View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7477_low_11 (Length: 321)

Name: NF7477_low_11
Description: NF7477
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7477_low_11
NF7477_low_11
[»] chr4 (54 HSPs)
chr4 (20-194)||(30864645-30864816)
chr4 (272-321)||(6776532-6776581)
chr4 (272-321)||(14296551-14296600)
chr4 (272-321)||(14314799-14314848)
chr4 (272-321)||(33552925-33552974)
chr4 (272-321)||(49152182-49152231)
chr4 (275-321)||(23521837-23521883)
chr4 (275-321)||(29616127-29616173)
chr4 (272-321)||(2725215-2725264)
chr4 (272-321)||(20802614-20802663)
chr4 (272-321)||(23327871-23327920)
chr4 (272-321)||(24002292-24002341)
chr4 (276-321)||(42869931-42869976)
chr4 (272-321)||(43641053-43641102)
chr4 (272-321)||(46680593-46680642)
chr4 (276-321)||(55593843-55593888)
chr4 (274-321)||(50727996-50728043)
chr4 (274-321)||(50736010-50736057)
chr4 (275-321)||(9512423-9512469)
chr4 (272-314)||(20518112-20518154)
chr4 (275-321)||(21202697-21202743)
chr4 (275-321)||(29785620-29785666)
chr4 (272-321)||(36885885-36885935)
chr4 (275-321)||(53343560-53343606)
chr4 (275-321)||(54542947-54542993)
chr4 (275-321)||(56154578-56154624)
chr4 (272-321)||(21579980-21580029)
chr4 (272-321)||(38486340-38486389)
chr4 (272-321)||(55065416-55065464)
chr4 (273-321)||(33177115-33177163)
chr4 (275-321)||(4325748-4325794)
chr4 (275-321)||(12600843-12600889)
chr4 (275-321)||(24210275-24210321)
chr4 (275-321)||(36743771-36743817)
chr4 (275-320)||(37865710-37865755)
chr4 (282-321)||(7555040-7555079)
chr4 (282-321)||(37695624-37695663)
chr4 (282-321)||(44324425-44324464)
chr4 (272-321)||(52319280-52319326)
chr4 (275-321)||(34929872-34929918)
chr4 (279-321)||(42772719-42772761)
chr4 (275-317)||(47361496-47361538)
chr4 (284-321)||(11056008-11056045)
chr4 (272-321)||(38812474-38812523)
chr4 (272-321)||(50178576-50178624)
chr4 (278-321)||(1231271-1231314)
chr4 (275-314)||(20694328-20694367)
chr4 (282-321)||(47642574-47642613)
chr4 (279-321)||(2786925-2786967)
chr4 (275-321)||(29592853-29592898)
chr4 (272-321)||(7001809-7001857)
chr4 (272-321)||(9807111-9807159)
chr4 (284-321)||(36497183-36497220)
chr4 (273-321)||(50186484-50186531)
[»] scaffold0729 (1 HSPs)
scaffold0729 (272-321)||(4675-4724)
[»] scaffold0014 (1 HSPs)
scaffold0014 (272-321)||(101900-101949)
[»] chr8 (32 HSPs)
chr8 (272-321)||(25478194-25478243)
chr8 (273-321)||(3251761-3251809)
chr8 (273-321)||(5968969-5969017)
chr8 (275-321)||(29563331-29563377)
chr8 (275-321)||(31513688-31513734)
chr8 (275-321)||(32020106-32020152)
chr8 (275-321)||(45446409-45446455)
chr8 (276-321)||(6386531-6386576)
chr8 (272-321)||(29672428-29672477)
chr8 (272-321)||(32303690-32303739)
chr8 (272-321)||(34101459-34101508)
chr8 (272-321)||(41709728-41709777)
chr8 (275-321)||(13407040-13407086)
chr8 (275-321)||(27103913-27103959)
chr8 (275-321)||(31732018-31732064)
chr8 (275-321)||(34063082-34063128)
chr8 (275-321)||(37664388-37664434)
chr8 (272-321)||(8673160-8673209)
chr8 (272-321)||(30543127-30543176)
chr8 (273-321)||(14005149-14005197)
chr8 (272-321)||(4052433-4052480)
chr8 (272-321)||(17805641-17805690)
chr8 (273-321)||(7394919-7394967)
chr8 (283-321)||(12753430-12753468)
chr8 (272-321)||(7591552-7591600)
chr8 (272-321)||(41548570-41548618)
chr8 (273-321)||(30501098-30501145)
chr8 (282-321)||(22999218-22999257)
chr8 (275-305)||(37861835-37861865)
chr8 (283-321)||(40389002-40389040)
chr8 (272-321)||(10467016-10467064)
chr8 (284-321)||(37618497-37618534)
[»] chr7 (37 HSPs)
chr7 (272-321)||(26994316-26994365)
chr7 (272-321)||(40753110-40753159)
chr7 (272-321)||(43158777-43158826)
chr7 (273-321)||(10932648-10932696)
chr7 (273-321)||(41211292-41211340)
chr7 (275-321)||(11321976-11322022)
chr7 (275-321)||(32873860-32873906)
chr7 (275-321)||(36769660-36769706)
chr7 (275-321)||(46633655-46633701)
chr7 (275-321)||(47316789-47316835)
chr7 (275-321)||(47947718-47947764)
chr7 (275-321)||(47953148-47953194)
chr7 (272-321)||(3922794-3922843)
chr7 (272-321)||(30849337-30849386)
chr7 (275-321)||(3892117-3892163)
chr7 (275-321)||(18386483-18386529)
chr7 (275-321)||(18470642-18470688)
chr7 (275-321)||(26371900-26371946)
chr7 (275-321)||(29661281-29661327)
chr7 (272-321)||(11250577-11250626)
chr7 (276-321)||(44748654-44748699)
chr7 (272-320)||(47442792-47442840)
chr7 (278-321)||(1870095-1870138)
chr7 (275-321)||(16963065-16963112)
chr7 (275-321)||(43189334-43189380)
chr7 (276-321)||(21784830-21784875)
chr7 (280-321)||(46408852-46408893)
chr7 (275-315)||(12982261-12982301)
chr7 (276-321)||(21133330-21133376)
chr7 (275-321)||(30599099-30599145)
chr7 (275-321)||(46627128-46627174)
chr7 (273-321)||(26652823-26652870)
chr7 (282-321)||(1363602-1363641)
chr7 (282-321)||(34117417-34117456)
chr7 (279-321)||(17237038-17237080)
chr7 (279-321)||(46448735-46448777)
chr7 (279-321)||(48894679-48894721)
[»] chr6 (25 HSPs)
chr6 (272-321)||(11613920-11613969)
chr6 (272-321)||(17867786-17867835)
chr6 (272-321)||(17877569-17877618)
chr6 (272-321)||(34176781-34176830)
chr6 (275-321)||(3259637-3259683)
chr6 (272-321)||(3932936-3932985)
chr6 (272-321)||(24203314-24203363)
chr6 (272-321)||(24242615-24242664)
chr6 (272-321)||(32132509-32132558)
chr6 (275-321)||(2614850-2614896)
chr6 (276-321)||(10324240-10324285)
chr6 (272-321)||(29814816-29814865)
chr6 (275-321)||(167052-167098)
chr6 (275-321)||(32409981-32410027)
chr6 (272-321)||(11212208-11212257)
chr6 (276-321)||(15277409-15277454)
chr6 (283-321)||(15277066-15277104)
chr6 (272-321)||(28502410-28502460)
chr6 (281-321)||(23636183-23636223)
chr6 (272-307)||(4494241-4494276)
chr6 (282-317)||(31870233-31870268)
chr6 (283-321)||(11279090-11279128)
chr6 (284-321)||(10485120-10485157)
chr6 (272-321)||(14808129-14808177)
chr6 (284-321)||(34684113-34684150)
[»] chr5 (32 HSPs)
chr5 (272-321)||(5571738-5571787)
chr5 (272-321)||(29241329-29241378)
chr5 (275-321)||(4818236-4818282)
chr5 (275-321)||(6284395-6284441)
chr5 (275-321)||(40182418-40182464)
chr5 (272-321)||(31770687-31770736)
chr5 (272-321)||(35701228-35701277)
chr5 (274-321)||(7208326-7208373)
chr5 (272-318)||(24181723-24181769)
chr5 (275-321)||(32528669-32528715)
chr5 (275-321)||(39788146-39788192)
chr5 (275-321)||(40489291-40489337)
chr5 (272-321)||(2351631-2351680)
chr5 (272-321)||(21739257-21739306)
chr5 (276-321)||(22493514-22493559)
chr5 (273-321)||(5673096-5673144)
chr5 (272-321)||(7523122-7523172)
chr5 (275-321)||(11963295-11963341)
chr5 (275-321)||(23091400-23091446)
chr5 (275-321)||(41790558-41790604)
chr5 (272-321)||(553347-553396)
chr5 (272-321)||(8136790-8136839)
chr5 (272-321)||(28090616-28090665)
chr5 (272-321)||(41459540-41459589)
chr5 (282-321)||(8561077-8561116)
chr5 (275-321)||(700697-700743)
chr5 (272-321)||(7770375-7770423)
chr5 (272-321)||(39918458-39918507)
chr5 (273-321)||(3735310-3735357)
chr5 (273-321)||(7725905-7725952)
chr5 (275-319)||(31880174-31880218)
chr5 (278-317)||(34794844-34794883)
[»] chr3 (34 HSPs)
chr3 (272-321)||(4851540-4851589)
chr3 (272-321)||(28675742-28675791)
chr3 (272-321)||(44116891-44116940)
chr3 (275-321)||(2135025-2135071)
chr3 (275-321)||(12349255-12349301)
chr3 (275-321)||(53557879-53557925)
chr3 (272-321)||(3864758-3864807)
chr3 (272-321)||(25860505-25860554)
chr3 (272-321)||(34026619-34026668)
chr3 (276-321)||(53046725-53046770)
chr3 (275-321)||(1344791-1344837)
chr3 (275-321)||(5442246-5442292)
chr3 (275-321)||(20255000-20255046)
chr3 (275-321)||(21221444-21221490)
chr3 (275-321)||(25927411-25927457)
chr3 (275-321)||(26282471-26282517)
chr3 (275-321)||(38213309-38213355)
chr3 (272-321)||(3695376-3695425)
chr3 (272-321)||(20609732-20609781)
chr3 (272-321)||(42636487-42636536)
chr3 (276-321)||(47958516-47958561)
chr3 (278-321)||(43175527-43175570)
chr3 (275-321)||(24571236-24571282)
chr3 (275-321)||(40094458-40094504)
chr3 (275-321)||(51259864-51259910)
chr3 (279-321)||(54622880-54622922)
chr3 (276-321)||(29584831-29584876)
chr3 (282-321)||(51925292-51925331)
chr3 (283-321)||(51296544-51296582)
chr3 (272-321)||(31883106-31883154)
chr3 (272-321)||(33364862-33364910)
chr3 (281-321)||(39052922-39052962)
chr3 (282-321)||(10747179-10747218)
chr3 (282-321)||(41694985-41695024)
[»] chr2 (37 HSPs)
chr2 (272-321)||(5278924-5278973)
chr2 (272-321)||(32497866-32497915)
chr2 (274-321)||(2645176-2645223)
chr2 (275-321)||(44284583-44284629)
chr2 (272-321)||(9733020-9733069)
chr2 (272-321)||(16104225-16104274)
chr2 (272-321)||(18685787-18685836)
chr2 (272-321)||(33366561-33366610)
chr2 (272-321)||(34338761-34338810)
chr2 (272-321)||(35114736-35114785)
chr2 (272-321)||(40692256-40692305)
chr2 (275-321)||(2086026-2086072)
chr2 (275-321)||(7258850-7258896)
chr2 (275-321)||(17540668-17540714)
chr2 (275-321)||(39461268-39461314)
chr2 (272-321)||(42706309-42706359)
chr2 (272-321)||(4641467-4641516)
chr2 (272-321)||(30326421-30326470)
chr2 (273-321)||(37003958-37004006)
chr2 (274-321)||(19513779-19513826)
chr2 (278-321)||(42365534-42365577)
chr2 (279-321)||(7761663-7761705)
chr2 (275-321)||(8112252-8112298)
chr2 (275-321)||(18793351-18793397)
chr2 (272-321)||(32766595-32766643)
chr2 (276-321)||(33889198-33889243)
chr2 (275-321)||(30798579-30798625)
chr2 (281-321)||(26981779-26981819)
chr2 (282-321)||(1247116-1247155)
chr2 (282-321)||(3913550-3913589)
chr2 (282-321)||(9717185-9717224)
chr2 (282-317)||(10399964-10399999)
chr2 (275-306)||(37308610-37308641)
chr2 (291-321)||(12672564-12672594)
chr2 (283-321)||(26418885-26418923)
chr2 (282-319)||(11114833-11114870)
chr2 (273-321)||(30712810-30712857)
[»] chr1 (37 HSPs)
chr1 (272-321)||(844889-844938)
chr1 (272-321)||(7183878-7183927)
chr1 (272-321)||(16386814-16386863)
chr1 (272-321)||(16451087-16451136)
chr1 (272-321)||(51264455-51264504)
chr1 (275-321)||(6711211-6711257)
chr1 (275-321)||(35387476-35387522)
chr1 (275-321)||(44738206-44738252)
chr1 (272-321)||(12890198-12890247)
chr1 (272-321)||(26118380-26118429)
chr1 (272-321)||(42510485-42510534)
chr1 (273-321)||(32270314-32270362)
chr1 (274-321)||(30105845-30105892)
chr1 (275-321)||(17887910-17887956)
chr1 (272-318)||(24339805-24339851)
chr1 (275-321)||(28340468-28340514)
chr1 (275-321)||(41972875-41972921)
chr1 (275-321)||(45491040-45491086)
chr1 (275-321)||(51703327-51703373)
chr1 (272-321)||(16437323-16437371)
chr1 (273-321)||(17327814-17327862)
chr1 (275-321)||(1601136-1601182)
chr1 (275-321)||(20495056-20495102)
chr1 (275-321)||(34663890-34663936)
chr1 (276-321)||(42705403-42705448)
chr1 (272-321)||(50540304-50540353)
chr1 (275-321)||(1351600-1351645)
chr1 (275-321)||(41968014-41968060)
chr1 (275-321)||(46154863-46154909)
chr1 (272-321)||(25539816-25539864)
chr1 (272-321)||(31004093-31004141)
chr1 (272-321)||(38663093-38663141)
chr1 (272-321)||(50304612-50304660)
chr1 (279-321)||(10384334-10384376)
chr1 (291-321)||(49303518-49303548)
chr1 (281-321)||(3415018-3415059)
chr1 (272-321)||(42512935-42512983)
[»] scaffold0054 (1 HSPs)
scaffold0054 (274-321)||(23530-23577)
[»] scaffold0181 (1 HSPs)
scaffold0181 (277-321)||(19186-19230)
[»] scaffold0004 (1 HSPs)
scaffold0004 (278-321)||(373060-373103)
[»] scaffold0169 (2 HSPs)
scaffold0169 (275-321)||(12632-12678)
scaffold0169 (275-321)||(18150-18196)
[»] scaffold0098 (1 HSPs)
scaffold0098 (275-321)||(51393-51439)
[»] scaffold0360 (1 HSPs)
scaffold0360 (272-321)||(15473-15522)
[»] scaffold0208 (1 HSPs)
scaffold0208 (275-321)||(2434-2480)
[»] scaffold0957 (1 HSPs)
scaffold0957 (275-321)||(2591-2637)
[»] scaffold0025 (1 HSPs)
scaffold0025 (272-321)||(5536-5584)
[»] scaffold0027 (1 HSPs)
scaffold0027 (284-321)||(15135-15172)


Alignment Details
Target: chr4 (Bit Score: 161; Significance: 7e-86; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 20 - 194
Target Start/End: Original strand, 30864645 - 30864816
Alignment:
Q  20 ggatatctgaagttacatattcaattgatatgcctgttacttagaactatgatgaacttacttctattatagtggtttttctaaaactgttctaaaattt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30864645 ggatatctgaagttacatattcaattgatatgcctgttacttagaactatgatgaacttacttctattatagtggtttttctaaaactgttctaaaattt 30864744  T
Q  120 tgaagataataaacgtaaagagtgagaggtgatgaaatctatctattttagctaatttatttcttggccatttag 194  Q
    |||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30864745 tgaag---ataaacgtaaagagtgagaggtgatgaaatctatctattttagctaatttatttcttggccatttag 30864816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 6776532 - 6776581
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6776532 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 6776581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 14296551 - 14296600
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14296551 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 14296600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 14314799 - 14314848
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14314799 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 14314848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 33552974 - 33552925
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33552974 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 33552925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 49152231 - 49152182
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49152231 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 49152182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 23521837 - 23521883
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  23521837 gacaaattttttatggcattgagtaattttttgttttatacgatttt 23521883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 29616127 - 29616173
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  29616127 gacaaattttttatggcattgagtaattttttgttttatacgatttt 29616173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 2725264 - 2725215
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2725264 caggacaaattttttatgacattgagtaattttttgttttatacgatttt 2725215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 20802663 - 20802614
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20802663 caggacaaattttttatggcattgagtaattttttgttttatatgatttt 20802614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 23327871 - 23327920
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23327871 caggacaaattttttatggcaatgagtaattttttgttttatacgatttt 23327920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 24002292 - 24002341
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24002292 caggacaaattttttttggcattgagtaattttttgttttatacgatttt 24002341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 42869931 - 42869976
Alignment:
Q  276 acaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  42869931 acaaattttttatggcattgagtaattttttgttttatacgatttt 42869976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 43641053 - 43641102
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43641053 caggacaaaatttttatggcattgagtaattttttgttttatacgatttt 43641102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 46680642 - 46680593
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  46680642 caggacaaattttttatggcattgagtaattttttgttttatatgatttt 46680593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 55593843 - 55593888
Alignment:
Q  276 acaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  55593843 acaaattttttatggcattgagtaattttttgttttatacgatttt 55593888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 50728043 - 50727996
Alignment:
Q  274 ggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50728043 ggacaaattttttatggcattgaataattttttgttttatacgatttt 50727996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 50736057 - 50736010
Alignment:
Q  274 ggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50736057 ggacaaattttttatggcattgaataattttttgttttatacgatttt 50736010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 9512469 - 9512423
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  9512469 gacaaattttttatggcattgagtaattttttgttttatatgatttt 9512423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 314
Target Start/End: Complemental strand, 20518154 - 20518112
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttata 314  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  20518154 caggacaaattttttatggcattgagtaattttttgttttata 20518112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 21202697 - 21202743
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  21202697 gacaaattttttatggcaatgagtaattttttgttttatacgatttt 21202743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 29785666 - 29785620
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  29785666 gacaaattttttatggcattgaataattttttgttttatacgatttt 29785620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 36885885 - 36885935
Alignment:
Q  272 caggacaaattttttatggcattgag-taattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36885885 caggacaaattttttatggcattgagttaattttttgttttatacgatttt 36885935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 53343606 - 53343560
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  53343606 gacaaattttttatggcattgaataattttttgttttatacgatttt 53343560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 54542947 - 54542993
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  54542947 gacaaattttttatgtcattgagtaattttttgttttatacgatttt 54542993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 56154578 - 56154624
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  56154578 gacaaattttttatggcattgagtaattttttgttttatatgatttt 56154624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 21579980 - 21580029
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  21579980 caggacaaattttttatggtattgagtaatttttagttttatacgatttt 21580029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 38486389 - 38486340
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  38486389 caggacaaattttttatggcgttgagtaattttttgttttatactatttt 38486340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 55065464 - 55065416
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  55065464 caggacaaattttt-atggcattgagtaattttttgttttatacgatttt 55065416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 33177163 - 33177115
Alignment:
Q  273 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  33177163 aggacaaatattttatggcattgagtaattttatgttttatacgatttt 33177115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 4325748 - 4325794
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||    
T  4325748 gacaaattttttatggcaatgagtaattttttgttttatgcgatttt 4325794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 12600843 - 12600889
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||    
T  12600843 gacaaattttttatggcattgagtagttttttgttttaaacgatttt 12600889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 24210275 - 24210321
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  24210275 gacaaatattttatggtattgagtaattttttgttttatacgatttt 24210321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 36743817 - 36743771
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  36743817 gacaaattttttatggcattgagtaatttgttgttttatacaatttt 36743771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 37865710 - 37865755
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgattt 320  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||    
T  37865710 gacaatttttttatggcattgaataattttttgttttatacgattt 37865755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 321
Target Start/End: Complemental strand, 7555079 - 7555040
Alignment:
Q  282 tttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  7555079 tttttatggcattgaataattttttgttttatacgatttt 7555040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 321
Target Start/End: Complemental strand, 37695663 - 37695624
Alignment:
Q  282 tttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  37695663 tttttatggcattgaataattttttgttttatacgatttt 37695624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 321
Target Start/End: Complemental strand, 44324464 - 44324425
Alignment:
Q  282 tttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  44324464 tttttatggcattgaataattttttgttttatacgatttt 44324425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 52319280 - 52319326
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||    
T  52319280 caggacaaattttttatggcattgagtaa---tttgttttatacgatttt 52319326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 34929872 - 34929918
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  34929872 gacaaaatttttatggcattcagtaaatttttgttttatacgatttt 34929918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 321
Target Start/End: Original strand, 42772719 - 42772761
Alignment:
Q  279 aattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  42772719 aattatttatggcattgagtaattttttgttttatatgatttt 42772761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 317
Target Start/End: Complemental strand, 47361538 - 47361496
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacga 317  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  47361538 gacaaattttttatgatattgagtaattttttgttttatacga 47361496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 11056008 - 11056045
Alignment:
Q  284 tttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  11056008 tttatggcattgaataattttttgttttatacgatttt 11056045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 38812474 - 38812523
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||| || ||||||||| || ||||||||||||||||||||||||||||    
T  38812474 caggataatttttttatgacaatgagtaattttttgttttatacgatttt 38812523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 50178624 - 50178576
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  50178624 caggacaaattttt-atgacattgaataattttttgttttatacgatttt 50178576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 1231271 - 1231314
Alignment:
Q  278 aaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||  ||||| |||||||||||||||||||    
T  1231271 aaattttttatggcattatgtaatattttgttttatacgatttt 1231314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 275 - 314
Target Start/End: Original strand, 20694328 - 20694367
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttata 314  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  20694328 gacaaattttgtatggcaatgagtaattttttgttttata 20694367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 282 - 321
Target Start/End: Complemental strand, 47642613 - 47642574
Alignment:
Q  282 tttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  47642613 tttttatgacattgaataattttttgttttatacgatttt 47642574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 321
Target Start/End: Original strand, 2786925 - 2786967
Alignment:
Q  279 aattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||    
T  2786925 aattttttattgcattgaataattttttgttttataagatttt 2786967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 29592853 - 29592898
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  29592853 gacaaatttttt-tggcattgaataattttttgttttatatgatttt 29592898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 7001809 - 7001857
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||| ||||||||||| |||||||| || ||||||||||||    
T  7001809 caggacaaatttt-tatggcattgaataatttttggtcttatacgatttt 7001857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 9807111 - 9807159
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||| | |||||||||| ||||||| ||||||||||||||||    
T  9807111 caggacaaatttgt-atggcattgaataattttatgttttatacgatttt 9807159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 36497183 - 36497220
Alignment:
Q  284 tttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  36497183 tttatagcattgagtaattttttattttatacgatttt 36497220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 50186484 - 50186531
Alignment:
Q  273 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||| ||| |||||| ||||||||| ||||||||||||||    
T  50186484 aggacaaattttt-atgacattgaataattttttattttatacgatttt 50186531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 4724 - 4675
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4724 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 4675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 101900 - 101949
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  101900 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 101949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 25478194 - 25478243
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25478194 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 25478243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 3251809 - 3251761
Alignment:
Q  273 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3251809 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 3251761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 5969017 - 5968969
Alignment:
Q  273 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5969017 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 5968969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 29563377 - 29563331
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  29563377 gacaaattttttatggcattgagtaattttttgttttatacgatttt 29563331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 31513734 - 31513688
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  31513734 gacaaattttttatggcattgagtaattttttgttttatacgatttt 31513688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 32020152 - 32020106
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  32020152 gacaaattttttatggcattgagtaattttttgttttatacgatttt 32020106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 45446409 - 45446455
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  45446409 gacaaattttttatggcattgagtaattttttgttttatacgatttt 45446455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 6386531 - 6386576
Alignment:
Q  276 acaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6386531 acaaattttttatggcattgagtaattttttgttttatacgatttt 6386576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 29672477 - 29672428
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29672477 caggacaaatttttcatggcattgagtaattttttgttttatacgatttt 29672428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 32303739 - 32303690
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32303739 caggacaaattttttatggcattgagtaattttttgttttatatgatttt 32303690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 34101459 - 34101508
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34101459 caggacaaattttttatggcgttgagtaattttttgttttatacgatttt 34101508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 41709728 - 41709777
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41709728 caggacaatttttttatggcattgagtaattttttgttttatacgatttt 41709777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 13407086 - 13407040
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  13407086 gacaaattttttatagcattgagtaattttttgttttatacgatttt 13407040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 27103913 - 27103959
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  27103913 gacaaattttttatggcattgagtaattttttgttttatatgatttt 27103959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 31732018 - 31732064
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  31732018 gacaaaatttttatggcattgagtaattttttgttttatacgatttt 31732064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 34063082 - 34063128
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  34063082 gacaaattttttatggcattgaataattttttgttttatacgatttt 34063128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 37664434 - 37664388
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  37664434 gacaaattttttatggcattgagtaattttttgttttatatgatttt 37664388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 8673209 - 8673160
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  8673209 caggacaaaatttttatggcattgagtaattttttgttttatatgatttt 8673160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 30543176 - 30543127
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  30543176 caggacaaatattttatggcattgagtaattttatgttttatacgatttt 30543127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 14005197 - 14005149
Alignment:
Q  273 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  14005197 aggacaaattttttatgacattgagtaattttttgttttatacaatttt 14005149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 4052433 - 4052480
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  4052433 caggacaaattttttatggcattgagtaa--ttttgttttatacgatttt 4052480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 17805641 - 17805690
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  17805641 caggacaaattttttagggcaacgagtaattttttgttttatacgatttt 17805690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 7394967 - 7394919
Alignment:
Q  273 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||| |||||||||||| |||||||||||||||||||| |||||||    
T  7394967 aggacaagttttttatggcactgagtaattttttgttttatgcgatttt 7394919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 321
Target Start/End: Complemental strand, 12753468 - 12753430
Alignment:
Q  283 ttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  12753468 ttttatggcattgagtaatttgttgttttatacgatttt 12753430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 7591600 - 7591552
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  7591600 caggacaaattttt-atgacattgaataattttttgttttatacgatttt 7591552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 41548570 - 41548618
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  41548570 caggacaaattttt-atgacattgaataattttttgttttatacgatttt 41548618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 30501098 - 30501145
Alignment:
Q  273 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  30501098 aggacaaattttt-atgacattgaataattttttgttttatacgatttt 30501145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 22999218 - 22999257
Alignment:
Q  282 tttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  22999218 tttttatgacattgaataattttttgttttatacgatttt 22999257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 305
Target Start/End: Original strand, 37861835 - 37861865
Alignment:
Q  275 gacaaattttttatggcattgagtaattttt 305  Q
    |||||||||||||||||||||||||||||||    
T  37861835 gacaaattttttatggcattgagtaattttt 37861865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 321
Target Start/End: Original strand, 40389002 - 40389040
Alignment:
Q  283 ttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  40389002 ttttatggcattgaataattttttattttatacgatttt 40389040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 10467016 - 10467064
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| ||| ||| || ||||||||||||||||||||||||    
T  10467016 caggacaaattttt-atgacatagaataattttttgttttatacgatttt 10467064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 37618534 - 37618497
Alignment:
Q  284 tttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  37618534 tttatggcattgaataattttttgttttatacaatttt 37618497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 26994365 - 26994316
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26994365 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 26994316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 40753110 - 40753159
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40753110 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 40753159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 43158826 - 43158777
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43158826 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 43158777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 10932696 - 10932648
Alignment:
Q  273 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10932696 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 10932648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 41211340 - 41211292
Alignment:
Q  273 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41211340 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 41211292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 11322022 - 11321976
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  11322022 gacaaattttttatggcattgagtaattttttgttttatacgatttt 11321976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 32873906 - 32873860
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  32873906 gacaaattttttatggcattgagtaattttttgttttatacgatttt 32873860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 36769706 - 36769660
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  36769706 gacaaattttttatggcattgagtaattttttgttttatacgatttt 36769660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 46633655 - 46633701
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  46633655 gacaaattttttatggcattgagtaattttttgttttatacgatttt 46633701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 47316835 - 47316789
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  47316835 gacaaattttttatggcattgagtaattttttgttttatacgatttt 47316789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 47947718 - 47947764
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  47947718 gacaaattttttatggcattgagtaattttttgttttatacgatttt 47947764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 47953148 - 47953194
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  47953148 gacaaattttttatggcattgagtaattttttgttttatacgatttt 47953194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 3922843 - 3922794
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3922843 caggacaaattttttatggcattgagtatttttttgttttatacgatttt 3922794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 30849386 - 30849337
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30849386 caggacaatttttttatggcattgagtaattttttgttttatacgatttt 30849337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 3892163 - 3892117
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  3892163 gacaaattttttatggcattgagtaattttttgttttacacgatttt 3892117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 18386483 - 18386529
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  18386483 gacaaattttttatgacattgagtaattttttgttttatacgatttt 18386529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 18470642 - 18470688
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  18470642 gacaaattttttatggcattgagtaattttttgttttatatgatttt 18470688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 26371946 - 26371900
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  26371946 gacaaattttttatggcattgaataattttttgttttatacgatttt 26371900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 29661281 - 29661327
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  29661281 gacaaattttttatagcattgagtaattttttgttttatacgatttt 29661327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 11250577 - 11250626
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  11250577 caggacaaattttttatggtattgagtaattttttgttttatatgatttt 11250626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 44748654 - 44748699
Alignment:
Q  276 acaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  44748654 acaaattttttatggcaatgagtaattttttgttttatacgatttt 44748699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 47442792 - 47442840
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgattt 320  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  47442792 caggacaaattttttatgacattgagtaattttttgttttatacaattt 47442840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 1870095 - 1870138
Alignment:
Q  278 aaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  1870095 aaattttttatgacattgagtaattttttgttttatacgatttt 1870138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 16963065 - 16963112
Alignment:
Q  275 gacaaattttttatggcattgagtaa-ttttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  16963065 gacaaattttttatggcattgagtaatttttttgttttatacgatttt 16963112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 43189380 - 43189334
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  43189380 gacaaattttttatggcattgagtaatttgttgtttcatacgatttt 43189334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 21784830 - 21784875
Alignment:
Q  276 acaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||    
T  21784830 acaaatcttttatggcattgagtaattttatgttttatacgatttt 21784875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 321
Target Start/End: Original strand, 46408852 - 46408893
Alignment:
Q  280 attttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  46408852 attttttatggcattgagtaattttttattttatacgatttt 46408893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 12982261 - 12982301
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatac 315  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  12982261 gacaaaatttttatggcattgagtaattttttgttttatac 12982301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 21133330 - 21133376
Alignment:
Q  276 acaaattttttatggcattgagtaa-ttttttgttttatacgatttt 321  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||    
T  21133330 acaaattttttatgacattgagtaatttttttgttttatacgatttt 21133376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 30599145 - 30599099
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||    
T  30599145 gacaaattttttatgaaattgagtaatttgttgttttatacgatttt 30599099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 46627128 - 46627174
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||| |||||||||||||||| |||||||||||||||||| |||||    
T  46627128 gacaatttttttatggcattgaataattttttgttttatacaatttt 46627174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 26652823 - 26652870
Alignment:
Q  273 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  26652823 aggacaaattttt-atgacattgaataattttttgttttatacgatttt 26652870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 1363602 - 1363641
Alignment:
Q  282 tttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  1363602 tttttatggcattgaataattttttgttttatacaatttt 1363641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 34117417 - 34117456
Alignment:
Q  282 tttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  34117417 tttttatggcattgaataatttttcgttttatacgatttt 34117456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 321
Target Start/End: Original strand, 17237038 - 17237080
Alignment:
Q  279 aattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||    
T  17237038 aattttttattgcattgaataattttttgttttataagatttt 17237080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 321
Target Start/End: Complemental strand, 46448777 - 46448735
Alignment:
Q  279 aattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||    
T  46448777 aattttttattgcattgaataattttttgttttataagatttt 46448735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 321
Target Start/End: Original strand, 48894679 - 48894721
Alignment:
Q  279 aattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||    
T  48894679 aattttttattgcattgaataattttttgttttataagatttt 48894721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 11613969 - 11613920
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11613969 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 11613920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 17867786 - 17867835
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17867786 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 17867835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 17877569 - 17877618
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17877569 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 17877618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 34176781 - 34176830
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34176781 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 34176830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 3259637 - 3259683
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  3259637 gacaaattttttatggcattgagtaattttttgttttatacgatttt 3259683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 3932985 - 3932936
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3932985 caggacaaattttttatggcattgaataattttttgttttatacgatttt 3932936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 24203314 - 24203363
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24203314 caggacaaattttttatggcattgagtaattttttgttttatacaatttt 24203363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 24242615 - 24242664
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24242615 caggacaaattttttatgacattgagtaattttttgttttatacgatttt 24242664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 32132558 - 32132509
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32132558 caggacaaattttttatggcattgagtaatttgttgttttatacgatttt 32132509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 2614850 - 2614896
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  2614850 gacaaattttttatggcattgagtaattttttattttatacgatttt 2614896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 10324285 - 10324240
Alignment:
Q  276 acaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  10324285 acaaattttttatgggattgagtaattttttgttttatacgatttt 10324240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 29814816 - 29814865
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  29814816 caggacaatttttttatggcattgagtaatgttttgttttatacgatttt 29814865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 167098 - 167052
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  167098 gacaaattttttatgacattgagtaattttttgttttatatgatttt 167052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 32410027 - 32409981
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  32410027 gacaaattttttatgacattgaataattttttgttttatacgatttt 32409981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 11212208 - 11212257
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||||    
T  11212208 caggacaaatgttttatggccttgagtaattttttgttttattcgatttt 11212257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 15277454 - 15277409
Alignment:
Q  276 acaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||    
T  15277454 acaaattttttatagcattgagtaatttgttgttttatacgatttt 15277409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 321
Target Start/End: Complemental strand, 15277104 - 15277066
Alignment:
Q  283 ttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  15277104 ttttatggcattgagtaattttttgttttataagatttt 15277066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 28502410 - 28502460
Alignment:
Q  272 caggacaaattttttat-ggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||| |||||||| ||||||||||||| |||||||||||||||||||    
T  28502410 caggacaatttttttattggcattgagtaatgttttgttttatacgatttt 28502460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 23636183 - 23636223
Alignment:
Q  281 ttttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  23636183 ttttttatggcattgaataattttttgttttatacaatttt 23636223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 307
Target Start/End: Complemental strand, 4494276 - 4494241
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttg 307  Q
    ||||||||||||||||||||| ||||||||||||||    
T  4494276 caggacaaattttttatggcaatgagtaattttttg 4494241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 282 - 317
Target Start/End: Complemental strand, 31870268 - 31870233
Alignment:
Q  282 tttttatggcattgagtaattttttgttttatacga 317  Q
    ||||||||||||||| ||||||||||||||||||||    
T  31870268 tttttatggcattgaataattttttgttttatacga 31870233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 321
Target Start/End: Original strand, 11279090 - 11279128
Alignment:
Q  283 ttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  11279090 ttttatggccttgagtaattttttgttttattcgatttt 11279128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 10485120 - 10485157
Alignment:
Q  284 tttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  10485120 tttatgacattgaataattttttgttttatacgatttt 10485157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 14808177 - 14808129
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| |||| ||||| |||||||| |||||||||||||||    
T  14808177 caggacaaattttt-atggaattgaataatttttagttttatacgatttt 14808129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 34684150 - 34684113
Alignment:
Q  284 tttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||| || ||||||||||||||||||||||||||||    
T  34684150 tttatgacaatgagtaattttttgttttatacgatttt 34684113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 5571787 - 5571738
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5571787 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 5571738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 29241329 - 29241378
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29241329 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 29241378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 4818282 - 4818236
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  4818282 gacaaattttttatggcattgagtaattttttgttttatacgatttt 4818236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 6284441 - 6284395
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  6284441 gacaaattttttatggcattgagtaattttttgttttatacgatttt 6284395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 40182418 - 40182464
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  40182418 gacaaattttttatggcattgagtaattttttgttttatacgatttt 40182464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 31770736 - 31770687
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31770736 caggacaaattttttatggcattgagtaattttttgttttatatgatttt 31770687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 35701228 - 35701277
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35701228 caggacaaattttttatggcaatgagtaattttttgttttatacgatttt 35701277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 7208373 - 7208326
Alignment:
Q  274 ggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  7208373 ggacaaatattttatggcattgagtaattttttgttttatacgatttt 7208326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 318
Target Start/End: Complemental strand, 24181769 - 24181723
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgat 318  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  24181769 caggacaaattttttatggcattgagtaatttgttgttttatacgat 24181723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 32528669 - 32528715
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  32528669 gacaaattttttatggcattgaataattttttgttttatacgatttt 32528715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 39788146 - 39788192
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  39788146 gacaaattttttatggtattgagtaattttttgttttatacgatttt 39788192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 40489291 - 40489337
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  40489291 gacaaattttttatggcattgagtaattttttgttttatacaatttt 40489337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 2351631 - 2351680
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  2351631 caggataaattttttatggcattgagtaattttttgttttgtacgatttt 2351680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 21739306 - 21739257
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  21739306 caggacaaattttttatggcattgtgtaattttttgttttatacaatttt 21739257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 22493559 - 22493514
Alignment:
Q  276 acaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  22493559 acaaattttttatggcaatgagtaattttttgttttatacgatttt 22493514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 5673096 - 5673144
Alignment:
Q  273 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  5673096 aggacaaatattttatggcaatgagtaattttttgttttatacgatttt 5673144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 7523122 - 7523172
Alignment:
Q  272 caggacaaattttttatggcattgagtaa-ttttttgttttatacgatttt 321  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  7523122 caggacaaattttttatgacattgagtaatttttttgttttatacgatttt 7523172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 11963295 - 11963341
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||    
T  11963295 gacaaattttttatggcattgagtaattttgtattttatacgatttt 11963341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 23091446 - 23091400
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  23091446 gacaaatttcttatggcattgagtaatgttttgttttatacgatttt 23091400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 41790604 - 41790558
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||    
T  41790604 gacaaatattttatggcattgagtaattttatgttttatacgatttt 41790558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 553347 - 553396
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  553347 caggacaaatattttatggcattgaataattttatgttttatacgatttt 553396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 8136790 - 8136839
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||| ||||||||||||||||||||| ||||||||||||| |||||    
T  8136790 caggacaatttttttatggcattgagtaatgttttgttttatactatttt 8136839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 28090665 - 28090616
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||    
T  28090665 caggacaaattttttatattattgagtaattttttgttttatacgatttt 28090616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 41459540 - 41459589
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  41459540 caggacaaaaatttaatggcattgagtaattttttgttttatacgatttt 41459589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 321
Target Start/End: Complemental strand, 8561116 - 8561077
Alignment:
Q  282 tttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  8561116 tttttatggcattgattaattttttgttttatacgatttt 8561077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 700743 - 700697
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||| ||||||||||| ||||||||||||||||||||| ||||||    
T  700743 gacaaaatttttatggcaatgagtaattttttgttttatatgatttt 700697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 7770423 - 7770375
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  7770423 caggacaaattttt-atgacattgaataattttttgttttatacgatttt 7770375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 39918458 - 39918507
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||| |||||| | ||||||||||||| ||||||||||||||||    
T  39918458 caggacaaatattttatagtattgagtaattttatgttttatacgatttt 39918507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 3735310 - 3735357
Alignment:
Q  273 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  3735310 aggacaaattttt-atgacattgaataattttttgttttatacgatttt 3735357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 7725952 - 7725905
Alignment:
Q  273 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||    
T  7725952 aggacaaattttt-atggaattgaataattttttgttttatacgatttt 7725905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 31880218 - 31880174
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatt 319  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||    
T  31880218 gacaaattttttatgacattgaataattttttgtattatacgatt 31880174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 317
Target Start/End: Original strand, 34794844 - 34794883
Alignment:
Q  278 aaattttttatggcattgagtaattttttgttttatacga 317  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  34794844 aaattttttgtggcattgaataattttttgttttatacga 34794883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 4851589 - 4851540
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4851589 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 4851540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 28675742 - 28675791
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28675742 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 28675791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 44116891 - 44116940
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44116891 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 44116940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 2135025 - 2135071
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  2135025 gacaaattttttatggcattgagtaattttttgttttatacgatttt 2135071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 12349301 - 12349255
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  12349301 gacaaattttttatggcattgagtaattttttgttttatacgatttt 12349255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 53557925 - 53557879
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  53557925 gacaaattttttatggcattgagtaattttttgttttatacgatttt 53557879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 3864807 - 3864758
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3864807 caggacaaattttttatggcattgagtaattttttgttttatatgatttt 3864758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 25860554 - 25860505
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25860554 caggacaaattttttatggcaatgagtaattttttgttttatacgatttt 25860505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 34026619 - 34026668
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34026619 caggacaaattttttatggtattgagtaattttttgttttatacgatttt 34026668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 53046770 - 53046725
Alignment:
Q  276 acaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  53046770 acaaattttttatggcattgagtaattttttgttttatacgatttt 53046725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 1344837 - 1344791
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  1344837 gacaatttttttatggcattgagtaattttttgttttatacgatttt 1344791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 5442246 - 5442292
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  5442246 gacaaattttttatggcattgaataattttttgttttatacgatttt 5442292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 20255000 - 20255046
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  20255000 gacaaattttttatggcattgagtaattttttgttttataagatttt 20255046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 21221490 - 21221444
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  21221490 gacaaattttttatggcattgagtaattttttgttttatacaatttt 21221444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 25927457 - 25927411
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  25927457 gacaaattttttatggcattgagtgattttttgttttatacgatttt 25927411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 26282517 - 26282471
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  26282517 gacaaattttttatggcattgaataattttttgttttatacgatttt 26282471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 38213309 - 38213355
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  38213309 gacaaattttttatggcaatgagtaattttttgttttatacgatttt 38213355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 3695425 - 3695376
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  3695425 caggacaaattttttatggcattgagtaatttgttgttttatacaatttt 3695376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 20609781 - 20609732
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  20609781 caggacaaattttttatgacattgagtaattttttgttatatacgatttt 20609732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 42636536 - 42636487
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  42636536 caggacaaattttttatggcattaagtaattttttgttttaaacgatttt 42636487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 47958561 - 47958516
Alignment:
Q  276 acaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  47958561 acaaattttttatgtcattgagtaattttttgttttatacgatttt 47958516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 43175527 - 43175570
Alignment:
Q  278 aaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  43175527 aaattttttatggtattgagtaattttttgttttatacgatttt 43175570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 24571236 - 24571282
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||    
T  24571236 gacaaattttttatggcattgagtaatttgttgttttattcgatttt 24571282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 40094458 - 40094504
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||    
T  40094458 gacaaaatttttatggcattgagtaattttttgttttatgcgatttt 40094504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 51259910 - 51259864
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  51259910 gacaaaatttttatggcattgagtaattttttgttttatatgatttt 51259864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 321
Target Start/End: Complemental strand, 54622922 - 54622880
Alignment:
Q  279 aattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  54622922 aattttttatggcattgaataattttttgttttatacgatttt 54622880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 29584831 - 29584876
Alignment:
Q  276 acaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  29584831 acaaattttttattgcattgagtaattttttattttatacgatttt 29584876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 321
Target Start/End: Complemental strand, 51925331 - 51925292
Alignment:
Q  282 tttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  51925331 tttttatggcattgaataattttttgttttatacgatttt 51925292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 321
Target Start/End: Original strand, 51296544 - 51296582
Alignment:
Q  283 ttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  51296544 ttttatggtattgagtaattttttgttttatacgatttt 51296582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 31883154 - 31883106
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  31883154 caggacaaattttt-atgacattgaataattttttgttttatacgatttt 31883106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 33364910 - 33364862
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  33364910 caggacaaattttt-atgacattgaataattttttgttttatacgatttt 33364862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 39052962 - 39052922
Alignment:
Q  281 ttttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||| |||||||||||||| |||||||||||||||||    
T  39052962 ttttttatagcattgagtaatttgttgttttatacgatttt 39052922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 10747179 - 10747218
Alignment:
Q  282 tttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  10747179 tttttatgacattgaataattttttgttttatacgatttt 10747218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 282 - 321
Target Start/End: Complemental strand, 41695024 - 41694985
Alignment:
Q  282 tttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  41695024 tttttatgacattgaataattttttgttttatacgatttt 41694985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 5278973 - 5278924
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5278973 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 5278924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 32497866 - 32497915
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32497866 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 32497915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 2645223 - 2645176
Alignment:
Q  274 ggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2645223 ggacaaattttttatggcattgagtaattttttgttttatacgatttt 2645176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 44284583 - 44284629
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  44284583 gacaaattttttatggcattgagtaattttttgttttatacgatttt 44284629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 9733069 - 9733020
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9733069 caggacaaattttttatggcattgaataattttttgttttatacgatttt 9733020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 16104225 - 16104274
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16104225 cagggcaaattttttatggcattgagtaattttttgttttatacgatttt 16104274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 18685787 - 18685836
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18685787 caggacaaattttttatggcattgagtaattttttgttttataggatttt 18685836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 33366561 - 33366610
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33366561 caggacaaattttttatggcattgaataattttttgttttatacgatttt 33366610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 34338761 - 34338810
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34338761 caggacaaaatttttatggcattgagtaattttttgttttatacgatttt 34338810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 35114736 - 35114785
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35114736 caggacaaattttttatggcaatgagtaattttttgttttatacgatttt 35114785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 40692256 - 40692305
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40692256 caggacaaattttttatggcattgaataattttttgttttatacgatttt 40692305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 2086026 - 2086072
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  2086026 gacaaattttttatgccattgagtaattttttgttttatacgatttt 2086072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 7258850 - 7258896
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  7258850 gacaaattttttatggcattgagtaattttttgttttatacaatttt 7258896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 17540668 - 17540714
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  17540668 gacatattttttatggcattgagtaattttttgttttatacgatttt 17540714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 39461268 - 39461314
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  39461268 gacaaattttttatggcattgagtaattttttattttatacgatttt 39461314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 42706309 - 42706359
Alignment:
Q  272 caggacaaattttttatggcattgagtaa-ttttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42706309 caggacaaattttttatggcattgagtaatttttttgttttatacgatttt 42706359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 4641467 - 4641516
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  4641467 caggacaaattttttataccattgagtaattttttgttttatacgatttt 4641516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 30326470 - 30326421
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  30326470 caggacaaaatttttatggaattgagtaattttttgttttatacgatttt 30326421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 37004006 - 37003958
Alignment:
Q  273 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  37004006 aggacaaattttttatggcattgaataattttttattttatacgatttt 37003958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 19513826 - 19513779
Alignment:
Q  274 ggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  19513826 ggacaaattttttatggtattgagtaattttttgttttatatgatttt 19513779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 42365534 - 42365577
Alignment:
Q  278 aaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  42365534 aaattttttatggcattgagtaattttttgttttatatgatttt 42365577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 321
Target Start/End: Complemental strand, 7761705 - 7761663
Alignment:
Q  279 aattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  7761705 aattttttatgacattgagtaattttttgttttatacgatttt 7761663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 8112252 - 8112298
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||    
T  8112252 gacaaattttgtatgacattgagtaattttttgttttatacgatttt 8112298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 18793397 - 18793351
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||    
T  18793397 gacaaattttttatgggattgagtaattttttgttttatacaatttt 18793351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 32766643 - 32766595
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  32766643 caggacaaattttt-atggcattgaataattttttgttttatacgatttt 32766595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 33889198 - 33889243
Alignment:
Q  276 acaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||    
T  33889198 acaaattttttatggtattgagtaattttttgttttatatgatttt 33889243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 30798625 - 30798579
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  30798625 gacaaattttgtatggtatttagtaattttttgttttatacgatttt 30798579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 26981819 - 26981779
Alignment:
Q  281 ttttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  26981819 ttttttatgacaatgagtaattttttgttttatacgatttt 26981779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 1247116 - 1247155
Alignment:
Q  282 tttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  1247116 tttttatggcattgaataattttttattttatacgatttt 1247155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 282 - 321
Target Start/End: Complemental strand, 3913589 - 3913550
Alignment:
Q  282 tttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  3913589 tttttatggcattgaataatattttgttttatacgatttt 3913550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 9717185 - 9717224
Alignment:
Q  282 tttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| |||||||||||||| ||||||||||    
T  9717185 tttttatggcattgggtaattttttgtttgatacgatttt 9717224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 282 - 317
Target Start/End: Complemental strand, 10399999 - 10399964
Alignment:
Q  282 tttttatggcattgagtaattttttgttttatacga 317  Q
    ||||||||||||||| ||||||||||||||||||||    
T  10399999 tttttatggcattgaataattttttgttttatacga 10399964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 275 - 306
Target Start/End: Original strand, 37308610 - 37308641
Alignment:
Q  275 gacaaattttttatggcattgagtaatttttt 306  Q
    ||||||||||||||||||||||||||||||||    
T  37308610 gacaaattttttatggcattgagtaatttttt 37308641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 321
Target Start/End: Complemental strand, 12672594 - 12672564
Alignment:
Q  291 cattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||    
T  12672594 cattgagtaattttttgttttatacgatttt 12672564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 321
Target Start/End: Original strand, 26418885 - 26418923
Alignment:
Q  283 ttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||| |||||||||||||||||||||| |||||    
T  26418885 ttttatggcaatgagtaattttttgttttatacaatttt 26418923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 319
Target Start/End: Original strand, 11114833 - 11114870
Alignment:
Q  282 tttttatggcattgagtaattttttgttttatacgatt 319  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  11114833 tttttatggcattgaataatttttcgttttatacgatt 11114870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 30712810 - 30712857
Alignment:
Q  273 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||| |||| ||||| ||||||||||||||||| ||||||    
T  30712810 aggacaaattttt-atggtattgaataattttttgttttatatgatttt 30712857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 844938 - 844889
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  844938 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 844889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 7183878 - 7183927
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7183878 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 7183927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 16386814 - 16386863
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16386814 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 16386863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 16451087 - 16451136
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16451087 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 16451136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 51264455 - 51264504
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51264455 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 51264504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 6711257 - 6711211
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  6711257 gacaaattttttatggcattgagtaattttttgttttatacgatttt 6711211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 35387522 - 35387476
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  35387522 gacaaattttttatggcattgagtaattttttgttttatacgatttt 35387476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 44738252 - 44738206
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  44738252 gacaaattttttatggcattgagtaattttttgttttatacgatttt 44738206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 12890198 - 12890247
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12890198 caggataaattttttatggcattgagtaattttttgttttatacgatttt 12890247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 26118429 - 26118380
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26118429 caggacaaattttttatggcattgaataattttttgttttatacgatttt 26118380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 42510485 - 42510534
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42510485 caggacaaattttttatggcattgaataattttttgttttatacgatttt 42510534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 32270314 - 32270362
Alignment:
Q  273 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32270314 aggacaaattttttatggcattgagtaattttttgttttatatgatttt 32270362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 30105892 - 30105845
Alignment:
Q  274 ggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30105892 ggacaaattttttatggcattaagtaattttttgttttatacgatttt 30105845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 17887910 - 17887956
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  17887910 gacaaattttttatggcattgagtaatttgttgttttatacgatttt 17887956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 318
Target Start/End: Complemental strand, 24339851 - 24339805
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgat 318  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  24339851 caggacaaattttttatggcattgaataattttttgttttatacgat 24339805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 28340514 - 28340468
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  28340514 gacaatttttttatggcattgagtaattttttgttttatacgatttt 28340468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 41972875 - 41972921
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  41972875 gacaaattttttatggcattaagtaattttttgttttatacgatttt 41972921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 45491086 - 45491040
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  45491086 gacaaattttgtatggcattgagtaattttttgttttatacgatttt 45491040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 51703373 - 51703327
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  51703373 gacaaattttttatggcattgagtaattttttgttttataccatttt 51703327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 16437323 - 16437371
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16437323 caggacaaatttt-tatggcattgagtaattttttgttttatacgatttt 16437371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 17327862 - 17327814
Alignment:
Q  273 aggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  17327862 aggacaaattttttatggcgttgagtaatttgttgttttatacgatttt 17327814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 1601136 - 1601182
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||    
T  1601136 gacaaattttttatggcaatgagtaattttttgttttgtacgatttt 1601182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 20495102 - 20495056
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  20495102 gacaaattttttatgacattgagtaattttttgttttatactatttt 20495056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 34663890 - 34663936
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  34663890 gacaaattttttatggcattaagtaattttttgttttatatgatttt 34663936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 42705448 - 42705403
Alignment:
Q  276 acaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||    
T  42705448 acaaattttttatggcaatgagtaattttttgttttatatgatttt 42705403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 50540304 - 50540353
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||| ||||||||||||||||||||||||||| |||||||||| ||||||    
T  50540304 cagggcaaattttttatggcattgagtaatttgttgttttatatgatttt 50540353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 1351645 - 1351600
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  1351645 gacaaattttttatggcattgagt-attttttgttttatatgatttt 1351600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 41968060 - 41968014
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| || |||||||||||||||||||||| |||||    
T  41968060 gacaaattttttatgacaatgagtaattttttgttttatacaatttt 41968014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 46154863 - 46154909
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| |||||| ||||||||||||||||| ||||||    
T  46154863 gacaaattttttatgacattgaataattttttgttttataagatttt 46154909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 25539816 - 25539864
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| ||||| |||| ||||||||||||||||||||||||    
T  25539816 caggacaaattttt-atggctttgaataattttttgttttatacgatttt 25539864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 31004093 - 31004141
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  31004093 caggacaaatttt-tatggcattgaataattttttgttttataggatttt 31004141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 38663093 - 38663141
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  38663093 caggacaaattttt-atgacattgaataattttttgttttatacgatttt 38663141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 50304612 - 50304660
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  50304612 caggacaaattttt-atgacattgaataattttttgttttatacgatttt 50304660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 321
Target Start/End: Original strand, 10384334 - 10384376
Alignment:
Q  279 aattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||    
T  10384334 aattttttattgcattgaataattttttgttttataagatttt 10384376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 321
Target Start/End: Complemental strand, 49303548 - 49303518
Alignment:
Q  291 cattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||    
T  49303548 cattgagtaattttttgttttatacgatttt 49303518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 3415059 - 3415018
Alignment:
Q  281 ttttttatggcattgagtaatt-ttttgttttatacgatttt 321  Q
    |||||||||||||||||||||| |||||||||||| ||||||    
T  3415059 ttttttatggcattgagtaatttttttgttttatatgatttt 3415018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 42512983 - 42512935
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| ||  |||||| ||||||||||||||||||||||||    
T  42512983 caggacaaattttt-atcacattgaataattttttgttttatacgatttt 42512935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 274 - 321
Target Start/End: Original strand, 23530 - 23577
Alignment:
Q  274 ggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23530 ggacaaattttttatggcattgagtaattttttgttttatacgatttt 23577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 19230 - 19186
Alignment:
Q  277 caaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19230 caaattttttatggcattgagtaattttttgttttatacgatttt 19186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 373103 - 373060
Alignment:
Q  278 aaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  373103 aaattttttatggcattgagtaattttttgttttatacgatttt 373060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 12678 - 12632
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  12678 gacaaattttttatagcattgagtaattttttgttttatacgatttt 12632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 18196 - 18150
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  18196 gacaaattttttatagcattgagtaattttttgttttatacgatttt 18150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 51393 - 51439
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  51393 gacaaattttttatgacattgagtaattttttgttttatacgatttt 51439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 15522 - 15473
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  15522 caggataaattttttatgacattgagtaattttttgttttatacgatttt 15473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 2480 - 2434
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  2480 gacaaattttttatgacattgagtaattttttgttttataggatttt 2434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 2637 - 2591
Alignment:
Q  275 gacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||  |||| |||||||||||||||||||||||||    
T  2637 gacaaattttttatgagattgggtaattttttgttttatacgatttt 2591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 5584 - 5536
Alignment:
Q  272 caggacaaattttttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  5584 caggacaaattttt-atgacattgaataattttttgttttatacgatttt 5536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 15135 - 15172
Alignment:
Q  284 tttatggcattgagtaattttttgttttatacgatttt 321  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  15135 tttatggcattgagtaatttgttgttttataagatttt 15172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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