View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7482_low_3 (Length: 357)
Name: NF7482_low_3
Description: NF7482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7482_low_3 |
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Alignment Details
Target: chr4 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 18 - 189
Target Start/End: Complemental strand, 54946654 - 54946483
Alignment:
| Q |
18 |
acaaccatttgtataatccctttcttcctcaaatcaaactctatttcatttcacccttgaaagatactaacacttttgcttattgaatttagaaaacgaa |
117 |
Q |
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| T |
54946654 |
acaaccatttgtataatccctttcttcctcaaatcaaactctatttcatttcacccttgaaagatactaacacttttgcttattgaatttagaaaaagaa |
54946555 |
T |
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| Q |
118 |
atacatacaaatttgatactgcacaaatactcacatcttccctataaatatataaatgtattaaattctctc |
189 |
Q |
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| T |
54946554 |
atacacacaaatttgatactgcacaaatactcacatcttccctataaatatataaatgtattaaattctctc |
54946483 |
T |
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