View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7481_low_14 (Length: 346)
Name: NF7481_low_14
Description: NF7481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7481_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 13 - 337
Target Start/End: Complemental strand, 3187066 - 3186742
Alignment:
| Q |
13 |
aatatattttaaaaaattatgagaatcacttaagcacaagatgtgcttaaagtggattcaataaagtcacaagtcacatgtctataaagttaaggtgtac |
112 |
Q |
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| T |
3187066 |
aatatatattaaaaaattatgagaaccactcaagcataagatgtgcttcatgtggattcaacgaagtcacaagtcacatgtctataaagttaaggtgtac |
3186967 |
T |
|
| Q |
113 |
ctcaagttgactcaataaagtcatatctcaaagcaaggctaagttgttagccttactttgactctagtttgttttcggttgacaacttaaaatattttta |
212 |
Q |
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||||||||||||||||||| ||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
3186966 |
ctcaagttgactcaataaaatcacatctcaaagtaagactaagttgttagccttactttgactctagtttgttttcggttgacaacttaaaatgttttta |
3186867 |
T |
|
| Q |
213 |
aataacacaatctctaaaatatcgttataaatatctatattgttaatccatttagattggtttattgatgttggattctgaccttgacgtatgattctct |
312 |
Q |
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||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
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| T |
3186866 |
aataacacaatctttaaaatattgttataaatatctatattattaatccatttagattggcttattgatgttagattctgaccttgaagtatgattctct |
3186767 |
T |
|
| Q |
313 |
tgaggtttcgattctctttgatgtc |
337 |
Q |
| |
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|||| |||||||| ||||||||||| |
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| T |
3186766 |
tgagatttcgattatctttgatgtc |
3186742 |
T |
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