View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7476_low_2 (Length: 315)
Name: NF7476_low_2
Description: NF7476
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7476_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 18 - 284
Target Start/End: Original strand, 45440991 - 45441257
Alignment:
| Q |
18 |
aatagttgatgcactttgtccatttttccctcccaattcattggcagtcccttaatgtgttgtacctgaaccccaattgaattgtaaaaatgtgagtgtg |
117 |
Q |
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| T |
45440991 |
aatagttgatgcactttgtccatttttccctcccaattcattggcagtcccttaatgtgttgtacctgaaccccaattgaattgtaaaaatgtgagtgtg |
45441090 |
T |
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| Q |
118 |
atcatcaatcatattattgaaaatgaatctaactgacatacctggttggtgttcttgaaagacatagattggtggtttggtatataagctttgatggttc |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
45441091 |
atcatcaatcatattattgaaaatgaatctaactgacatacctggttggtgttcttgaaagacatagattgatggtttggtatataagctttgatggttc |
45441190 |
T |
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| Q |
218 |
tgtgagttccagtacatgttgctattgtaggtacatacctggaaataaagagaaatgaaatgatata |
284 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45441191 |
tgtgagttccagtacatgttgctattgtaggtacatacctggaaataaagagaaatgaaatgatata |
45441257 |
T |
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