View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7477_low_9 (Length: 344)
Name: NF7477_low_9
Description: NF7477
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7477_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 18251221 - 18251342
Alignment:
| Q |
197 |
caagaagaccaaatccttccaccaagttgacgtaaatataggcaacacctccgtgttgatgtcaacactaccactcatcctcagacaatatttctcgata |
296 |
Q |
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| T |
18251221 |
caagaagacaaaatccttccaccaagttgacgtaaatataggcaacacttccgtgttgatgtcaacactaccaatcatcctcgaacaatatttctcgata |
18251320 |
T |
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| Q |
297 |
aggatcaattttaggtctctaa |
318 |
Q |
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|||||||||||||||||||||| |
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| T |
18251321 |
aggatcaattttaggtctctaa |
18251342 |
T |
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