatgcaagggacaagacaaaaactcatatttttgtccctc 33552852  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  33552853 accaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 33552902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 9512252 - 9512400
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||| |||||||||||||||||||||||||||| |||| || ||||||||||||| | |||||||||||||| |||||||||||| |||    
T  9512252 aacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagataaactggaggcaagtaacaggacaaaaactcatatttttgtccttca 9512351  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  9512352 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 9512400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 20517934 - 20518082
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||||||| | ||||||||||||||||    
T  20517934 aacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagagacaggacaaaaagtcatatttttgtccctca 20518033  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||| |||| |||||||| ||||| |||||||||||||| | ||||||    
T  20518034 ccaaatcacagcataacttcttgtcccacgtacaagttgtctaaaatac 20518082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 37865927 - 37865779
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||  |||| |||||||||| ||||||||||||||||    
T  37865927 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaatctggaggcaagagacatgacaaaaactcatatttttgtccctca 37865828  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||| ||||||| ||||||||||| || ||||||||||| | ||||||    
T  37865827 ccaaatcacaacacaactttttgtcccatgtacaagttgtctaaaatac 37865779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 41712021 - 41711873
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||  ||||||||||| ||| ||||||||||||||||    
T  41712021 aacaactctagttgtccagtgtttgatttgtaaagctgtttcaggtacaggacaaactgaaggcaagggacaggacaaagactcatatttttgtccctca 41711922  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||  | |||||||||||||||||||| ||||| | ||||||    
T  41711921 ccaaaccacagtacaactttttgtctcacgtacaggttgtctaaaatac 41711873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 27 - 167
Target Start/End: Original strand, 50729462 - 50729602
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    ||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||  |||| |||||||||||| |||||||||  |||||||||||    
T  50729462 cagttgtccagtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggacatgacaaaaactgaaatttttgtctatcaccaaacca 50729561  T
Q  127 caacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || || |||||||||||||||||||||||||| | ||||||    
T  50729562 cagcacaactttttgtctcacgtacaagttgtctaaaatac 50729602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 35 - 158
Target Start/End: Original strand, 55065260 - 55065384
Alignment:
Q  35 cagtgtttgatttgtaaaactgtttcagatacaggacaaactggagg-caaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacata 133  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||| |||  ||||||||||||||| ||||||||||||||||||||||||||||| |    
T  55065260 cagtgtttgatttgtaaaactgtttcaggtacaagacaaactggagggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacaca 55065359  T
Q  134 actttttgtctcacgtacaagttgt 158  Q
    |||||||||| ||||||||||||||    
T  55065360 actttttgtcccacgtacaagttgt 55065384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 3649810 - 3649671
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||||||||| |||||||||||||||||||||||||||  |||| |||||||| ||||||  ||||||||||||||| | ||||||||||||||    
T  3649810 aacaactccagttgtctagtgtttgatttgtaaaactgtttcagggacagaacaaactgaaggcaagggacaggacaaaaactaaaatttttgtccctca 3649711  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||||||||| || ||||||||||| ||||||||||||||    
T  3649710 ccaaaccacagcacaactttttgtcccacgtacaagttgt 3649671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 32181428 - 32181289
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| || ||||  ||||||||||||||| |||||||||||||||||||||||||    
T  32181428 agttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaactagatgcaagggacaggacaaaaactcatatttttgtccctcaccaaaccac 32181329  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |  | ||||||||||| |||||||||||||| | ||||||    
T  32181328 agtacaactttttgtcccacgtacaagttgtctaaaatac 32181289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 4325966 - 4325817
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| || |||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||  ||||||| ||||||| ||||||||||| |||    
T  4325966 aaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggagaaaaactcatatttttgtctctc 4325867  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || ||||| ||||| ||||||||||| |||||||||||||| | ||||||    
T  4325866 acaaaaccgcaacacaactttttgtcccacgtacaagttgtctaaaatac 4325817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 36743599 - 36743748
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| || |||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||  |||| |||||||| | |||||||||||||||    
T  36743599 aaacaactctagttgttcagtgtttgaattgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaattcatatttttgtccctc 36743698  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||| ||| || ||||||||||| |||||||||||||| | ||||||    
T  36743699 accaaactacagcacaactttttgtcccacgtacaagttgtctaaaatac 36743748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 55594059 - 55593911
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||| ||||||||||||||||||||||| |||| || |||||||||||||  ||||||||||||||| ||||||| ||||||||    
T  55594059 aacaactctagttgtccagtatttgatttgtaaaactgtttcaggtacatgataaactggaggcaagggacaggacaaaaactcatattttagtccctca 55593960  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || |||||||| || |||||||||||||| | ||||||    
T  55593959 ccaaaccacagcacaactttttatcccacgtacaagttgtctaaaatac 55593911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 39078835 - 39078696
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||  || ||||||||| |||| ||||||||||||||    
T  39078835 aacaactccagttgtccagtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagagataggacaaaacctgaaatttttgtccctca 39078736  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||||||||||| || ||||||||  |||||| ||||||    
T  39078735 ccaaaccacaacacaaatttttgtcctacgtacgagttgt 39078696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 49152021 - 49152151
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||| |||||||||| ||||||||||||||||||| |||| ||||||||||| ||||  |||| |||||||||| |||||||||||||||||||||||||    
T  49152021 agttatccagtgtttaatttgtaaaactgtttcaggtacaagacaaactggatgcaagggacacgacaaaaactcatatttttgtccctcaccaaaccac 49152120  T
Q  128 aacataactttttgtctcacgtacaagttgt 158  Q
    |||| |||||||| || ||||||||||||||    
T  49152121 aacacaactttttatcccacgtacaagttgt 49152151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 28115425 - 28115278
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||| ||||||||||||||||||||||||  | |||| ||||||||||||||||  ||||||| ||||| ||||||||||||||||||    
T  28115425 aacaactcaagttgtctagtgtttgatttgtaaaactgttttgg-tacaagacaaactggaggcaagggacaggagaaaaattgatatttttgtccctca 28115327  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| ||||||||||| ||| |||||||||| | ||||||    
T  28115326 ccaaaccacaacacaactttttgtcccacatacaagttgtctaaaatac 28115278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 34930078 - 34929950
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||  ||||||||||||||| |||||||||| |||||||||||||||     
T  34930078 ttgtccagtgtttgatttgtaaaactgtttcagatacagaataaactggaggcaagggacaggacaaaaactcatatttttgttcctcaccaaaccacag 34929979  T
Q  130 cataactttttgtctcacgtacaagttgt 158  Q
    || ||||||||| | ||  ||||||||||    
T  34929978 cacaactttttgccccatatacaagttgt 34929950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 6776752 - 6776613
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||||||||||||||||||||||| || || || || || ||||| |||||||||  ||||||||||||||| ||||||||||||||||    
T  6776752 aacaactctagttgtccagtgtttgatttgtaaaattgatttaggtatagcacaaattggaggcaagggacaggacaaaaactcatatttttgtccctca 6776653  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||||||||||| ||||||||||| |||||| |||||||    
T  6776652 ccaaaccacaacacaactttttgtcccacgtaaaagttgt 6776613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 29 - 140
Target Start/End: Original strand, 6973835 - 6973946
Alignment:
Q  29 gttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccaca 128  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||||||| ||| ||||||||||| ||||||||||    
T  6973835 gttgtccagtgtttgatttgtaaaactgtttcaggtactggacaaacgggaggcaattgacaggacaaaaactcataattttgtccctcgccaaaccaca 6973934  T
Q  129 acataacttttt 140  Q
    ||| ||||||||    
T  6973935 acacaacttttt 6973946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 27 - 158
Target Start/End: Complemental strand, 26083505 - 26083374
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||||  |||||||||||||||||| ||||||||  |||| |||||||||||||||  |||| |||||||||||| ||||||||||||||||||||||    
T  26083505 cagttgtttagtgtttgatttgtaaaattgtttcagggacagaacaaactggaggcaagggacatgacaaaaactgaaatttttgtccctcaccaaacca 26083406  T
Q  127 caacataactttttgtctcacgtacaagttgt 158  Q
    || |||||||||||||| ||| ||||||||||    
T  26083405 cagcataactttttgtcccacttacaagttgt 26083374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 54543163 - 54543016
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||| ||||||||||||||||||||| |||||  ||||||||||| |||||||||  ||||||||||||||| ||||||||||||||||    
T  54543163 aacaactctagttgttcagtgtttgatttgtaaaactatttcaagtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctca 54543064  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||| | || ||| ||||||| |||||||||||||| | ||||||    
T  54543063 ccaaaccatagcacaac-ttttgtcccacgtacaagttgtctaaaatac 54543016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 27 - 158
Target Start/End: Complemental strand, 29593061 - 29592930
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||  |||| |||||||||| |||||||||| | |||| ||||||    
T  29593061 cagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggatgcaagggacatgacaaaaactcatatttttgtacttcactaaacca 29592962  T
Q  127 caacataactttttgtctcacgtacaagttgt 158  Q
    || || ||||||||||| ||| || |||||||    
T  29592961 cagcacaactttttgtcccacataaaagttgt 29592930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 47361335 - 47361449
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||  |||| ||| |||| | |||||||||||||||||||||||||    
T  47361335 agttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaaccggaggcaagggacaagac-aaaattcatatttttgtccctcaccaaaccac 47361433  T
Q  128 aacataactttttgtc 143  Q
    |||| |||||||||||    
T  47361434 aacacaactttttgtc 47361449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 42870145 - 42870027
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||||| |||||||||||||||||||||||| | ||||||||||||||| |||||  ||||||||||||||| ||||||||||||||||    
T  42870145 aacaactctagttgtccggtgtttgatttgtaaaactgtttctggtacaggacaaactgggggcaagagacaggacaaaaactcatatttttgtccctca 42870046  T
Q  119 ccaaaccacaacataactt 137  Q
    |||||||||| || |||||    
T  42870045 ccaaaccacagcacaactt 42870027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 33 - 158
Target Start/End: Original strand, 25978538 - 25978662
Alignment:
Q  33 tccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacat 132  Q
    ||||||||||||||||||||||||||||||  ||| |||||| |||||||||   |||||||||||||||| |||||||||||||||||||||| | ||     
T  25978538 tccagtgtttgatttgtaaaactgtttcagg-acatgacaaattggaggcaatgaacaggacaaaaactgaaatttttgtccctcaccaaaccatatcac 25978636  T
Q  133 aactttttgtctcacgtacaagttgt 158  Q
    ||||||||||||||| ||||||||||    
T  25978637 aactttttgtctcacttacaagttgt 25978662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 22318303 - 22318435
Alignment:
Q  26 ccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacc 125  Q
    |||| |||| |||||||||||||||||||||||| ||  |||| |||||||| ||||||  ||||||||||||  ||| |||||||||||||||||||||    
T  22318303 ccagctgtctagtgtttgatttgtaaaactgttttagggacagaacaaactgaaggcaagagacaggacaaaatttgaaatttttgtccctcaccaaacc 22318402  T
Q  126 acaacataactttttgtctcacgtacaagttgt 158  Q
    |||||| |||||||||||| ||||| |||||||    
T  22318403 acaacacaactttttgtcttacgtagaagttgt 22318435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 50186702 - 50186554
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||| ||||||||||||||||||| ||||| || | ||||||||||| |||||||  ||| ||| ||||||| ||||||||||||||||    
T  50186702 aacaactctagttgttcagtgtttgatttgtaaaattgttttaggtgcaggacaaactagaggcaagggacgggataaaaactcatatttttgtccctca 50186603  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| |||||||| || ||| |||||||||| | ||||||    
T  50186602 ccaaaccacaacacaactttttatcccacatacaagttgtctaaaatac 50186554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 53200572 - 53200695
Alignment:
Q  36 agtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataac 135  Q
    ||||||||||||| |||||||||||||| |||||| |||||||||||||   ||| |||||||||||| |||||||||||||||||||||||| || |||    
T  53200572 agtgtttgatttgcaaaactgtttcagagacaggataaactggaggcaaggaacatgacaaaaactgaaatttttgtccctcaccaaaccacagcacaac 53200671  T
Q  136 -tttttgtctcacgtacaagttgt 158  Q
     |||||||| ||||||||||||||    
T  53200672 ttttttgtcccacgtacaagttgt 53200695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 19 - 153
Target Start/End: Complemental strand, 2787138 - 2787004
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||| |||||||||||||||||| |||||||| ||||| |||||||||| ||||  ||||||||||||||| |||||||||||| |||    
T  2787138 aacaactctagttgtctagtgtttgatttgtaaaattgtttcaggtacagtacaaactggatgcaagggacaggacaaaaactcatatttttgtccttca 2787039  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaa 153  Q
    | |||||||| || || |||||||| |||||||||    
T  2787038 ctaaaccacatcacaaatttttgtcccacgtacaa 2787004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 29616340 - 29616196
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttca-gatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    ||||| || |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||  ||||||||||||||| ||||||||||||||     
T  29616340 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccct- 29616242  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
         |||||| || ||||||||||| ||||||||| |||| | ||||||    
T  29616241 ----gaccacagcacaactttttgtcccacgtacaaattgtctaaaatac 29616196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 36 - 149
Target Start/End: Complemental strand, 42772945 - 42772832
Alignment:
Q  36 agtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataac 135  Q
    |||||||||||||||||| |||||||| |||| |||||||| |||||||  |||| |||||||||| |||||||||||| |||||||||||||||| |||    
T  42772945 agtgtttgatttgtaaaattgtttcaggtacatgacaaacttgaggcaagagacaagacaaaaactcatatttttgtccttcaccaaaccacaacacaac 42772846  T
Q  136 tttttgtctcacgt 149  Q
    |||||||| |||||    
T  42772845 tttttgtcccacgt 42772832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 9807321 - 9807182
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||| || ||||  ||||||||||||||| |  ||||||| |||||||||||||    
T  9807321 cagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactagatgcaatggacaggacaaaaactcaactttttgt-cctcaccaaacca 9807223  T
Q  127 caacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||  | |||||||||||  ||||||||||||| | ||||||    
T  9807222 cagtacaactttttgtcctacgtacaagttgtctaaaatac 9807182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 7554869 - 7555008
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||||| ||| |||||||||||||||||||||||||||||||  ||||  |||||||| | ||||  |||| || |||||||  ||||||||||| |||    
T  7554869 aacaatttcagctgtccagtgtttgatttgtaaaactgtttcatgtacaaaacaaactgaatgcaagagacatgataaaaactcgtatttttgtccttca 7554968  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    | |||||| |||| ||||||||||||||||||||||||||    
T  7554969 ctaaaccataacacaactttttgtctcacgtacaagttgt 7555008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 37695470 - 37695592
Alignment:
Q  36 agtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataac 135  Q
    ||||||| ||||| ||||||||||||| |||| || ||| |||||| ||  |||| ||||||||||||||||||||||||||| |||||||||||| |||    
T  37695470 agtgttttatttggaaaactgtttcaggtacatgataaattggaggtaagagacaagacaaaaactgatatttttgtccctcatcaaaccacaacacaac 37695569  T
Q  136 tttttgtctcacgtacaagttgt 158  Q
    |||||||| |||||||| |||||    
T  37695570 tttttgtcccacgtacaggttgt 37695592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 115
Target Start/End: Complemental strand, 14296730 - 14296645
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccc 115  Q
    |||||||||||||||||||||||| |||||||| || |||||||||| |||||||  ||||||||||||||| |||||||||||||    
T  14296730 ttgtccagtgtttgatttgtaaaattgtttcaggtataggacaaacttgaggcaagggacaggacaaaaactcatatttttgtccc 14296645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 115
Target Start/End: Complemental strand, 14314978 - 14314893
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccc 115  Q
    |||||||||||||||||||||||| |||||||| || |||||||||| |||||||  ||||||||||||||| |||||||||||||    
T  14314978 ttgtccagtgtttgatttgtaaaattgtttcaggtataggacaaacttgaggcaagggacaggacaaaaactcatatttttgtccc 14314893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 30942963 - 30942823
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggac-aaaaactgatatttttgtccctc 117  Q
    ||||| ||||||| | ||||||||||||| ||||||||||||||  |||| ||||| |||||||||  ||| |||| ||||||||| |||| |||| |||    
T  30942963 aacaactccagttattcagtgtttgatttataaaactgtttcagggacagaacaaattggaggcaagagacgggacaaaaaactgaaatttctgtctctc 30942864  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||||||||||||| ||| ||||| ||||| || |||||||    
T  30942863 accaaaccacaacacaacattttgcctcacatataagttgt 30942823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 43641205 - 43641125
Alignment:
Q  87 gacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  43641205 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 43641125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 38 - 156
Target Start/End: Complemental strand, 9948084 - 9947966
Alignment:
Q  38 tgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactt 137  Q
    |||||||||||||||||||||| ||  ||| |||||||| |||||||  |||| |||||||||| | ||| || |||||||| ||||||||  | |||||    
T  9948084 tgtttgatttgtaaaactgtttaaggaacatgacaaacttgaggcaagagacatgacaaaaactaaaattcttatccctcactaaaccacattacaactt 9947985  T
Q  138 tttgtctcacgtacaagtt 156  Q
    |||||||||||||||||||    
T  9947984 tttgtctcacgtacaagtt 9947966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 56487212 - 56487288
Alignment:
Q  37 gtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtc 113  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||  ||||||||||||| | |||||||||||    
T  56487212 gtgtttgatttgtaaaactgtttcagatataggacaaacttgaggcaagggacaggacaaaaatttatatttttgtc 56487288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 23328024 - 23327944
Alignment:
Q  88 acaggacaaaaactgatatttttgtccctcaccaaaccacaacataac-tttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||||||| |||||||||||||||| |||||||||||| ||| |||||||| |||||||||||||| | ||||||    
T  23328024 acaggacaaaaactcatatttttgtccctcagcaaaccacaacacaacttttttgtcccacgtacaagttgtctaaaatac 23327944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 37932020 - 37931948
Alignment:
Q  93 acaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaat 165  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||  || |||||||||||| ||||    
T  37932020 acaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcctacatacaagttgtttaaaat 37931948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 158
Target Start/End: Original strand, 44355785 - 44355906
Alignment:
Q  37 gtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataa-c 135  Q
    |||||||||||||||| |||||| ||  | ||||||||||||||| ||  || |||||||||| ||| ||||||||||||||  ||||||||||| ||      
T  44355785 gtgtttgatttgtaaa-ctgttttagggataggacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 44355883  T
Q  136 tttttgtctcacgtacaagttgt 158  Q
    ||||||||| |||||||||||||    
T  44355884 tttttgtcttacgtacaagttgt 44355906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 38 - 167
Target Start/End: Complemental strand, 21098689 - 21098560
Alignment:
Q  38 tgtttgatttgtaaaactgtttcag--atacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataac 135  Q
    ||||| |||||||||||||||||||  ||| ||||| ||||| |||| |  || |||||||||| ||| ||| ||||| ||||| |||||||||||||||    
T  21098689 tgtttaatttgtaaaactgtttcagggatataggactaactgcaggcta--gaaaggacaaaaattgaaattcttgtctctcactaaaccacaacataac 21098592  T
Q  136 tttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||| |||||| || |||| | ||||||    
T  21098591 tttttgtcgcacgtaaaatttgtctaaaatac 21098560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 43739567 - 43739496
Alignment:
Q  87 gacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||| ||| ||||||| ||| ||||||||||    
T  43739567 gacatgacaaaaactgaaattattgtccctcaccaaaccacaacacaacattttgtcccacatacaagttgt 43739496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 7001976 - 7001903
Alignment:
Q  69 gacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgt 142  Q
    |||||||| |||||||  ||||| ||||||||  | ||||||||||||||||||||||||||| ||||||||||    
T  7001976 gacaaactcgaggcaagagacagaacaaaaacaaaaatttttgtccctcaccaaaccacaacacaactttttgt 7001903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 70 - 150
Target Start/End: Complemental strand, 52673934 - 52673854
Alignment:
Q  70 acaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgta 150  Q
    ||||||||||| |||  |||| ||||||||| || ||||||||||||||| ||||| ||||| || |||||||||||||||    
T  52673934 acaaactggagtcaagggacatgacaaaaacagaaatttttgtccctcactaaacctcaacacaattttttgtctcacgta 52673854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 37931849 - 37931801
Alignment:
Q  250 ttatgtcttgtactgttatcttcagtacttacagttttgcaaaccaaac 298  Q
    ||||||||||||||||||| | |||||||||| ||||||||||||||||    
T  37931849 ttatgtcttgtactgttatgtccagtacttactgttttgcaaaccaaac 37931801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 108 - 167
Target Start/End: Complemental strand, 38520584 - 38520525
Alignment:
Q  108 tttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||||||||||| ||||| |||||||| |||| ||||||||| | ||||||    
T  38520584 tttgtccctcaccaaaccacagcataattttttgtcccacgcacaagttgtataaaatac 38520525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 167
Target Start/End: Original strand, 45577619 - 45577752
Alignment:
Q  38 tgtttgatttgtaaaa-ctgtttcagatacaggacaaactggaggcaaatgacaggacaaaaac---tgatatttttgtccctcaccaaaccacaacata 133  Q
    |||||||||||||||| |||||| |   ||| ||||||||||||||||  |||| ||||||||    ||| ||| |||| |||| | ||||||||||| |    
T  45577619 tgtttgatttgtaaaagctgttttatggacatgacaaactggaggcaagagacatgacaaaaaaaaatgaaattcttgttcctcgctaaaccacaacaca 45577718  T
Q  134 actttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| ||||| |||||||| | ||||||    
T  45577719 actttttgtcccacgtgcaagttgtctaaaatac 45577752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 51518528 - 51518481
Alignment:
Q  38 tgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaa 85  Q
    ||||||||||||||||||||||| |||||||||||| ||||| |||||    
T  51518528 tgtttgatttgtaaaactgtttctgatacaggacaagctggaagcaaa 51518481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 2786889 - 2786839
Alignment:
Q  254 gtcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    ||||||||||||||| | |||||||||| |||||||||||||||| |||||    
T  2786889 gtcttgtactgttatgtccagtacttactgttttgcaaaccaaacacaccc 2786839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 43189675 - 43189799
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||||||  |||||| ||||||||||||||||||| |||||  || | | ||||||||| ||||||  |||| |||||||||  |  |||||||  ||||    
T  43189675 aacaattttagttgtacagtgtttgatttgtaaaattgtttttgaaatatgacaaactgaaggcaagggacaagacaaaaacataattttttgtgtctca 43189774  T
Q  119 ccaaaccacaacataactttttgtc 143  Q
    | ||||||| ||| || ||||||||    
T  43189775 ctaaaccacgacacaagtttttgtc 43189799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 23328070 - 23328015
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaa 74  Q
    ||||| || |||||||  |||||||| ||||||||||||||||| |||||||||||    
T  23328070 aacaactctagttgtcatgtgtttgacttgtaaaactgtttcaggtacaggacaaa 23328015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 146
Target Start/End: Complemental strand, 32858408 - 32858369
Alignment:
Q  107 ttttgtccctcaccaaaccacaacataactttttgtctca 146  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  32858408 ttttgtccctcactaaaccataacataactttttgtctca 32858369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 304
Target Start/End: Complemental strand, 36497153 - 36497106
Alignment:
Q  257 ttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    |||||||||||| | |||||||| | ||||||||||||||||||||||    
T  36497153 ttgtactgttatgtccagtacttgctgttttgcaaaccaaacgcaccc 36497106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 13110477 - 13110443
Alignment:
Q  22 aattccagttgtccagtgtttgatttgtaaaactg 56  Q
    |||| ||||||||||||||||||||||||||||||    
T  13110477 aatttcagttgtccagtgtttgatttgtaaaactg 13110443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 21202670 - 21202612
Alignment:
Q  248 tgttatgtcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcacccgt 306  Q
    |||| |||||||||||||| | | ||||||||||  ||||||||||||||| |||||||    
T  21202670 tgttctgtcttgtactgttttgtccagtacttactattttgcaaaccaaacacacccgt 21202612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 305
Target Start/End: Complemental strand, 52319249 - 52319199
Alignment:
Q  255 tcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcacccg 305  Q
    |||||||||||||| | |||||||| | |||||||||||||||| ||||||    
T  52319249 tcttgtactgttatgtccagtacttgctgttttgcaaaccaaacacacccg 52319199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 20802694 - 20802743
Alignment:
Q  255 tcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    |||||||||||| | |||||||||| | |||||||||||||||| |||||    
T  20802694 tcttgtactgttctgttcagtacttgctgttttgcaaaccaaacacaccc 20802743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 37865676 - 37865627
Alignment:
Q  255 tcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    |||||||||||||| | | |||||||| |||||||||||||||| |||||    
T  37865676 tcttgtactgttatgtcccgtacttactgttttgcaaaccaaacacaccc 37865627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 304
Target Start/End: Complemental strand, 29592831 - 29592775
Alignment:
Q  248 tgttatgtcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    |||| |||||||||||| ||| | ||||| |||| |||||||||||||||| |||||    
T  29592831 tgttctgtcttgtactgatatgtccagtatttactgttttgcaaaccaaacacaccc 29592775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 44640489 - 44640457
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgttt 59  Q
    ||||||| |||||||||||||||||||||||||    
T  44640489 cagttgtacagtgtttgatttgtaaaactgttt 44640457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 55065495 - 55065543
Alignment:
Q  255 tcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcacc 303  Q
    |||| ||||||||| | |||||||| | |||||||||||||||||||||    
T  55065495 tcttatactgttatgtccagtacttgctgttttgcaaaccaaacgcacc 55065543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 1e-54; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 11279299 - 11279151
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||   ||||||||||||||| ||||||||||||||||    
T  11279299 aacaactccagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaactggaggcatgggacaggacaaaaactcatatttttgtccctca 11279200  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  11279199 ccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatac 11279151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 3259855 - 3259706
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  3259855 aaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctc 3259756  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||||||| |||||||| || |||||||||||||| | ||||||    
T  3259755 accaaaccacaacacaactttttatcccacgtacaagttgtctaaaatac 3259706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 10960171 - 10960023
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||    
T  10960171 aacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgaaggcaagggacaggacaaaaactcatatttttgtccctca 10960072  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
     |||||||||||| ||||||||||| |||||||||||||| | ||||||    
T  10960071 acaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 10960023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 11675331 - 11675467
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  11675331 aaacaattccagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacaggacaaaaactgatatttttgtctctc 11675430  T
Q  118 accaaaccacaacataactttttgtctcacgtacaag 154  Q
    ||||||||| |||| |||||||| || ||||||||||    
T  11675431 accaaaccataacacaactttttatcccacgtacaag 11675467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 10324069 - 10324217
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||| |||||||| ||||||||||||||||||| ||||||||||||| |||||||  ||||||||||||||| ||||||||||||||||    
T  10324069 aacaactctagttgttcagtgtttaatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctca 10324168  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  10324169 ccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatac 10324217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 10485329 - 10485189
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| ||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  10485329 aaacaactccagttgtccagtgtttgatttgtaaaattatttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctc 10485230  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    | ||||||||| || ||||||||||| ||||||||||||||    
T  10485229 agcaaaccacagcacaactttttgtcccacgtacaagttgt 10485189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 3379872 - 3379733
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||| ||||||||||||     
T  3379872 agttgtccagtgtttgatttataaaactgtttcagatacaggacaaactggaggcaagagacaagacaaaaactgatatttttgtcgctcaccaaaccat 3379773  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | || ||||||||||||||| |||||||||| ||||||||    
T  3379772 agcacaactttttgtctcacatacaagttgtcttaaatac 3379733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 24203524 - 24203385
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  24203524 agttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccac 24203425  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | || ||||||||||| |||||||||||||| | ||||||    
T  24203424 agcacaactttttgtcccacgtacaagttgtctaaaatac 24203385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 32132347 - 32132477
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||| ||||    
T  32132347 agttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaatccac 32132446  T
Q  128 aacataactttttgtctcacgtacaagttgt 158  Q
    |||| ||||||||||| ||||||||||||||    
T  32132447 aacacaactttttgtcccacgtacaagttgt 32132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 11382233 - 11382087
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||  ||||    
T  11382233 aacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgt--ctca 11382136  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  11382135 ccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatac 11382087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 3932765 - 3932913
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||  | ||||||||||||| ||||||||||| ||||    
T  3932765 aacaattctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaggggcaggacaaaaactcatatttttgtctctca 3932864  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  3932865 ccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatac 3932913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 24242835 - 24242687
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||  ||||||||| ||||||||||||||||    
T  24242835 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacacaacaaaaactcatatttttgtccctca 24242736  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  24242735 ccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatac 24242687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 166892 - 167029
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||  ||||  ||||||||| |||||||||||||||||||||||||||    
T  166892 ttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacataacaaaaactcatatttttgtccctcaccaaaccacaa 166991  T
Q  130 cataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || ||||||||||| |||||||||||||| | ||||||    
T  166992 cacaactttttgtcccacgtacaagttgtctaaaatac 167029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 2615067 - 2614919
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||| |||||||||||||||| |||||||| ||||||||||| |||||||||  ||||||||||||||| ||||||||||||||||    
T  2615067 aacaactctagttgtccactgtttgatttgtaaaattgtttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctca 2614968  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  2614967 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 2614919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 11212428 - 11212280
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||  |||| |||||||||| ||| ||||||||||||    
T  11212428 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagataagggacatgacaaaaactcatacttttgtccctca 11212329  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||||||| ||||||||||||| |||||||| | ||||||    
T  11212328 ccaaaccacaacataaccttttgtctcacgtgcaagttgtctaaaatac 11212280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 11613758 - 11613897
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||   |||||||||||||| |||||||||||||||||||||||||    
T  11613758 agttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaaatggagacaaggaacaggacaaaaactcatatttttgtccctcaccaaaccac 11613857  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | || ||||||||||| |||||||||||||| | ||||||    
T  11613858 agcacaactttttgtcccacgtacaagttgtataaaatac 11613897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 15276895 - 15277034
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  15276895 aacaactctagttgtctaatgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 15276994  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||||||||| || |||||||| || ||||||||||||||    
T  15276995 ccaaaccacatcacaactttttttcccacgtacaagttgt 15277034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 15277249 - 15277386
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    |||||||||||||||||||||||| ||||| || |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||     
T  15277249 ttgtccagtgtttgatttgtaaaattgtttaaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacat 15277348  T
Q  130 cataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || |||||||| || |||||||||||||| | ||||||    
T  15277349 cacaactttttatcccacgtacaagttgtctaaaatac 15277386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 4494081 - 4494221
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggac-aaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  4494081 agttgtccagtgtttgatttgtaagactctttcaggtacaggacaaactggaggcaagtgacaggacaaaaaactcatatttttgtccctcaccaaacca 4494180  T
Q  127 caacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||  | ||||||||||| |||||||||||||| | ||||||    
T  4494181 cagtacaactttttgtcccacgtacaagttgtctaaaatac 4494221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 32409819 - 32409958
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||  ||||||||||||||| |||||||||||||||||||||||||    
T  32409819 agttatccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagggacaggacaaaaactcatatttttgtccctcaccaaaccac 32409918  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | || ||||||||||| |||  ||||||||| | ||||||    
T  32409919 atcacaactttttgtcccactcacaagttgtctaaaatac 32409958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 27 - 167
Target Start/End: Original strand, 14925422 - 14925562
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| || | ||  ||||||||||||||| ||||||||||||||||||||||||    
T  14925422 cagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagatgtaagggacaggacaaaaactcatatttttgtccctcaccaaacca 14925521  T
Q  127 caacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||  | ||||||||||| ||| |||||||||| | ||||||    
T  14925522 cagtacaactttttgtcccacttacaagttgtctaaaatac 14925562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 31 - 167
Target Start/End: Complemental strand, 17867994 - 17867858
Alignment:
Q  31 tgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaac 130  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||| || ||||||| |||||||||||||||| ||||||||| |    
T  17867994 tgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagataaaaactcatatttttgtccctcatcaaaccacagc 17867895  T
Q  131 ataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | ||||||||||| ||||||||| |||| | ||||||    
T  17867894 acaactttttgtcccacgtacaaattgtctaaaatac 17867858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 31 - 167
Target Start/End: Complemental strand, 17877777 - 17877641
Alignment:
Q  31 tgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaac 130  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||| || ||||||| |||||||||||||||| ||||||||| |    
T  17877777 tgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagataaaaactcatatttttgtccctcatcaaaccacagc 17877678  T
Q  131 ataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | ||||||||||| ||||||||| |||| | ||||||    
T  17877677 acaactttttgtcccacgtacaaattgtctaaaatac 17877641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 17443424 - 17443285
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||||| || ||||  ||||||||||||||| |||||||| ||||||||||||||||    
T  17443424 agttgtccagtgtttgatttgtaaaaccatttcaggtacaggacaaactagatgcaagggacaggacaaaaactcatatttttatccctcaccaaaccac 17443325  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |  | ||||||||||| |||||||||||||| | ||||||    
T  17443324 agtacaactttttgtcccacgtacaagttgtctaaaatac 17443285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 18597116 - 18597255
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||  | | ||||||| ||||||||  |||| ||||||| |||| ||||||||||||||    
T  18597116 aacaatttcagttgttcagtgtttgatttgtaaaactgtttcagggatatgacaaaccggaggcaagggacatgacaaaatctgaaatttttgtccctca 18597215  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||||||||||| ||||||||||| |||||| |||||||    
T  18597216 ccaaaccacaacacaactttttgtcccacgtataagttgt 18597255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 34176982 - 34176865
Alignment:
Q  38 tgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactt 137  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||| ||||| |||||||||| ||||||||||| ||||||||| |||| || |||||    
T  34176982 tgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagtgacatgacaaaaactcatatttttgtctctcaccaaatcacagcacaactt 34176883  T
Q  138 tttgtctcacgtacaagt 155  Q
    |||||| |||||||||||    
T  34176882 tttgtcccacgtacaagt 34176865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 18057679 - 18057542
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||||| || | ||  |||| |||||||||| ||||||||||||||||||||||||||     
T  18057679 ttgtccaatgtttgatttgtaaaactgtttgagatacatgacaaactagatgtaagggacatgacaaaaactcatatttttgtccctcaccaaaccacag 18057580  T
Q  130 cataactttttgtctcacgtacaagttgttttaaatac 167  Q
     | ||||||||||| |||||||||||||| | ||||||    
T  18057579 tacaactttttgtcccacgtacaagttgtctaaaatac 18057542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 31870055 - 31870206
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagataca---ggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccc 115  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||  |||   | ||||||| |||||||  ||||  |||||||||||||||||||||||    
T  31870055 aacaactccagttgtccagtgtttgatttgtaaaactgtctcaggaacaacagaacaaactagaggcaagggacaaaacaaaaactgatatttttgtccc 31870154  T
Q  116 tcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||||||||| ||||||||||| |||||| | ||||| | ||||||    
T  31870155 tcaccaaaccacaacacaactttttgtcccacgtataggttgtctaaaatac 31870206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 27 - 167
Target Start/End: Original strand, 9902624 - 9902764
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    ||||||| |||||||| ||||||  ||||||||||| || |||||||||| |||| ||  ||||||||||||||||||||||||||||||||  ||||||    
T  9902624 cagttgttcagtgtttaatttgttgaactgtttcaggtataggacaaactagaggtaagggacaggacaaaaactgatatttttgtccctcattaaacca 9902723  T
Q  127 caacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || || ||||||||||| |||||||||||||| | ||||||    
T  9902724 cagcacaactttttgtcccacgtacaagttgtctaaaatac 9902764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 8177858 - 8177987
Alignment:
Q  37 gtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataact 136  Q
    ||||||||||| |||||||||||||| ||||  |||||||||||||||  ||||||| ||||| |||||||||||||||| |||||||||||||| ||||    
T  8177858 gtgtttgatttataaaactgtttcaggtacaaaacaaactggaggcaagggacaggataaaaa-tgatatttttgtcccttaccaaaccacaacacaact 8177956  T
Q  137 ttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||| ||||| |||||||| | ||||||    
T  8177957 ttttgtcccacgttcaagttgtctaaaatac 8177987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 32860223 - 32860085
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| |||| ||||||||||||||||||||||||| |||||||  ||| ||||||||||||||||  |||| ||||||| |||  |||||||||| ||    
T  32860223 aaacaactccaattgtccagtgtttgatttgtaaaacagtttcagggacatgacaaactggaggcaagggacatgacaaaagctgcaatttttgtccatc 32860124  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagtt 156  Q
     |||||||||| || ||| ||||||||||||||||||||    
T  32860123 gccaaaccacagcacaaccttttgtctcacgtacaagtt 32860085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 31 - 167
Target Start/End: Complemental strand, 29054515 - 29054379
Alignment:
Q  31 tgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaac 130  Q
    |||||| ||||||||||||||||| |||||||  |||||||||| |||| ||||  |||| ||||||||||   ||||||||||||| |||||||||| |    
T  29054515 tgtccaatgtttgatttgtaaaacagtttcaggaacaggacaaattggaagcaagggacatgacaaaaactacaatttttgtccctcgccaaaccacagc 29054416  T
Q  131 ataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | |||||||||||||||||||||||||| | ||||||    
T  29054415 acaactttttgtctcacgtacaagttgtctaaaatac 29054379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 7396083 - 7396220
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||||| |||||||   |||||||||||||||| ||||||| |  ||| ||||| ||||| ||||  |||||||||||||| || || || |||||||    
T  7396083 aaacaatttcagttgtatggtgtttgatttgtaaagctgtttctgggacatgacaagctggaagcaatggacaggacaaaaacagaaatctt-gtccctc 7396181  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagtt 156  Q
    || ||||||| ||| ||||||||||||||||||||||||    
T  7396182 actaaaccactacacaactttttgtctcacgtacaagtt 7396220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 64 - 158
Target Start/End: Original strand, 34683988 - 34684080
Alignment:
Q  64 tacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||| ||||||||||||||||  |||| |||||||||| ||  ||||||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  34683988 tacatgacaaactggaggcaagggacacgacaaaaactcat--ttttgtccctcaccaaaccacaacacaactttttgttccacgtacaagttgt 34684080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 3290789 - 3290720
Alignment:
Q  71 caaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataacttttt 140  Q
    ||||||||||||||  ||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  3290789 caaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaacttttt 3290720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 23636386 - 23636257
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    ||||||| ||||||||||||||||||| ||||| || |||| || |||||||| ||||   | |||| ||||||| ||||||||||   |||  ||||||    
T  23636386 cagttgttcagtgtttgatttgtaaaattgttttaggtacatgataaactggatgcaaggaataggataaaaactcatatttttgttattcattaaacca 23636287  T
Q  127 caacataactttttgtctcacgtacaagtt 156  Q
    ||||| || |||||||||||||||||||||    
T  23636286 caacacaaatttttgtctcacgtacaagtt 23636257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 150
Target Start/End: Original strand, 14808012 - 14808090
Alignment:
Q  72 aaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgta 150  Q
    ||||| |||||||  || |||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  14808012 aaactagaggcaagggataggataaaaattgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgta 14808090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 9614137 - 9613997
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    ||||||| || ||||||||||||||||||||||||   |||||| |||||||||||||  |||| |||||||  |||  |||||||  ||||| |||||     
T  9614137 cagttgtacaatgtttgatttgtaaaactgtttcaaggacaggataaactggaggcaagggacatgacaaaatttgaagtttttgttactcactaaaccg 9614038  T
Q  127 caacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||| || |||||||  |||||| ||||||| | ||||||    
T  9614037 caacacaattttttgttccacgtataagttgtctaaaatac 9613997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 160
Target Start/End: Original strand, 9200354 - 9200487
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggc-aaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||| || |||||||||||||||||||||| | | ||| |||||||| ||||| ||  |||| |||||||||  | ||| || |||||||||||||||    
T  9200354 agttgtacaatgtttgatttgtaaaactgttttaaagacatgacaaactagaggctaagagacaagacaaaaacaaaaattcttctccctcaccaaacca 9200453  T
Q  127 caacataactttttgtctcacgtacaagttgttt 160  Q
     |  | ||||||||||| ||| ||||| ||||||    
T  9200454 tataacaactttttgtcccacatacaaattgttt 9200487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 27824611 - 27824676
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaa 84  Q
    ||||||| ||||||| |||||||||||||||||||||||||  |  | |||||||||| |||||||    
T  27824611 aacaatttcagttgtacagtgtttgatttgtaaaactgtttttgggaaaggacaaactagaggcaa 27824676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 304
Target Start/End: Complemental strand, 10959928 - 10959872
Alignment:
Q  248 tgttatgtcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    |||| |||||||||||||| | | |||||||||| |||||||||||||||| |||||    
T  10959928 tgttctgtcttgtactgttctatccagtacttactgttttgcaaaccaaacacaccc 10959872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 14807976 - 14808010
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaa 53  Q
    ||||| |||||||||||||||||||||||||||||    
T  14807976 aacaactccagttgtccagtgtttgatttgtaaaa 14808010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 23636151 - 23636101
Alignment:
Q  248 tgttatgtcttgtactgttatcttcagtacttacagttttgcaaaccaaac 298  Q
    |||| |||||||||||||||| | ||||| |||| ||||||||||||||||    
T  23636151 tgttctgtcttgtactgttatatccagtatttactgttttgcaaaccaaac 23636101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 33041437 - 33041403
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaa 53  Q
    ||||| |||||||||||||||||||||||||||||    
T  33041437 aacaactccagttgtccagtgtttgatttgtaaaa 33041403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 11382013 - 11381964
Alignment:
Q  255 tcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    |||||||||||| | ||||||||||||  ||||||||||||||| |||||    
T  11382013 tcttgtactgttctgttcagtacttactattttgcaaaccaaacacaccc 11381964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 28502379 - 28502330
Alignment:
Q  255 tcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    |||||||||||| | | |||||||||| |||||||||||||||| |||||    
T  28502379 tcttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccc 28502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 29814785 - 29814736
Alignment:
Q  255 tcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    |||||||||||| | | |||||||||| |||||||||||||||| |||||    
T  29814785 tcttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccc 29814736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 32805398 - 32805349
Alignment:
Q  255 tcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    |||||||||||||| | |||||||| | |||||||||||||||| |||||    
T  32805398 tcttgtactgttatgtccagtacttgctgttttgcaaaccaaacacaccc 32805349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 14925183 - 14925215
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgttt 59  Q
    ||||||||||||||||||||||||||| |||||    
T  14925183 cagttgtccagtgtttgatttgtaaaattgttt 14925215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 1e-54; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 7523343 - 7523195
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  7523343 aacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 7523244  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  7523243 ccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatac 7523195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 39918669 - 39918530
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  39918669 agttgtccagtgtttgatttgtaaaactgtttcagatacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccac 39918570  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | || |||||||||||||||||||||||||| | ||||||    
T  39918569 agcacaactttttgtctcacgtacaagttgtctaaaatac 39918530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 8137008 - 8136860
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  8137008 aacaactctagttgtccagtgtttgttttgtaaaactgtttcagatacaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctca 8136909  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| |||||||||||  ||||||||||||| | ||||||    
T  8136908 ccaaaccacaacacaactttttgtcctacgtacaagttgtctaaaatac 8136860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 35701448 - 35701300
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  35701448 aacaactctagttgtccagtgtttgatttgtaaaactgtttctggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 35701349  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||||||||||||||  |||||||||||||| | ||||||    
T  35701348 ccaaaccacaacataactttttgttccacgtacaagttgtctaaaatac 35701300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 39788364 - 39788216
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||    
T  39788364 aacaattctagttgtccagtatttgatttgtaaaactgtttcaggtacaggacaaactgtaggcaaaggacaggacaaaaactcatatttttgtccctca 39788265  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  39788264 ccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatac 39788216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 21739095 - 21739234
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  21739095 agttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccac 21739194  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | || ||||||||||| |||||||||||||| | ||||||    
T  21739195 agcacaactttttgtcccacgtacaagttgtctaaaatac 21739234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 24181548 - 24181697
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||  ||||||||||||||| |||||||||||||||    
T  24181548 aaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagccaagggacaggacaaaaactcatatttttgtccctc 24181647  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||| |||||||||||||| |||||| ||||||| | ||||||    
T  24181648 accaaaccacagcataactttttgtcccacgtataagttgtctaaaatac 24181697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 41790388 - 41790535
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   |||||||||||||| ||||||||||||||||    
T  41790388 aacaattttagttgtccagtgtttgatttgtaaaactgtttcag-tacaggacaaactggaggcaataaacaggacaaaaactcatatttttgtccctca 41790486  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| ||||||||||||||||||||| |||| | ||||||    
T  41790487 ccaaaccacaacacaactttttgtctcacgtacaaattgtctaaaatac 41790535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 32528877 - 32528738
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||  ||||||||||||||| |||||||||||||||||||||||||    
T  32528877 agttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagggacaggacaaaaactcatatttttgtccctcaccaaaccac 32528778  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||| ||||||||||| |||||||||||||| | ||||||    
T  32528777 aacacaactttttgtcccacgtacaagttgtctaaaatac 32528738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 4689631 - 4689761
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||||    
T  4689631 cagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaacacatatttttgtccctcaccaaacca 4689730  T
Q  127 caacataactttttgtctcacgtacaagttg 157  Q
    ||||| ||||||||||| |||||||||||||    
T  4689731 caacacaactttttgtcccacgtacaagttg 4689761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 3735528 - 3735380
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||||||||||||||||||||||||||||| ||||||| |||| |||||| |||||||||  |||||||||||||||||||||||||||| |||    
T  3735528 aacaactccagttgtccagtgtttgatttgtaaaaccgtttcaggtacatgacaaaatggaggcaatggacaggacaaaaactgatatttttgtccatca 3735429  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  3735428 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 3735380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 11963512 - 11963364
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||| |||||||||| ||||||||||||||||    
T  11963512 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctca 11963413  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| ||||| |||||||| | ||||||    
T  11963412 ccaaaccacagcacaactttttgtcccacgtgcaagttgtctaaaatac 11963364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 2351842 - 2351703
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||| ||||||||||||||||||||||||| || || |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  2351842 agttgttcagtgtttgatttgtaaaactgtttaaggtataggacaaactggaggcaagtgacaggacaaaaactcatatttttgtccctcaccaaaccac 2351743  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | || ||||||||||| |||||||||||||| | ||||||    
T  2351742 agcacaactttttgtcccacgtacaagttgtctaaaatac 2351703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 6284232 - 6284362
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||   ||||||||||||||| || ||||||||||||||||||||||    
T  6284232 agttgtccagtgtttgatttgtaaaactgcttcaggtacaggacaaactggaggcatgggacaggacaaaaacttatttttttgtccctcaccaaaccac 6284331  T
Q  128 aacataactttttgtctcacgtacaagttgt 158  Q
    |||| ||||||||||| ||||||||||||||    
T  6284332 aacacaactttttgtcccacgtacaagttgt 6284362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 31770516 - 31770664
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||| |||||||||||||||||||||||||||  |||| ||||||||||||||||  ||||||||||||||| |||||||| |||||||    
T  31770516 aacaactctagttgttcagtgtttgatttgtaaaactgtttcatgtacaagacaaactggaggcaagggacaggacaaaaactcatatttttatccctca 31770615  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| ||||||||||| |||||||||||||| | ||||||    
T  31770616 ccaaaccacaacacaactttttgtcccacgtacaagttgtctgaaatac 31770664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 31880001 - 31880149
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  31880001 aacaactctagttgttcagtgtttgattagtaaaactgtttcaggtacaggacaaactggaggcaagtgacaggacaaaaactcatatttttgtccctca 31880100  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || |||| ||||||  ||||||||||||| | ||||||    
T  31880101 ccaaaccacatcacaactatttgtcctacgtacaagttgtctaaaatac 31880149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 7208164 - 7208303
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||  ||||| || |||||| |||||||||||||||||||||||||    
T  7208164 agttgtccagtgtttgatttgtaaaactgtttcaggtacgggacaaactggatgcaagagacagaaccaaaactcatatttttgtccctcaccaaaccac 7208263  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | || |||||||||||||||||||||||||| | ||||||    
T  7208264 agcacaactttttgtctcacgtacaagttgtctaaaatac 7208303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 22493344 - 22493483
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| |||| |||| |||||||||| ||||||||||||||||    
T  22493344 aacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggataaactggagccaaaggacaagacaaaaactcatatttttgtccctca 22493443  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||||||||| || ||||||||||| ||||||||||||||    
T  22493444 ccaaaccacagcacaactttttgtcacacgtacaagttgt 22493483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 7770204 - 7770342
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||  |||||||||||| |||    
T  7770204 aacaactctagttgtccagtgtttgatttgtaaaattgtttcaggtacaggacaaactggaggcaagggacaggacaaaaacacatatttttgtccttca 7770303  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttg 157  Q
    |||||||||| || ||||||||||| |||||||||||||    
T  7770304 ccaaaccacagcacaactttttgtcccacgtacaagttg 7770342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 24036402 - 24036253
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| ||||| ||||| |||||||||  |||||||||||| || |||||||||||||||    
T  24036402 aaacaattcaagttgtccagtgtttgatttggaaaactgtttcaggtacagcacaaattggaggcaagggacaggacaaaatctcatatttttgtccctc 24036303  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||| || |||||||| || |||||||||||||| | ||||||    
T  24036302 accaaaccacatcacaactttttatcccacgtacaagttgtctaaaatac 24036253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 31644616 - 31644469
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  | || |||||| ||| ||||||||||||||||    
T  31644616 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagag-caagacaaatactcatatttttgtccctca 31644518  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  31644517 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 31644469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 34795058 - 34794910
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||| | ||||||||||||||||||||||| ||||||||||||| |||||||  ||||||||||||||| ||||||||||||||||    
T  34795058 aacaactctagttgtccaatatttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctca 34794959  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||| ||||||| | ||||||    
T  34794958 ccaaaccacatcacaactttttgtcccacgtataagttgtctaaaatac 34794910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 22432243 - 22432382
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||  ||||||||||||||||||||||||| | ||||| |||||||||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  22432243 agttgtcctatgtttgatttgtaaaactgtttcaggttcaggataaactggaggcaagagacaggacaaaaactgatatttttgtccctcatcaaaccac 22432342  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||| || ||||||||||| ||||||||||| | ||||||    
T  22432343 aacacaattttttgtctcaagtacaagttgtctaaaatac 22432382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 23091238 - 23091360
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||  |||| |||||||||| |||||||||||| ||| ||||||||    
T  23091238 agttgtccagtgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaagggacaagacaaaaactcatatttttgtccgtcatcaaaccac 23091337  T
Q  128 aacataactttttgtctcacgta 150  Q
    |||| ||||||||||||||||||    
T  23091338 aacacaactttttgtctcacgta 23091360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 553557 - 553420
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    ||||| |||||||||||| |||||||||||||  |||||||||||||||||||||  |||| |||||||||| ||||||||||| |||||||||||||||    
T  553557 ttgtctagtgtttgatttataaaactgtttcaagtacaggacaaactggaggcaagagacaagacaaaaactcatatttttgtctctcaccaaaccacaa 553458  T
Q  130 cataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || ||||||||||| |||||||||||||| | ||||||    
T  553457 cacaactttttgtcccacgtacaagttgtctaaaatac 553420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 35 - 167
Target Start/End: Original strand, 8560923 - 8561055
Alignment:
Q  35 cagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataa 134  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||||| ||||||||||||||| || ||    
T  8560923 cagtgtttgatttgtaaaactgtttcagatacaggacaaactgaaagcaaaggacaagacaaaaactgatatttttgttcctcaccaaaccacatcacaa 8561022  T
Q  135 ctttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||  || ||||||||||| | ||||||    
T  8561023 ctttttgttccaggtacaagttgtctaaaatac 8561055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 35 - 167
Target Start/End: Original strand, 28090461 - 28090593
Alignment:
Q  35 cagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataa 134  Q
    |||||||||||||||||||||||||||| |||| | ||||||||||||||  |||| |||||||||| |||||||||||||||||||||| |||||| ||    
T  28090461 cagtgtttgatttgtaaaactgtttcaggtacaaggcaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaactacaacacaa 28090560  T
Q  135 ctttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||| |||||||||||||| | ||||||    
T  28090561 ctttttgtcccacgtacaagttgtctaaaatac 28090593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 29241549 - 29241411
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||  |||||| ||||| || |||||||||||||||     
T  29241549 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaattggaggcaagggacaggccaaaagctcatatttttgtccctcg 29241450  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttg 157  Q
    |||||||||| || ||||||||||| |||||||||||||    
T  29241449 ccaaaccacagcacaactttttgtcccacgtacaagttg 29241411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 39 - 167
Target Start/End: Original strand, 4818085 - 4818213
Alignment:
Q  39 gtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataacttt 138  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||   ||| |||||||||| |||||||||||||||||||||||||| || ||||||    
T  4818085 gtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaaggaacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaacttt 4818184  T
Q  139 ttgtctcacgtacaagttgttttaaatac 167  Q
    ||||| |||||||||||||| | ||||||    
T  4818185 ttgtcccacgtacaagttgtctaaaatac 4818213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 18470353 - 18470492
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||  |||| |||||||| ||||||  |||| |||||||||||| |||||||||||| |    
T  18470353 aacaactccagttatccagtgtttgatttgtaaaactgtttcagggacagaacaaactgaaggcaagggacaagacaaaaactgaaatttttgtccctta 18470452  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||||||||| || |||||||| || ||||||||||||||    
T  18470453 ccaaaccacagcacaactttttatcccacgtacaagttgt 18470492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 19 - 153
Target Start/End: Original strand, 32092907 - 32093040
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||  |||||||||| |||||||||| || |||||||||||||| |||||||| |||||    
T  32092907 aacaactccagttgtgcagtgtttgatttgtaaaattgtttcaggaacaggacaaattggaggcaaaggataggacaaaaactgaaatttttgt-cctca 32093005  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaa 153  Q
    |||||||||| || ||||||||||| |||||||||    
T  32093006 ccaaaccacagcacaactttttgtcccacgtacaa 32093040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 40489497 - 40489360
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    |||| |||||||||||||||||||||||||||| || | ||||||||||||||||  ||| ||||||||||| ||||||||||||||||||||| ||||     
T  40489497 ttgttcagtgtttgatttgtaaaactgtttcaggtagaagacaaactggaggcaagggacgggacaaaaactcatatttttgtccctcaccaaatcacag 40489398  T
Q  130 cataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || ||||||||||| ||| |||||||||| | ||||||    
T  40489397 cacaactttttgtcccacatacaagttgtctaaaatac 40489360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 27838999 - 27839146
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||  |||||||  |||||  | ||||||||||||||    
T  27838999 aacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaatggacagga-taaaacataaatttttgtccctca 27839097  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||| || | |||||||||||||| ||||||||||| | ||||||    
T  27839098 ccaaaccataaaacaactttttgtctcatgtacaagttgtctaaaatac 27839146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 5598651 - 5598512
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| |||  ||||||||||||||||  || ||||||||||| ||||||||||||| |||    
T  5598651 aacaactcaagttgtccaatgtttgatttgtaaaactgtttcaggtacgagacaaactggaggcaagggagaggacaaaaacagatatttttgtccttca 5598552  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
     ||||| ||| || ||||||||||||||||||||| ||||    
T  5598551 tcaaacaacagcacaactttttgtctcacgtacaacttgt 5598512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 41459759 - 41459621
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||  ||| ||||||||||||||||||||||| |||||||||||||||||||||  |||| || ||||||| ||||||||||||||||    
T  41459759 aacaactctagttgtttagtatttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaaga-aaaaactcatatttttgtccctca 41459661  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||||||| | || ||||||||||  ||||||||||||||    
T  41459660 ccaaaccagagcacaactttttgttccacgtacaagttgt 41459621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 58 - 167
Target Start/End: Original strand, 5571608 - 5571717
Alignment:
Q  58 ttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttg 157  Q
    ||||| |||||||||||||||||||||  ||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||  ||||||||||||    
T  5571608 ttcaggtacaggacaaactggaggcaagggacaggacaaaaattcatatttttgtccctcaccaaaccacaacacaactttttgtccaacgtacaagttg 5571707  T
Q  158 ttttaaatac 167  Q
    | | ||||||    
T  5571708 tctaaaatac 5571717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 7725733 - 7725873
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| | |||||||||||||||||||| |||||| |||||||| | ||| |||||||||| ||||  |||| |||||||||| |||||||||||| ||    
T  7725733 aaacaacttcagttgtccagtgtttgattagtaaaattgtttcaggtgcagaacaaactggatgcaagggacatgacaaaaactcatatttttgtccttc 7725832  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |  ||||||||||| ||||||||||| |||||| |||||||    
T  7725833 attaaaccacaacacaactttttgtcccacgtataagttgt 7725873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 700525 - 700663
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| || |||||| || || |||||||||||||||||||||| |||| |||||||  ||| |||  ||||  ||||||| | |||||||||| ||||    
T  700525 aaacaactctagttgttcaatgattgatttgtaaaactgtttcaggtacaagacaaacaagagacaagggacaaaacaaaaattcatatttttgttcctc 700624  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagtt 156  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  700625 accaaaccacaacacaactttttgtctcacgtacaagtt 700663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 37148514 - 37148622
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||||||||| | |||||||||||||||||||||||||  |||| |||||||||||||||  ||| ||||||||||||| |||||||| |||||    
T  37148514 aacaactccagttgtcaattgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggacgggacaaaaactgaaatttttgttcctca 37148613  T
Q  119 ccaaaccac 127  Q
    |||||||||    
T  37148614 ccaaaccac 37148622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 167
Target Start/End: Complemental strand, 17031309 - 17031180
Alignment:
Q  38 tgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactt 137  Q
    |||||||||||||||||||||||||  |||| ||||| |||||||||| ||||||||||||||  | ||||||| ||||||  ||| |||| || |||||    
T  17031309 tgtttgatttgtaaaactgtttcagggacagtacaaattggaggcaaaggacaggacaaaaacataaatttttgcccctcattaaatcacagcacaactt 17031210  T
Q  138 tttgtctcacgtacaagttgttttaaatac 167  Q
    || ||| |||||||||||| ||| ||||||    
T  17031209 ttcgtcccacgtacaagttatttaaaatac 17031180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 58 - 151
Target Start/End: Complemental strand, 5673271 - 5673178
Alignment:
Q  58 ttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtac 151  Q
    ||||| |||| || |||||||||||||  |||| | |||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  5673271 ttcaggtacacgataaactggaggcaagggacaagtcaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtac 5673178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 4665002 - 4664923
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaa 98  Q
    ||||| ||||||| |||||||||||||||||||||| |||||||  ||||||||||| ||||||||  |||| |||||||    
T  4665002 aacaactccagttatccagtgtttgatttgtaaaacagtttcagggacaggacaaacaggaggcaagggacatgacaaaa 4664923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 418 - 492
Target Start/End: Complemental strand, 38979357 - 38979283
Alignment:
Q  418 tggcaaaattcgccttccgctaggaacctcaacactaactgctcttacaaccaagctacgtccgtcaacatgaac 492  Q
    |||||||||||||||||| |||||||| | |||| ||||| ||  ||||| ||||||||||||||||||||||||    
T  38979357 tggcaaaattcgccttcctctaggaacattaacagtaactactactacaaacaagctacgtccgtcaacatgaac 38979283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 40182556 - 40182487
Alignment:
Q  98 aactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||| |||||||||||||||||||||||||| || ||||||||||| || ||||||||||| | ||||||    
T  40182556 aacttatatttttgtccctcaccaaaccacatcacaactttttgtcccatgtacaagttgtctaaaatac 40182487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 143
Target Start/End: Complemental strand, 35955150 - 35955046
Alignment:
Q  39 gtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataacttt 138  Q
    ||||||||||||||| ||||||| | ||| |||||||||||||||   |||| |||||||||||| ||| |||| || ||| |||| |||| | || |||    
T  35955150 gtttgatttgtaaaattgtttcaaagacatgacaaactggaggcatgagacaagacaaaaactgaaattcttgttccgcactaaactacaaaacaaattt 35955051  T
Q  139 ttgtc 143  Q
    |||||    
T  35955050 ttgtc 35955046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 304
Target Start/End: Original strand, 4689866 - 4689922
Alignment:
Q  248 tgttatgtcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    |||| |||||||||||||||| | || ||||| | ||||||||||||||||||||||    
T  4689866 tgttctgtcttgtactgttatgtccattacttgctgttttgcaaaccaaacgcaccc 4689922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 11090865 - 11090932
Alignment:
Q  91 ggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||| |||||||| ||| ||| ||||||| || |||| ||| |||||||||||||||||||| |||||    
T  11090865 ggacgaaaactgaaattcttgaccctcactaagccacgacacaactttttgtctcacgtacacgttgt 11090932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 5e-54; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 51264666 - 51264527
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||| |||||||||| |||||||||||||||||||||||||    
T  51264666 agttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactcatatttttgtccctcaccaaaccac 51264567  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||| ||||||||||| |||||||||||||||| ||||||    
T  51264566 aacacaactttttgtcccacgtacaagttgtttaaaatac 51264527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 1351429 - 1351577
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   |||||||||||||| ||||||||||||||||    
T  1351429 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaggaacaggacaaaaactcatatttttgtccctca 1351528  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| ||||||||||| |||||||||||||| | ||||||    
T  1351529 ccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 1351577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 30105674 - 30105822
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  30105674 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtaaaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 30105773  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| |||||||||||||| |||||||||||||| | ||||||    
T  30105774 ccaaaccacagcataactttttgtcccacgtacaagttgtctaaaatac 30105822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 31004304 - 31004164
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   |||||||||||||||||| |||||||||||||||||||||    
T  31004304 cagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcacgggacaggacaaaaactgatgtttttgtccctcaccaaacca 31004205  T
Q  127 caacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||| ||||||||||| |||||||||||||| | ||||||    
T  31004204 caacacaactttttgtcccacgtacaagttgtctaaaatac 31004164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 41973091 - 41972943
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||| ||||||||||||||||    
T  41973091 aacaactctagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctca 41972992  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||  | |||||||||||||||||||||||||| | ||||||    
T  41972991 ccaaaccacactacaactttttgtctcacgtacaagttgtctaaaatac 41972943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 45490869 - 45491017
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||  |||| |||||||||| ||||||||||||||||    
T  45490869 aacaattctagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctca 45490968  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| ||||||||||| |||||||||||||| | ||||||    
T  45490969 ccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 45491017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 16437542 - 16437403
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||    
T  16437542 aacaactctagttgtccaatgtttgatttgtaaaactgtttcagctacaggacaaactagaggcaaaggacaggacaaaaactcatatttttgtccctca 16437443  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  16437442 ccaaaccacaacacaactttttgtcccacgtacaagttgt 16437403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 45659002 - 45658853
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||| |||| |||| |||||||||||||||||||||| |||    
T  45659002 aaacaactccagttgtctagtgtctgatttgtaaaactgtttcaagtacaggacaaactggagacaaaggacaagacaaaaactgatatttttgtcgctc 45658903  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  45658902 accaaaccacaacacaactttttgtcccacctacaagttgttttaaatac 45658853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 844718 - 844866
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||  ||||||||||||||| ||||||||||||||||    
T  844718 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctca 844817  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  844818 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 844866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 6711040 - 6711188
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||  ||||||||||||||| ||||||||||||||||    
T  6711040 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctca 6711139  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| || |||||||| |||||||||||||| | ||||||    
T  6711140 ccaaaccacaacacaattttttgtcccacgtacaagttgtctaaaatac 6711188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 11772626 - 11772774
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||| | ||| ||||||||||| |||| |||||||||||||||||||||||||||    
T  11772626 aacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaaggcaatctggaggcaaaggacaagacaaaaactgatatttttgtccctca 11772725  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| ||| ||||| |||||||||||||    
T  11772726 ccaaaccacagcacaactttttgtcccacctacaaattgttttaaatac 11772774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 26118209 - 26118357
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  26118209 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacaggacaaaaactcatatttttgtccctca 26118308  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||| |||| || ||||||||||| |||||| ||||||| | ||||||    
T  26118309 ccaaatcacagcacaactttttgtcccacgtaaaagttgtctaaaatac 26118357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 6029295 - 6029434
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||  ||||||||||||||||| ||||||||||||||    
T  6029295 aacaactccagttgtccagtgtttgatttgtaaaactgtttcagggacagaacaaactgaaggcaagggacaggacaaaaactgaaatttttgtccctca 6029394  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  6029395 ccaaaccacaacacaactttttgtcccacgtacaagttgt 6029434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 17888129 - 17887980
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| || |||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  17888129 aaacaactctagttgtccggtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctc 17888030  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
     ||||||||||||| ||||||||||| |||||||||||||| | ||||||    
T  17888029 gccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 17887980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 16387034 - 16386886
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||| ||| |||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||  ||||||||||||||| ||||||||||||||||    
T  16387034 aacagttctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctca 16386935  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  16386934 ccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatac 16386886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 16451307 - 16451159
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||| ||||    
T  16451307 aacaactctagttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtctctca 16451208  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| ||||||||||| ||| |||||||||| | ||||||    
T  16451207 ccaaaccacaacacaactttttgtcccacatacaagttgtctaaaatac 16451159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 28340297 - 28340445
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  |||| |||||||||| ||||||||||||||||    
T  28340297 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaagacaaaaactcatatttttgtccctca 28340396  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
     ||||||||| || |||||||||||||||||||||||||| | ||||||    
T  28340397 tcaaaccacagcacaactttttgtctcacgtacaagttgtctaaaatac 28340445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 32289338 - 32289486
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||  |||| |||||||||| ||||||||||||||||    
T  32289338 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggacaagacaaaaactcatatttttgtccctca 32289437  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||  |||||||||||||||| ||||||    
T  32289438 ccaaaccacagcacaactttttgttccacgtacaagttgtttaaaatac 32289486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 35387305 - 35387453
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||  ||||||||||||||| ||||||||||||||||    
T  35387305 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggtaagggacaggacaaaaactcatatttttgtccctca 35387404  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||  |||||||||||||| | ||||||    
T  35387405 ccaaaccacagcacaactttttgttccacgtacaagttgtctaaaatac 35387453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 41967843 - 41967991
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||  |||| |||||||||| |||||||||||||| |    
T  41967843 aacaactctagttgtccagtatttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagagacaagacaaaaactcatatttttgtccctta 41967942  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  41967943 ccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatac 41967991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 7184089 - 7183950
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||||||||||| ||||||||||    
T  7184089 agttgtccagtgtttgatatgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccac 7183990  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||| |||||||||||  ||||||||||||| | ||||||    
T  7183989 aacacaactttttgtcctacgtacaagttgtctaaaatac 7183950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 32270533 - 32270394
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  32270533 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtagaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 32270434  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||||||||| || ||||||||||| || |||||||||||    
T  32270433 ccaaaccacagcacaactttttgtcccatgtacaagttgt 32270394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 27 - 158
Target Start/End: Original strand, 42512772 - 42512903
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  42512772 cagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtgcctcagcaaacca 42512871  T
Q  127 caacataactttttgtctcacgtacaagttgt 158  Q
    ||||| |||||||||||  |||||||| ||||    
T  42512872 caacacaactttttgtcctacgtacaaattgt 42512903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 26764789 - 26764937
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||||||||||||||||||||||||| || ||||| || |||| || |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  26764789 aacaactccagttgtccagtgtttgatttgtacaattgttttaggtacaagataaactggaggcaaaggacaggacaaaaacttatatttttgtccctca 26764888  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || |||||||||| ||||||||||| |||||||||||||| | ||||||    
T  26764889 ccgaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 26764937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 12890418 - 12890279
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||  ||||||||||||||| ||||||||||||||||    
T  12890418 aacaactctagttgtccagtgtttgatttgtaaaactgtttctggtacaggataaactggaggcaagggacaggacaaaaactcatatttttgtccctca 12890319  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
     ||||||||| || ||||||||||| ||||||||||||||    
T  12890318 tcaaaccacagcacaactttttgtcccacgtacaagttgt 12890279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 42510696 - 42510557
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||  ||||||||||||||| ||||||||||| |||||||||||||    
T  42510696 agttgtccagtgtttgattcgtaaaactgtttcaggtacaggacaaactggagacaagggacaggacaaaaactcatatttttgtctctcaccaaaccac 42510597  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | || ||||||||||| |||||||||||||| | ||||||    
T  42510596 agcacaactttttgtcccacgtacaagttgtctaaaatac 42510557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 50304831 - 50304692
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   ||| ||||||||||||||||||||||||||     
T  50304831 aacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacaagacaaaaactgatatttttgtccctct 50304732  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
     ||||||||| || |||||||||||||||||  |||||||    
T  50304731 gcaaaccacagcacaactttttgtctcacgtttaagttgt 50304692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 50540515 - 50540376
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||  ||||||||| ||||| |||||||||||| ||| ||||||||    
T  50540515 agttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagggacaggacataaactcatatttttgtccttcatcaaaccac 50540416  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||| ||||||||||| |||||||||||||| | ||||||    
T  50540415 aacacaactttttgtcccacgtacaagttgtctaaaatac 50540376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 16476158 - 16476297
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||  ||||||| ||||||| |||||||||||||||||||||||||    
T  16476158 agttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagatgcaagggacaggataaaaactcatatttttgtccctcaccaaaccac 16476257  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
      || ||||||||||| |||||||||||||| | ||||||    
T  16476258 ggcacaactttttgtcccacgtacaagttgtctaaaatac 16476297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 17327642 - 17327777
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| || ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||  ||||||||||||||| |||||||||||||||    
T  17327642 aaacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggagtcaagggacaggacaaaaactcatatttttgtccctc 17327741  T
Q  118 accaaaccacaacataactttttgtctcacgtacaa 153  Q
    |||||| |||| || |||||||||||||| ||||||    
T  17327742 accaaatcacagcacaactttttgtctcatgtacaa 17327777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 24339632 - 24339781
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||| |||||||||||||||| ||||||||||| |||| ||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  24339632 aacaactctagttgttcagtgtttgatttgtataactgtttcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 24339731  T
Q  119 cc-aaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || ||||||||||| |||||||| || |||||||||||||| | ||||||    
T  24339732 ccaaaaccacaacacaactttttttcccacgtacaagttgtctaaaatac 24339781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 27 - 167
Target Start/End: Original strand, 13994077 - 13994217
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||||||||||||||||||||||||||||||||   ||| |||||| |||||||||   || ||||||||||||| ||||||||||||||||||||||    
T  13994077 cagttgtccagtgtttgatttgtaaaactgtttcatggacatgacaaattggaggcaaggaactggacaaaaactgaaatttttgtccctcaccaaacca 13994176  T
Q  127 caacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||| |||||||||||||| ||||||||||| | ||||||    
T  13994177 caacacaactttttgtctcatgtacaagttgtctaaaatac 13994217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 5109908 - 5109769
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| |||| |||||| |||||||||  ||||||||||||||| || |||||||||||||    
T  5109908 aacaactccagttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaattggaggcaagggacaggacaaaaactcatgtttttgtccctca 5109809  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||||||||| || |||||||||||  | |||||||||||    
T  5109808 ccaaaccacatcacaactttttgtccaaagtacaagttgt 5109769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 39282066 - 39281926
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    ||||||| ||||||||||||||||||||||||| || ||||||||||||| || ||||  ||||||||||||||| ||||||||||||||||||||||||    
T  39282066 cagttgttcagtgtttgatttgtaaaactgtttaaggtacaggacaaactagatgcaagggacaggacaaaaactcatatttttgtccctcaccaaacca 39281967  T
Q  127 caacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||  | |||||||||||  ||||||||||||| | ||||||    
T  39281966 cagtacaactttttgtcctacgtacaagttgtctaaaatac 39281926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 44738047 - 44738175
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    ||||||||||||| ||||||||||||||||||| |||| |||||  |||||||||  |||||||| |||||| ||||||||||||||||||||||||||     
T  44738047 ttgtccagtgtttaatttgtaaaactgtttcaggtacatgacaacttggaggcaagggacaggaccaaaactcatatttttgtccctcaccaaaccacat 44738146  T
Q  130 cataactttttgtctcacgtacaagttgt 158  Q
    || ||||||||||| ||||||||||||||    
T  44738147 cacaactttttgtcccacgtacaagttgt 44738175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 16704895 - 16704758
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    ||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||  |||| |||||||||  |||||||||||||| |||||||||||     
T  16704895 ttgtccaatgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacacgacaaaaacatatatttttgtcccttaccaaaccacat 16704796  T
Q  130 cataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || |||| |||||||||| |||||||||| | ||||||    
T  16704795 cacaactctttgtctcacatacaagttgtctaaaatac 16704758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 42705242 - 42705371
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaa-ctgatatttttgtccctcaccaaaccaca 128  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||| |||  ||| ||| ||||| || ||||||||||||||||||||||||||    
T  42705242 ttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagggacgggaaaaaaaactcatatttttgtccctcaccaaaccaca 42705341  T
Q  129 acataactttttgtctcacgtacaagttgt 158  Q
    ||| ||||||| ||| ||||||||||||||    
T  42705342 acacaacttttcgtcccacgtacaagttgt 42705371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 1601342 - 1601205
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||  || || |||||||||   |||||||||||||||||||||||    
T  1601342 agttgttcagtgtttgatttgtaaaacggtttcaggtacaggacaaactggaggcaagggatagaacaaaaact--catttttgtccctcaccaaaccac 1601245  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||| ||||||||||| ||| |||||||||| | ||||||    
T  1601244 aacacaactttttgtcccacatacaagttgtctaaaatac 1601205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 27 - 158
Target Start/End: Original strand, 6143988 - 6144119
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||||||| ||||||||||||||||| |||||||| ||| ||||||||||||||||  ||||||||||||||||  |||||||||||||  |||||||    
T  6143988 cagttgtccaatgtttgatttgtaaaacagtttcagagacatgacaaactggaggcaagggacaggacaaaaactgcaatttttgtccctcggcaaacca 6144087  T
Q  127 caacataactttttgtctcacgtacaagttgt 158  Q
    ||||| |||||||| || |||||| |||||||    
T  6144088 caacacaactttttctcccacgtagaagttgt 6144119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 15539884 - 15540023
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||||||||||||||||||||||||||||||||||||   |||| |||||||||||||||  |||||||||||| |||| | |||||||  |||    
T  15539884 aacaactccagttgtccagtgtttgatttgtaaaactgtttcaaggacagaacaaactggaggcaagagacaggacaaaacctgaaacttttgtctttca 15539983  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||||||||| || |||||||||||  ||||| |||||||    
T  15539984 ccaaaccacagcacaactttttgtcatacgtagaagttgt 15540023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 25539975 - 25539887
Alignment:
Q  79 aggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  25539975 aggcaaaggacaagacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacctacaagttgttttaaatac 25539887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 50382411 - 50382536
Alignment:
Q  36 agtgtttgatttgtaaaactgtttcagatacaggacaaactggagg---caaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacat 132  Q
    |||||||||||| ||||||||||||||  |||  ||||||||||||   |||  ||||||||||||||||| |||||||||| ||||||||||||||||     
T  50382411 agtgtttgatttttaaaactgtttcagggacataacaaactggaggaggcaatggacaggacaaaaactgaaatttttgtccttcaccaaaccacaacac 50382510  T
Q  133 aactttttgtctcacgtacaagttgt 158  Q
    ||||||||||| ||||||||||||||    
T  50382511 aactttttgtcccacgtacaagttgt 50382536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 167
Target Start/End: Original strand, 3414861 - 3414995
Alignment:
Q  33 tccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacat 132  Q
    ||||||||||||||||||||||| ||| || ||| |||||| |||||| | |  ||||||||||||||| |||||||||||||||||||||| ||| |||    
T  3414861 tccagtgtttgatttgtaaaactattttaggtactggacaatctggagacgagggacaggacaaaaactcatatttttgtccctcaccaaactacatcat 3414960  T
Q  133 aactttttgtctcacgtacaagttgttttaaatac 167  Q
    || ||||| || ||||||| |||||||| ||||||    
T  3414961 aattttttatcccacgtactagttgtttaaaatac 3414995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 153
Target Start/End: Complemental strand, 10384547 - 10384413
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||| |||||||||||||||||| | |||||| ||||| ||||| |||| ||||| |||| |||||||||| |||||||||||| |||    
T  10384547 aacaactctagttgtctagtgtttgatttgtaaaattatttcaggtacagtacaaattggatgcaaaggacaagacaaaaactcatatttttgtccttca 10384448  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaa 153  Q
    | |||||||| || ||||||||||| |||||||||    
T  10384447 ctaaaccacagcacaactttttgtcccacgtacaa 10384413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 49303359 - 49303496
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    ||||||||||||||||||||||||||||||||| || | |||||||||||| |||  |||| || ||||||| |||||||||||| |||||||||||||     
T  49303359 ttgtccagtgtttgatttgtaaaactgtttcaggtataagacaaactggagacaagggacaagagaaaaactcatatttttgtccttcaccaaaccacag 49303458  T
Q  130 cataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || || ||||| ||  ||||||||||||| | ||||||    
T  49303459 cacaattttttatcctacgtacaagttgtctaaaatac 49303496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 51703169 - 51703305
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    |||||||||||||||||||||||| |||||||  ||||||| |||||| ||||||  ||||| ||||||||| |||||||||| ||||||| ||||||||    
T  51703169 ttgtccagtgtttgatttgtaaaattgtttcaagtacaggataaactgaaggcaagggacagaacaaaaactcatatttttgttcctcacc-aaccacaa 51703267  T
Q  130 cataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || ||||||||||| ||| |||| ||||| | ||||||    
T  51703268 cacaactttttgtcccacctacatgttgtctaaaatac 51703305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 38086989 - 38087129
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| | ||||||||| ||||||||||| |||||| ||||||  ||||||| ||| |||| ||||  |||| |||||||||| |||||||||||| ||    
T  38086989 aaacaacttcagttgtcctgtgtttgatttataaaacagtttcaagtacaggataaaatggatgcaatggacatgacaaaaactcatatttttgtccttc 38087088  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    || |||||||| || ||||||||||| || |||||||||||    
T  38087089 actaaaccacatcacaactttttgtcccaagtacaagttgt 38087129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 158
Target Start/End: Complemental strand, 7837305 - 7837174
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    ||||||| ||||||||||||||||||||||||||||  ||| |||||||| |||||||  |||| |||||||| |||  ||||||||| | |||||| ||    
T  7837305 cagttgttcagtgtttgatttgtaaaactgtttcaggaacatgacaaactagaggcaagggacatgacaaaaattgaattttttgtccattaccaaatca 7837206  T
Q  127 caacataactttttgtctcacgtacaagttgt 158  Q
    || || |||||||||||||||  |||||||||    
T  7837205 catcacaactttttgtctcacagacaagttgt 7837174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 129
Target Start/End: Complemental strand, 46155076 - 46154977
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    |||| ||||||||||||||||||| | |||||| ||| ||||||||||||||  |  ||||||||||||||| |||||||||||||||||||||| ||||    
T  46155076 ttgttcagtgtttgatttgtaaaattatttcaggtactggacaaactggaggtgagggacaggacaaaaactcatatttttgtccctcaccaaactacaa 46154977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 8839077 - 8838983
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtc 113  Q
    ||||| |||| ||||||| ||||||||||||||||||||||| | |||| ||||||||||||| ||  |||| ||||||||||||||||||||||    
T  8839077 aacaactccaattgtccaatgtttgatttgtaaaactgtttctggtacaagacaaactggaggaaatggacatgacaaaaactgatatttttgtc 8838983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 309 - 412
Target Start/End: Complemental strand, 16103254 - 16103149
Alignment:
Q  309 agttttgttaggacaaacgctaaagaggtctagatatggacctagttttatgaa--aagtctatagagaattgaatctcactaccaagtggaaatccagg 406  Q
    |||||| ||||| |||| ||||||||||| ||||||||| |  ||| |||||||  |||||||||||||||| ||||||||||||||| |||||||||||    
T  16103254 agttttattaggccaaatgctaaagaggtttagatatgggctgagtgttatgaaccaagtctatagagaattcaatctcactaccaagcggaaatccagg 16103155  T
Q  407 aaattc 412  Q
    ||||||    
T  16103154 aaattc 16103149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 20494927 - 20495005
Alignment:
Q  44 atttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaa 122  Q
    |||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||| |||||||||||| |||||||    
T  20494927 atttgtaaaattgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccatcaccaa 20495005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 25343213 - 25343342
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaat-gacaggacaaaaactgatatttttgtccctcaccaaaccaca 128  Q
    |||||| | ||||||||| |||||| |||||| ||||||||||||||||| |||||| || |||| ||||||  |||||||||||| |||| |||||| |    
T  25343213 ttgtcctgcgtttgatttataaaacagtttcatatacaggacaaactggatgcaaatggataggataaaaacacatatttttgtccttcactaaaccata 25343312  T
Q  129 acataactttttgtctcacgtacaagttgt 158  Q
      | ||||||||||| ||||||||||||||    
T  25343313 gtacaactttttgtcgcacgtacaagttgt 25343342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 158
Target Start/End: Complemental strand, 39792977 - 39792848
Alignment:
Q  29 gttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccaca 128  Q
    ||||| |||||||||||||| |||||||||| ||  ||| || ||| ||||| |||| || | |||||||| ||| ||| |||||| |||||||||||||    
T  39792977 gttgtacagtgtttgatttgcaaaactgttttagggacaagataaattggagacaaaagatatgacaaaaattgaaattcttgtccttcaccaaaccaca 39792878  T
Q  129 acataactttttgtctcacgtacaagttgt 158  Q
    ||| ||||| |||| |||||||||| ||||    
T  39792877 acacaacttgttgtttcacgtacaaattgt 39792848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 158
Target Start/End: Complemental strand, 570549 - 570427
Alignment:
Q  39 gtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatg-acaggacaaaaactgatatttttgtccctcaccaaaccacaa--cataac 135  Q
    ||||||||| ||||| ||||||||  ||| || |||||||||||||| | ||| || |||||| || |||||||||||||||||||||||||  || |||    
T  570549 gtttgatttataaaattgtttcagcgacaagataaactggaggcaaagggacatgataaaaacagaaatttttgtccctcaccaaaccacaatgcacaac 570450  T
Q  136 tttttgtctcacgtacaagttgt 158  Q
    |||||||||| |||| |||||||    
T  570449 tttttgtctcgcgtataagttgt 570427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 147
Target Start/End: Complemental strand, 7837546 - 7837426
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    ||||||| ||||||||||||| ||||||||||||||  ||| |||||||| ||||||   |||| |||||||| |||  ||||||||| | | |||| ||    
T  7837546 cagttgttcagtgtttgatttataaaactgtttcaggaacatgacaaactagaggcaggggacatgacaaaaattgaattttttgtccattatcaaatca 7837447  T
Q  127 caacataactttttgtctcac 147  Q
    || || |||||||||||||||    
T  7837446 catcacaactttttgtctcac 7837426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 304
Target Start/End: Complemental strand, 25539792 - 25539736
Alignment:
Q  248 tgttatgtcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    ||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||    
T  25539792 tgttatgtcttgtactgttatgtccagtacttaccgttttgcaaaccaaacgcaccc 25539736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 401
Target Start/End: Complemental strand, 27005136 - 27005051
Alignment:
Q  314 tgttaggacaaacgctaaagaggtctagatatggacctagttttatgaaaagtctatagagaattgaatctcactaccaagtggaaat 401  Q
    ||||||| |||||||||||||||| ||||||||| |  ||| |||||||  |||||||||||||| ||||||||||||||| ||||||    
T  27005136 tgttaggccaaacgctaaagaggtttagatatgggctgagtgttatgaa--gtctatagagaattcaatctcactaccaagcggaaat 27005051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 23799604 - 23799671
Alignment:
Q  92 gacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgtt 159  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||| || |||||  ||||||||    
T  23799604 gacaaaaactgatatttttgtccctcaccaaaccacagcacaactttttatcgcacgtttaagttgtt 23799671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 248 - 302
Target Start/End: Original strand, 11772869 - 11772923
Alignment:
Q  248 tgttatgtcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcac 302  Q
    ||||||||||||||||||||| | |||||||||| ||||||||||||||||||||    
T  11772869 tgttatgtcttgtactgttatgtccagtacttaccgttttgcaaaccaaacgcac 11772923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 21071783 - 21071729
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaa 84  Q
    |||||||||||||||||||||||| |||||||| |||| ||||||||||||||||    
T  21071783 ttgtccagtgtttgatttgtaaaattgtttcaggtacatgacaaactggaggcaa 21071729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 167
Target Start/End: Complemental strand, 26733716 - 26733587
Alignment:
Q  38 tgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactt 137  Q
    ||||||||||||||||||||||     || ||||||||| ||| | |  |||| |||||||||||| ||| ||||||| ||| |||||| |||| |||||    
T  26733716 tgtttgatttgtaaaactgtttttaggaccggacaaactagagacgatggacatgacaaaaactgaaattcttgtcccccactaaaccataacacaactt 26733617  T
Q  138 tttgtctcacgtacaagttgttttaaatac 167  Q
    |||| |||| ||||||||||| | ||||||    
T  26733616 tttgcctcatgtacaagttgtctaaaatac 26733587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 38663234 - 38663173
Alignment:
Q  97 aaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||||| ||||||||||||||| ||||||||| || ||||||||||| ||||||||||||||    
T  38663234 aaactggtatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgt 38663173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 167
Target Start/End: Original strand, 504393 - 504533
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    ||||||| ||| |||||||||| |||| ||||| ||  ||| |||||||| |||||||  ||||  ||||||||||| | ||||||| ||||| ||||||    
T  504393 cagttgtacagcgtttgatttgcaaaattgttttagggacaagacaaacttgaggcaagggacaacacaaaaactgaaaattttgtctctcactaaacca 504492  T
Q  127 caacataactttttgtctcacgtacaagttgttttaaatac 167  Q
     |||| || |||||||| ||| || ||||||| | ||||||    
T  504493 taacacaattttttgtcccacatagaagttgtctaaaatac 504533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 38663287 - 38663228
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactgg 78  Q
    ||||| |||||||||||||||||||||||||||||||||||||   |||||| |||||||    
T  38663287 aacaactccagttgtccagtgtttgatttgtaaaactgtttcaaggacaggataaactgg 38663228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 17291757 - 17291622
Alignment:
Q  20 acaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcac 119  Q
    |||| ||||||||| | || ||||||||||||||||||||     |||||| ||  || || |||  ||||||||||||||  | ||||||||||| |||    
T  17291757 acaactccagttgtacggtatttgatttgtaaaactgtttttaggacaggataagttgaagtcaagagacaggacaaaaacataaatttttgtccc-cac 17291659  T
Q  120 caaaccacaacataactttttgtctcacgtacaagtt 156  Q
     ||||||||||| ||||||||||| | ||||||||||    
T  17291658 taaaccacaacaaaactttttgtccctcgtacaagtt 17291622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 3560163 - 3560271
Alignment:
Q  38 tgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactt 137  Q
    ||||||||||||||| |||| | ||| | ||||||||||| | ||||  ||||  ||||||| | | | |||||||||| || ||||||||||| |||||    
T  3560163 tgtttgatttgtaaatctgtcttagagataggacaaactgaaagcaatggacaaaacaaaaatttaaagttttgtcccttactaaaccacaacacaactt 3560262  T
Q  138 tttgtctca 146  Q
    ||| |||||    
T  3560263 tttatctca 3560271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 157
Target Start/End: Complemental strand, 6771530 - 6771410
Alignment:
Q  37 gtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataact 136  Q
    ||||||||||| ||||||||||| ||  ||| || ||| | ||| |||  |||| |||||||||| | ||| ||||| ||||| ||| ||||||| ||||    
T  6771530 gtgtttgatttataaaactgttttagggacatgataaattagagacaagggacaagacaaaaactaaaattcttgtcactcactaaatcacaacacaact 6771431  T
Q  137 ttttgtctcacgtacaagttg 157  Q
    |||| || ||| |||||||||    
T  6771430 ttttctcccacatacaagttg 6771410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 35335863 - 35335775
Alignment:
Q  36 agtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaac 124  Q
    |||||||||||||||||||||||  ||| |||  ||||| ||||| |||  |||| ||||||||| |||||| ||||| ||||| ||||    
T  35335863 agtgtttgatttgtaaaactgttgtagagacataacaaaatggagacaagagacatgacaaaaaccgatattcttgtctctcactaaac 35335775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 298
Target Start/End: Original strand, 38087233 - 38087283
Alignment:
Q  248 tgttatgtcttgtactgttatcttcagtacttacagttttgcaaaccaaac 298  Q
    |||| |||||||||||||||| | |||||||||  ||||||||||||||||    
T  38087233 tgttctgtcttgtactgttatgtccagtacttaatgttttgcaaaccaaac 38087283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 7183847 - 7183798
Alignment:
Q  255 tcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    |||||||||||| | | |||||||||| |||||||||||||||| |||||    
T  7183847 tcttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccc 7183798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 466
Target Start/End: Complemental strand, 16101863 - 16101814
Alignment:
Q  417 gtggcaaaattcgccttccgctaggaacctcaacactaactgctcttaca 466  Q
    |||||||||||||||||||  ||| |||||||||||||||| || |||||    
T  16101863 gtggcaaaattcgccttcctatagaaacctcaacactaactacttttaca 16101814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 1351679 - 1351731
Alignment:
Q  255 tcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcacccgta 307  Q
    |||||||||||| | |  ||||||||| |||||||||||||||| ||||||||    
T  1351679 tcttgtactgttctgtcaagtacttactgttttgcaaaccaaacacacccgta 1351731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 298
Target Start/End: Complemental strand, 10384298 - 10384254
Alignment:
Q  254 gtcttgtactgttatcttcagtacttacagttttgcaaaccaaac 298  Q
    |||||||||||||||   |||||||||| ||||||||||||||||    
T  10384298 gtcttgtactgttatgcccagtacttactgttttgcaaaccaaac 10384254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 34283883 - 34283947
Alignment:
Q  92 gacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagtt 156  Q
    |||||||| ||| ||| |||||  |||  ||||||||||| |||||||| |||||||||||||||    
T  34283883 gacaaaaattgaaattattgtctttcaataaaccacaacacaactttttatctcacgtacaagtt 34283947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 3e-52; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 37308826 - 37308678
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  37308826 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 37308727  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| ||||||||||| ||||||||| |||| | ||||||    
T  37308726 ccaaaccacaacacaactttttgtcccacgtacaaattgtctaaaatac 37308678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 9732849 - 9732988
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||| |||||||||| ||||||||||||||||    
T  9732849 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactcatatttttgtccctca 9732948  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  9732949 ccaaaccacaacacaactttttgtcccacgtacaagttgt 9732988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 31 - 167
Target Start/End: Complemental strand, 7259056 - 7258920
Alignment:
Q  31 tgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaac 130  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||| |    
T  7259056 tgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagc 7258957  T
Q  131 ataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | |||||||||||||||||||||||||| | ||||||    
T  7258956 acaactttttgtctcacgtacaagttgtctaaaatac 7258920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 7761492 - 7761640
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||  ||||||||||||||| ||||||||||||||||    
T  7761492 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactagaggcaagggacaggacaaaaactcatatttttgtccctca 7761591  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || |||||||||||||||||||||||||| | ||||||    
T  7761592 ccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaatac 7761640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 17540886 - 17540738
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||||||  ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  17540886 aacaattttagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 17540787  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  17540786 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 17540738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 26981628 - 26981776
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||| |||||||||| ||||||||||||||||    
T  26981628 aacaactccagttgtccagtgtttgatttgtaaaactgttccagatacaagacaaacgggaggcaaatgacatgacaaaaactcatatttttgtccctca 26981727  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| ||||||||||   ||||||||||||| | ||||||    
T  26981728 ccaaaccacaacaaaactttttgttctacgtacaagttgtctaaaatac 26981776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 42706530 - 42706382
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  || | |||||||||| ||||||||||||||||    
T  42706530 aacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggataagacaaaaactcatatttttgtccctca 42706431  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| ||||||||||| ||| |||||||||| | ||||||    
T  42706430 ccaaaccacaacacaactttttgtcccacatacaagttgtctaaaatac 42706382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 16104436 - 16104297
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  16104436 agttgtccagtgtttgatttgtaaaactgtttcagatacacgacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccac 16104337  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | || ||||||||||||||||||||| |||| | ||||||    
T  16104336 agcacaactttttgtctcacgtacaaattgtctaaaatac 16104297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 28 - 158
Target Start/End: Complemental strand, 18685998 - 18685868
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||| ||||||||||| |||||||||||||    
T  18685998 agttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacaagacaaaaactcatatttttgtctctcaccaaaccac 18685899  T
Q  128 aacataactttttgtctcacgtacaagttgt 158  Q
    | || ||||||||||| ||||||||||||||    
T  18685898 agcacaactttttgtcccacgtacaagttgt 18685868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 16177802 - 16177950
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||| ||||||||||||||||||||||||||||||||  ||||||| |||||||||||||  ||||||||| ||||||||||||||||| || |    
T  16177802 aacaactccaattgtccagtgtttgatttgtaaaactgtttcaagtacaggataaactggaggcaatggacaggacataaactgatatttttgtcgctta 16177901  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  16177902 ccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatac 16177950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 19513608 - 19513756
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||| |||| ||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  19513608 aacaactctagttttccaatgtttgatttgtaaaactgtttcaggtacaggacaaacgggaggcaaaggacaggacaaaaactcatatttttgtccctca 19513707  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  19513708 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 19513756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 33366781 - 33366633
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||||||| |||||    
T  33366781 aacaattctaattgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgttcctca 33366682  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| |||||||| || ||| |||||||||| | ||||||    
T  33366681 ccaaaccacaacacaactttttctcccacatacaagttgtctaaaatac 33366633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 33889414 - 33889266
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||| |||||||| |||||||    
T  33889414 aacaactctagttgtctagtgtttgatttgtaaaattgtttcagatacaggacaaactggaggcaagggacaggacaaaaactcatatttttttccctca 33889315  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  33889314 ccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatac 33889266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 34338981 - 34338833
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||| ||||||    
T  34338981 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgaccctca 34338882  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||| ||||||||| | ||||||    
T  34338881 ccaaaccacagcacaactttttgtcccacgcacaagttgtctaaaatac 34338833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 35114947 - 35114808
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  35114947 agttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccac 35114848  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||| || |||||||| |||||||||||||| | ||||||    
T  35114847 aacacaattttttgtcccacgtacaagttgtctaaaatac 35114808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 28 - 155
Target Start/End: Original strand, 40832397 - 40832524
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||||||||||||||||||| || |||||| |||| ||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||    
T  40832397 agttgtccagtgtttgatttgtaaagctatttcaggtacaagacaaactggaggcaagggacaggacaaaaacggatatttttgtccctcaccaaaccac 40832496  T
Q  128 aacataactttttgtctcacgtacaagt 155  Q
    |||| |||||||||||||||||||||||    
T  40832497 aacacaactttttgtctcacgtacaagt 40832524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 2645006 - 2645153
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || || |||||||||||| ||||||||||||||||    
T  2645006 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc-aaggagaggacaaaaactcatatttttgtccctca 2645104  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| ||| |||||||||| | ||||||    
T  2645105 ccaaaccacagcacaactttttgtcccacatacaagttgtctaaaatac 2645153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 32498086 - 32497938
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||  ||||||||||||||| |||||||||| |||||    
T  32498086 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaagggacaggacaaaaactcatatttttgtacctca 32497987  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  32497986 ccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatac 32497938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 32766434 - 32766544
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  32766434 ttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaaactgatatttttgtccctcaccaaaccacaa 32766533  T
Q  130 cataacttttt 140  Q
    || ||||||||    
T  32766534 cacaacttttt 32766544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 28 - 158
Target Start/End: Complemental strand, 44284791 - 44284661
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||  |||| |||||||||| ||||||||||||||||| |||||||    
T  44284791 agttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaagacaaaaactcatatttttgtccctcactaaaccac 44284692  T
Q  128 aacataactttttgtctcacgtacaagttgt 158  Q
    | || ||||||||||||||||||||||||||    
T  44284691 agcacaactttttgtctcacgtacaagttgt 44284661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 3913378 - 3913527
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||   |||||||||||||| | || ||||||||||    
T  3913378 aaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtatatgacaaactggaggcaagaaacaggacaaaaactcacatgtttgtccctc 3913477  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||||||| ||||||||||  |||||||||||||| | ||||||    
T  3913478 accaaaccacaacacaactttttgttccacgtacaagttgtctaaaatac 3913527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 30326260 - 30326398
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   ||||||||||||||| ||| ||||||| ||| |||||||||    
T  30326260 agttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaggggacaggacaaaaactcata-ttttgtctctcgccaaaccac 30326358  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | || |||||||||||||||||||||||||| | ||||||    
T  30326359 agcacaactttttgtctcacgtacaagttgtctaaaatac 30326398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 5278771 - 5278901
Alignment:
Q  37 gtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataact 136  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||| || || |    
T  5278771 gtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaatt 5278870  T
Q  137 ttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||| |||||||||||||| | ||||||    
T  5278871 ttttgtcccacgtacaagttgtctaaaatac 5278901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 27 - 167
Target Start/End: Original strand, 28824484 - 28824624
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| |||  | ||||||||||||| ||||||||||||||||||||||||    
T  28824484 cagttgtccagtgtttgatttgtaaaactgtttcaggtacagcacatactggagtcaagggtcaggacaaaaactcatatttttgtccctcaccaaacca 28824583  T
Q  127 caacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || || |||||||| |||||||| |||||||| | ||||||    
T  28824584 catcacaactttttatctcacgtgcaagttgtctaaaatac 28824624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 27 - 158
Target Start/End: Complemental strand, 6896331 - 6896200
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    ||||||||||||||||||||||||||||||||||||  |||  |||||||||||||||  ||||||| ||||||||| |||||||||||||||||||| |    
T  6896331 cagttgtccagtgtttgatttgtaaaactgtttcagggacaaaacaaactggaggcaagggacaggataaaaactgaaatttttgtccctcaccaaacaa 6896232  T
Q  127 caacataactttttgtctcacgtacaagttgt 158  Q
    || || ||||||||||| ||||||||||||||    
T  6896231 cagcacaactttttgtcccacgtacaagttgt 6896200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 30798407 - 30798545
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacagg-acaaaaactgatatttttgtccctc 117  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  |||||| | ||||||| |||||||||||||||    
T  30798407 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggaaaaaaaactcatatttttgtccctc 30798506  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagtt 156  Q
    ||||||||||| || |||||||| || ||||||||||||    
T  30798507 accaaaccacatcacaactttttatcccacgtacaagtt 30798545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 12672402 - 12672541
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||||| |||||||||||||||||||||||||| || ||||||||||||||||||  ||| |||||||| || |||||||||||||||||||||||||    
T  12672402 agttgtcctgtgtttgatttgtaaaactgtttcaggtataggacaaactggaggcaagggacgggacaaaatctcatatttttgtccctcaccaaaccac 12672501  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||| || ||||| || || ||||||||||| | ||||||    
T  12672502 aacacaagtttttatcccaagtacaagttgtctaaaatac 12672541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 39461485 - 39461337
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||   |||||||||||||    
T  39461485 aacaattttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagtgacaggacaaaaattg---tttttgtccctca 39461389  T
Q  119 ccaa---accacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||   || |||||| |||||||| ||||||||||||| ||| | ||||||    
T  39461388 ccaaatcacaacaacacaactttttatctcacgtacaagctgtctaaaatac 39461337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 25 - 167
Target Start/End: Original strand, 38992996 - 38993138
Alignment:
Q  25 tccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaac 124  Q
    |||||||||||||||||||||||||||||| |||||||  | ||||||||||||||||||  |||||||||||||||   |||||||| ||||  |||||    
T  38992996 tccagttgtccagtgtttgatttgtaaaacagtttcaggaagaggacaaactggaggcaagggacaggacaaaaactacaatttttgttcctcgtcaaac 38993095  T
Q  125 cacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||| ||||||||||| |||||||||||||| | ||||||    
T  38993096 cacaacacaactttttgtcccacgtacaagttgtctaaaatac 38993138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 41366029 - 41366177
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||| |||| || |||||||||||| |||| |||||||  ||| ||||||||||||||||  || |||||||||||||| ||||||||||||||    
T  41366029 aacaactccaattgtgcaatgtttgatttgtgaaacagtttcagggacatgacaaactggaggcaagagataggacaaaaactgaaatttttgtccctca 41366128  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| || |||||||||||| |||||||||| | ||||||    
T  41366129 ccaaaccacaacacaattttttgtctcacatacaagttgtctaaaatac 41366177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 42365748 - 42365600
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||| ||||||||||||||||||| ||||||| |||| ||||||||||||||||  |||| |||||||||| |||||||||||| |||    
T  42365748 aacaactctagttgtctagtgtttgatttgtaaaaccgtttcaggtacatgacaaactggaggcaagggacaagacaaaaactcatatttttgtccttca 42365649  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
     |||||||||||| |||||||| | ||||| ||||||||| | ||||||    
T  42365648 tcaaaccacaacacaactttttatatcacggacaagttgtctaaaatac 42365600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 27 - 158
Target Start/End: Original strand, 10399797 - 10399928
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||||| || ||||   |||||||||||||| |||||||||||| |||| ||||||    
T  10399797 cagttgttcagtgtttgatttgtaaaactatttcaggtacaggacaaactagatgcaagatacaggacaaaaactcatatttttgtccttcactaaacca 10399896  T
Q  127 caacataactttttgtctcacgtacaagttgt 158  Q
    ||||| |||||||||||||| ||| |||||||    
T  10399897 caacacaactttttgtctcatgtataagttgt 10399928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 27 - 158
Target Start/End: Original strand, 38623231 - 38623362
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    ||||| |||| |||||||||||||||||||||||||  |||||||||||| |||||||  || | |||||||||||| ||||||||||||||||||||||    
T  38623231 cagttatccaatgtttgatttgtaaaactgtttcagggacaggacaaacttgaggcaatggaaaagacaaaaactgaaatttttgtccctcaccaaacca 38623330  T
Q  127 caacataactttttgtctcacgtacaagttgt 158  Q
    || || ||||||||||| ||| ||||||||||    
T  38623331 cagcacaactttttgtcccacatacaagttgt 38623362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 40692468 - 40692329
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||| |||||| ||||||||| || |||| |||||||||||| |||  |||||||||||||||  |||||||||||||||    
T  40692468 aacaactctagttgtccagtgtttaatttgtgaaactgttttaggtacaagacaaactggagacaagggacaggacaaaaactcgtatttttgtccctca 40692369  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||||||||  | ||||||||||| ||||||||||||||    
T  40692368 ccaaaccacagaacaactttttgtcccacgtacaagttgt 40692329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 27462721 - 27462842
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||||| ||||||||||||||||||||||||||||||||| || |||| ||||||||| || |||  |||| ||||||| ||| |||||||||||||||    
T  27462721 aacaatttcagttgtccagtgtttgatttgtaaaactgttttaggtacatgacaaactgtagacaagggacaagacaaaagctgttatttttgtccctca 27462820  T
Q  119 ccaaaccacaacataacttttt 140  Q
    ||||||||||||| ||||||||    
T  27462821 ccaaaccacaacacaacttttt 27462842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 11115042 - 11114904
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| |||| ||||||| ||||||||||||||| ||||| ||| |||||||||||||||||||||  ||||||||||||| | |||||||||| ||||    
T  11115042 aaacaactccaattgtccaatgtttgatttgtaaa-ctgtt-cagttacaggacaaactggaggcaagggacaggacaaaaaatcatatttttgttcctc 11114945  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||||||||| || ||||||||||| |||| |||||||||    
T  11114944 accaaaccacatcacaactttttgtcccacgcacaagttgt 11114904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 4641676 - 4641539
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||| |||||||||||||||||||||||||||| |||| |||||||||||||     ||| | ||||||| | ||||||||||| |||||||||||||    
T  4641676 agttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggtgg--gacggaacaaaaattcatatttttgtctctcaccaaaccac 4641579  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    | || ||||||||||||||| |||||||||||| ||||||    
T  4641578 agcacaactttttgtctcacatacaagttgtttaaaatac 4641539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 30713032 - 30712888
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| ||||||| ||||||||||||||||||| ||||||||||  |||| |||| ||||||||||  ||||||||| ||||||| |||||||||||||    
T  30713032 aaacaactccagttatccagtgtttgatttgtaatactgtttcagggacagaacaacctggaggcaagggacaggacacaaactgaaatttttgtccctc 30712933  T
Q  118 acca----aaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||    |||||||||| |||||||| || |||||| |||||||    
T  30712932 accaaattaaccacaacacaactttttatcccacgtagaagttgt 30712888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 37 - 142
Target Start/End: Complemental strand, 8112453 - 8112348
Alignment:
Q  37 gtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataact 136  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||||||  ||||  ||||||||| ||||||||||| ||||||||||||||||| ||||    
T  8112453 gtgtttgatttgtaaaattgtttcaggtacagaacaaactggaggcaagagacaatacaaaaactcatatttttgtctctcaccaaaccacaacacaact 8112354  T
Q  137 ttttgt 142  Q
    ||||||    
T  8112353 ttttgt 8112348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 2086225 - 2086095
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||         ||||||||| ||||||||||||||  |||||||||    
T  2086225 agttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggca---------acaaaaactcatatttttgtccctacccaaaccac 2086135  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |  | |||||||||| ||||||||||||||| | ||||||    
T  2086134 agtacaactttttgtttcacgtacaagttgtctgaaatac 2086095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 75 - 158
Target Start/End: Original strand, 12939275 - 12939358
Alignment:
Q  75 ctggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||||||||  |||| ||||||||||||||||||||||| ||||||||||||| || |||||||| |||||||||||||||||    
T  12939275 ctggaggcaagggacatgacaaaaactgatatttttgtccttcaccaaaccacagcacaactttttatctcacgtacaagttgt 12939358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 37863285 - 37863349
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggca 83  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37863285 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggca 37863349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 9717326 - 9717247
Alignment:
Q  88 acaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||||||| || ||||||||||||||||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  9717326 acaggacaaaaactcatgtttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 9717247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 93 - 167
Target Start/End: Original strand, 37003861 - 37003935
Alignment:
Q  93 acaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||| | ||||||    
T  37003861 acaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaaattgtctaaaatac 37003935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 26419026 - 26418946
Alignment:
Q  87 gacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||| |||||||||| |||||||||| ||||||||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  26419026 gacatgacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 26418946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 1247250 - 1247179
Alignment:
Q  87 gacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||||||||||| || |||||||||||||||||||||||||  || ||||||||||| ||||||||||||||    
T  1247250 gacaggacaaaatctcatatttttgtccctcaccaaaccactgcacaactttttgtcccacgtacaagttgt 1247179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 156
Target Start/End: Complemental strand, 13829563 - 13829472
Alignment:
Q  65 acaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagtt 156  Q
    ||||||||||||||||| ||  ||||||||||||||||| |||||||||| |||| | |||||| || ||||||||||| || |||||||||    
T  13829563 acaggacaaactggaggtaagggacaggacaaaaactgaaatttttgtccatcactagaccacatcacaactttttgtcccaggtacaagtt 13829472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 9717372 - 9717317
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaa 74  Q
    ||||| || |||||| |||||||||||||||||||||||||||| |||||||||||    
T  9717372 aacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaa 9717317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 18793228 - 18793300
Alignment:
Q  35 cagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttt 109  Q
    |||||||||||||||||||||||||||| ||||| |||||  ||||||||  |||| |||||||||| |||||||    
T  18793228 cagtgtttgatttgtaaaactgtttcaggtacagtacaaa--ggaggcaagggacatgacaaaaactcatatttt 18793300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 167
Target Start/End: Complemental strand, 26796382 - 26796251
Alignment:
Q  36 agtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataac 135  Q
    ||||||||||||||||||||||| ||   |||  |||||||  ||||||  || |||| ||||| | | |||| |||||||||| ||| ||||||  |||    
T  26796382 agtgtttgatttgtaaaactgttacaaggacaaaacaaacttcaggcaatggataggataaaaattaaaatttgtgtccctcactaaagcacaacgcaac 26796283  T
Q  136 tttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||| |||||||||||||| | ||||||    
T  26796282 tttttgtcacacgtacaagttgtctaaaatac 26796251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 167
Target Start/End: Complemental strand, 41934699 - 41934604
Alignment:
Q  72 aaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||| ||||| |||| |||||||||||| ||| |||| | |||| ||||||||||| |||||||||||  ||||| ||||||| | ||||||    
T  41934699 aaactggatgcaaaagacaagacaaaaactgaaattcttgtacttcactaaaccacaacacaactttttgtcctacgtataagttgtctaaaatac 41934604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 15303180 - 15303282
Alignment:
Q  40 tttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttt 139  Q
    ||||||||||||||||| |||||| |||||||||||| |||||||   ||| |||||||||  | |||||||||| | | ||||| ||| || |||||||    
T  15303180 tttgatttgtaaaactgcttcagagacaggacaaactagaggcaagacacatgacaaaaacataaatttttgtcctttatcaaactacatcacaactttt 15303279  T
Q  140 tgt 142  Q
    |||    
T  15303280 tgt 15303282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 28 - 158
Target Start/End: Complemental strand, 18279063 - 18278934
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||| || |||||||||| ||||| ||||| ||  ||| |||||||||||| |||| ||| | ||||||||| | |||||||| |||||| ||| |||    
T  18279063 agttgtgcaatgtttgatttataaaa-tgttttagggacaagacaaactggagacaaaggacggcacaaaaactaaaatttttgttcctcactaaatcac 18278965  T
Q  128 aacataactttttgtctcacgtacaagttgt 158  Q
      || ||||||||||||||| ||||| ||||    
T  18278964 gtcacaactttttgtctcacatacaaattgt 18278934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 40767256 - 40767207
Alignment:
Q  91 ggacaaaaactgatatttttgtccctcaccaaaccacaacataacttttt 140  Q
    ||||||||||| |  |||||||||||||| ||||||||||||||||||||    
T  40767256 ggacaaaaactaaattttttgtccctcactaaaccacaacataacttttt 40767207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 45463113 - 45463162
Alignment:
Q  103 atatttttgtccctcaccaaaccacaacataactttttgtctcacgtaca 152  Q
    ||||||||||| ||||||||||||||||| |||||||||||  |||||||    
T  45463113 atatttttgtcactcaccaaaccacaacacaactttttgtcatacgtaca 45463162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 36843574 - 36843502
Alignment:
Q  78 gaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgta 150  Q
    |||||||  |||| ||||||||| || |||| |||||||||||||||||||| || || ||||||| ||||||    
T  36843574 gaggcaagagacaagacaaaaaccgaaatttgtgtccctcaccaaaccacaaaatcaccttttgtcccacgta 36843502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 37003810 - 37003858
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagataca 67  Q
    ||||| || ||||||||||||||||||||||||| ||||||||| ||||    
T  37003810 aacaactcaagttgtccagtgtttgatttgtaaatctgtttcaggtaca 37003858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 158
Target Start/End: Original strand, 38786503 - 38786587
Alignment:
Q  72 aaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||||||||||||  |||| || ||||||||| |||||| ||  |||| |||||| |||| ||| |||||||||||||| |||||||    
T  38786503 aaactggaggcaatggacaagataaaaactgaaatttttctc--tcactaaaccaaaacacaacattttgtctcacgtataagttgt 38786587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 45463042 - 45463107
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaa 84  Q
    ||||| ||||||||| ||   ||||||||||||||||| ||||| |||| ||||||| ||||||||    
T  45463042 aacaactccagttgttcaacatttgatttgtaaaactgcttcaggtacaagacaaacaggaggcaa 45463107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 304
Target Start/End: Original strand, 10400027 - 10400083
Alignment:
Q  248 tgttatgtcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    |||| ||||||||||| || | ||||||||| || |||||||||||||||| |||||    
T  10400027 tgttttgtcttgtactattgtgttcagtactcactgttttgcaaaccaaacacaccc 10400083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 18126980 - 18127044
Alignment:
Q  92 gacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagtt 156  Q
    ||||||| ||||  ||||||||  |||  ||||||||||| |||||||||||||| |||||||||    
T  18126980 gacaaaagctgaactttttgtctatcattaaaccacaacacaactttttgtctcaagtacaagtt 18127044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 1e-51; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 43158606 - 43158745
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||||||||||| |    
T  43158606 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctta 43158705  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  43158706 ccaaaccacaacacaactttttgtcccacgtacaagttgt 43158745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 10932477 - 10932625
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  10932477 aacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 10932576  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||| |||||| ||||||||||| |||||||||||||| | ||||||    
T  10932577 ccaaactacaacacaactttttgtcccacgtacaagttgtctaaaatac 10932625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 36769489 - 36769637
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||  ||||||||||||||| ||||||||||||||||    
T  36769489 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctca 36769588  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  36769589 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 36769637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 47953365 - 47953217
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||| |||||||||| ||||||||||||||||    
T  47953365 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctca 47953266  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  47953265 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 47953217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 38301517 - 38301379
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  38301517 aacaactccaattgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctca 38301418  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
     |||||||||||| ||||||||||| |||| |||||||||    
T  38301417 gcaaaccacaacacaactttttgtcccacg-acaagttgt 38301379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 47316627 - 47316757
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  47316627 agttgtccagtgtttgatttgtaaaattgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccac 47316726  T
Q  128 aacataactttttgtctcacgtacaagttgt 158  Q
    |||| ||||||||||||||| | ||||||||    
T  47316727 aacacaactttttgtctcacatgcaagttgt 47316757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 18470857 - 18470711
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||| ||||    
T  18470857 aacaactctagttgtcgagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa--gacaggacaaaaactcatatttttgtctctca 18470760  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| |||||||||||||| |||||||||||||| | ||||||    
T  18470759 ccaaaccacagcataactttttgtcccacgtacaagttgtctaaaatac 18470711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 11321805 - 11321953
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  11321805 aacaactctagttgtccaatgtttgatttgtaaaactgattcaggtacaggacaaactggaggcaacggacaggacaaaaactcatatttttgtccctca 11321904  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  11321905 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 11321953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 18386699 - 18386552
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  |||||||| |||||| ||||||||||||||||    
T  18386699 aacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggac-aaaactcatatttttgtccctca 18386601  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  18386600 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 18386552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 21785046 - 21784898
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||| ||||||||||||||||||||||||||||  ||| ||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  21785046 aacaactctagttgttcagtgtttgatttgtaaaactgtttcaggcacatgacaaactggaggcaagagacaggacaaaaactcatatttttgtccctca 21784947  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| ||||||||||| |||||||||||||| | ||||||    
T  21784946 ccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 21784898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 26994145 - 26994293
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  |||||||||||| || ||||||||||||||||    
T  26994145 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaatctcatatttttgtccctca 26994244  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  26994245 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 26994293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 1870310 - 1870171
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||| |||||||||||||||||||||||||||| |||| || |||||||||||||  ||||||||||||||| ||||||||||||||||    
T  1870310 aacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagataaactggaggcaagggacaggacaaaaactcatatttttgtccctca 1870211  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  1870210 ccaaaccacaacacaactttttgtcccacgtacaagttgt 1870171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 29 - 167
Target Start/End: Complemental strand, 40753320 - 40753182
Alignment:
Q  29 gttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccaca 128  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||| ||||    
T  40753320 gttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaatcaca 40753221  T
Q  129 acataactttttgtctcacgtacaagttgttttaaatac 167  Q
     || ||||||||||| |||||||||||||| | ||||||    
T  40753220 gcacaactttttgtcccacgtacaagttgtctaaaatac 40753182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 25 - 157
Target Start/End: Complemental strand, 329639 - 329507
Alignment:
Q  25 tccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaac 124  Q
    ||||||||||| ||||||||||||||||||||||||||  |||| |||||||||||||||| |||| |||||||||||| ||||||||||||||||||||    
T  329639 tccagttgtcccgtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaaaggacaagacaaaaactgaaatttttgtccctcaccaaac 329540  T
Q  125 cacaacataactttttgtctcacgtacaagttg 157  Q
    |||| || ||||||||||| |||||||||||||    
T  329539 cacatcacaactttttgtcccacgtacaagttg 329507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 26371729 - 26371877
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  26371729 aacaactctagttgtccagtgtttgatttgcaaaactatttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 26371828  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||| |||| || ||||||||||| |||||||||||||| | ||||||    
T  26371829 ccaaatcacagcacaactttttgtcccacgtacaagttgtctaaaatac 26371877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 41211120 - 41211268
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||| ||||||||||||||||||||||||||||| |||| |||||||| |||||||  ||||||||||||||| ||||||||||||||||    
T  41211120 aacaactcaagttgcccagtgtttgatttgtaaaactgtttcaggtacaagacaaactagaggcaagggacaggacaaaaactcatatttttgtccctca 41211219  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  41211220 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 41211268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 32873698 - 32873837
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||| |||||||||||||||| |||||||| ||| ||| |||||||||||||  ||||||||||||||| |||||||||||| ||||||||||||    
T  32873698 agttgtccattgtttgatttgtaaaattgtttcaggtaccggataaactggaggcaagggacaggacaaaaactcatatttttgtccttcaccaaaccac 32873797  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||| |||||||||||||||||||||||||| | ||||||    
T  32873798 aacacaactttttgtctcacgtacaagttgtctgaaatac 32873837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 43368376 - 43368237
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||  ||| |||||||||||||||||||||| |||||    
T  43368376 aacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtataggacaaactggaggcaagagacgggacaaaaactgatatttttgtgcctca 43368277  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
     ||||||||| || |||||||||||  |||||||||||||    
T  43368276 gcaaaccacagcacaactttttgtcctacgtacaagttgt 43368237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 25 - 167
Target Start/End: Original strand, 23349217 - 23349359
Alignment:
Q  25 tccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaac 124  Q
    |||||||||||||||||||| |||||||||| |||||  |||| ||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  23349217 tccagttgtccagtgtttgaattgtaaaactatttcaagtacatgacaaactggaggcaagggacagaacaaaaactgatatttttgtccctcaccaaac 23349316  T
Q  125 cacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||| ||||||||||| ||| |||||||||| | ||||||    
T  23349317 cacaacacaactttttgtcccacatacaagttgtctaaaatac 23349359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 3922623 - 3922760
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||  |||| |||||||||| |||||||||| |||||    
T  3922623 aacaactctagttgtccagtgttttatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactcatatttttgttcctca 3922722  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagtt 156  Q
    |||||||||| || ||||||||||| ||||||||||||    
T  3922723 ccaaaccacagcacaactttttgtcccacgtacaagtt 3922760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 44748871 - 44748722
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| || ||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||  ||||| ||||||||| | |||||||||||||    
T  44748871 aaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactagaggcaagggacagaacaaaaactcaaatttttgtccctc 44748772  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||||| | ||||||||||| |||||||||||||| | ||||||    
T  44748771 accaaaccacaatacaactttttgtcccacgtacaagttgtctaaaatac 44748722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 1363812 - 1363672
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| | ||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||  |||| ||||||| ||||||||||||||||||    
T  1363812 aaacaacttcagttgtccagtgtttgatttgtaaaattgtttcatgtacaggacaaactggaggcaagggacatgacaaaagctgatatttttgtccctc 1363713  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    | ||||||||| || |||||||||||||||||||| |||||    
T  1363712 atcaaaccacatcacaactttttgtctcacgtacaggttgt 1363672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 20127464 - 20127316
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||  |||||||||||| ||||||||||||| |||||    
T  20127464 aacaactccagttgtccagtgtttgatttttaaaactatttcaggtacaggacaaactggaggcaagggacaggacaaaagctgatatttttgttcctca 20127365  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
     ||||||||| || ||||||||||| ||||||||| |||| | ||||||    
T  20127364 gcaaaccacatcacaactttttgtcccacgtacaatttgtgtaaaatac 20127316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 30849166 - 30849314
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||||||| ||||||||| || ||||||||||||||||||| || ||||||||||||||| |||||  ||||||||||||||| ||||||||||||||||    
T  30849166 aacaattctagttgtccaatgattgatttgtaaaactgttttaggtacaggacaaactggtggcaagggacaggacaaaaactcatatttttgtccctca 30849265  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| ||||||||||| ||  |||||||||| | ||||||    
T  30849266 ccaaaccacaacacaactttttgtcccatatacaagttgtataaaatac 30849314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 43189161 - 43189301
Alignment:
Q  18 aaacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctc 117  Q
    |||||| || |||||||||||||||||||| ||||| |||||||| |||||||||||||||||| ||  |||| |||||||||| |||||||||||||||    
T  43189161 aaacaactctagttgtccagtgtttgatttataaaaatgtttcaggtacaggacaaactggaggtaagggacatgacaaaaactcatatttttgtccctc 43189260  T
Q  118 accaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||||||||||||| |||||||| || ||||||||||||||    
T  43189261 accaaaccacaacacaactttttatcccacgtacaagttgt 43189301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 29661498 - 29661361
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||| ||||| ||||| |||| ||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  29661498 aacaactctagttgtccagtgtttgatttgtagaactgattcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 29661399  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagtt 156  Q
    |||||||||| || |||||||| || ||||||||||||    
T  29661398 ccaaaccacagcacaactttttatcccacgtacaagtt 29661361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 11250792 - 11250668
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||  ||||||||||||| | ||||||||||||||||    
T  11250792 aacaactctagttgtccagtgtttcatttgtaaaattgtttcaggtacaggacaaactggaggcaagggacaggacaaaaaatcatatttttgtccctca 11250693  T
Q  119 ccaaaccacaacataactttttgtc 143  Q
    ||||||||||||| |||||||||||    
T  11250692 ccaaaccacaacacaactttttgtc 11250668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 46633867 - 46633724
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||| |||||||||| |||||||| |||||||    
T  46633867 aacaactctagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggagg-----aacaagacaaaaactcatatttttatccctca 46633773  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  46633772 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 46633724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 27 - 158
Target Start/End: Original strand, 26910338 - 26910469
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||||||||||||||||||||||||| |||||||  ||||| ||||||||||||||  ||||||| ||||||||  ||||||||||||| ||||||||    
T  26910338 cagttgtccagtgtttgatttgtaaaacagtttcagggacagggcaaactggaggcaagggacaggataaaaactgcaatttttgtccctcgccaaacca 26910437  T
Q  127 caacataactttttgtctcacgtacaagttgt 158  Q
    ||||| ||||||||||| ||||||||||||||    
T  26910438 caacacaactttttgtcacacgtacaagttgt 26910469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 30 - 153
Target Start/End: Original strand, 30598939 - 30599062
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    ||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||  |||||||||||| || |||||||||||||||| ||||||||||    
T  30598939 ttgtccactgtttcatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaagctcatatttttgtccctcatcaaaccacaa 30599038  T
Q  130 cataactttttgtctcacgtacaa 153  Q
    || |||||||||||||| ||||||    
T  30599039 cacaactttttgtctcaagtacaa 30599062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 16963302 - 16963172
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||| |||||||  || |||||||||||| |||||||||||||| | ||||||||||    
T  16963302 ttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactagaggcaagggataggacaaaaactcatatttttgtcccttatcaaaccacaa 16963203  T
Q  130 cataactttttgtctcacgtacaagttgttt 160  Q
     | ||||||||||| ||||||||||||||||    
T  16963202 tacaactttttgtcccacgtacaagttgttt 16963172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 34295331 - 34295463
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||       |||||||||||||||||||||||||||    
T  34295331 aacaactccagttatccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaa-------gacaaaaactgatatttttgtccctca 34295423  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
     ||||||||| || ||||||||||| ||||||||||||||    
T  34295424 gcaaaccacagcacaactttttgtcccacgtacaagttgt 34295463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 19 - 153
Target Start/End: Complemental strand, 48894892 - 48894758
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||||||| ||||  ||||||||||||||| |||||||||||  |||    
T  48894892 aacaactccagttgtccagtgtttgatttgtaaaattgtttcaggtacagtacaaactggatgcaagggacaggacaaaaactcatatttttgtcattca 48894793  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaa 153  Q
    | |||||||| || ||||||||||| |||||||||    
T  48894792 ctaaaccacatcacaactttttgtcccacgtacaa 48894758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 153
Target Start/End: Complemental strand, 17237251 - 17237117
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||||||||||||||||||||||||||||| | |||||| ||||| |||||||||| ||||   ||| |||||||||| |||||||||||  |||    
T  17237251 aacaactccagttgtccagtgtttgatttgtaaaattatttcaggtacagtacaaactggatgcaaggaacatgacaaaaactcatatttttgtcattca 17237152  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaa 153  Q
    | ||||||||||| |||||||||||||||||||||    
T  17237151 ctaaaccacaacacaactttttgtctcacgtacaa 17237117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 9913699 - 9913552
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||||||||||| ||||||||||||||||||| |||||| ||||||| ||||| |||||||  ||||||||||||| ||||| ||||||| ||||    
T  9913699 aacaactccagttgtccggtgtttgatttgtaaaactatttcaggtacaggataaactagaggcaagggacaggacaaaaattgata-ttttgtcgctca 9913601  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || |||||||| || |||||||| ||||| | ||||||    
T  9913600 ccaaaccacatcacaactttttttcccacgtacaggttgtctaaaatac 9913552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 9927387 - 9927240
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||||||||||| ||||||||||||||||||| |||||| ||||||| ||||| |||||||  ||||||||||||| ||||| ||||||| ||||    
T  9927387 aacaactccagttgtccggtgtttgatttgtaaaactatttcaggtacaggataaactagaggcaagggacaggacaaaaattgata-ttttgtcgctca 9927289  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || |||||||| || |||||||| ||||| | ||||||    
T  9927288 ccaaaccacatcacaactttttttcccacgtacaggttgtctaaaatac 9927240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 22724451 - 22724599
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||||||||||||| ||| |||||||||||||||| |||||||  ||||||||||||||||||||  || | ||||||| |||  ||||||||||||||    
T  22724451 aacaattccagttgttcagcgtttgatttgtaaaacagtttcagggacaggacaaactggaggcaagggatatgacaaaagctgcaatttttgtccctca 22724550  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| |  |||||| |||| |||||||||||||| | ||||||    
T  22724551 ccaaaccacagcgcaactttatgtcccacgtacaagttgtctaaaatac 22724599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 34519675 - 34519535
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    ||||||||||||||| || ||||||||| |||||||  ||| ||||| ||||||||||  ||||||||||||||||  ||||||||||||| ||||||||    
T  34519675 cagttgtccagtgttcgaattgtaaaacagtttcagggacatgacaagctggaggcaagggacaggacaaaaactgcaatttttgtccctcgccaaacca 34519576  T
Q  127 caacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||| ||||||||||| || ||||||||||| | ||||||    
T  34519575 caacacaactttttgtcccaggtacaagttgtctaaaatac 34519535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 27 - 158
Target Start/End: Original strand, 43213853 - 43213984
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgttt-cagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacc 125  Q
    |||||||| |||||||||||||||||||||||| ||| |||||||||||||| ||||||  |||| || |||| ||||||||||||||| ||||||||||    
T  43213853 cagttgtctagtgtttgatttgtaaaactgttttcag-tacaggacaaactgaaggcaagggacaagataaaagctgatatttttgtccttcaccaaacc 43213951  T
Q  126 acaacataactttttgtctcacgtacaagttgt 158  Q
    |||||| ||||||||||| ||| ||||||||||    
T  43213952 acaacacaactttttgtcccacatacaagttgt 43213984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 11822387 - 11822268
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    ||||||||||||||||| |||||||||||| || |||||||||||||||| ||||  |||| |||||||||| |||||||||||| |||| |||||||||    
T  11822387 ttgtccagtgtttgattcgtaaaactgtttgaggtacaggacaaactggatgcaagggacatgacaaaaactcatatttttgtccttcactaaaccacaa 11822288  T
Q  130 cataactttttgtctcacgt 149  Q
    || ||||||||||| |||||    
T  11822287 cacaactttttgtcccacgt 11822268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 22723952 - 22724100
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| |||||||||||||||||||||||||||||| |||||||  || ||||||||| |||| ||  ||||||||||||||||  || ||||||| ||     
T  22723952 aacaactccagttgtccagtgtttgatttgtaaaacagtttcagggaccggacaaactcgaggtaagggacaggacaaaaactgcaatgtttgtccatcg 22724051  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||  |||||||| || |||||||||||||| | ||||||    
T  22724052 ccaaaccacaacgcaactttttatcccacgtacaagttgtataaaatac 22724100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 48445696 - 48445557
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||||||| |||| ||||| |||||||||||||||| ||  |||| |||||||||||||||  |||| |||||||||||| |||||||||| |||    
T  48445696 aacaactccagttatccaatgtttaatttgtaaaactgtttgagggacagaacaaactggaggcaagggacatgacaaaaactgaaatttttgtccttca 48445597  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||| ||||  | ||||||||||||| | ||||||||||    
T  48445596 ccaaatcacaggacaactttttgtctcgcatacaagttgt 48445557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 38 - 167
Target Start/End: Complemental strand, 21133528 - 21133399
Alignment:
Q  38 tgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactt 137  Q
    ||||| ||||||||||||||||||  |||||||||||||| ||||||  |||| |||||||||||||||| || |||||||  |||||||| || |||||    
T  21133528 tgtttaatttgtaaaactgtttcaagtacaggacaaactgaaggcaagggacaagacaaaaactgatattattttccctcaataaaccacatcacaactt 21133429  T
Q  138 tttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| ||||| |||| | ||||||    
T  21133428 tttgtctcacatacaaattgtctaaaatac 21133399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 26700652 - 26700572
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaa 99  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||  || ||||||||||    
T  26700652 aacaattccagttgtccagtgtttgatttgtataactgtttcaggtacatgacaaactggaggcaagagaaaggacaaaaa 26700572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 46448572 - 46448688
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    |||||||| |||||||||||||||||| |||||||| ||| | |||||||||| ||||  |||| || ||||||| |||||||||||| |||| ||||||    
T  46448572 cagttgtctagtgtttgatttgtaaaattgtttcaggtacggtacaaactggatgcaagggacatgataaaaactcatatttttgtccgtcactaaacca 46448671  T
Q  127 caacataactttttgtc 143  Q
    || || |||||||||||    
T  46448672 cagcacaactttttgtc 46448688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 3891994 - 3892085
Alignment:
Q  67 aggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||| ||||||||| |||| || |||||||||||  |||||||||||||    
T  3891994 aggacaaactggaggcaagggacaggacaaaaactcatatttttgtctctcaccaaatcacagcacaactttttgtcctacgtacaagttgt 3892085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 156
Target Start/End: Complemental strand, 37967140 - 37967012
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    |||| ||| |||||||||||||||||||||||||| |||| |||||| |||| ||||  |||| |||||||||  |||||||||||  |||| | |||||    
T  37967140 agttctccggtgtttgatttgtaaaactgtttcaggtacatgacaaattggatgcaagggacaagacaaaaacccatatttttgtctttcactagaccac 37967041  T
Q  128 aacataactttttgtctcacgtacaagtt 156  Q
    | || ||||||||||  ||||||||||||    
T  37967040 atcacaactttttgttccacgtacaagtt 37967012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 167
Target Start/End: Original strand, 41665564 - 41665643
Alignment:
Q  88 acaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||||||||  ||||||||||||| |||||||||| || |||||||||||||||||||||||||| | ||||||    
T  41665564 acaggacaaaaactgcaatttttgtccctcgccaaaccacatcacaactttttgtctcacgtacaagttgtctaaaatac 41665643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 22631840 - 22631765
Alignment:
Q  92 gacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||| | ||||||    
T  22631840 gacaataactgatatttttgtccttcaccaaaccacaacataactttttgttatacgtacaagttgtctaaaatac 22631765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 95 - 158
Target Start/End: Complemental strand, 26652965 - 26652902
Alignment:
Q  95 aaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||||||||||||||||||||||| ||||||||| || ||||||||||| ||||||||||||||    
T  26652965 aaaaactgatatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgt 26652902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 67 - 166
Target Start/End: Complemental strand, 42332186 - 42332087
Alignment:
Q  67 aggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaata 166  Q
    |||| ||| |||||||||||||||||||||||||  | ||| | || | ||||||||||||| || ||||||||||||||| ||||| |||| |||||||    
T  42332186 aggataaattggaggcaaatgacaggacaaaaacataaattctagttcttcaccaaaccacatcacaactttttgtctcacatacaaattgtcttaaata 42332087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 15035219 - 15035296
Alignment:
Q  65 acaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgt 142  Q
    ||||||||||||||| ||||| |||||||| |||| ||| ||| |||| |||||||| ||||||||| ||||||||||    
T  15035219 acaggacaaactggaagcaaaggacaggacgaaaattgaaattcttgttcctcaccagaccacaacacaactttttgt 15035296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 46408995 - 46408925
Alignment:
Q  87 gacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||||||||||| || |||||||||||||||||||||||||| || |||||||||||  || ||||||||||    
T  46408995 gacaggacaaaa-ctcatatttttgtccctcaccaaaccacagcacaactttttgtccgacatacaagttgt 46408925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 48699500 - 48699425
Alignment:
Q  92 gacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||||| ||| ||||||||||| ||||||||||| |||| |||||  |||||||||||||| | ||||||    
T  48699500 gacaaaaactgaaattcttgtccctcactaaaccacaacacaactatttgttccacgtacaagttgtctaaaatac 48699425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 248 - 303
Target Start/End: Complemental strand, 34117404 - 34117349
Alignment:
Q  248 tgttatgtcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcacc 303  Q
    |||| |||||||||||||||| | |||||||||| |||||||||||||||| ||||    
T  34117404 tgttctgtcttgtactgttatgtccagtacttactgttttgcaaaccaaacacacc 34117349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 95 - 158
Target Start/End: Complemental strand, 34117551 - 34117488
Alignment:
Q  95 aaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||||| |||||||||||||||||||||||||| || || |||||||  || |||||||||||    
T  34117551 aaaaactcatatttttgtccctcaccaaaccacatcacaattttttgttccatgtacaagttgt 34117488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 29455777 - 29455906
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    ||||||| || |||||||||||||| ||| ||||||| |||| | ||| |||||||||  ||||  ||||||| ||| ||| |||||| || |  ||| |    
T  29455777 cagttgtgcaatgtttgatttgtaacactatttcagagacagtagaaattggaggcaagggacataacaaaaagtgaaattcttgtccttcgcttaacaa 29455876  T
Q  127 caacataactttttgtctcacgtacaagtt 156  Q
    ||||| ||||||||||| ||| ||| ||||    
T  29455877 caacacaactttttgtcccacatactagtt 29455906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 29372767 - 29372838
Alignment:
Q  87 gacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||| |||||||||| | |||||||||| |||| ||||||||||| |||||| |||  || |||||||||||    
T  29372767 gacacgacaaaaactaaaatttttgtccgtcactaaaccacaacacaactttctgttccatgtacaagttgt 29372838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 35645553 - 35645483
Alignment:
Q  87 gacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    |||| |||||||||||| ||| | ||||||||| ||||||||||| |||||||| ||  |||||||||||||    
T  35645553 gacaagacaaaaactga-attctcgtccctcactaaaccacaacacaactttttatcgtacgtacaagttgt 35645483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 304
Target Start/End: Original strand, 46448797 - 46448848
Alignment:
Q  253 tgtcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    |||||||||||||||| |  |||||||||  |||||||||||||||||||||    
T  46448797 tgtcttgtactgttatgtcaagtacttactattttgcaaaccaaacgcaccc 46448848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 10932728 - 10932777
Alignment:
Q  255 tcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    |||||||||||| | | |||||||||| |||||||||||||||| |||||    
T  10932728 tcttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccc 10932777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 36769740 - 36769789
Alignment:
Q  255 tcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    |||||||||||| | | |||||||||| |||||||||||||||| |||||    
T  36769740 tcttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccc 36769789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 43189414 - 43189463
Alignment:
Q  255 tcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcaccc 304  Q
    |||| ||||||||| | |||||||||| |||||||||||||||| |||||    
T  43189414 tcttatactgttatgtccagtacttactgttttgcaaaccaaacacaccc 43189463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 14608331 - 14608419
Alignment:
Q  36 agtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaac 124  Q
    |||||||||||||||||| ||||||| | ||| |||||| ||||| |||  |||| || ||||| ||| ||| |||||| |||| ||||    
T  14608331 agtgtttgatttgtaaaattgtttcaaagacaagacaaattggagacaatggacaagagaaaaattgaaattcttgtccatcactaaac 14608419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 306
Target Start/End: Complemental strand, 20127193 - 20127161
Alignment:
Q  274 gtacttacagttttgcaaaccaaacgcacccgt 306  Q
    |||||||| ||||||||||||||||||||||||    
T  20127193 gtacttactgttttgcaaaccaaacgcacccgt 20127161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 21408635 - 21408683
Alignment:
Q  108 tttgtccctcaccaaaccacaacataactttttgtctcacgtacaagtt 156  Q
    |||||||||||  |||||||||||||||||||| | ||| |||||||||    
T  21408635 tttgtccctcattaaaccacaacataactttttatttcatgtacaagtt 21408683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 38360138 - 38360098
Alignment:
Q  127 caacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||| |||||||||||| |||||||||||| ||||||    
T  38360138 caacataattttttgtctcacctacaagttgtttaaaatac 38360098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 15332 - 15195
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||| |||||||||| ||||||||||||| |||||||||||||    
T  15332 ttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactcatatttttgtcccccaccaaaccacaa 15233  T
Q  130 cataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || |||||||||||||||||||||||||| | ||||||    
T  15232 cacaactttttgtctcacgtacaagttgtctaaaatac 15195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 100; Significance: 3e-49; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 17988 - 18127
Alignment:
Q  28 agttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccac 127  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  17988 agttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccac 18087  T
Q  128 aacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||| ||||||||||| |||||||||||||| | ||||||    
T  18088 aacacaactttttgtcccacgtacaagttgtctaaaatac 18127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 87 - 167
Target Start/End: Original strand, 12529 - 12609
Alignment:
Q  87 gacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| | ||||||    
T  12529 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 12609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 93; Significance: 5e-45; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 35 - 167
Target Start/End: Original strand, 2279 - 2411
Alignment:
Q  35 cagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataa 134  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||  ||||||||||||||| |||||||||||||||||||||||||| || ||    
T  2279 cagtgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaa 2378  T
Q  135 ctttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||| |||||||||||||| | ||||||    
T  2379 ctttttgtcccacgtacaagttgtctaaaatac 2411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 93; Significance: 5e-45; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 23746 - 23598
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||  |||| |||||||||| |||||||||||| |||    
T  23746 aacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaacttgaggcaagggacatgacaaaaactcatatttttgtccttca 23647  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  23646 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatac 23598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 20077 - 19930
Alignment:
Q  20 acaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcac 119  Q
    |||||| ||||| | ||||||||||| ||||||||||||| ||| | | |||||| || ||  ||  || | |||||||||||| ||| ||||| |||||    
T  20077 acaatttcagttatacagtgtttgatatgtaaaactgttttagagataagacaaattgtagaaaagggatatgacaaaaactgaaattcttgtcactcac 19978  T
Q  120 caaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
     |||||||   | |||||||||| ||||||||||||||||| ||||||    
T  19977 taaaccactgtacaactttttgtttcacgtacaagttgtttgaaatac 19930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 27 - 158
Target Start/End: Original strand, 1576 - 1707
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaacca 126  Q
    ||||| |||||||||||||||||||||||||||||   | ||||||||||||||||||  |||| |||||||||||| ||||||||||||||||||||||    
T  1576 cagttctccagtgtttgatttgtaaaactgtttcaaggataggacaaactggaggcaagggacaagacaaaaactgaaatttttgtccctcaccaaacca 1675  T
Q  127 caacataactttttgtctcacgtacaagttgt 158  Q
    ||||| ||||||||||| ||||||||||||||    
T  1676 caacacaactttttgtcccacgtacaagttgt 1707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 102120 - 101972
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||| |||||||||||||||||||||||||||||  ||||||||||  |||||||||  |||| |||||||||| ||||||||||||||||    
T  102120 aacaactctagttatccagtgtttgatttgtaaaactgtttcatgtacaggacaacttggaggcaacggacatgacaaaaactcatatttttgtccctca 102021  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  102020 ccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatac 101972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 13612 - 13751
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||  |||| |||||||||||||||  || |||||||||||||| ||||||||||||||    
T  13612 aacaactccagttgtccagtgtttgatttgtaaaattgtttcagggacagaacaaactggaggcaagggataggacaaaaactgaaatttttgtccctca 13711  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||||||||  | ||||||||||| ||| ||||||||||    
T  13712 ccaaaccacagtacaactttttgtcccacttacaagttgt 13751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 84; Significance: 1e-39; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 5372 - 5503
Alignment:
Q  27 cagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggac-aaaaactgatatttttgtccctcaccaaacc 125  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  |||||||| ||||||  |||||||||||||||||||||||    
T  5372 cagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaaacacatatttttgtccctcaccaaacc 5471  T
Q  126 acaacataactttttgtctcacgtacaagttg 157  Q
    ||| || ||||||||||| ||| |||||||||    
T  5472 acatcacaactttttgtcccacatacaagttg 5503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 248 - 303
Target Start/End: Original strand, 5608 - 5663
Alignment:
Q  248 tgttatgtcttgtactgttatcttcagtacttacagttttgcaaaccaaacgcacc 303  Q
    |||| |||||||||||||||| | |||||||| | |||||||||||||||||||||    
T  5608 tgttctgtcttgtactgttatgtccagtacttgctgttttgcaaaccaaacgcacc 5663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 19028 - 19163
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||  |||||||||||| || ||||||||||||||||||||| ||||     
T  19028 ttgtccagtgtttgatttgtaaaactgtt-caggtacaggacaaactggaggcaagagacaggacaaaa-ctcatatttttgtccctcaccaaatcacag 19125  T
Q  130 cataactttttgtctcacgtacaagttgttttaaatac 167  Q
    || ||||||||||| |||||||||||||| | ||||||    
T  19126 cacaactttttgtcccacgtacaagttgtctaaaatac 19163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 32 - 153
Target Start/End: Original strand, 42888 - 43009
Alignment:
Q  32 gtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaaca 131  Q
    |||||||||||||||||||||||||||||||  |||| |||||||||||||||  ||||| ||||||||||| |||| ||||||||||||||||||||||    
T  42888 gtccagtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggacagaacaaaaactgaaatttgtgtccctcaccaaaccacaaca 42987  T
Q  132 taactttttgtctcacgtacaa 153  Q
     ||||||||||| |||||||||    
T  42988 caactttttgtcccacgtacaa 43009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 4504 - 4643
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||||||||||||||||||||||| || || || || || ||||| |||||||||  ||||||||||||||| ||||||||||||||||    
T  4504 aacaactctagttgtccagtgtttgatttgtaaaattgatttaggtatagcacaaattggaggcaagggacaggacaaaaactcatatttttgtccctca 4603  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgt 158  Q
    ||||||||||||| ||||||||||| |||||| |||||||    
T  4604 ccaaaccacaacacaactttttgtcccacgtaaaagttgt 4643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 2421 - 2568
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||| || |||||| |||||||||||||||||||||||||||| |||| |||||| |||||| ||  ||||||||||||||| |||| ||||||||| |    
T  2421 aacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaattggaggaaagggacaggacaaaaactcatatctttgtccctaa 2520  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||| ||| | |||||||||||||||||||| | ||||||    
T  2521 ccaaaccacaacacaac-tattgtctcacgtacaagttgtctaaaatac 2568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 51598 - 51471
Alignment:
Q  30 ttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaa 129  Q
    ||||||||||||||||||||||||||||||||| | ||| |||||||||| ||||  |||| |||||||||| |||||||||||||||| |||||||||     
T  51598 ttgtccagtgtttgatttgtaaaactgtttcaggtgcagaacaaactggatgcaagggacaagacaaaaactcatatttttgtccctca-caaaccacag 51500  T
Q  130 cataactttttgtctcacgtacaagttgt 158  Q
    || ||||||||||| ||||||||||||||    
T  51499 cacaactttttgtcccacgtacaagttgt 51471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 19081 - 19209
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  |||| | |||| ||||||||  ||||||||||||||||| ||||||||||||||    
T  19081 aacaattccagttatccagtgtttgatttgtaaaactgtttcagggacagaataaacaggaggcaatggacaggacaaaaactgaaatttttgtccctca 19180  T
Q  119 ccaaaccacaacataactttttgtctcac 147  Q
     |||| | ||||| |||||||||||||||    
T  19181 tcaaagctcaacacaactttttgtctcac 19209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 372889 - 373037
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctca 118  Q
    |||||||  ||||||| | ||||||||||||||||||||||||| ||||| | ||||||||| |||  || | |||||||||| ||||||||||||||||    
T  372889 aacaattttagttgtcaaatgtttgatttgtaaaactgtttcaggtacagaaaaaactggagacaagggatatgacaaaaactcatatttttgtccctca 372988  T
Q  119 ccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||||||| |||| ||||||||||| |||||||||||||| | ||||||    
T  372989 ccaaaccataacacaactttttgtcccacgtacaagttgtctaaaatac 373037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 76; Significance: 6e-35; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 15298 - 15454
Alignment:
Q  19 aacaattccagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaa--------atgacaggacaaaaactgatattttt 110  Q
    ||||| || |||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||        || ||| |||||||||| ||||||||    
T  15298 aacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaagggacaagatcacatgacaaaaactcatattttt 15397  T
Q  111 gtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||| | ||||||    
T  15398 gtccctcaccaaaccacaacacaactttttgtcccatgtacaagttgtctaaaatac 15454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 158
Target Start/End: Original strand, 13534 - 13643
Alignment:
Q  49 taaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacg 148  Q
    ||||||| ||||||| | | |||||| |||||||||  |||| |||||||| ||| |||| |||| ||||| |||  || ||| ||||||||||| || |    
T  13534 taaaactatttcagagagaagacaaattggaggcaatagacatgacaaaaattgaaatttgtgtctctcactaaaatacgacacaactttttgtcacatg 13633  T
Q  149 tacaagttgt 158  Q
    ||||||||||    
T  13634 tacaagttgt 13643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 167
Target Start/End: Original strand, 33538 - 33617
Alignment:
Q  87 gacaggacaaaaactgatatttttgtccctcaccaaaccacaacataactttttgtctcacgtacaagttgttttaaatac 167  Q
    |||| |||||||| ||| ||| |||||||||| |||||||||||| ||||||||||| ||||||||| |||| | ||||||    
T  33538 gacatgacaaaaa-tgaaattcttgtccctcatcaaaccacaacacaactttttgtcccacgtacaaattgtataaaatac 33617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 167
Target Start/End: Original strand, 7408 - 7534
Alignment:
Q  44 atttgtaaaactgtttcagatacaggacaaactggaggcaaatgacaggacaaaaactgatatttttgtccctcaccaaaccacaacataa---cttttt 140  Q
    |||||||||||| ||| ||| | | || |||| | |||||| ||||  |||||||||||| ||| ||||| ||||| ||| ||||||| ||    |||||    
T  7408 atttgtaaaactcttttagagatatgagaaaccgaaggcaagtgactagacaaaaactgaaattcttgtctctcactaaatcacaacacaagattttttt 7507  T
Q  141 gtctcacgtacaagttgttttaaatac 167  Q
    ||||||||||| |||||| | ||||||    
T  7508 gtctcacgtacgagttgtctaaaatac 7534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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