View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7483_high_14 (Length: 275)

Name: NF7483_high_14
Description: NF7483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7483_high_14
NF7483_high_14
[»] chr7 (52 HSPs)
chr7 (144-258)||(33601380-33601494)
chr7 (146-258)||(33601997-33602109)
chr7 (1-80)||(33601563-33601642)
chr7 (146-248)||(17944323-17944426)
chr7 (148-251)||(27863702-27863806)
chr7 (157-252)||(39967918-39968014)
chr7 (168-251)||(11619135-11619218)
chr7 (144-250)||(30570909-30571016)
chr7 (146-251)||(48470031-48470137)
chr7 (168-251)||(21568472-21568555)
chr7 (172-251)||(38499890-38499969)
chr7 (146-251)||(19302540-19302642)
chr7 (156-251)||(19022562-19022658)
chr7 (146-251)||(420347-420453)
chr7 (168-242)||(39629943-39630017)
chr7 (159-251)||(19214383-19214476)
chr7 (146-250)||(34744015-34744120)
chr7 (156-251)||(20526443-20526539)
chr7 (168-251)||(28614443-28614526)
chr7 (146-251)||(45593514-45593621)
chr7 (172-250)||(5947198-5947276)
chr7 (156-233)||(28341052-28341129)
chr7 (147-232)||(38138475-38138561)
chr7 (178-239)||(20428494-20428555)
chr7 (146-232)||(48507709-48507797)
chr7 (146-233)||(45338436-45338523)
chr7 (157-251)||(45790403-45790497)
chr7 (146-216)||(46280284-46280355)
chr7 (172-250)||(34035931-34036009)
chr7 (178-251)||(39279982-39280055)
chr7 (150-230)||(18865050-18865130)
chr7 (172-256)||(30535577-30535660)
chr7 (207-247)||(34464202-34464242)
chr7 (172-251)||(36517593-36517670)
chr7 (171-247)||(43250681-43250756)
chr7 (185-251)||(3308228-3308295)
chr7 (188-251)||(27566671-27566734)
chr7 (157-251)||(33678778-33678873)
chr7 (200-251)||(35056717-35056768)
chr7 (186-232)||(3928006-3928052)
chr7 (200-250)||(5947283-5947333)
chr7 (146-251)||(19718994-19719098)
chr7 (157-210)||(20881654-20881708)
chr7 (200-250)||(43219623-43219672)
chr7 (186-251)||(20526906-20526971)
chr7 (162-242)||(40377838-40377919)
chr7 (158-221)||(2825238-2825302)
chr7 (146-197)||(4970824-4970876)
chr7 (179-251)||(17248574-17248645)
chr7 (214-250)||(27288003-27288039)
chr7 (146-221)||(39907790-39907866)
chr7 (200-248)||(43219785-43219832)
[»] chr3 (53 HSPs)
chr3 (146-251)||(53789438-53789544)
chr3 (146-250)||(18405809-18405914)
chr3 (159-251)||(21367667-21367760)
chr3 (147-246)||(30443881-30443981)
chr3 (156-251)||(39980726-39980822)
chr3 (146-251)||(20880463-20880569)
chr3 (146-249)||(36631030-36631134)
chr3 (168-251)||(402519-402602)
chr3 (158-251)||(22203429-22203523)
chr3 (168-248)||(901934-902014)
chr3 (168-251)||(24085315-24085398)
chr3 (144-230)||(35959454-35959541)
chr3 (146-251)||(20170510-20170616)
chr3 (146-251)||(46778168-46778273)
chr3 (156-256)||(584043-584144)
chr3 (156-236)||(46478684-46478767)
chr3 (172-251)||(46031004-46031083)
chr3 (200-251)||(49556900-49556951)
chr3 (144-241)||(4401032-4401127)
chr3 (205-251)||(31365165-31365211)
chr3 (146-251)||(37689218-37689322)
chr3 (172-250)||(45541585-45541662)
chr3 (159-251)||(34610783-34610876)
chr3 (146-251)||(20257522-20257629)
chr3 (171-242)||(28795839-28795910)
chr3 (147-240)||(13715560-13715656)
chr3 (186-251)||(9832732-9832797)
chr3 (172-221)||(33883757-33883806)
chr3 (146-218)||(47132318-47132391)
chr3 (172-240)||(466207-466275)
chr3 (200-244)||(26911627-26911671)
chr3 (159-246)||(39602193-39602280)
chr3 (157-220)||(44061032-44061095)
chr3 (144-243)||(46886677-46886777)
chr3 (189-248)||(5391910-5391968)
chr3 (208-251)||(10277322-10277365)
chr3 (172-251)||(30573892-30573970)
chr3 (146-251)||(1816570-1816675)
chr3 (172-242)||(3845549-3845618)
chr3 (156-217)||(26990502-26990564)
chr3 (200-250)||(39723219-39723268)
chr3 (157-218)||(44747418-44747480)
chr3 (187-248)||(944591-944652)
chr3 (147-195)||(12862281-12862330)
chr3 (190-251)||(25453836-25453897)
chr3 (157-221)||(28622006-28622071)
chr3 (159-251)||(36887504-36887596)
chr3 (159-251)||(41644423-41644515)
chr3 (185-246)||(43062718-43062779)
chr3 (215-251)||(31365286-31365322)
chr3 (171-251)||(37389196-37389276)
chr3 (200-248)||(39723381-39723428)
chr3 (164-251)||(49465643-49465730)
[»] chr1 (61 HSPs)
chr1 (146-251)||(49938734-49938840)
chr1 (171-251)||(15477578-15477658)
chr1 (146-251)||(3233992-3234098)
chr1 (146-251)||(17603361-17603467)
chr1 (146-245)||(24915034-24915134)
chr1 (146-248)||(14576634-14576736)
chr1 (146-248)||(30286499-30286603)
chr1 (168-248)||(37631539-37631619)
chr1 (168-251)||(2295106-2295189)
chr1 (173-251)||(37473418-37473496)
chr1 (156-251)||(473161-473256)
chr1 (146-248)||(27976582-27976694)
chr1 (144-250)||(7136977-7137083)
chr1 (168-251)||(29904761-29904844)
chr1 (146-236)||(42174842-42174933)
chr1 (146-236)||(51688692-51688782)
chr1 (168-243)||(51929524-51929599)
chr1 (159-252)||(38503441-38503535)
chr1 (144-251)||(40977380-40977489)
chr1 (146-258)||(13809985-13810098)
chr1 (168-251)||(5720935-5721018)
chr1 (168-251)||(5741616-5741699)
chr1 (144-251)||(45975675-45975783)
chr1 (146-251)||(6556958-6557065)
chr1 (146-251)||(27970271-27970378)
chr1 (158-251)||(10744300-10744393)
chr1 (157-250)||(37842334-37842427)
chr1 (188-250)||(41184628-41184690)
chr1 (171-256)||(27820169-27820253)
chr1 (147-251)||(34290224-34290328)
chr1 (156-251)||(43230749-43230843)
chr1 (146-249)||(14331970-14332072)
chr1 (172-251)||(10199386-10199464)
chr1 (168-235)||(27820330-27820397)
chr1 (172-235)||(41195187-41195249)
chr1 (168-250)||(3887610-3887692)
chr1 (173-251)||(10280664-10280741)
chr1 (157-246)||(25479579-25479668)
chr1 (192-250)||(36872299-36872357)
chr1 (172-250)||(51695473-51695551)
chr1 (171-251)||(33186318-33186399)
chr1 (146-256)||(36872719-36872826)
chr1 (205-250)||(37517144-37517189)
chr1 (146-223)||(47432083-47432160)
chr1 (148-251)||(2777881-2777984)
chr1 (157-256)||(28689425-28689526)
chr1 (190-250)||(36872458-36872518)
chr1 (146-251)||(12287169-12287275)
chr1 (205-248)||(44217151-44217194)
chr1 (157-215)||(49888765-49888824)
chr1 (146-223)||(1510315-1510393)
chr1 (172-250)||(7941620-7941698)
chr1 (201-251)||(38001639-38001688)
chr1 (146-250)||(1509738-1509843)
chr1 (157-249)||(23902047-23902139)
chr1 (200-249)||(35925732-35925780)
chr1 (159-251)||(38882889-38882981)
chr1 (205-245)||(341494-341534)
chr1 (186-250)||(27145714-27145777)
chr1 (219-251)||(41505745-41505777)
chr1 (205-245)||(42575452-42575492)
[»] chr4 (49 HSPs)
chr4 (156-251)||(17822842-17822938)
chr4 (146-251)||(21731633-21731739)
chr4 (144-251)||(22030188-22030296)
chr4 (146-251)||(50681066-50681172)
chr4 (146-242)||(55414406-55414503)
chr4 (174-250)||(13126554-13126630)
chr4 (167-251)||(29657393-29657477)
chr4 (168-256)||(30668339-30668426)
chr4 (149-251)||(50662715-50662818)
chr4 (159-251)||(54426043-54426136)
chr4 (146-240)||(2244035-2244133)
chr4 (146-245)||(7839344-7839444)
chr4 (171-251)||(25904200-25904280)
chr4 (4-72)||(30668518-30668585)
chr4 (148-248)||(55302238-55302339)
chr4 (168-252)||(26841-26924)
chr4 (156-251)||(41512648-41512744)
chr4 (145-250)||(46588051-46588158)
chr4 (157-251)||(35571608-35571703)
chr4 (168-251)||(39603147-39603230)
chr4 (146-248)||(53294094-53294197)
chr4 (200-250)||(41336802-41336852)
chr4 (159-251)||(2996573-2996665)
chr4 (174-251)||(24169279-24169356)
chr4 (178-251)||(55064855-55064928)
chr4 (159-251)||(37863932-37864022)
chr4 (184-251)||(20109611-20109678)
chr4 (172-241)||(1407970-1408040)
chr4 (200-250)||(49939929-49939979)
chr4 (146-218)||(16199991-16200064)
chr4 (185-250)||(21523585-21523649)
chr4 (157-256)||(1203088-1203188)
chr4 (168-251)||(25332784-25332868)
chr4 (152-239)||(40831019-40831106)
chr4 (200-248)||(43886112-43886159)
chr4 (200-248)||(56249566-56249613)
chr4 (157-251)||(1706620-1706715)
chr4 (199-242)||(3069960-3070003)
chr4 (172-219)||(28614817-28614864)
chr4 (146-251)||(20108996-20109102)
chr4 (168-250)||(46592187-46592269)
chr4 (147-251)||(29912936-29913040)
chr4 (191-244)||(49003859-49003912)
chr4 (146-242)||(54069403-54069500)
chr4 (161-221)||(55084488-55084549)
chr4 (205-245)||(15173286-15173326)
chr4 (172-239)||(20031763-20031831)
chr4 (157-251)||(28615332-28615427)
chr4 (159-256)||(42641612-42641711)
[»] chr2 (65 HSPs)
chr2 (146-251)||(41851522-41851628)
chr2 (156-251)||(43279506-43279602)
chr2 (146-251)||(15757635-15757741)
chr2 (172-251)||(45229525-45229604)
chr2 (147-251)||(32592574-32592679)
chr2 (146-251)||(41812069-41812173)
chr2 (176-248)||(33981140-33981212)
chr2 (156-250)||(26202025-26202120)
chr2 (146-251)||(20952342-20952448)
chr2 (157-248)||(18066126-18066218)
chr2 (168-251)||(39659486-39659569)
chr2 (172-251)||(41293140-41293219)
chr2 (157-250)||(750669-750762)
chr2 (159-251)||(1625900-1625993)
chr2 (146-250)||(5745763-5745868)
chr2 (152-240)||(9174808-9174897)
chr2 (171-251)||(20926516-20926595)
chr2 (146-240)||(12464461-12464556)
chr2 (184-251)||(13325596-13325663)
chr2 (168-250)||(7035545-7035627)
chr2 (173-251)||(16451133-16451211)
chr2 (146-250)||(41241111-41241215)
chr2 (146-250)||(41407289-41407394)
chr2 (190-251)||(43570446-43570506)
chr2 (159-246)||(40279197-40279285)
chr2 (171-250)||(1647249-1647327)
chr2 (172-251)||(4606939-4607018)
chr2 (176-250)||(7928276-7928351)
chr2 (173-256)||(23974465-23974547)
chr2 (172-251)||(26626887-26626966)
chr2 (167-250)||(33192211-33192293)
chr2 (146-235)||(33319807-33319895)
chr2 (160-246)||(40279268-40279355)
chr2 (160-246)||(40279338-40279425)
chr2 (159-240)||(12289797-12289879)
chr2 (186-251)||(2227194-2227259)
chr2 (159-251)||(28677637-28677729)
chr2 (146-240)||(12194939-12195035)
chr2 (207-251)||(38916286-38916330)
chr2 (188-247)||(449877-449936)
chr2 (200-251)||(787374-787424)
chr2 (172-251)||(8017448-8017526)
chr2 (158-240)||(29316764-29316846)
chr2 (162-248)||(31561722-31561809)
chr2 (200-251)||(33503049-33503099)
chr2 (172-251)||(35378994-35379072)
chr2 (169-244)||(36125372-36125447)
chr2 (174-240)||(3611242-3611308)
chr2 (169-251)||(10619197-10619279)
chr2 (178-248)||(36043924-36043994)
chr2 (160-249)||(40158719-40158808)
chr2 (205-251)||(42420200-42420246)
chr2 (172-245)||(680517-680589)
chr2 (144-251)||(2142638-2142747)
chr2 (201-250)||(5902528-5902576)
chr2 (149-222)||(12795782-12795855)
chr2 (185-250)||(15305701-15305766)
chr2 (214-251)||(20933787-20933824)
chr2 (161-222)||(23956038-23956099)
chr2 (172-245)||(42457962-42458035)
chr2 (171-248)||(43717117-43717193)
chr2 (211-251)||(1801721-1801760)
chr2 (200-252)||(19608609-19608661)
chr2 (207-251)||(24100977-24101021)
chr2 (183-251)||(43529836-43529903)
[»] chr5 (50 HSPs)
chr5 (146-250)||(16937861-16937966)
chr5 (146-251)||(16457956-16458062)
chr5 (168-251)||(12857682-12857765)
chr5 (159-250)||(3735136-3735228)
chr5 (144-251)||(12857315-12857423)
chr5 (172-251)||(10639967-10640046)
chr5 (172-251)||(39105478-39105557)
chr5 (157-251)||(1464997-1465091)
chr5 (150-251)||(29925832-29925934)
chr5 (146-246)||(40426752-40426853)
chr5 (146-251)||(43300865-43300971)
chr5 (149-248)||(32009682-32009783)
chr5 (168-245)||(37954696-37954773)
chr5 (172-251)||(7705975-7706054)
chr5 (157-250)||(2568656-2568749)
chr5 (185-251)||(35446082-35446148)
chr5 (146-250)||(25461078-25461183)
chr5 (185-249)||(34669708-34669773)
chr5 (159-223)||(13697764-13697828)
chr5 (171-251)||(42500219-42500298)
chr5 (160-226)||(4014426-4014493)
chr5 (172-251)||(7984983-7985062)
chr5 (158-251)||(17368675-17368768)
chr5 (173-251)||(29845413-29845489)
chr5 (168-242)||(39477893-39477967)
chr5 (176-250)||(42646685-42646759)
chr5 (160-248)||(9202728-9202817)
chr5 (215-251)||(2973521-2973557)
chr5 (172-247)||(3280696-3280771)
chr5 (146-221)||(7907868-7907944)
chr5 (185-240)||(3932664-3932719)
chr5 (168-251)||(9107100-9107183)
chr5 (156-242)||(32703263-32703349)
chr5 (200-250)||(706505-706555)
chr5 (157-250)||(6587086-6587179)
chr5 (188-250)||(8334601-8334663)
chr5 (190-251)||(17258861-17258921)
chr5 (207-248)||(31038333-31038374)
chr5 (207-248)||(31047557-31047598)
chr5 (185-250)||(32859698-32859762)
chr5 (185-250)||(32861870-32861934)
chr5 (178-235)||(34160751-34160808)
chr5 (211-251)||(3520630-3520670)
chr5 (200-251)||(6521119-6521171)
chr5 (157-216)||(6593297-6593357)
chr5 (144-251)||(15246818-15246926)
chr5 (147-250)||(32022059-32022163)
chr5 (146-197)||(32942605-32942657)
chr5 (158-210)||(38104875-38104927)
chr5 (157-248)||(41419318-41419409)
[»] chr8 (44 HSPs)
chr8 (146-251)||(26771252-26771358)
chr8 (146-250)||(10758235-10758339)
chr8 (150-251)||(27028822-27028924)
chr8 (146-251)||(38648338-38648444)
chr8 (146-251)||(25930530-25930637)
chr8 (168-250)||(12976223-12976304)
chr8 (191-251)||(8146362-8146422)
chr8 (149-251)||(30251431-30251534)
chr8 (172-251)||(31716204-31716283)
chr8 (185-251)||(10120783-10120849)
chr8 (147-251)||(18133644-18133749)
chr8 (159-251)||(35534590-35534683)
chr8 (159-251)||(35749547-35749640)
chr8 (144-251)||(29168034-29168142)
chr8 (146-251)||(29205795-29205900)
chr8 (170-256)||(43045697-43045783)
chr8 (159-251)||(1930035-1930128)
chr8 (159-251)||(9956791-9956884)
chr8 (159-251)||(16825515-16825607)
chr8 (156-251)||(28763365-28763461)
chr8 (156-251)||(13958061-13958156)
chr8 (157-251)||(10114487-10114582)
chr8 (157-251)||(13459643-13459737)
chr8 (168-246)||(16347200-16347279)
chr8 (185-248)||(35643968-35644031)
chr8 (172-258)||(2458537-2458622)
chr8 (146-251)||(6881914-6882020)
chr8 (146-223)||(11861791-11861869)
chr8 (157-250)||(12782163-12782257)
chr8 (185-251)||(42893467-42893533)
chr8 (178-251)||(1058054-1058126)
chr8 (200-249)||(10383927-10383975)
chr8 (147-251)||(37945585-37945689)
chr8 (200-251)||(32840963-32841014)
chr8 (168-251)||(33808313-33808396)
chr8 (168-251)||(43504761-43504843)
chr8 (200-250)||(3254267-3254316)
chr8 (168-234)||(20672760-20672825)
chr8 (190-239)||(31751546-31751595)
chr8 (214-247)||(40859763-40859796)
chr8 (171-239)||(3536934-3537002)
chr8 (172-244)||(30389113-30389184)
chr8 (146-237)||(31885053-31885141)
chr8 (172-220)||(43717945-43717993)
[»] chr6 (29 HSPs)
chr6 (146-242)||(34430447-34430544)
chr6 (162-242)||(9763563-9763644)
chr6 (146-251)||(20368158-20368263)
chr6 (157-250)||(31624088-31624181)
chr6 (144-248)||(2735054-2735159)
chr6 (170-251)||(35070627-35070708)
chr6 (157-251)||(9093533-9093628)
chr6 (146-223)||(6536602-6536680)
chr6 (185-251)||(9912168-9912234)
chr6 (146-251)||(35099024-35099129)
chr6 (186-250)||(18076231-18076295)
chr6 (191-250)||(848022-848081)
chr6 (150-256)||(24982696-24982803)
chr6 (172-251)||(31813175-31813254)
chr6 (158-251)||(13907584-13907678)
chr6 (199-248)||(24626328-24626377)
chr6 (171-251)||(30641758-30641838)
chr6 (146-208)||(6909892-6909955)
chr6 (200-251)||(19411526-19411577)
chr6 (200-250)||(696644-696693)
chr6 (200-245)||(2027390-2027434)
chr6 (171-243)||(12628355-12628425)
chr6 (188-248)||(18611102-18611163)
chr6 (217-250)||(30926578-30926611)
chr6 (168-212)||(160968-161012)
chr6 (200-248)||(696484-696531)
chr6 (146-249)||(769126-769228)
chr6 (207-251)||(31623599-31623643)
chr6 (157-244)||(34910393-34910481)
[»] scaffold0050 (1 HSPs)
scaffold0050 (163-245)||(58746-58829)
[»] scaffold0221 (1 HSPs)
scaffold0221 (148-248)||(22220-22321)
[»] scaffold0528 (1 HSPs)
scaffold0528 (207-248)||(962-1003)
[»] scaffold0003 (1 HSPs)
scaffold0003 (162-246)||(306329-306413)


Alignment Details
Target: chr7 (Bit Score: 115; Significance: 2e-58; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 144 - 258
Target Start/End: Complemental strand, 33601494 - 33601380
Alignment:
Q  144 tatttttgtatttgctataagttgttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcat 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33601494 tatttttgtatttgctataagttgttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcat 33601395  T
Q  244 aagttctcgaaaaga 258  Q
    |||||||||||||||    
T  33601394 aagttctcgaaaaga 33601380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 146 - 258
Target Start/End: Complemental strand, 33602109 - 33601997
Alignment:
Q  146 tttttgtatttgctataagttgttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataa 245  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33602109 tttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataa 33602010  T
Q  246 gttctcgaaaaga 258  Q
    ||| |||||||||    
T  33602009 gttttcgaaaaga 33601997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 33601642 - 33601563
Alignment:
Q  1 actatgagttgaatatggtggatactcttggtcacgctgatttttagtggtgaggtaaatttagataaactgcttatagc 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33601642 actatgagttgaatatggtggatactcttggtcacgctgatttttagtggtgaggtaaatttagataaactgcttatagc 33601563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 248
Target Start/End: Complemental strand, 17944426 - 17944323
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| || | ||||||||||| ||||| |||||| || || ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||    
T  17944426 tttttgtatatgttgtaagttgttttcataagttatcttggataatttatgaaattaagctgaaaaaagcatatgaaaagtgtcataagctgtttttata 17944327  T
Q  245 agtt 248  Q
    ||||    
T  17944326 agtt 17944323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 27863806 - 27863702
Alignment:
Q  148 tttgtatttgctataagttgtttta-taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataag 246  Q
    ||||||| ||||||||||||||||| ||| |||| ||||||||||||||||  |||||||||||||| || |||||| | ||  ||||||||||||||||    
T  27863806 tttgtatatgctataagttgttttaataaactatattagagaacttatgaacataagctgaaaaaagtttttgaaaattttctcaagctgttttcataag 27863707  T
Q  247 ttctc 251  Q
    |||||    
T  27863706 ttctc 27863702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 39967918 - 39968014
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcg 252  Q
    ||||||||||||||| ||||||||||| |||||||| |||||  |||| |||||| |||||||||| | || |||||||||||||||||||||||||    
T  39967918 gctataagttgttttcataagctatctgagagaactaatgaaaataagttgaaaacagcttatgaacaatgccataagctgttttcataagttctcg 39968014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 11619218 - 11619135
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||  || ||||||||||||| ||||| ||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  11619218 ttttataagctacgttggagaacttatgaaattaagttgaaaaaagcttatgaaaattgtcataagttgttttcataaattctc 11619135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 144 - 250
Target Start/End: Complemental strand, 30571016 - 30570909
Alignment:
Q  144 tatttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    ||||||||||| ||||||||| | |||| |||| |||  || ||||||||||||| ||||  ||||||||||||||||||| ||||||||||||||||||    
T  30571016 tatttttgtatatgctataagctatttttataacctacattggagaacttatgaaattaacatgaaaaaagcttatgaaaattgtcataagctgttttca 30570917  T
Q  243 taagttct 250  Q
     |||||||    
T  30570916 caagttct 30570909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 48470031 - 48470137
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| |  ||||||||||||| ||||||||| ||  | ||||||||||  |||||| ||||||||||||||||| || |||||||||||||||||    
T  48470031 tttttgtatataatataagttgttttcataagctattttgaataacttatgaacataagctcaaaaaagcttatgaaaaatgccataagctgttttcata 48470130  T
Q  245 agttctc 251  Q
    |||||||    
T  48470131 agttctc 48470137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 21568555 - 21568472
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||| || ||||||||||| |  |||| |||||| |||||||||||| ||| |||||||||||||||||||||||    
T  21568555 ttttataagctatattggagaacttatggaactaagttgaaaagagcttatgaaaattgttataagctgttttcataagttctc 21568472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 251
Target Start/End: Complemental strand, 38499969 - 38499890
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||| ||||| |||||||||||||  ||||||| |||||||||||||||| |||||||||||||||| | ||||||||    
T  38499969 ataagcaatcttggagaacttatgaaaataagctggaaaaagcttatgaaaaatgtcataagctgttttgaaaagttctc 38499890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 19302642 - 19302540
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| || ||||||||||||| |||||||||     ||||||||||||  |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  19302642 tttttgtatatgttataagttgtttttataagctata----agaacttatgaaaataagttgaaaaaagtttatgaaaattgtcataagctgttttcata 19302547  T
Q  245 agttctc 251  Q
    | |||||    
T  19302546 aattctc 19302540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 19022658 - 19022562
Alignment:
Q  156 tgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||||||| ||||||||| || |||||||||||||  |||| |||| | | |||||||||| ||||||||| ||||||||||| |||||    
T  19022658 tgctataagttgtttttataagctatattggagaacttatgaaaataagttgaagacaacttatgaaaattgtcataagttgttttcataaattctc 19022562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 420347 - 420453
Alignment:
Q  146 tttttgtatttgctataagttgtttta-taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| |||||||||||||||   |||||||| || |||||||||||||  |||| ||||||| ||||  ||||| ||||||||  ||||||||||    
T  420347 tttttgtatatgctataagttgtttccgtaagctatattggagaacttatgaaaataagttgaaaaaggctttagaaaactgtcataaattgttttcata 420446  T
Q  245 agttctc 251  Q
    |||||||    
T  420447 agttctc 420453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 39630017 - 39629943
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    |||| |||||||| ||  ||||||||||| | |||| ||||||||||||||||||| ||||||||||||||||||    
T  39630017 ttttttaagctatattgaagaacttatgactataagttgaaaaaagcttatgaaaattgtcataagctgttttca 39629943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 19214476 - 19214383
Alignment:
Q  159 tataagttgttt-tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||| |||||||||| ||  ||||||||||||  |||| ||||| ||| ||||||||| ||||||  |||||||||||||||||||    
T  19214476 tataagttgtttgtataagctatattgtagaacttatgaaaataagttgaaacaagtttatgaaaattgtcatttgctgttttcataagttctc 19214383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 34744015 - 34744120
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| || ||||||||||||| ||||||||| || |||||||||| ||  ||||  ||||||||||| |||||| ||||||||| | |||||||     
T  34744015 tttttgtatatggtataagttgttttcataagctatattggagaacttataaaaataaggcgaaaaaagcttgtgaaaattgtcataagttcttttcatt 34744114  T
Q  245 agttct 250  Q
    ||||||    
T  34744115 agttct 34744120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 20526443 - 20526539
Alignment:
Q  156 tgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||| |||||| ||||||||| || ||||||| |||||  |||||| |||| |||||| ||||| ||| |||| ||||||||||||||||||    
T  20526443 tgctataagctgttttcataagctattttggagaactaatgaaaataagctaaaaacagcttacgaaaaatgtgataaactgttttcataagttctc 20526539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 28614443 - 28614526
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||| ||||| | || ||||||||||||| |||| ||||||||||||| |||||| ||| ||| | |||||||||||||||||    
T  28614443 ttttaaaagctgtattggagaacttatgaaattaaactgaaaaaagcttgtgaaaattgttatatgttgttttcataagttctc 28614526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 45593514 - 45593621
Alignment:
Q  146 tttttgtatttgctataagttgtttta-taagctatcttagagaacttatgaatttaagctg-aaaaaagcttatgaaaagtgtcataagctgttttcat 243  Q
    ||||||||| ||||||||| | ||||  ||||||||||| ||||||||| |||  ||| ||| ||||||||||||||||| |||||| || |||||| ||    
T  45593514 tttttgtatatgctataagctatttttctaagctatcttggagaacttacgaaaataaactggaaaaaagcttatgaaaaatgtcatcagatgtttttat 45593613  T
Q  244 aagttctc 251  Q
    ||||||||    
T  45593614 aagttctc 45593621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 5947198 - 5947276
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    |||||||||||  ||||| |||||||  ||||||||||| |||||||||||| || ||||||||| ||||| |||||||    
T  5947198 ataagctatctaggagaagttatgaaaataagctgaaaagagcttatgaaaaatgccataagctggtttcaaaagttct 5947276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 28341129 - 28341052
Alignment:
Q  156 tgctataagttgttt-tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataag 233  Q
    ||||||||||||||| ||||| |||| ||||||||||||||||  ||||||| ||||||||| |||||| |||||||||    
T  28341129 tgctataagttgtttgtataaactatattagagaacttatgaa-ataagctggaaaaagcttttgaaaattgtcataag 28341052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 38138561 - 38138475
Alignment:
Q  147 ttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataa 232  Q
    |||||||| |||||||||||||||| || |||||| ||   |||||||||||  |||| ||||||||||||||||||| ||||||||    
T  38138561 ttttgtatatgctataagttgtttttattagctatattgacgaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataa 38138475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 20428494 - 20428555
Alignment:
Q  178 tatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttt 239  Q
    |||||||| ||||||| |||  ||||||||||||||||||||| || |||||||||||||||    
T  20428494 tatcttagggaacttacgaaaataagctgaaaaaagcttatgagaactgtcataagctgttt 20428555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 48507709 - 48507797
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatc-ttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataa 232  Q
    ||||||||| ||||||||  |||||| |||||| ||| |||||||||||||||| |||||||||||||  ||||| |||| ||||||||    
T  48507709 tttttgtatatgctataaactgttttcataagccatccttagagaacttatgaaattaagctgaaaaatacttataaaaaatgtcataa 48507797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 45338436 - 45338523
Alignment:
Q  146 tttttgtatttgctataagttgttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataag 233  Q
    ||||||||| |||| ||||||||||| |||||||| || ||||||| |||||  |||| |||||||| || || |||| |||||||||    
T  45338436 tttttgtatatgctgtaagttgttttttaagctatattggagaactgatgaaaataagttgaaaaaaactaataaaaattgtcataag 45338523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 251
Target Start/End: Complemental strand, 45790497 - 45790403
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||||| |||| |||| || || ||||||||||  |||||||||||| |||| | |||| ||||||||| | |||||||||||||||    
T  45790497 gctataagttgtttttataaactatattggataacttatgaaaataagctgaaaaa-gcttttaaaaattgtcataagttattttcataagttctc 45790403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 46280355 - 46280284
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagctt 216  Q
    ||||||||| ||||||||| |||||| ||||||||| || |||||||||||||  || ||||||||||||||    
T  46280355 tttttgtatatgctataagctgtttttataagctatattggagaacttatgaaaataggctgaaaaaagctt 46280284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 34035931 - 34036009
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    |||||||||||||||||||||  |||  |||| |||||| | |||||||| | ||||||||| | ||||||||||||||    
T  34035931 ataagctatcttagagaacttgcgaaaataagttgaaaacaacttatgaacaatgtcataagttattttcataagttct 34036009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 39279982 - 39280055
Alignment:
Q  178 tatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||| |||||||| ||||  |||||||||||||||||||| ||| ||  |||||||||||| ||||| ||||    
T  39279982 tatcttggagaacttttgaaaataagctgaaaaaagcttatgtaaaatgctataagctgtttttataagctctc 39280055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 230
Target Start/End: Complemental strand, 18865130 - 18865050
Alignment:
Q  150 tgtatttgctataagttgttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcat 230  Q
    ||||| ||||||||||| ||| ||||| ||| | ||||||||||||||  |||| |||||||| ||||| |||| ||||||    
T  18865130 tgtatatgctataagttttttcataagttatttcagagaacttatgaaaataagttgaaaaaaacttataaaaaatgtcat 18865050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 256
Target Start/End: Original strand, 30535577 - 30535660
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaaaa 256  Q
    ||||||||||||| ||||| ||||||  ||| ||||||| |||||| ||| | | ||||||| ||||||||||||||||| ||||    
T  30535577 ataagctatcttatagaacatatgaaaataacctgaaaacagcttacgaaca-tatcataagttgttttcataagttctccaaaa 30535660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 34464242 - 34464202
Alignment:
Q  207 aaaaaagcttatgaaaagtgtcataagctgttttcataagt 247  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  34464242 aaaaaagcttgtgaaaattgtcataagctgttttcataagt 34464202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 251
Target Start/End: Original strand, 36517593 - 36517670
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||| ||||| |||||||  ||| ||||||| |||||||||| | ||||  |||||||||| ||||||||||    
T  36517593 ataagctatcttggagaaattatgaaaataaactgaaaatagcttatgaacaatgtc--aagctgttttaataagttctc 36517670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 247
Target Start/End: Complemental strand, 43250756 - 43250681
Alignment:
Q  171 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagt 247  Q
    |||||||||| || |||| ||||||||| ||| ||||||| | |||| ||| | |||||||||||||||||||||||    
T  43250756 tataagctattttggagagcttatgaatataaactgaaaacaacttacgaaca-tgtcataagctgttttcataagt 43250681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 3308295 - 3308228
Alignment:
Q  185 gagaacttatgaatttaagctgaaaaaagcttatga-aaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||| ||  ||||||||||||||||||||| ||| || |||||||| |||||| ||||||||    
T  3308295 gagaacttattaaaataagctgaaaaaagcttatgagaaaatggcataagctattttcaaaagttctc 3308228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 251
Target Start/End: Complemental strand, 27566734 - 27566671
Alignment:
Q  188 aacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||  |||| |||||||||||| |||||  ||||||||||| |||||||||| ||||    
T  27566734 aacttatgaaaataagttgaaaaaagcttgtgaaagttgtcataagctattttcataagctctc 27566671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 251
Target Start/End: Original strand, 33678778 - 33678873
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||| |||||| |||||||||||| || ||||| ||||  |||| |||||| | || ||||| | ||| ||||| |||||||||||||||||    
T  33678778 gctataagctgttttcataagctatcttggaaaacttgtgaaaataagttgaaaacatctcatgaacaatgttataagttgttttcataagttctc 33678873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 35056717 - 35056768
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||| ||||||||||||||  |||||||||||| ||||||| ||||||||||    
T  35056717 taagttgaaaaaagcttattgaaagtgtcataatctgtttttataagttctc 35056768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 3928052 - 3928006
Alignment:
Q  186 agaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataa 232  Q
    ||||||||||||  |||| ||||||||||||||||||| ||||||||    
T  3928052 agaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataa 3928006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 5947283 - 5947333
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||| ||||||| |||||||| |||||||||||| ||||| |||||||    
T  5947283 taagctgtaaaaagcatatgaaaaatgtcataagctggtttcaaaagttct 5947333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 19718994 - 19719098
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||  || ||||||||||||| |||| ||||||| ||  |||||| ||  ||||||||||| || ||||||| | ||||||||| ||||||||||    
T  19718994 tttttgtaaatgttataagttgttttcataa-ctatcttggatcacttataaagataagctgaaaacagtttatgaaca-tgtcataagttgttttcata 19719091  T
Q  245 agttctc 251  Q
    |||||||    
T  19719092 agttctc 19719098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 20881708 - 20881654
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaa 210  Q
    ||||||||||||||| |||| |||||||| ||||||||||||  |||||||||||    
T  20881708 gctataagttgttttcataaactatcttaaagaacttatgaaaataagctgaaaa 20881654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 43219672 - 43219623
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||||||| |||||||||| | |||||||||||||||| |||||||||    
T  43219672 taagctgaaaacagcttatgaaca-tgtcataagctgttttgataagttct 43219623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 20526971 - 20526906
Alignment:
Q  186 agaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||  ||||||||||| | ||||| || | | ||||||||||||||||| |||||||    
T  20526971 agaacttatgaaaataagctgaaaagatcttataaacaatctcataagctgttttcatcagttctc 20526906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 40377919 - 40377838
Alignment:
Q  162 aagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    |||||||||| |||| |||| || |||||||||||||  ||| || |||||||||||| ||||  |||| ||||||||||||    
T  40377919 aagttgttttcataacctatattggagaacttatgaaaataaactcaaaaaagcttattaaaatagtcaaaagctgttttca 40377838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 2825302 - 2825238
Alignment:
Q  158 ctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaa 221  Q
    |||||||||||||| | |||||||| ||||||||||||| |  ||||||||||| | ||||||||    
T  2825302 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 2825238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 4970876 - 4970824
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaa 197  Q
    ||||||||| ||||||||||| |||| ||||| ||| ||||||||||||||||    
T  4970876 tttttgtatatgctataagttctttttataagatatattagagaacttatgaa 4970824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 17248574 - 17248645
Alignment:
Q  179 atcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||||||||||  |||| | |||  |||||||||| | ||| |||||||||||| ||||||||||    
T  17248574 atcttagagaacttatgaaaataaggt-aaatcagcttatgaacaatgttataagctgtttttataagttctc 17248645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 27288003 - 27288039
Alignment:
Q  214 cttatgaaaagtgtcataagctgttttcataagttct 250  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  27288003 cttatgaaaattgttataagctgttttcataagttct 27288039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 221
Target Start/End: Original strand, 39907790 - 39907866
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaa 221  Q
    |||||||||  |||||||  |||||| |||| ||||||||||||||| |||||  ||||||||||| |||| |||||    
T  39907790 tttttgtataagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaaaacagctaatgaa 39907866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 43219832 - 43219785
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    |||||| |||| |||||||||| | ||||||||||||||||||||||||    
T  43219832 taagctaaaaacagcttatgaaca-tgtcataagctgttttcataagtt 43219785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 8e-30; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 53789544 - 53789438
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    |||| |||| |||||||||||||| | |||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |    
T  53789544 ttttggtatatgctataagttgttatcataagctatcatggagaacttatgaaattaagctgaaaaaagcttatgaaaagtgtcataagctgtttccaaa 53789445  T
Q  245 agttctc 251  Q
    |||||||    
T  53789444 agttctc 53789438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 146 - 250
Target Start/End: Complemental strand, 18405914 - 18405809
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||||||||||| |||||||  |||||| |||||||||||||| | | |||||||||||    
T  18405914 tttttgtatatgctataagttgttttcataagctatcttggagaacttatgaaattaagcttgaaaaagattatgaaaagtgtcgtgaactgttttcata 18405815  T
Q  245 agttct 250  Q
    ||||||    
T  18405814 agttct 18405809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 21367667 - 21367760
Alignment:
Q  159 tataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||| |||||||||||| |||||||||||||  ||||||||||| ||||| |||| | |||||||||||||||||||||||||||    
T  21367667 tataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataagctgttttcataagttctc 21367760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 30443881 - 30443981
Alignment:
Q  147 ttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataa 245  Q
    |||||||| ||||||||| |||||| |||| |||| || |||||||||||||  ||||||||||||||||| |||||| |||||||||||||||||||||    
T  30443881 ttttgtatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgtcataagctgttttcataa 30443980  T
Q  246 g 246  Q
    |    
T  30443981 g 30443981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 39980726 - 39980822
Alignment:
Q  156 tgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||||||| ||||||||| || |||||||||||||  |||| ||||||||||||||||||   ||||||||||||||||||||||||||    
T  39980726 tgctataagttgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatgaaaccagtcataagctgttttcataagttctc 39980822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 20880463 - 20880569
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| ||||||||  |||||| | ||||||| || |||||||||||||  |||||| ||||||||||||||||| ||||||||||||||||||||    
T  20880463 tttttgtatatgctataaactgtttttaaaagctatattggagaacttatgaaaataagctcaaaaaagcttatgaaaattgtcataagctgttttcata 20880562  T
Q  245 agttctc 251  Q
     ||||||    
T  20880563 ggttctc 20880569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 146 - 249
Target Start/End: Complemental strand, 36631134 - 36631030
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||  |||||||||||||||| || |||||| || |||||||||||||  ||||| ||||||||||| ||||||  ||||||||||| |||||||    
T  36631134 tttttgtacatgctataagttgtttttatgagctatattggagaacttatgaaaataagcagaaaaaagcttttgaaaatcgtcataagctggtttcata 36631035  T
Q  245 agttc 249  Q
    |||||    
T  36631034 agttc 36631030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 402602 - 402519
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||| |||||||  ||||||| |||| |||||||||||| |||||||||| | |||||||||||||||||||| ||||||    
T  402602 ttttataatctatcttgaagaacttgtgaaattaagctgaaaacagcttatgaacaatgtcataagctgttttcatacgttctc 402519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 22203429 - 22203523
Alignment:
Q  158 ctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||||| |||||||||||| |||||||||||||  ||| ||| |  ||||||| | ||| |||||||||||||||||||||||||||    
T  22203429 ctataagttgttttcataagctatcttggagaacttatgaaaataaactgcattaagcttaagtaaaatgtcataagctgttttcataagttctc 22203523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 901934 - 902014
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    ||||||||||||| || |||||||||||||  |||| ||||||||||||||| ||| ||| || |||||||||||||||||    
T  901934 ttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatggaaaatgttattagctgttttcataagtt 902014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 24085398 - 24085315
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||| ||||||||||| |||||||| ||||  ||||||||||| ||| |||||| |||  ||||||||||||||||||||||||    
T  24085398 ttttgtaagctatcttggagaacttgtgaaaataagctgaaaacagcgtatgaacagtaccataagctgttttcataagttctc 24085315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 230
Target Start/End: Complemental strand, 35959541 - 35959454
Alignment:
Q  144 tatttttgtatttgctataagttgttt-tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcat 230  Q
    ||||||||||| |||| |||||||||| |||||||||| |||||||| || ||||  ||||||||||||||||| |||||| ||||||    
T  35959541 tatttttgtatatgctgtaagttgtttctataagctatattagagaatttttgaaaataagctgaaaaaagcttttgaaaattgtcat 35959454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 20170510 - 20170616
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| |||||||||||||||| | ||| ||| || ||||||| |||||  |||| ||||||||||||||||||| |  ||| |||||||||| ||    
T  20170510 tttttgtatatgctataagttgtttttacaagttatttttgagaactaatgaaaataagttgaaaaaagcttatgaaaaatcccattagctgttttctta 20170609  T
Q  245 agttctc 251  Q
    |||||||    
T  20170610 agttctc 20170616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 46778273 - 46778168
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||| | ||||||||  |||||| |||| ||||||| || |||||||||| | |||||||| ||| |||||||||| ||||||||| ||||||||||    
T  46778273 tttttgtttatgctataaactgttttcataaactatcttggacaacttatgaaat-aagctgaacaaaacttatgaaaaatgtcataagttgttttcata 46778175  T
Q  245 agttctc 251  Q
    |||||||    
T  46778174 agttctc 46778168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 584043 - 584144
Alignment:
Q  156 tgctataagtt-gttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaa 254  Q
    ||||||||||| |||| ||||||||||||  |||||||||||| ||||||| ||| || | |||||||| || | |||||||||||||||| ||||| ||    
T  584043 tgctataagttagtttcataagctatcttgaagaacttatgaaattaagcttaaagaaacctatgaaaactgccgtaagctgttttcataaattctccaa 584142  T
Q  255 aa 256  Q
    ||    
T  584143 aa 584144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 46478684 - 46478767
Alignment:
Q  156 tgctataagttg-ttttataagctatct--tagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 236  Q
    |||||||||||| ||||||||||||| |  | |||||||||||||  |||| ||||||||||||||||||| ||||||||||||    
T  46478684 tgctataagttggttttataagctatatattggagaacttatgaaaataagttgaaaaaagcttatgaaaactgtcataagctg 46478767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 251
Target Start/End: Original strand, 46031004 - 46031083
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||| ||||||| |||||||||| ||  ||||||||||| |||||||||| | ||||||| ||||||||| |||||||||    
T  46031004 ataaactatcttggagaacttattaaaataagctgaaaacagcttatgaataatgtcataggctgttttcgtaagttctc 46031083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 49556900 - 49556951
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  49556900 taagttgaaaaaagcttatgaaaattgtcataagctgttttcataaattctc 49556951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 4401032 - 4401127
Alignment:
Q  144 tatttttgtatttgctataagttgttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttc 241  Q
    |||||| |||| |||||||||||||||||  || ||| || |||||||||||||  |||| | |||| |||||||| ||| |||||||||||||||||    
T  4401032 tattttcgtatatgctataagttgtttta--agttatattggagaacttatgaaaataagttaaaaacagcttatggaaattgtcataagctgttttc 4401127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 31365211 - 31365165
Alignment:
Q  205 tgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||    
T  31365211 tgaaaaaagcttatgaaaattgtcataagctgctttcataagttctc 31365165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 37689218 - 37689322
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| ||||||| |||||||| || || ||| | |||| |||||||||  |||| |||||||||||| |||||| ||||||||||||||||| ||    
T  37689218 tttttgtatatgctataggttgtttttatgag-tatatcagagcacttatgaaaataagttgaaaaaagctt-tgaaaattgtcataagctgttttctta 37689315  T
Q  245 agttctc 251  Q
    |||||||    
T  37689316 agttctc 37689322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 45541585 - 45541662
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    |||||||||||| || |||||||||   ||| ||||||| |||||||||| | ||||||||||||||||||||||||||    
T  45541585 ataagctatcttggataacttatgagaataacctgaaaacagcttatgaaca-tgtcataagctgttttcataagttct 45541662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 34610876 - 34610783
Alignment:
Q  159 tataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||| ||| |||||||||||| | |||||||||||  | |||||||||   |||||||| | |||||||||| ||||||||||||||||    
T  34610876 tataagttgctttcataagctatcttggcgaacttatgaaaatcagctgaaaaccacttatgaacaatgtcataagcagttttcataagttctc 34610783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 20257522 - 20257629
Alignment:
Q  146 tttttgtatttgctataagttgttttat-aagctatcttagagaacttatgaatt-taagctgaaaaaagcttatgaaaagtgtcataagctgttttcat 243  Q
    ||||||||| |||||||||||||||| | ||||||| || |||| ||||||||   |||| |  ||||| |||||||||| |||||| ||||| ||||||    
T  20257522 tttttgtatatgctataagttgttttttgaagctatattggagagcttatgaaaaataagttttaaaaaacttatgaaaattgtcattagctgctttcat 20257621  T
Q  244 aagttctc 251  Q
    ||||||||    
T  20257622 aagttctc 20257629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 28795910 - 28795839
Alignment:
Q  171 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    |||||||||| ||||||||||||||||  ||||||||||| |||||| ||||| ||||| || | |||||||    
T  28795910 tataagctatattagagaacttatgaaaataagctgaaaagagcttaagaaaattgtcaaaaaccgttttca 28795839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 240
Target Start/End: Complemental strand, 13715656 - 13715560
Alignment:
Q  147 ttttgtatttgctataagttgtttt---ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtttt 240  Q
    |||||||| || |||||||||||||   |||||| || || || ||||||||||  |||| ||||||| ||||||||||  ||||||||||||||||    
T  13715656 ttttgtatatgatataagttgtttttatataagcgatattggacaacttatgaaaataagttgaaaaatgcttatgaaagttgtcataagctgtttt 13715560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 9832797 - 9832732
Alignment:
Q  186 agaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||| ||| |||| ||||||||| |||||||||  | ||||||||||||||| ||||||||    
T  9832797 agaacttataaatataagttgaaaaaagtttatgaaaaaaggcataagctgttttcaaaagttctc 9832732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 33883806 - 33883757
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaa 221  Q
    ||||||||||||||||||||||||||  ||||||||||| | ||||||||    
T  33883806 ataagctatcttagagaacttatgaaaataagctgaaaacaacttatgaa 33883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 47132318 - 47132391
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttat 218  Q
    ||||||||| ||||||| |||||||| ||||||||| || ||||| |||||||  |||| ||||||||||||||    
T  47132318 tttttgtatatgctataggttgtttttataagctatattggagaagttatgaaaataagttgaaaaaagcttat 47132391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 240
Target Start/End: Original strand, 466207 - 466275
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtttt 240  Q
    ||||||||| || |||||||||||||  |||||| ||||||||||| ||||| ||| | ||||||||||    
T  466207 ataagctatgttggagaacttatgaaaataagctaaaaaaagcttaagaaaaatgttaaaagctgtttt 466275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 26911627 - 26911671
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    |||| |||||||| |||||||||| ||||||||||||||||||||    
T  26911627 taagttgaaaaaaacttatgaaaattgtcataagctgttttcata 26911671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 39602280 - 39602193
Alignment:
Q  159 tataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataag 246  Q
    |||||| |||||| |||||||||||| |||||||||||||  |||| |||||| |  ||||||| | ||||||||||||| ||||||||    
T  39602280 tataagctgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaaca-tgtcataagctgtcttcataag 39602193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 44061095 - 44061032
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatga 220  Q
    ||||||||||||||| ||| | |||||||||||||||||||| ||||||| |||| |||||||||    
T  44061095 gctataagttgttttcatatgatatcttagagaacttatgaaattaagct-aaaacagcttatga 44061032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 243
Target Start/End: Complemental strand, 46886777 - 46886677
Alignment:
Q  144 tatttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    |||||||||||  |||||||| |||||| |||||||||||| |||||||| ||||  ||| ||||| | | |||| ||| | || |||||||||||||||    
T  46886777 tatttttgtatgagctataagctgttttcataagctatcttggagaacttttgaaaataacctgaacataacttacgaacaatgccataagctgttttca 46886678  T
Q  243 t 243  Q
    |    
T  46886677 t 46886677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 5391910 - 5391968
Alignment:
Q  189 acttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    |||||||||  |||| |||||| |||||||||| | ||||||||||||||||||||||||    
T  5391910 acttatgaaaataagttgaaaacagcttatgaaca-tgtcataagctgttttcataagtt 5391968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 251
Target Start/End: Complemental strand, 10277365 - 10277322
Alignment:
Q  208 aaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||    
T  10277365 aaaaagcttatggaaaatgtcataagctgttttcatatgttctc 10277322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 251
Target Start/End: Complemental strand, 30573970 - 30573892
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||| |||| || |||||  ||||||||||| |||||||||| | || |||||  |||||||||||||||||    
T  30573970 ataagctatcttggagagctgatgaacataagctgaaaacagcttatgaaca-tgccataatttgttttcataagttctc 30573892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 1816570 - 1816675
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    |||||||||  | ||||||||||||| |||||||||  | |||| ||||| ||  ||||||||||| ||| |||||||| ||||||||| | ||||||||    
T  1816570 tttttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagctgaaaacagcctatgaaaa-tgtcataagttattttcata 1816668  T
Q  245 agttctc 251  Q
     ||||||    
T  1816669 tgttctc 1816675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 3845618 - 3845549
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    ||||| |||||| |||||||||||||  |||||||||||||| |||| |||| |||||||| |||| ||||    
T  3845618 ataagttatcttggagaacttatgaaaataagctgaaaaaagattat-aaaaatgtcataatctgtcttca 3845549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 26990564 - 26990502
Alignment:
Q  156 tgctataagttgtttta-taagctatcttagagaacttatgaatttaagctgaaaaaagctta 217  Q
    ||||| ||||||||||  ||||||||||  |||||||||||||  ||||||||||||||||||    
T  26990564 tgctacaagttgttttcctaagctatctcggagaacttatgaaaataagctgaaaaaagctta 26990502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 39723268 - 39723219
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||||||| |||||||||| | |||||||||||||||| |||||||||    
T  39723268 taagctgaaaacagcttatgaaca-tgtcataagctgttttgataagttct 39723219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 44747480 - 44747418
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttat 218  Q
    |||||||| |||||| |||||||||||| || ||||||||||  |||||||||| ||||||||    
T  44747480 gctataagctgttttcataagctatcttggaaaacttatgaaaataagctgaaagaagcttat 44747418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 944591 - 944652
Alignment:
Q  187 gaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    |||| ||||||  |||| ||||||||| ||||| ||| ||||||||||| ||||||||||||    
T  944591 gaacatatgaaagtaagttgaaaaaagattatggaaattgtcataagctattttcataagtt 944652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 12862330 - 12862281
Alignment:
Q  147 ttttgtatttgctataagttgtttt-ataagctatcttagagaacttatg 195  Q
    |||||||| |||||||||||||||| ||||||||| || |||||||||||    
T  12862330 ttttgtatatgctataagttgttttcataagctatattggagaacttatg 12862281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 25453897 - 25453836
Alignment:
Q  190 cttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||  ||||||||||| ||||| |||| | | ||||||||||||||||||| |||||    
T  25453897 cttatgaaaataagctgaaaagagcttgtgaacattttcataagctgttttcataaattctc 25453836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 28622071 - 28622006
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaa 221  Q
    |||||||| |||||| |||| ||||||| |||||||||||||  ||| ||||||| ||||||||||    
T  28622071 gctataagctgttttcataaactatcttcgagaacttatgaaaataacctgaaaacagcttatgaa 28622006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 36887504 - 36887596
Alignment:
Q  159 tataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||| |||||| |||||  ||||||||||||  ||||||||||| | |||||||| | ||||| ||| | |||| ||||||||||    
T  36887504 tataagttgttttcataagccatcttgaagaacttatgaaaataagctgaaaacatcttatgaaca-tgtcaaaagttcttttgataagttctc 36887596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 41644515 - 41644423
Alignment:
Q  159 tataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||| |||||| |||||||||| |||||| |||| | |  ||||||||||| |||||||||||| ||||  ||| |||||| ||||||||||    
T  41644515 tataagctgttttcataagctatcgtagagatcttaaggaaataagctgaaaacagcttatgaaaa-tgtcccaagttgtttttataagttctc 41644423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 43062718 - 43062779
Alignment:
Q  185 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataag 246  Q
    |||||||||||||   |||||||||||||||| |||||| || ||||  |||||||||||||    
T  43062718 gagaacttatgaaaagaagctgaaaaaagcttgtgaaaattgccatatactgttttcataag 43062779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 31365322 - 31365286
Alignment:
Q  215 ttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  31365322 ttatgaaaattgtcataagctgtattcataagttctc 31365286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 37389196 - 37389276
Alignment:
Q  171 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||| ||| ||||||||   |||||| |||  ||| | |||| | ||||||||| |||||||||||||||||    
T  37389196 tataagctatcttggagtacttatgagaataagctaaaagcagcatttgaacaatgtcataagttgttttcataagttctc 37389276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 39723428 - 39723381
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    |||||| |||| |||||||||| | ||||||||||||||||||||||||    
T  39723428 taagctaaaaacagcttatgaaca-tgtcataagctgttttcataagtt 39723381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 251
Target Start/End: Complemental strand, 49465730 - 49465643
Alignment:
Q  164 gttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||| |||||||||  | ||||||||||| |  |||||| |||||| || ||||| | ||| |||||||||||||||||||||||    
T  49465730 gttgttttcataagctatactggagaacttatggaaataagcttaaaaaacctaatgaaca-tgtaataagctgttttcataagttctc 49465643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 8e-30; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 49938734 - 49938840
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| || ||||||||||||| ||||||||| ||||||||||||||||  |||| |||||||||||| |||||| ||||||||||||||||||||    
T  49938734 tttttgtatatgttataagttgtttttataagctatattagagaacttatgaaaataagttgaaaaaagcttttgaaaattgtcataagctgttttcata 49938833  T
Q  245 agttctc 251  Q
    |||||||    
T  49938834 agttctc 49938840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 15477578 - 15477658
Alignment:
Q  171 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||| ||| ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  15477578 tataagttatattagagaacttatgaatataagctgaaaaaagcttttgaaaattgtcataagctgttttcataagttctc 15477658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 3234098 - 3233992
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| |||||||||||||||| ||||||||| || |||||||||||||  ||||  ||||||| |||||||||| ||| ||||| ||||||||||    
T  3234098 tttttgtatatgctataagttgtttttataagctatattggagaacttatgaaaataagtagaaaaaaacttatgaaaactgttataagttgttttcata 3233999  T
Q  245 agttctc 251  Q
    |||||||    
T  3233998 agttctc 3233992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 17603467 - 17603361
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| |||||||||||||||| ||||||||| || |||||||| ||||  |||| || |||||| ||||||||| ||||||||||||||||| ||    
T  17603467 tttttgtatatgctataagttgtttttataagctatattggagaacttctgaaaataagttgtaaaaagtttatgaaaattgtcataagctgttttcgta 17603368  T
Q  245 agttctc 251  Q
    |||||||    
T  17603367 agttctc 17603361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 245
Target Start/End: Complemental strand, 24915134 - 24915034
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| ||||||||| |||||| ||||||| |||| |||||||| ||||  |||| ||||||||||||||||||| ||||||||| ||||||||||    
T  24915134 tttttgtatatgctataagctgttttcataagctgtcttggagaacttgtgaaaataagttgaaaaaagcttatgaaaaatgtcataagttgttttcata 24915035  T
Q  245 a 245  Q
    |    
T  24915034 a 24915034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 146 - 248
Target Start/End: Complemental strand, 14576736 - 14576634
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| |||||||| || |||| ||||||||| ||||||||||| ||||  ||||||||||||||||| |||||| |||||||||||||||||| |    
T  14576736 tttttgtatatgctataatttttttttataagctatattagagaactt-tgaaaataagctgaaaaaagcttttgaaaattgtcataagctgttttcaca 14576638  T
Q  245 agtt 248  Q
    ||||    
T  14576637 agtt 14576634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 146 - 248
Target Start/End: Complemental strand, 30286603 - 30286499
Alignment:
Q  146 tttttgtat-ttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcat 243  Q
    ||||||||| ||||||||||||||||| ||||||||| ||  |||||| |  || || || ||||||||||||||||||| |||||||||||||||||||    
T  30286603 tttttgtatgttgctataagttgtttttataagctattttgaagaactaagaaaatttagttgaaaaaagcttatgaaaattgtcataagctgttttcat 30286504  T
Q  244 aagtt 248  Q
    |||||    
T  30286503 aagtt 30286499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 37631619 - 37631539
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    |||| |||||||| || |||||||||||||  ||||||||||||||||| |||||| ||||| ||||||||||||||||||    
T  37631619 ttttgtaagctatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgtcagaagctgttttcataagtt 37631539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 2295106 - 2295189
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||| | ||||||||| ||||  |||| |||| | |||||||||||| |||||||||||||||||||||||||||    
T  2295106 ttttataagctatatcagagaacttgtgaaaataagttgaatagagcttatgaaaattgtcataagctgttttcataagttctc 2295189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 251
Target Start/End: Original strand, 37473418 - 37473496
Alignment:
Q  173 taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||| |||||| |||||||||||||  ||||||| |||||||||||||||| ||||||||| |||||||| ||||||||    
T  37473418 taagttatcttggagaacttatgaaaataagctggaaaaagcttatgaaaaatgtcataagttgttttcaaaagttctc 37473496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 473161 - 473256
Alignment:
Q  156 tgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||||||| ||||| | | || |||||||||||||  |||| ||||||||||||||||||| ||| ||||||| |||||||||||||||    
T  473161 tgctataagttgtttttataagttctattggagaacttatgaaaataagttgaaaaaagcttatgaaaattgt-ataagcttttttcataagttctc 473256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 248
Target Start/End: Original strand, 27976582 - 27976694
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaactta---------tgaatttaagctgaaaaaagcttatgaaaagtgtcataagct 235  Q
    ||||||||| |||||||||||||||| |||||||||||| |||||||||         ||||  |||||||||||||||||||||||| |||||||||||    
T  27976582 tttttgtatatgctataagttgttttcataagctatcttcgagaacttaatgaaataatgaaaataagctgaaaaaagcttatgaaaaatgtcataagct 27976681  T
Q  236 gttttcataagtt 248  Q
     |||||| |||||    
T  27976682 attttcaaaagtt 27976694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 250
Target Start/End: Complemental strand, 7137083 - 7136977
Alignment:
Q  144 tatttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    |||||||||||   ||||||| |||||| |||||||||||| |||||||||||||  ||||||||||| | |||||||| | ||||||||||  ||||||    
T  7137083 tatttttgtataatctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatgaata-tgtcataagcgattttca 7136985  T
Q  243 taagttct 250  Q
    ||||||||    
T  7136984 taagttct 7136977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 29904761 - 29904844
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||| |||| ||| ||||||||||||  |||| |||||||||||| |||||| || ||||||||||||| ||||||||||    
T  29904761 ttttataaactatattatagaacttatgaaaataaggtgaaaaaagcttttgaaaattgccataagctgtttttataagttctc 29904844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 236
Target Start/End: Original strand, 42174842 - 42174933
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 236  Q
    ||||||||| |||||||||||||||| ||||| ||| || |||||||||||||  |||| | |||| |||||||||||| ||||||||||||    
T  42174842 tttttgtatatgctataagttgtttttataagttatattggagaacttatgaaaataagttaaaaacagcttatgaaaattgtcataagctg 42174933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 236
Target Start/End: Original strand, 51688692 - 51688782
Alignment:
Q  146 tttttgtatttgctataagttgtttta-taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 236  Q
    ||||||||  ||||||||||||||||  ||||||||| | |||| |||||||| |||||||||||||| ||| |||||||||||||||||||    
T  51688692 tttttgtacatgctataagttgttttcgtaagctatcgtggaga-cttatgaaattaagctgaaaaaaacttctgaaaagtgtcataagctg 51688782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 51929599 - 51929524
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcat 243  Q
    |||||||| |||| || ||||||||||| |  |||| ||||||||||||||||||| |||||||||||||||||||    
T  51929599 ttttataaactatattggagaacttatggaaataagttgaaaaaagcttatgaaaattgtcataagctgttttcat 51929524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 38503535 - 38503441
Alignment:
Q  159 tataagttgtttta-taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcg 252  Q
    |||||||||||||  | ||||||||| |||||||||||||  ||||||||||| | |||||||| | ||||||| ||||||| ||||||||||||    
T  38503535 tataagttgtttttgttagctatcttggagaacttatgaaaataagctgaaaacaacttatgaacaatgtcataggctgtttccataagttctcg 38503441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 251
Target Start/End: Complemental strand, 40977489 - 40977380
Alignment:
Q  144 tatttttgtatttgctataagttg--ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttc 241  Q
    ||||||||||| ||||||||| |   |||||||||| || | ||||||| ||||||  ||||||| ||||||||| |||||| ||||||||  |||||||    
T  40977489 tatttttgtatatgctataaggttaattttataagccatataagagaacatatgaaaataagctggaaaaagcttttgaaaattgtcataaattgttttc 40977390  T
Q  242 ataagttctc 251  Q
    ||||||||||    
T  40977389 ataagttctc 40977380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 258
Target Start/End: Original strand, 13809985 - 13810098
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| |||||||  ||||||| |||| |||| ||||||||||| ||||  |||||| | |||| ||| |||||| |||||||| |||| ||||||    
T  13809985 tttttgtatatgctatatattgtttttataaactatattagagaacttgtgaaaataagctaagaaaaacttttgaaaattgtcataaactgtattcata 13810084  T
Q  245 agttctcgaaaaga 258  Q
    ||||||| ||||||    
T  13810085 agttctctaaaaga 13810098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 5720935 - 5721018
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaag-cttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||| ||||||||| ||||||  | |||||||||||  |||||||||  |||||||||||||||||||||||||||    
T  5720935 ttttataagctatattagagaacatatgaaaatcagctgaaaaaatacttatgaaat-tgtcataagctgttttcataagttctc 5721018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 5741616 - 5741699
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaa-gcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||| ||||||||||||||||  | |||||||||||  |||||| ||| ||||||||| |||||||||||||||||    
T  5741616 ttttataagctatattagagaacttatgaaaatcagctgaaaaaatacttatg-aaattgtcataagttgttttcataagttctc 5741699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 251
Target Start/End: Original strand, 45975675 - 45975783
Alignment:
Q  144 tatttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    |||||||||||  |||| ||| |||||| |||||||||||| ||||| |||||||  ||||||||||| |||||||||| | ||| |||  |||||||||    
T  45975675 tatttttgtataagctacaagctgttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaataatgttatacactgttttca 45975774  T
Q  243 taagttctc 251  Q
    || ||||||    
T  45975775 tatgttctc 45975783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 6556958 - 6557065
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagc-ttatgaaaagtgtcataagctgttttcat 243  Q
    ||||||||| || ||||||||||||| ||||| ||| ||| |||||||||||   |||||| |||||| | || |||||| ||||||||||| |||||||    
T  6556958 tttttgtatatgttataagttgtttttataagttatattaaagaacttatgacaataagctaaaaaaaaccttttgaaaactgtcataagctattttcat 6557057  T
Q  244 aagttctc 251  Q
    ||||||||    
T  6557058 aagttctc 6557065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 27970378 - 27970271
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagag-aacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcat 243  Q
    ||||||||| |||||||||||||||  |||| |||| || | | ||||||||||  ||| |||||||||||||||||||| |||||||| | ||||| ||    
T  27970378 tttttgtatatgctataagttgtttccataaactatttttggggaacttatgaaaataaactgaaaaaagcttatgaaaaatgtcataaaccgtttttat 27970279  T
Q  244 aagttctc 251  Q
    ||||||||    
T  27970278 aagttctc 27970271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 10744300 - 10744393
Alignment:
Q  158 ctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||| |||||| ||||||| ||||||||||||||| ||  |||| |||||| |||||||||| | || ||||||||||||||| ||||||||    
T  10744300 ctataagctgttttcataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaaca-tgccataagctgttttcacaagttctc 10744393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 250
Target Start/End: Complemental strand, 37842427 - 37842334
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||||||||||| ||||||||||||  ||||||||| ||  |||||||||||  ||||||||| | |||||| || ||||||||||||||||    
T  37842427 gctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaaca-tgtcattagatgttttcataagttct 37842334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 41184690 - 41184628
Alignment:
Q  188 aacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||||||  |||| |||||||| |||||||||| ||||||||||| ||||||||||||||    
T  41184690 aacttatgaaaataagttgaaaaaaacttatgaaaattgtcataagctattttcataagttct 41184628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 27820253 - 27820169
Alignment:
Q  171 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaaaa 256  Q
    |||||||||||||| |||| |||||||  ||||||||||| |||||||||| | ||| ||||||| ||||||||| ||||| ||||    
T  27820253 tataagctatcttaaagaatttatgaaaataagctgaaaatagcttatgaacaatgtaataagct-ttttcataaattctccaaaa 27820169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 34290224 - 34290328
Alignment:
Q  147 ttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataa 245  Q
    ||||||||  |||||||| |||||| ||||||||||||  ||||||||||||  ||||||||||| | |||||||| | ||||||||||| |||| ||||    
T  34290224 ttttgtataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaata-tgtcataagcttttttaataa 34290322  T
Q  246 gttctc 251  Q
     |||||    
T  34290323 attctc 34290328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 43230843 - 43230749
Alignment:
Q  156 tgctataagttgtt-ttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||||| ||||| ||||| || ||||||| |||||  |||| |||||||||||||| |||| ||||  ||||||||||||||| |||||    
T  43230843 tgctataagttgttcttataggctatattggagaactaatgaaaataagttgaaaaaagcttataaaaactgtc--aagctgttttcataaattctc 43230749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 249
Target Start/End: Original strand, 14331970 - 14332072
Alignment:
Q  146 tttttgtatttgctataagttgttt-tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| |||||||||||||||  | | |||||||| ||| |||| |||| ||||||||||||||||| | | ||||||||||||  ||||||||||    
T  14331970 tttttgtatatgctataagttgtttccaaatgctatcttggaggactt-tgaaattaagctgaaaaaagctaacg-aaagtgtcataatttgttttcata 14332067  T
Q  245 agttc 249  Q
    |||||    
T  14332068 agttc 14332072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 251
Target Start/End: Complemental strand, 10199464 - 10199386
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||| ||||||| ||||||||  ||||||||||| | |||||||| | ||||||||||| ||||||| |||||||    
T  10199464 ataagctattttagagagcttatgaaaataagctgaaaacaacttatgaaca-tgtcataagctattttcatgagttctc 10199386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 27820397 - 27820330
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagct 235  Q
    |||||||||||||||| ||||| |||||||  ||||||||||| |||||||||| | |||| ||||||    
T  27820397 ttttataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtcgtaagct 27820330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 41195249 - 41195187
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagct 235  Q
    |||| ||||||| |||||||||||||  ||||||||||||||||||| |||| |||||||||||    
T  41195249 ataaactatcttggagaacttatgaaaataagctgaaaaaagcttattaaaa-tgtcataagct 41195187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 250
Target Start/End: Complemental strand, 3887692 - 3887610
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||| |||||| ||  |||||||||||||  |||| | |||| |||||||||| | ||||||||| ||||||||||||||||    
T  3887692 ttttacaagctagctaggagaacttatgaaaataagttaaaaacagcttatgaacaatgtcataagatgttttcataagttct 3887610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 251
Target Start/End: Original strand, 10280664 - 10280741
Alignment:
Q  173 taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||  ||||||||||||  |||||||| ||||||||||||| | ||  ||||| |||||||||||||||||    
T  10280664 taagctatcttcaagaacttatgaaaataagctgacaaaagcttatgaaca-tgaaataagttgttttcataagttctc 10280741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 246
Target Start/End: Original strand, 25479579 - 25479668
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataag 246  Q
    ||||||||||||||| |||||||||| |||||| ||||||||  ||||||||||| | || ||||| | |||||||| || ||||||||||    
T  25479579 gctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaaca-tgtcataatctattttcataag 25479668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 36872299 - 36872357
Alignment:
Q  192 tatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    |||||| ||||| ||||||||||||||||||| | | ||||||||||||||||| ||||    
T  36872299 tatgaaattaagttgaaaaaagcttatgaaaattataataagctgttttcataaattct 36872357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 51695551 - 51695473
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    |||||||||||| ||||| |||||||  ||||||||||| |||||||||| | ||| ||||| |||||  |||||||||    
T  51695551 ataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtgataagttgtttatataagttct 51695473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 33186318 - 33186399
Alignment:
Q  171 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatg-aaaagtgtcataagctgttttcataagttctc 251  Q
    ||||| |||| |||||||||||||  |  ||||||||||||||||| || |||| |||||||| | ||||||||||||||||    
T  33186318 tataatctatattagagaacttatataaataagctgaaaaaagcttttgaaaaattgtcataaccagttttcataagttctc 33186399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 256
Target Start/End: Original strand, 36872719 - 36872826
Alignment:
Q  146 tttttgtatttgctataagttg-ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| |||||||||||| ||||| ||||||| ||  ||||||||||||  |||| || ||||||||||| |||| ||||||||   |||||||||    
T  36872719 tttttgtatgtgctataagttgtttttacaagctatattgcagaacttatgaaaataagttg-aaaaagcttatcaaaattgtcataa---gttttcata 36872814  T
Q  245 agttctcgaaaa 256  Q
    | ||||| ||||    
T  36872815 aattctccaaaa 36872826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 37517189 - 37517144
Alignment:
Q  205 tgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    |||||||||||| |||||| ||||||||||||||||| ||||||||    
T  37517189 tgaaaaaagcttttgaaaattgtcataagctgttttcgtaagttct 37517144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 47432083 - 47432160
Alignment:
Q  146 tttttgtatttgctataagttgttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaa 223  Q
    |||||| || ||||||||| ||||||||||| ||| ||  |||| |||||||  ||||||||||||||||| ||||||    
T  47432083 tttttgaatatgctataaggtgttttataagttatattgaagaatttatgaaaataagctgaaaaaagcttgtgaaaa 47432160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 2777881 - 2777984
Alignment:
Q  148 tttgtatttgctataagttgtttta-taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataag 246  Q
    |||||||  |||||||| ||||||| |||| || ||| |||||||||||||  |||||||||||  ||||||||| |  |||||||| || |||||||||    
T  2777881 tttgtataagctataagctgttttaataagttaacttggagaacttatgaaaataagctgaaaacggcttatgaata-cgtcataagttggtttcataag 2777979  T
Q  247 ttctc 251  Q
    |||||    
T  2777980 ttctc 2777984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 256
Target Start/End: Complemental strand, 28689526 - 28689425
Alignment:
Q  157 gctataagttgtttt---ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcga 253  Q
    |||||||||||||||   |||||||||||| || | ||||||||  ||||||||||| | |||||| | | ||||||||||||||| | ||||||||| |    
T  28689526 gctataagttgttttcatataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggaca-tgtcataagctgtttccgtaagttctcta 28689428  T
Q  254 aaa 256  Q
    |||    
T  28689427 aaa 28689425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 36872458 - 36872518
Alignment:
Q  190 cttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||||| |||| | ||||||||||||||||| | ||||||||||| ||||||| ||||    
T  36872458 cttatgaatataagttaaaaaaagcttatgaaaattttcataagctgtattcataaattct 36872518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 12287275 - 12287169
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataag-ctgttttcat 243  Q
    ||||||||| ||||||||||||||||  ||||||||||||  |||||||  ||  ||||||||||| | |||||||||| || |||||| || ||||||     
T  12287275 tttttgtatatgctataagttgttttcttaagctatcttatggaacttacaaaaataagctgaaaacaacttatgaaaa-tgccataagactattttcac 12287177  T
Q  244 aagttctc 251  Q
    ||||||||    
T  12287176 aagttctc 12287169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 248
Target Start/End: Complemental strand, 44217194 - 44217151
Alignment:
Q  205 tgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||    
T  44217194 tgaaaaaagcttataaaaattgtgataagctgttttcataagtt 44217151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 49888765 - 49888824
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagct 215  Q
    ||||| ||||||||| ||||||||||||||||||||||||||  ||||| ||||| ||||    
T  49888765 gctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 49888824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 1510393 - 1510315
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaa 223  Q
    |||||||||  | ||||||||||||| ||||||| | || ||||||||| |||  |||| |||||||||||||||||||    
T  1510393 tttttgtataggttataagttgtttttataagctctattggagaacttacgaaaataagttgaaaaaagcttatgaaaa 1510315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 7941620 - 7941698
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||||| |  |||||||||||||  |||| |||||| |||||  ||| | ||||||||||||||||||||| ||||    
T  7941620 ataagctatttcggagaacttatgaaaataagttgaaaatagcttcggaacaatgtcataagctgttttcataaattct 7941698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 38001639 - 38001688
Alignment:
Q  201 aagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||| | |||||||| || ||||||||||||||||||||||||||    
T  38001639 aagctgaaaacaacttatgaacag-gtcataagctgttttcataagttctc 38001688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 1509738 - 1509843
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| ||  |||||||||||| ||||||| | || |||||||| || |  |||| |||||||||||||||| || |  |||||||||||| || |    
T  1509738 tttttgtatatgtaataagttgtttttataagctctgttggagaacttgtgtaaataagttgaaaaaagcttatgagaatttccataagctgtttccaaa 1509837  T
Q  245 agttct 250  Q
    ||||||    
T  1509838 agttct 1509843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 23902139 - 23902047
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttc 249  Q
    ||||||||||||||| | ||||||||||||||| |||||| |  ||||||||||| | |||||| | | ||  ||||||| |||||||||||||    
T  23902139 gctataagttgttttcaaaagctatcttagagagcttatggaagtaagctgaaaacaacttatgcaca-tgctataagctcttttcataagttc 23902047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 35925732 - 35925780
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttc 249  Q
    |||| |||||| |||||||||| | |||||||||||||||||||||||||    
T  35925732 taagttgaaaacagcttatgaaca-tgtcataagctgttttcataagttc 35925780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 38882981 - 38882889
Alignment:
Q  159 tataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||| ||||||| ||| ||||||||||||||  |||| |||||| | |||||||| | | | |||| |||||||||||| |||||    
T  38882981 tataagttgttttcataagctctct-agagaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 38882889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 341494 - 341534
Alignment:
Q  205 tgaaaaaagcttatgaaaagtgtcataagctgttttcataa 245  Q
    |||||||| |||||||||| ||||||||| |||||||||||    
T  341494 tgaaaaaaacttatgaaaattgtcataagttgttttcataa 341534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 27145777 - 27145714
Alignment:
Q  186 agaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||||||||  ||||||||||||| |||||||| | |||||||||  |||||| ||||||||    
T  27145777 agaacttatgaaaataagctgaaaaaa-cttatgaacaatgtcataagtcgttttcttaagttct 27145714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 41505745 - 41505777
Alignment:
Q  219 gaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||| |||||||||||||||||||||||||||    
T  41505745 gaaaattgtcataagctgttttcataagttctc 41505777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 42575492 - 42575452
Alignment:
Q  205 tgaaaaaagcttatgaaaagtgtcataagctgttttcataa 245  Q
    ||||||||||||||||||| ||||||||| |||||| ||||    
T  42575492 tgaaaaaagcttatgaaaactgtcataagttgtttttataa 42575452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 17822938 - 17822842
Alignment:
Q  156 tgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||||||| |||||||||||| |||||||||||||  |||||| ||||||||||||||||| |||||||||||||||||||| ||||||    
T  17822938 tgctataagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaaaaatgtcataagctgttttcatatgttctc 17822842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 21731739 - 21731633
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| |||||||||||||||| ||||||||| || ||||| |||||||  |||| ||||||||| ||||||||| ||| ||||||||||||||||    
T  21731739 tttttgtatgtgctataagttgtttttataagctatattggagaatttatgaaagtaagttgaaaaaagtttatgaaaattgtgataagctgttttcata 21731640  T
Q  245 agttctc 251  Q
    |||||||    
T  21731639 agttctc 21731633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 251
Target Start/End: Original strand, 22030188 - 22030296
Alignment:
Q  144 tatttttgtatttgctataagttgtt-ttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    ||||||||||| |||||||||||||| ||| ||| ||  ||||||||||||||||  ||| |||| |||||||| |||||| ||||||||||||||||||    
T  22030188 tatttttgtatatgctataagttgttcttacaagttaaattagagaacttatgaaaataacctgagaaaagcttttgaaaattgtcataagctgttttca 22030287  T
Q  243 taagttctc 251  Q
    |||||||||    
T  22030288 taagttctc 22030296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 50681172 - 50681066
Alignment:
Q  146 tttttgtatttgctataagttgttt-tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| ||||||||||||||| |||||||||| || ||||| |||||||  |||  ||||||||||||||||||| |||||| | |||||||||||    
T  50681172 tttttgtatatgctataagttgtttatataagctatattggagaaattatgaaaataaattgaaaaaagcttatgaaaattgtcattaactgttttcata 50681073  T
Q  245 agttctc 251  Q
    |||||||    
T  50681072 agttctc 50681066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 146 - 242
Target Start/End: Complemental strand, 55414503 - 55414406
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    |||||| || |||||||| ||||||| ||||| |||||| |||||||||||||  |||| ||||||||||||||||||| ||||||||||||||||||    
T  55414503 tttttgcatatgctataaattgttttcataagttatcttggagaacttatgaaaataagttgaaaaaagcttatgaaaaatgtcataagctgttttca 55414406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 13126630 - 13126554
Alignment:
Q  174 aagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||| || |||||||||||||||| |||||||||    
T  13126630 aagctatcttcgagaacttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgtttttataagttct 13126554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 29657393 - 29657477
Alignment:
Q  167 gttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||| ||||||| |||||||| ||||||| ||||||| ||||| |||| |||||| |||||||||||||||||||||||||||    
T  29657393 gttttacaagctatattagagaagttatgaaattaagctcaaaaatgcttttgaaaattgtcataagctgttttcataagttctc 29657477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 30668426 - 30668339
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaaaa 256  Q
    |||||||||||||||| || |  ||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||    
T  30668426 ttttataagctatcttggatagtttatgaaattaagctgaaaaa-gcttatgaaaagtgtcataagctgttttcacaagttctccaaaa 30668339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 149 - 251
Target Start/End: Complemental strand, 50662818 - 50662715
Alignment:
Q  149 ttgtatttgctataagttgttt-tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagt 247  Q
    |||||| ||||||||||||||| |||||||||| || ||||| || ||||  |||| ||||||||||||||||||| |||||| | ||||||||||||||    
T  50662818 ttgtatatgctataagttgtttatataagctatattggagaaattgtgaaaataagttgaaaaaagcttatgaaaattgtcattaactgttttcataagt 50662719  T
Q  248 tctc 251  Q
    ||||    
T  50662718 tctc 50662715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 54426043 - 54426136
Alignment:
Q  159 tataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||| |||| |||| || |||||||||||||  |||  ||||||||||||||||||| ||||||||||||||||| |||||||||    
T  54426043 tataagttgtttttataatctatattggagaacttatgaaaataacttgaaaaaagcttatgaaaattgtcataagctgttttcctaagttctc 54426136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 2244035 - 2244133
Alignment:
Q  146 tttttgtatt-tgctataagttgtttta---taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtttt 240  Q
    |||||||||| |||||||||||||||||   |||||||| || |||||||||||||  |||| ||||||||| ||||||| | ||||||||||||||||    
T  2244035 tttttgtattatgctataagttgttttaatataagctatattggagaacttatgaaaataaggtgaaaaaagtttatgaatattgtcataagctgtttt 2244133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 245
Target Start/End: Complemental strand, 7839444 - 7839344
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| |||||||| ||||||| ||||||||  ||  |||||||| |||  |||| ||||||||||||||||||| ||||||||| ||||||||||    
T  7839444 tttttgtatatgctataaattgtttttataagctagattgaagaacttacgaaaataagttgaaaaaagcttatgaaaattgtcataagttgttttcata 7839345  T
Q  245 a 245  Q
    |    
T  7839344 a 7839344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 25904280 - 25904200
Alignment:
Q  171 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||| | || |||||||||| ||  |||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  25904280 tataagctgttttggagaacttataaaaataagctgaaaaaagcttatgaaaaatggcataagctgttttcataagctctc 25904200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 30668585 - 30668518
Alignment:
Q  4 atgagttgaatatggtggatactcttggtcacgctgatttttagtggtgaggtaaatttagataaactg 72  Q
    |||||||||||||||||||||||| |||||||||||| |||  | ||||||||||||||||||||||||    
T  30668585 atgagttgaatatggtggatactcctggtcacgctga-tttcggcggtgaggtaaatttagataaactg 30668518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 248
Target Start/End: Original strand, 55302238 - 55302339
Alignment:
Q  148 tttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataag 246  Q
    ||||||| | ||||||| |||| | ||||||||| || || ||||||||||  |||||||||||||||||| ||||| |||||||||||||||  |||||    
T  55302238 tttgtatatactataagctgttatcataagctatgttggaaaacttatgaaaataagctgaaaaaagcttacgaaaattgtcataagctgtttctataag 55302337  T
Q  247 tt 248  Q
    ||    
T  55302338 tt 55302339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 26924 - 26841
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcg 252  Q
    ||||||||||||| || |||||||||||||  ||| |||||||| |||| |||||  ||||||||||||||||||||| ||||||    
T  26924 ttttataagctatattggagaacttatgaaaataatctgaaaaa-gcttgtgaaatttgtcataagctgttttcataatttctcg 26841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 41512648 - 41512744
Alignment:
Q  156 tgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||||||| ||||||| |||   ||||||||||||  |||| ||| ||||||||||||||||||| ||||||||| ||  |||||||||    
T  41512648 tgctataagttgttttcataagctttctggaagaacttatgaaaataagatgataaaagcttatgaaaagtgttataagctgtatttgtaagttctc 41512744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 250
Target Start/End: Complemental strand, 46588158 - 46588051
Alignment:
Q  145 atttttgtatttgctataagttgtttt--ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    |||||| ||| ||||||||||||||||  ||||| ||| || |||||||||||||  |||| || |||| ||||||||||| ||||||||| | |||||     
T  46588158 atttttatatatgctataagttgttttttataagttatattggagaacttatgaaaataagttggaaaaggcttatgaaaattgtcataagttattttcg 46588059  T
Q  243 taagttct 250  Q
    ||||||||    
T  46588058 taagttct 46588051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 251
Target Start/End: Complemental strand, 35571703 - 35571608
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||| |||||| ||||||||||||||||||||| ||||  |||| |||||  |||| ||||| ||||| |||||||||||| | ||||||||    
T  35571703 gctataagctgttttcataagctatcttagagaacttgtgaaaataagttgaaaccagctcatgaacagtgtaataagctgtttttaaaagttctc 35571608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 39603230 - 39603147
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||| ||| || |||||||||||||  |||  | |||||||||||| |||| ||||||||||||||||| |||||||||    
T  39603230 ttttataaggtatattggagaacttatgaaaataacttaaaaaaagcttataaaaattgtcataagctgttttcctaagttctc 39603147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 248
Target Start/End: Complemental strand, 53294197 - 53294094
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| |||||||||||||||| |||| |||| ||||||||||||||||   |||||||||| ||||| ||||||   ||||||  |||||||||     
T  53294197 tttttgtatatgctataagttgtttttataaactatattagagaacttatgaaaacaagctgaaaatagcttttgaaaaccatcataatttgttttcatg 53294098  T
Q  245 agtt 248  Q
    ||||    
T  53294097 agtt 53294094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 41336802 - 41336852
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    |||| ||||||||||||||||||| ||||||||||||||||| ||||||||    
T  41336802 taagttgaaaaaagcttatgaaaactgtcataagctgttttcttaagttct 41336852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 2996573 - 2996665
Alignment:
Q  159 tataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||| |||||||||||| |||| | ||||||  |||| ||||||||||||||| | | ||||||||| |||||||||||| ||||    
T  2996573 tataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggaca-tgtcataagttgttttcataagctctc 2996665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 251
Target Start/End: Original strand, 24169279 - 24169356
Alignment:
Q  174 aagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||| |||| ||||||||  |||| |||||||| |||||||||| ||||||||||| |||| | ||||||||    
T  24169279 aagctatcttggagagcttatgaaaataagttgaaaaaatcttatgaaaaatgtcataagctatttttaaaagttctc 24169356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 55064855 - 55064928
Alignment:
Q  178 tatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||| |||||||||||||  |||| |||||||||||  |||||| ||||||||| |||||||| ||||||||    
T  55064855 tatcttggagaacttatgaaaataagatgaaaaaagctattgaaaaatgtcataagttgttttcaaaagttctc 55064928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 37864022 - 37863932
Alignment:
Q  159 tataagttgttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||| ||||| |||||||||||| | ||  ||||||||| ||| |||||| | ||||||||  ||||||||||||||||||||||||||||    
T  37864022 tataagctgtttcataagctatcttggtgaggttatgaatt-aaggtgaaaacaacttatgaac-gtgtcataagctgttttcataagttctc 37863932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 20109611 - 20109678
Alignment:
Q  184 agagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||| ||  | ||| ||||||| |||||||||| |||||||||||||||||| ||||||||    
T  20109611 agagaacttataaaaatcagcagaaaaaaacttatgaaaaatgtcataagctgttttcaaaagttctc 20109678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 1407970 - 1408040
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaa-agcttatgaaaagtgtcataagctgttttc 241  Q
    |||||||||||  || || |||||||  |||||||||||| |||||||||||| |||||||||||||||||    
T  1407970 ataagctatctaggaaaatttatgaagataagctgaaaaacagcttatgaaaaatgtcataagctgttttc 1408040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 49939979 - 49939929
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||||||| |||||||||| | ||||||||||| ||||||||||||||    
T  49939979 taagctgaaaacagcttatgaacaatgtcataagctcttttcataagttct 49939929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 16200064 - 16199991
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttat 218  Q
    ||||||||| ||||||||| |||||| |||||||||||| ||| |||||||||  |||||| ||||| ||||||    
T  16200064 tttttgtatatgctataagctgttttcataagctatcttggaggacttatgaaaataagctaaaaaaggcttat 16199991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 21523585 - 21523649
Alignment:
Q  185 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||| |||||||  ||||||||||| |||||||||||| ||||||||| ||||||||||| ||||    
T  21523585 gagaagttatgaaaataagctgaaaa-agcttatgaaaaatgtcataagttgttttcataaattct 21523649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 256
Target Start/End: Complemental strand, 1203188 - 1203088
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaaa 255  Q
    |||||||||||| || ||||| |||||| |||||||||| ||  |||||| |||| || ||| | ||| | ||||||||||||||| ||||||||| |||    
T  1203188 gctataagttgtcttcataagttatcttggagaacttattaaaataagctaaaaacagtttacggaaaatatcataagctgttttcgtaagttctctaaa 1203089  T
Q  256 a 256  Q
    |    
T  1203088 a 1203088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 25332784 - 25332868
Alignment:
Q  168 ttttataagctatcttag-agaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||||||||  ||||||||||||  ||||||||||| | |||||||| | || |||||| |||||||  ||||||||    
T  25332784 ttttataagctatcttatcagaacttatgaaaataagctgaaaacaacttatgaataatgccataagttgttttcgcaagttctc 25332868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 239
Target Start/End: Complemental strand, 40831106 - 40831019
Alignment:
Q  152 tatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttt 239  Q
    ||||||| |||||||||||| ||||||||  || ||||||||||||| | ||| |||||||||||||| |||  |||| ||||||||||    
T  40831106 tatttgcaataagttgtttttataagctagattggagaacttatgaaat-aagttgaaaaaagcttataaaagttgtcgtaagctgttt 40831019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 43886159 - 43886112
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    ||||||||||| |||||||||||| || |||||||||||||||||||||    
T  43886159 taagctgaaaatagcttatgaaaa-tgccataagctgttttcataagtt 43886112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 56249566 - 56249613
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    |||| ||||||||||||||||||| |||||||||||||||| |||||||    
T  56249566 taagttgaaaaaagcttatgaaaa-tgtcataagctgttttgataagtt 56249613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 251
Target Start/End: Original strand, 1706620 - 1706715
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||| |||||| |||| ||||||| || | ||||||||  |||| || ||| |||||||||| | || |||||||||||||||||| |||||    
T  1706620 gctataagctgttttcataaactatcttggacagcttatgaaaataagttggaaatagcttatgaacaatgccataagctgttttcataatttctc 1706715  T

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Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 242
Target Start/End: Complemental strand, 3070003 - 3069960
Alignment:
Q  199 ttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||    
T  3070003 ttaagttgaaaaaagcttatgaaaaatgtcataagatgttttca 3069960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 28614864 - 28614817
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatg 219  Q
    |||||||||| |||||||||||||||  ||||||||||| ||||||||    
T  28614864 ataagctatcctagagaacttatgaaaataagctgaaaagagcttatg 28614817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 20108996 - 20109102
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| || |||||| |||||| ||||| ||| ||||||||||| ||||  | ||  ||||||||||| |||||  | ||| ||| ||||||||||    
T  20108996 tttttgtatatggtataagctgtttttataagatatattagagaacttttgaaaatgagtcgaaaaaagcttgtgaaatttttcacaaggtgttttcata 20109095  T
Q  245 agttctc 251  Q
    |||||||    
T  20109096 agttctc 20109102  T

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Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 250
Target Start/End: Complemental strand, 46592269 - 46592187
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||||| ||| || |||||||||||||  |||| || |||| ||||||||||| ||||||||| | ||||  ||||||||    
T  46592269 ttttataagttatattggagaacttatgaaaataagttggaaaaggcttatgaaaattgtcataagttatttttgtaagttct 46592187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 29912936 - 29913040
Alignment:
Q  147 ttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataa 245  Q
    |||||||| || || |||| ||||| |||||||||||| || ||||||| ||  ||||||||||| | || | ||||| ||||| ||||| |||||||||    
T  29912936 ttttgtatatgttaaaagtcgttttcataagctatcttggacaacttataaaaataagctgaaaagaactaaggaaaaatgtca-aagctattttcataa 29913034  T
Q  246 gttctc 251  Q
    ||||||    
T  29913035 gttctc 29913040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 49003912 - 49003859
Alignment:
Q  191 ttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||| |||||||| |||||||||||||| | ||||||| ||| ||||||||    
T  49003912 ttatgaaattaagctggaaaaagcttatgaacaatgtcatacgctcttttcata 49003859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 242
Target Start/End: Complemental strand, 54069500 - 54069403
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    ||||||||| |||||||| ||||||| ||||| ||| ||  ||||| ||||||  |||| | |||| |||||||||||| |||  |||||||||||||    
T  54069500 tttttgtatatgctataatttgtttttataagttatattgaagaacatatgaaaataagttaaaaacagcttatgaaaattgttgtaagctgttttca 54069403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 55084549 - 55084488
Alignment:
Q  161 taagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaa 221  Q
    ||||||||||| || |||||||||||||| ||||||||  ||||||||||  ||||||||||    
T  55084549 taagttgttttcatgagctatcttagagagcttatgaaaataagctgaaaccagcttatgaa 55084488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 15173326 - 15173286
Alignment:
Q  205 tgaaaaaagcttatgaaaagtgtcataagctgttttcataa 245  Q
    |||||||| |||||||||| ||||||||||| |||||||||    
T  15173326 tgaaaaaaacttatgaaaattgtcataagctattttcataa 15173286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 20031763 - 20031831
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaa-agcttatgaaaagtgtcataagctgttt 239  Q
    ||||||||| ||||||||||||||||  | |||||||||| ||||||| || | || ||||||||||||    
T  20031763 ataagctattttagagaacttatgaaaatgagctgaaaaacagcttatcaacaatgccataagctgttt 20031831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 251
Target Start/End: Original strand, 28615332 - 28615427
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaa-agcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||||| |||||||||  |  ||| ||||||||  |||||  ||||| | |||||||||| |||||| ||||||||||||||||||||    
T  28615332 gctataagttgttttcataagctataatgaagagcttatgaaaataagccaaaaaacaacttatgaaaa-tgtcattagctgttttcataagttctc 28615427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 256
Target Start/End: Complemental strand, 42641711 - 42641612
Alignment:
Q  159 tataagttgtttt-ataagctatcttagagaacttatgaatt-taagctgaaaaa-agcttatgaaaagtgtcataagctgttttcataagttctcgaaa 255  Q
    ||||||||||||| ||||||||| || | || |||||||| | ||||||| |||| ||||| |||| | ||||||||| |||||||||||||||| ||||    
T  42641711 tataagttgttttcataagctattttggtgagcttatgaaatataagctgcaaaacagcttgtgaaca-tgtcataaggtgttttcataagttcttgaaa 42641613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 41851522 - 41851628
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| |||||||||||||||| | |||||||||| ||||| ||||||| ||||||||| ||||||||||||||||||||||||| ||||| ||||    
T  41851522 tttttgtatatgctataagttgttttcagaagctatcttggagaatttatgaaattaagctgagaaaagcttatgaaaagtgtcataagttgtttccata 41851621  T
Q  245 agttctc 251  Q
    | |||||    
T  41851622 aattctc 41851628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 43279602 - 43279506
Alignment:
Q  156 tgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||||||| ||||||||| || |||||||| ||||  |||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  43279602 tgctataagttgtttttataagctatattggagaacttgtgaaaataagttgaaaaaagcttatgaaaattgtcataagctgttttcataaattctc 43279506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 15757741 - 15757635
Alignment:
Q  146 tttttgtatttgctataagttgt-tttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| ||||||||||||| ||||||||||||   ||||||| ||||||  ||||||||||||||||| |||||| |||||||||| |||||||||    
T  15757741 tttttgtatatgctataagttgtatttataagctatacaagagaacgtatgaaaataagctgaaaaaagcttctgaaaattgtcataagcagttttcata 15757642  T
Q  245 agttctc 251  Q
    | |||||    
T  15757641 aattctc 15757635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 251
Target Start/End: Original strand, 45229525 - 45229604
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||| |||||||||||||  |||||||||||||||| ||||||| ||||||||| | |||||||||||||||    
T  45229525 ataagctatcttcgagaacttatgaaaataagctgaaaaaagctaatgaaaaatgtcataaggtcttttcataagttctc 45229604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 32592574 - 32592679
Alignment:
Q  147 ttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataa 245  Q
    ||||||||  ||||||||||||||| |||||| || || |||||||||||||  |||| ||| ||||||||||||||| |||| |||||| |||||||||    
T  32592574 ttttgtatacgctataagttgtttttataagcaatattggagaacttatgaaaataagttgagaaaagcttatgaaaattgtcgtaagctattttcataa 32592673  T
Q  246 gttctc 251  Q
    ||||||    
T  32592674 gttctc 32592679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 41812173 - 41812069
Alignment:
Q  146 tttttgtatttgctataagttgttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataa 245  Q
    ||||||||| ||||| ||| ||||| | |||||||||| || |||||| ||| | ||| ||||||||||||||||||| |||||||||||||||||| ||    
T  41812173 tttttgtatatgctacaagatgtttcaaaagctatcttggaaaacttaggaaat-aagttgaaaaaagcttatgaaaaatgtcataagctgttttcaaaa 41812075  T
Q  246 gttctc 251  Q
    ||||||    
T  41812074 gttctc 41812069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 33981140 - 33981212
Alignment:
Q  176 gctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    |||||||| ||||| ||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||||    
T  33981140 gctatcttggagaatttatgaaattaagttgaaaaaagcttatgaaatgtgtcataagccgttttcataagtt 33981212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 250
Target Start/End: Original strand, 26202025 - 26202120
Alignment:
Q  156 tgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    |||||||||||||||| ||||| ||| || |||||||||||||  |||| ||||||||||||||||||| ||||||||| |||| |||||| ||||    
T  26202025 tgctataagttgtttttataagatatattggagaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataagttgttctcataaattct 26202120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 20952342 - 20952448
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||| ||| |||||||||||||||| || |||||| || |||||||||||||  |||| ||||||||| | ||||||| || ||||| |||||||||||    
T  20952342 tttttttatatgctataagttgtttttattagctatattggagaacttatgaaaataagttgaaaaaagttaatgaaaattggcataaactgttttcata 20952441  T
Q  245 agttctc 251  Q
    |||||||    
T  20952442 agttctc 20952448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 18066126 - 18066218
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    |||||||| |||||| |||||||||||| ||||||||| |||  |||| |||||| |||||||||  | ||||||||||||||||||||||||    
T  18066126 gctataagctgttttcataagctatcttggagaacttaagaaaataaggtgaaaatagcttatgagcaatgtcataagctgttttcataagtt 18066218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 39659569 - 39659486
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||| ||||||||||||||||  |||| ||| |||||||||  |||  ||||||||||||||||| |||||||||    
T  39659569 ttttataagctatattagagaacttatgaagataaggtgacaaaagcttagaaaatttgtcataagctgttttcgtaagttctc 39659486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 251
Target Start/End: Complemental strand, 41293219 - 41293140
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||| | ||| |||||||||| ||||||||||| ||||||||  || |||||||||||||||| ||||||||||    
T  41293219 ataagctatcctggagtacttatgaatataagctgaaaacagcttatgcgaaatgtcataagctgtttttataagttctc 41293140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 250
Target Start/End: Original strand, 750669 - 750762
Alignment:
Q  157 gctataagttgttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||| || ||||| |||||||||||| ||||||||||| |  |||||| |||| |||||||||| | |||||| |||| ||||||||||||||    
T  750669 gctatgagctgtttcataagctatcttggagaacttatgcaaataagctcaaaacagcttatgaacaatgtcattagctcttttcataagttct 750762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 1625900 - 1625993
Alignment:
Q  159 tataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||| |||||||||||| ||||||||| |||  | ||||||||| | |||||||| | |||||||||||  ||||||||||||||    
T  1625900 tataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacattgtcataagctactttcataagttctc 1625993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 250
Target Start/End: Complemental strand, 5745868 - 5745763
Alignment:
Q  146 tttttgtatttgctataagttgttt-tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||| ||| ||||||||||| ||| |||||||||| || ||| ||||| |||  | || || |||||||||||||||| ||||||||||||||||||||    
T  5745868 tttttttatatgctataagttatttctataagctatatttgaggacttaggaaaattagttggaaaaagcttatgaaaattgtcataagctgttttcata 5745769  T
Q  245 agttct 250  Q
    | ||||    
T  5745768 aattct 5745763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 9174808 - 9174897
Alignment:
Q  152 tatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtttt 240  Q
    ||||| ||||||| |||||| ||||||||||||| ||| ||||||||  ||||||||||| |||||||||| | ||||||||| ||||||    
T  9174808 tatttactataagctgttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatgaacaatgtcataagttgtttt 9174897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 20926516 - 20926595
Alignment:
Q  171 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||| ||||||||||||||||  |||| ||||||||||| ||||||| |||||||| ||  ||||||||||||||    
T  20926516 tataagctatattagagaacttatgaaaataagttgaaaaaagctaatgaaaattgtcataaact-atttcataagttctc 20926595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 12464556 - 12464461
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtttt 240  Q
    ||||||||| ||||||||| | |||| |||||||||||| |||||||| ||||  ||||||||||||||||| |||||  |||| |||||| ||||    
T  12464556 tttttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaataagctgaaaaaagcttgtgaaatatgtcgtaagctttttt 12464461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 13325596 - 13325663
Alignment:
Q  184 agagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||||  | ||||||||||||||||||  || |||||||||||||||||| ||||||||    
T  13325596 agagaacttatgaaaatgagctgaaaaaagcttatgtgaaatgtcataagctgttttcaaaagttctc 13325663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 250
Target Start/End: Complemental strand, 7035627 - 7035545
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    |||||||| ||||||| || ||||||||||  ||||| ||||| | ||||||||  |||||||||||||||| ||||||||||    
T  7035627 ttttataaactatcttggaaaacttatgaaaataagcggaaaacaccttatgaactgtgtcataagctgtttccataagttct 7035545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 251
Target Start/End: Original strand, 16451133 - 16451211
Alignment:
Q  173 taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||| |||||||  ||||  ||||||||||| |||| ||||| | ||||||||| |||||||||||||||||    
T  16451133 taagctatcttggagaactcgtgaaaataagctgaaaacagctcatgaacaatgtcataagttgttttcataagttctc 16451211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 250
Target Start/End: Complemental strand, 41241215 - 41241111
Alignment:
Q  146 tttttgtatttgctataagttgtttta-taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| |||||||||| |||||  |||| |||||| || ||||| |||| ||||||||||||||||||||| |||| || ||||  |||||||| |    
T  41241215 tttttgtatatgctataagtagttttcctaagttatcttggaaaacttgtgaaattaagctgaaaaaagcttatggaaag-gttataatttgttttcaca 41241117  T
Q  245 agttct 250  Q
    ||||||    
T  41241116 agttct 41241111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 41407289 - 41407394
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| ||||||||||| |||| ||||| | |||| |||||||| ||||  ||| || ||| ||||||||||||| || ||||||| ||||| |||    
T  41407289 tttttgtatatgctataagttatttttataagttttctttgagaacttgtgaaaataaccttaaacaagcttatgaaaaatgccataagccgttttaata 41407388  T
Q  245 agttct 250  Q
    ||||||    
T  41407389 agttct 41407394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 43570446 - 43570506
Alignment:
Q  190 cttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||  |||||| ||||||||||||||| | |||||||||||||||||||||||||||    
T  43570446 cttatgaaaataagct-aaaaaagcttatgaacaatgtcataagctgttttcataagttctc 43570506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 40279197 - 40279285
Alignment:
Q  159 tataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataag 246  Q
    ||||||||||||| ||||||||| || |||||||||||||  | ||||||||| || ||||||| | || |||||| ||||||||||||    
T  40279197 tataagttgttttcataagctatgttggagaacttatgaaaattagctgaaaatagtttatgaacaatgccataagttgttttcataag 40279285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 1647249 - 1647327
Alignment:
Q  171 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||||||  |||||| |||||| |  ||||||||||| |||||||||  | ||||||||||||||||||||||||||    
T  1647249 tataagctattatagagagcttatggaaataagctgaaaacagcttatgagca-tgtcataagctgttttcataagttct 1647327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 251
Target Start/End: Original strand, 4606939 - 4607018
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||| |||||||||||||  |||||| |||  |||| ||||| | ||||||||| |||||||| ||||||||    
T  4606939 ataagctatcttggagaacttatgaaaataagctaaaagcagctcatgaacaatgtcataagttgttttcacaagttctc 4607018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 250
Target Start/End: Complemental strand, 7928351 - 7928276
Alignment:
Q  176 gctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgt-cataagctgttttcataagttct 250  Q
    |||||||| |||||||||||||  ||||||||||| | |||||||| | ||| ||||||||||||||| |||||||    
T  7928351 gctatcttggagaacttatgaaaataagctgaaaacaacttatgaacaatgtccataagctgttttcaaaagttct 7928276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 23974547 - 23974465
Alignment:
Q  173 taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaaaa 256  Q
    |||||||| || |||||||||||||  | |||  |||||| ||| |||||| ||||||||||||||||||||||||||| ||||    
T  23974547 taagctatatttgagaacttatgaaaatgagccaaaaaaa-cttgtgaaaattgtcataagctgttttcataagttctccaaaa 23974465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 251
Target Start/End: Original strand, 26626887 - 26626966
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||  ||||||||||||  ||| ||||||| || ||||||| | ||||||||||| ||||| |||||||||    
T  26626887 ataagctatcttgcagaacttatgaaaataacctgaaaacagattatgaacaatgtcataagctattttcgtaagttctc 26626966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 33192211 - 33192293
Alignment:
Q  167 gttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    |||| |||||||||| | |||| ||||| ||| ||||||||||| |||||||| | | |||||||| |||||||||||||||||    
T  33192211 gtttcataagctatcctggagagcttataaatataagctgaaaacagcttatggata-tgtcataaactgttttcataagttct 33192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 235
Target Start/End: Complemental strand, 33319895 - 33319807
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagct 235  Q
    ||||||||| | ||||||  |||||| |||| ||||||| |||||||||||||  ||||||||||||||||||| |||  |||||||||||    
T  33319895 tttttgtatatactataaactgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttattaaa--tgtcataagct 33319807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 40279268 - 40279355
Alignment:
Q  160 ataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataag 246  Q
    |||||||||||| ||||||||| || |||||||||||||  | ||||||||| || ||||||| | || |||||| ||||||||||||    
T  40279268 ataagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttatgaacaatgccataagttgttttcataag 40279355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 40279338 - 40279425
Alignment:
Q  160 ataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataag 246  Q
    |||||||||||| ||||||||| || |||||||||||||  | ||||||||| || ||||||| | || |||||| ||||||||||||    
T  40279338 ataagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttatgaacaatgccataagttgttttcataag 40279425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 12289797 - 12289879
Alignment:
Q  159 tataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtttt 240  Q
    ||||||||||||| ||||  ||| || |||||||||||||  |||| ||||||||||||||||| | |||||||| |||||||    
T  12289797 tataagttgtttttataatttatattggagaacttatgaaaataagttgaaaaaagcttatgaatattgtcataaactgtttt 12289879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 2227194 - 2227259
Alignment:
Q  186 agaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||| |||  |||||||||||| | ||||||||| ||||||||||||||||  |||||||||    
T  2227194 agaacttacgaaaataagctgaaaaatgtttatgaaaaatgtcataagctgtttttttaagttctc 2227259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 28677729 - 28677637
Alignment:
Q  159 tataagttgt-tttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||| ||| |||| ||| || |||| |||||| |  ||||| ||||| | |||||||||| |||||||||||||||||||||||||||    
T  28677729 tataagttgtctttgtaagttattttggagagcttatggaaataagccgaaaacaacttatgaaaa-tgtcataagctgttttcataagttctc 28677637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 12194939 - 12195035
Alignment:
Q  146 tttttgtatttgctataagttgttt-tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcat-aagctgtttt 240  Q
    |||| |||| || |||| ||||||| |||||| ||| || |||||||| ||||  |||| ||||||||||||||||||| |||||| ||||||||||    
T  12194939 ttttggtatatgttataggttgtttatataagttatattggagaacttgtgaaaataagttgaaaaaagcttatgaaaattgtcataaagctgtttt 12195035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 38916330 - 38916286
Alignment:
Q  207 aaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||||||||||| | |||||| |||||||||||||||    
T  38916330 aaaaaagcttatgaaaagtggcgtaagcttttttcataagttctc 38916286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 247
Target Start/End: Original strand, 449877 - 449936
Alignment:
Q  188 aacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagt 247  Q
    ||||||| || ||||| | |||| |||||||||||| |||||||||||||||||| ||||    
T  449877 aacttatcaaattaagttaaaaatagcttatgaaaaatgtcataagctgttttcaaaagt 449936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 787374 - 787424
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||| |||||||| | | |||||||||||||||||||||||||||    
T  787374 taagctgaaaacagcttatggaca-tgtcataagctgttttcataagttctc 787424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 251
Target Start/End: Original strand, 8017448 - 8017526
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||| |||||||||||||  || || ||||| |  ||||||| | | |||||||||||||||||||||||||    
T  8017448 ataagctatcttggagaacttatgaaaatacgcagaaaacaaattatgaaca-tatcataagctgttttcataagttctc 8017526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 29316846 - 29316764
Alignment:
Q  158 ctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtttt 240  Q
    ||||||| |||||| || ||||||||| ||||||||||| |  ||||||||||| | |||||||| | ||||||||||||||||    
T  29316846 ctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaaca-tgtcataagctgtttt 29316764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 31561809 - 31561722
Alignment:
Q  162 aagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    |||||||||| ||||  |||||| |||||||||||||  |||||| ||| || ||||||||||  |||||| |||||||||| |||||    
T  31561809 aagttgttttcataacttatcttggagaacttatgaaagtaagcttaaacaatcttatgaaaaacgtcatatgctgttttcaaaagtt 31561722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 33503049 - 33503099
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||| |||||||||||| |||||||||||| |||||||| |||||    
T  33503049 taagctgaaaatagcttatgaaaa-tgtcataagctgatttcataaattctc 33503099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 251
Target Start/End: Complemental strand, 35379072 - 35378994
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||| |||| ||||||||  ||||||||||| | |||||||| |  ||||| ||||||||||||||| ||||    
T  35379072 ataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaaca-agtcatcagctgttttcataagctctc 35378994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 244
Target Start/End: Original strand, 36125372 - 36125447
Alignment:
Q  169 tttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    |||||||||||  || |||||||||||||  |||| | ||||||||||| ||||| ||  ||||||||||||||||    
T  36125372 tttataagctaaattggagaacttatgaaaataagttaaaaaaagcttacgaaaattgcaataagctgttttcata 36125447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 3611242 - 3611308
Alignment:
Q  174 aagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtttt 240  Q
    |||||||||| |||||||||||||  |||||| |||| || ||||||| | ||||||||| ||||||    
T  3611242 aagctatcttggagaacttatgaaaataagctaaaaacagtttatgaataatgtcataagttgtttt 3611308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 10619279 - 10619197
Alignment:
Q  169 tttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||  || ||| |||||||||  |||||||||||| |||   ||||| || |||||||||||||||| |||||||    
T  10619279 tttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctc 10619197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 36043924 - 36043994
Alignment:
Q  178 tatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    |||||| |||| |||||||| || |||| |||| |||||||||| | |||| |||| ||||||||||||||    
T  36043924 tatcttggagagcttatgaaattgagctaaaaacagcttatgaacaatgtcgtaagttgttttcataagtt 36043994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 40158719 - 40158808
Alignment:
Q  160 ataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttc 249  Q
    |||||||||||| ||||| |||  | |||| |||||| | |||||||||||| | ||||| || | |||||||||||||||||||||||||    
T  40158719 ataagttgttttcataagttattctggagagcttatgtaattaagctgaaaacaacttataaaca-tgtcataagctgttttcataagttc 40158808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 42420246 - 42420200
Alignment:
Q  205 tgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||| ||||||| ||||||||| ||||||| |||||||||    
T  42420246 tgaaaaaagctaatgaaaattgtcataagttgttttcgtaagttctc 42420200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 680517 - 680589
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataa 245  Q
    ||||||||||||  ||||||| ||||  ||||||||||| || |||| || | |||||||||||||||||||||    
T  680517 ataagctatcttgaagaacttgtgaaaataagctgaaaacagtttataaaca-tgtcataagctgttttcataa 680589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 251
Target Start/End: Original strand, 2142638 - 2142747
Alignment:
Q  144 tatttttgtatttgctataagttgtttt-ataagctatcttag-agaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttc 241  Q
    |||||||||||  ||||||||||||||| ||||  |||||| | |||| |||||||  |||||| |||| |||| ||||| | ||||| ||  |||||||    
T  2142638 tatttttgtataagctataagttgttttcataatttatcttgggagaatttatgaaaataagctaaaaacagctaatgaacattgtcacaacttgttttc 2142737  T
Q  242 ataagttctc 251  Q
    ||||||||||    
T  2142738 ataagttctc 2142747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 5902576 - 5902528
Alignment:
Q  201 aagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    |||||||||| || ||||||| | ||||||||||||||||||||||||||    
T  5902576 aagctgaaaacagtttatgaaca-tgtcataagctgttttcataagttct 5902528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 12795782 - 12795855
Alignment:
Q  149 ttgtatttgctataagttgttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaa 222  Q
    |||||| ||||||||| |||||| |||||||| || | || |||||| |  ||||| |||||||||||||||||    
T  12795782 ttgtatatgctataagctgttttttaagctatattggtgagcttatgcaagtaagccgaaaaaagcttatgaaa 12795855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 15305701 - 15305766
Alignment:
Q  185 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    |||||||||||||  |||| |||||||| |||||||||| || |||||| |||| ||| |||||||    
T  15305701 gagaacttatgaaaataagttgaaaaaaacttatgaaaattgccataagttgttgtcaaaagttct 15305766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 20933787 - 20933824
Alignment:
Q  214 cttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  20933787 cttatgaaaattgtcataaactgttttcataagttctc 20933824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 23956099 - 23956038
Alignment:
Q  161 taagttgttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaa 222  Q
    |||||||||||||||||| | ||  |||| |||||||  |||| ||||||||||||||||||    
T  23956099 taagttgttttataagctgtattgaagaatttatgaaaataagttgaaaaaagcttatgaaa 23956038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 42457962 - 42458035
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataa 245  Q
    ||||||||||||||||||| ||||||  ||||||||||| | |||||  ||| |||  |||| |||||||||||    
T  42457962 ataagctatcttagagaacatatgaaaataagctgaaaacaacttattgaaaatgttttaagttgttttcataa 42458035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 43717193 - 43717117
Alignment:
Q  171 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    ||||||||||||  | || ||||||||  ||||||||||| | | |||||||| |||| |||||||||||||||||||    
T  43717193 tataagctatctccgtgagcttatgaaaataagctgaaaacaacctatgaaaa-tgtcctaagctgttttcataagtt 43717117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 1801721 - 1801760
Alignment:
Q  211 aagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  1801721 aagcttatgaaca-tgtcataagctgttttcataagttctc 1801760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 19608661 - 19608609
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcg 252  Q
    |||||| |||| |||||||||| | ||||||||||||| || |||||||||||    
T  19608661 taagctcaaaatagcttatgaagaatgtcataagctgtgtttataagttctcg 19608609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 24100977 - 24101021
Alignment:
Q  207 aaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||||| | ||||||||| ||||| |||||||||||    
T  24100977 aaaaaagcttatgaatattgtcataaggtgtttccataagttctc 24101021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 43529903 - 43529836
Alignment:
Q  183 tagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||| ||||||||  ||| ||||||| |||||||||| | || |||||||||||||||||| |||||    
T  43529903 tagagagcttatgaaaataaactgaaaatagcttatgaaca-tggcataagctgttttcataaattctc 43529836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 8e-27; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 146 - 250
Target Start/End: Complemental strand, 16937966 - 16937861
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| |||||||||||||||| ||| ||||| || ||||||||| |||  |||||||||||||||||||||||  ||||||||||||||||||||    
T  16937966 tttttgtatatgctataagttgtttttatacgctatattggagaacttaggaaaataagctgaaaaaagcttatgaaatttgtcataagctgttttcata 16937867  T
Q  245 agttct 250  Q
    ||||||    
T  16937866 agttct 16937861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 16458062 - 16457956
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| |||||||||||||||| || |||||  || |||||||| ||||  ||| ||||||| |||||||||||| ||||||||||||||||||||    
T  16458062 tttttgtatatgctataagttgtttttatgagctaaattggagaacttgtgaaaataaactgaaaagagcttatgaaaactgtcataagctgttttcata 16457963  T
Q  245 agttctc 251  Q
    |||||||    
T  16457962 agttctc 16457956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 12857765 - 12857682
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||| || |||||||||||||  |||||||||||||| || |||||| ||||||||| |||||||||||||||||    
T  12857765 ttttataagctatattggagaacttatgaaaataagctgaaaaaaggttgtgaaaattgtcataagttgttttcataagttctc 12857682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 250
Target Start/End: Complemental strand, 3735228 - 3735136
Alignment:
Q  159 tataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||||||||| ||||  ||| | ||||||||||||||  ||||||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  3735228 tataagttgtttttataaattatataagagaacttatgaagataagctgaaaaaagcttttgaaaattgtcataagctgttttcatcagttct 3735136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 251
Target Start/End: Complemental strand, 12857423 - 12857315
Alignment:
Q  144 tatttttgtatttgctataagttg-ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    ||||||||||  |||||| || || ||||||||||||| || |||||||||  ||  ||||||||||||||||| |||||| ||||||||| ||||||||    
T  12857423 tatttttgtacatgctattagctgattttataagctatattggagaacttacaaaaataagctgaaaaaagcttgtgaaaattgtcataagttgttttca 12857324  T
Q  243 taagttctc 251  Q
    |||||||||    
T  12857323 taagttctc 12857315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 251
Target Start/End: Original strand, 10639967 - 10640046
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||| |||| || |||||||||||||  ||||||  |||||||||||||||| |||||||||||||||||||||||||||    
T  10639967 ataaactattttggagaacttatgaaaataagctagaaaaagcttatgaaaaatgtcataagctgttttcataagttctc 10640046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 251
Target Start/End: Original strand, 39105478 - 39105557
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||| |||||||||||||  |||||| |||| |||||||||| | ||||||||||||||||||||| |||||    
T  39105478 ataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctgttttcataaattctc 39105557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 251
Target Start/End: Complemental strand, 1465091 - 1464997
Alignment:
Q  157 gctataagttgttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||| |||||||||||||||| ||| |||| ||||  ||||||||||| | |||||||  | || ||||||||||||||||||||||||    
T  1465091 gctataagttattttataagctatcttggaggacttgtgaaaataagctgaaaacaacttatgagcaatgccataagctgttttcataagttctc 1464997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 150 - 251
Target Start/End: Original strand, 29925832 - 29925934
Alignment:
Q  150 tgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    ||||| |||||||||||||||  ||||||||| || |||||||||||||  |||| |||||||| |  ||||| | ||||||||||||||||||||||||    
T  29925832 tgtatgtgctataagttgtttacataagctatattggagaacttatgaaaataagttgaaaaaaacacatgaacattgtcataagctgttttcataagtt 29925931  T
Q  249 ctc 251  Q
    |||    
T  29925932 ctc 29925934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 246
Target Start/End: Original strand, 40426752 - 40426853
Alignment:
Q  146 tttttgtatttgctataagttgtttta-taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    |||||||||||||| |||| |||||   |||||| |||| ||||||||| |||  |||||| ||||||||||||||||| || |||||||||||||||||    
T  40426752 tttttgtatttgctgtaagctgtttccgtaagctgtcttggagaacttacgaaaataagcttaaaaaagcttatgaaaaatggcataagctgttttcata 40426851  T
Q  245 ag 246  Q
    ||    
T  40426852 ag 40426853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 43300865 - 43300971
Alignment:
Q  146 tttttgtatttgctataagttgtttta-taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| | ||||||||||||||  ||||||||||| |||||||||||||  |||||||||| | ||||||  ||| ||||||| |||||||| |||    
T  43300865 tttttgtatatcctataagttgtttttgtaagctatcttggagaacttatgaaaataagctgaaacatgcttatataaaatgtcataggctgtttttata 43300964  T
Q  245 agttctc 251  Q
    | |||||    
T  43300965 acttctc 43300971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 32009682 - 32009783
Alignment:
Q  149 ttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagctt-atgaaaagtgtcataagctgttttcataag 246  Q
    |||||| |||||||| ||||||| ||||||||| || |||||||||||||   ||| | |||||||||| ||||||| ||||| ||||||||||||||||    
T  32009682 ttgtatatgctataaattgtttttataagctatattggagaacttatgaaaacaagttcaaaaaagctttatgaaaattgtcacaagctgttttcataag 32009781  T
Q  247 tt 248  Q
    ||    
T  32009782 tt 32009783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 245
Target Start/End: Original strand, 37954696 - 37954773
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataa 245  Q
    ||||||||||||| || |||||| ||||||  |||| ||||||||||| ||||||| | |||||||||||||||||||    
T  37954696 ttttataagctatattggagaacatatgaaaataagttgaaaaaagctaatgaaaattttcataagctgttttcataa 37954773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 251
Target Start/End: Complemental strand, 7706054 - 7705975
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||| || |||||||| ||||  ||||| |||||||||   |||||| |||||||||||||||||||||||||||    
T  7706054 ataagctatattggagaacttgtgaaaataagccgaaaaaagcaggtgaaaactgtcataagctgttttcataagttctc 7705975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 250
Target Start/End: Original strand, 2568656 - 2568749
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||||||||||| |||||||||| | |||| || |||||  |||||| |||| | |||||||| | ||||||||||||||||||||||||||    
T  2568656 gctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaata-tgtcataagctgttttcataagttct 2568749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 35446082 - 35446148
Alignment:
Q  185 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||||  |||||||||||||||||| ||||| |||||||| ||||||||  ||||||||    
T  35446082 gagaacttatgaaaataagctgaaaaaagcttacgaaaaatgtcataaactgttttcgaaagttctc 35446148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 25461078 - 25461183
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| || ||||||||||||| ||||||| | || ||||||| |||||  |||||||||||| | ||||||||| || ||||||||| || || |    
T  25461078 tttttgtatatgttataagttgttttcataagctctattggagaactgatgaaaataagctgaaaaacgtttatgaaaattgccataagctgattccaaa 25461177  T
Q  245 agttct 250  Q
    ||||||    
T  25461178 agttct 25461183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 34669773 - 34669708
Alignment:
Q  185 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagct-gttttcataagttc 249  Q
    |||||||| |||| ||||||||||||||||||||||||| |||||| || | ||||||||||||||    
T  34669773 gagaacttctgaaattaagctgaaaaaagcttatgaaaaatgtcattagttagttttcataagttc 34669708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 13697828 - 13697764
Alignment:
Q  159 tataagttgttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaa 223  Q
    |||||||||||||||||||||| || ||||| |||||||  |||| |||||||| ||||||||||    
T  13697828 tataagttgttttataagctatgttggagaagttatgaaaataagttgaaaaaaacttatgaaaa 13697764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 42500298 - 42500219
Alignment:
Q  171 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||| || |||||||||||||  |||| ||||||| ||||||||||| |||| |||| ||||| |||||||||||    
T  42500298 tataagctatattggagaacttatgaaaataagttgaaaaa-gcttatgaaaattgtcgtaagttgtttccataagttctc 42500219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 4014493 - 4014426
Alignment:
Q  160 ataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtg 226  Q
    ||||| |||||| |||||||||||| |||||||||||||  ||||||||||| |||||||||| ||||    
T  4014493 ataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatgaacagtg 4014426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 251
Target Start/End: Original strand, 7984983 - 7985062
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||| ||||| |||||||  ||||||||||| |||||||||| |  |||| ||||||||||| |||| ||||    
T  7984983 ataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaacaacgtcacaagctgttttcttaagctctc 7985062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 17368675 - 17368768
Alignment:
Q  158 ctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||||| |||||||||||| ||||  ||||| |  |||||||||||  || |||||| | ||||||||| |||||||||||||||||    
T  17368675 ctataagttgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaaca-tgtcataagttgttttcataagttctc 17368768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 251
Target Start/End: Complemental strand, 29845489 - 29845413
Alignment:
Q  173 taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||| ||||| |||||||| ||||||||||| |||||||  || || ||||||||| |||||||||||||||    
T  29845489 taagctatcttggagaagttatgaatataagctgaaaacagcttat-taacgtatcataagct-ttttcataagttctc 29845413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 242
Target Start/End: Original strand, 39477893 - 39477967
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    ||||||||||||| ||||||||||| ||||  ||||| ||||||| ||| |||||| |||||| |||||| ||||    
T  39477893 ttttataagctatgttagagaacttctgaaaataagcagaaaaaaacttttgaaaattgtcatcagctgtgttca 39477967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 250
Target Start/End: Original strand, 42646685 - 42646759
Alignment:
Q  176 gctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    |||||||| ||||||||||| |  ||| || ||||||||||||||||| |||| ||| || ||||||||||||||    
T  42646685 gctatcttcgagaacttatggaaataaactaaaaaaagcttatgaaaaatgtcctaaacttttttcataagttct 42646759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 248
Target Start/End: Complemental strand, 9202817 - 9202728
Alignment:
Q  160 ataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    ||||| |||||| ||||| ||||||  ||||||||||||  ||||||| ||| |||||||||| | ||||||||||||||| ||| ||||    
T  9202817 ataagctgttttcataagttatcttgaagaacttatgaaaataagctggaaacagcttatgaacaatgtcataagctgtttccattagtt 9202728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 2973557 - 2973521
Alignment:
Q  215 ttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||| |||||||||||||||||||||||||||    
T  2973557 ttatgaaaattgtcataagctgttttcataagttctc 2973521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 3280771 - 3280696
Alignment:
Q  172 ataagctatcttagagaactt-atgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagt 247  Q
    |||||||||||| |||||||| |||||  ||| || |||| |||||||||| | |||||||||||||||||||||||    
T  3280771 ataagctatctttgagaactttatgaaaataaactaaaaagagcttatgaaga-tgtcataagctgttttcataagt 3280696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 221
Target Start/End: Original strand, 7907868 - 7907944
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaa 221  Q
    |||||||||  | ||||||||||||| ||||||| |||| |||| |||||||| |||||||||||| | ||||||||    
T  7907868 tttttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 7907944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 3932719 - 3932664
Alignment:
Q  185 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtttt 240  Q
    ||||||||| |||  ||||||| |||||||||||||||| | ||||||||||||||    
T  3932719 gagaacttacgaaaataagctgtaaaaagcttatgaaaattatcataagctgtttt 3932664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 9107100 - 9107183
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||| |||| ||| || |||||||||||||  | ||| |||||||| || |||||| |||| |||||||||||||| |||||||    
T  9107100 ttttgtaagttatattggagaacttatgaaaattagcagaaaaaagtttgtgaaaattgtcctaagctgttttcatgagttctc 9107183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 242
Target Start/End: Complemental strand, 32703349 - 32703263
Alignment:
Q  156 tgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    |||||||||||||||| |||||||||||  ||||| |||| ||  ||||||||||| || |||| ||| |||||||||||||| ||||    
T  32703349 tgctataagttgttttcataagctatctaggagaatttataaaaataagctgaaaacagtttat-aaacgtgtcataagctgtcttca 32703263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 706505 - 706555
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||||||| |||||||||| | |||||||| || ||||||||||||||    
T  706505 taagctgaaaatagcttatgaacaatgtcataaactattttcataagttct 706555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 250
Target Start/End: Complemental strand, 6587179 - 6587086
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||||||||||| |||||||||  | |||||||| ||||  ||||||| ||| ||||||||||   ||||||||||||||||  ||||||||    
T  6587179 gctataagttgttttcataagctatagtggagaacttgtgaaaataagctgtaaacagcttatgaacc-tgtcataagctgtttttttaagttct 6587086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 8334601 - 8334663
Alignment:
Q  188 aacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||||||  ||||||||||| |  ||||||||  ||||||||||| ||||||||||||||    
T  8334601 aacttatgaaaataagctgaaaacaatttatgaaatatgtcataagctattttcataagttct 8334663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 17258921 - 17258861
Alignment:
Q  190 cttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||  ||||||||||| |||||||||| | ||||||||||| |||||||| ||||||    
T  17258921 cttatgaaaataagctgaaaacagcttatgaaca-tgtcataagctattttcataggttctc 17258861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 31038333 - 31038374
Alignment:
Q  207 aaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    ||||||||||||||||| ||||||||||| |||| |||||||    
T  31038333 aaaaaagcttatgaaaaatgtcataagctatttttataagtt 31038374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 31047557 - 31047598
Alignment:
Q  207 aaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    ||||||||||||||||| ||||||||||| |||| |||||||    
T  31047557 aaaaaagcttatgaaaaatgtcataagctatttttataagtt 31047598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 32859762 - 32859698
Alignment:
Q  185 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||| |||||||  |||||||||||| ||||||||||| |||| |||| ||||||||||| ||||    
T  32859762 gagaagttatgaaaataagctgaaaaa-gcttatgaaaaatgtcgtaagttgttttcataaattct 32859698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 32861934 - 32861870
Alignment:
Q  185 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||| |||||||  |||||||||||| ||||||||||| |||| |||| ||||||||||| ||||    
T  32861934 gagaagttatgaaaataagctgaaaaa-gcttatgaaaaatgtcgtaagttgttttcataaattct 32861870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 34160751 - 34160808
Alignment:
Q  178 tatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagct 235  Q
    |||||| |||||||||||||  ||||||||||| || ||||||| ||||||| |||||    
T  34160751 tatcttggagaacttatgaaaataagctgaaaacagtttatgaacagtgtcacaagct 34160808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 3520630 - 3520670
Alignment:
Q  211 aagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||||  |||||||| |||||||||||||||||    
T  3520630 aagcttatgaaaaaagtcataagatgttttcataagttctc 3520670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 6521119 - 6521171
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataag-ctgttttcataagttctc 251  Q
    ||||| ||||||||||| |||||| ||||||||| | ||||||||||||||||    
T  6521119 taagccgaaaaaagcttgtgaaaattgtcataagtccgttttcataagttctc 6521171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 6593297 - 6593357
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagctt 216  Q
    |||||||| |||||| |||||||| |||||||| ||||||||  ||||||||||| |||||    
T  6593297 gctataagctgttttgataagctaccttagagagcttatgaaaataagctgaaaagagctt 6593357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 251
Target Start/End: Original strand, 15246818 - 15246926
Alignment:
Q  144 tatttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    |||||| ||||  ||||| || |||||| |||||||||||||||||| | || ||  |||| || ||||| ||||||||   ||||||||| || |||||    
T  15246818 tattttcgtataagctatgagctgttttcataagctatcttagagaaatgataaaaataagttgcaaaaaacttatgaatgatgtcataagttgctttca 15246917  T
Q  243 taagttctc 251  Q
    |||||||||    
T  15246918 taagttctc 15246926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 32022059 - 32022163
Alignment:
Q  147 ttttgtatttgctataagttgtttta-taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataa 245  Q
    |||||||| |||||||| || ||||| ||| |||| ||| | |||||  |||  || |||||||||||||| |||||| |||| |||| ||||||| |||    
T  32022059 ttttgtatatgctataaattattttagtaaactatattaaataacttgagaaaataggctgaaaaaagcttgtgaaaattgtcttaagatgttttcgtaa 32022158  T
Q  246 gttct 250  Q
    |||||    
T  32022159 gttct 32022163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 32942605 - 32942657
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaa 197  Q
    ||||| ||| ||||||||| |||||| |||||||||||| |||||||||||||    
T  32942605 tttttttatatgctataagctgttttcataagctatcttggagaacttatgaa 32942657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 38104927 - 38104875
Alignment:
Q  158 ctataagttgttttataagctatcttagagaacttatgaatttaagctgaaaa 210  Q
    ||||||| ||||| ||||||||||||||||| |||||| |  |||||||||||    
T  38104927 ctataagctgtttcataagctatcttagagagcttatggaaataagctgaaaa 38104875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 41419318 - 41419409
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    ||||||||||||||| ||||||||| || ||||  | ||||| | || ||||||| |||| ||||| | |||||||||||||||||| |||||    
T  41419318 gctataagttgttttcataagctatttttgagacttaatgaaat-aatctgaaaatagctcatgaacaatgtcataagctgttttcacaagtt 41419409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 5e-25; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 26771252 - 26771358
Alignment:
Q  146 tttttgtatttgctataag-ttgttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| ||||||||| || ||||||||| ||| ||||||||||||||||  |||| ||||||| |||| |||||| ||||||||||||||||||||    
T  26771252 tttttgtatatgctataagctttttttataagatatattagagaacttatgaaaataagttgaaaaaggcttttgaaaattgtcataagctgttttcata 26771351  T
Q  245 agttctc 251  Q
    |||||||    
T  26771352 agttctc 26771358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 146 - 250
Target Start/End: Complemental strand, 10758339 - 10758235
Alignment:
Q  146 tttttgtatttgctataagttgt-tttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| ||||||||||||| |||||||||||| ||||  ||||||||||   |||||||||||||||| |||||| ||||||||||||||||||||    
T  10758339 tttttgtatatgctataagttgtctttataagctatattagc-aacttatgaaaacaagctgaaaaaagcttttgaaaattgtcataagctgttttcata 10758241  T
Q  245 agttct 250  Q
    | ||||    
T  10758240 aattct 10758235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 150 - 251
Target Start/End: Original strand, 27028822 - 27028924
Alignment:
Q  150 tgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    ||||| ||||||||| |||||| |||||||||||| |||| ||||||||  ||||||||||| |||||||||||| |||| ||||||||||||| || ||    
T  27028822 tgtatatgctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaaaaatgtcctaagctgttttcagaattt 27028921  T
Q  249 ctc 251  Q
    |||    
T  27028922 ctc 27028924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 38648338 - 38648444
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| || ||| ||||||||| ||||||||||||  |||||||||||| ||| ||| |||||||||||||| || |||||| |||||||||||||    
T  38648338 tttttgtatatgttatgagttgttttcataagctatcttgtagaacttatgaaattacgcttaaaaaagcttatgagaactgtcatgagctgttttcata 38648437  T
Q  245 agttctc 251  Q
    || ||||    
T  38648438 aggtctc 38648444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 25930637 - 25930530
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtca-taagctgttttcat 243  Q
    ||||||||| |||| ||| ||||||| |||||||||||| |||||||| |||   |||||||||||||||||| ||||||||||| |||| | |||||||    
T  25930637 tttttgtatatgctttaaattgttttcataagctatcttggagaacttgtgatagtaagctgaaaaaagcttacgaaaagtgtcattaagattttttcat 25930538  T
Q  244 aagttctc 251  Q
    ||||||||    
T  25930537 aagttctc 25930530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 250
Target Start/End: Original strand, 12976223 - 12976304
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||||||||| |||||||||||||||| | |||||||||||||||| |||||| ||| | |||||||| |||||||||||    
T  12976223 ttttataagctatattagagaacttatgaaat-aagctgaaaaaagcttttgaaaattgttagaagctgttctcataagttct 12976304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 8146362 - 8146422
Alignment:
Q  191 ttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||| |||||||| ||||| ||||||||||||||||||| ||||||||||||||||||    
T  8146362 ttatgaaattaagctggaaaaaacttatgaaaagtgtcataaactgttttcataagttctc 8146422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 251
Target Start/End: Complemental strand, 30251534 - 30251431
Alignment:
Q  149 ttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagt 247  Q
    |||||| || |||||| |||||| |||||||||||| ||  |||||||||  ||||||| |||||||||||||||| ||  ||||||||||||| |||||    
T  30251534 ttgtatatgttataagctgttttcataagctatcttggaccacttatgaaaataagctgtaaaaagcttatgaaaaatgcaataagctgttttcgtaagt 30251435  T
Q  248 tctc 251  Q
    ||||    
T  30251434 tctc 30251431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 251
Target Start/End: Complemental strand, 31716283 - 31716204
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||| ||||| ||||  |  |||||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  31716283 ataagctatcttggagaagttatagaaataagctgaaaaaagcttatgaagaatgtcataagctgttttcaaaagttctc 31716204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 10120783 - 10120849
Alignment:
Q  185 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||||  ||||||||||| ||| ||||| || |||||||||||||||||||||||||||    
T  10120783 gagaacttatgaaaataagctgaaaacagcatatgataaatgtcataagctgttttcataagttctc 10120849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 18133644 - 18133749
Alignment:
Q  147 ttttgtatttgctataagttg-ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataa 245  Q
    |||||||| | ||||||| || |||||||| |||| || |||||||||||||  ||||||||||||||||| |||||| ||| |||||||| ||||| ||    
T  18133644 ttttgtatatcctataagctggttttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgttataagctgatttcacaa 18133743  T
Q  246 gttctc 251  Q
    | ||||    
T  18133744 gctctc 18133749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 35534683 - 35534590
Alignment:
Q  159 tataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||| |||||||| ||||| ||| || |||||||||||||  ||||| ||||||||||| | |||| |||||||||||||||||| ||||||||    
T  35534683 tatatgttgttttcataagttatattggagaacttatgaaagtaagccgaaaaaagcttgttaaaattgtcataagctgttttcacaagttctc 35534590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 35749640 - 35749547
Alignment:
Q  159 tataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||  ||||||||||||| ||||||||||||  || | ||||||||| ||||||||| ||  | |||||||||||||||||||||    
T  35749640 tataagttgtttccataagctatcttaaagaacttatgaaaatatgttgaaaaaagtttatgaaaaatgctacaagctgttttcataagttctc 35749547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 251
Target Start/End: Complemental strand, 29168142 - 29168034
Alignment:
Q  144 tatttttgtatttgctataagttgtttta-taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    ||||||||||| ||||||||| ||||||  | ||||||||| ||||||||||| |  |||||||| |||   ||||||||| |||||||| ||||||| |    
T  29168142 tatttttgtatatgctataagctgttttcctgagctatcttggagaacttatggaaataagctgagaaacatttatgaaaaatgtcataatctgttttta 29168043  T
Q  243 taagttctc 251  Q
    |||||||||    
T  29168042 taagttctc 29168034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 29205795 - 29205900
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| ||||||||||| |||| |||| |||| || ||||| |||||||  || | | ||||||||||||||||| ||||||| |||||||| |||    
T  29205795 tttttgtatatgctataagttattttcataaactattttggagaatttatgaaagtaggtt-aaaaaagcttatgaaaaatgtcatacgctgttttaata 29205893  T
Q  245 agttctc 251  Q
    |||||||    
T  29205894 agttctc 29205900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 43045783 - 43045697
Alignment:
Q  170 ttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaaaa 256  Q
    |||||| |||| || |||||||||||||  |||| |||||||||||||| |||| |||  ||||||||||||||||| |||| ||||    
T  43045783 ttataaactatattggagaacttatgaaaataagttgaaaaaagcttattaaaattgttgtaagctgttttcataagatctccaaaa 43045697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 1930035 - 1930128
Alignment:
Q  159 tataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||| |||||| |||||||||||| | || ||| ||||  ||||||||||| |||||||||| | |||||||| ||||||||| ||||||||    
T  1930035 tataagctgttttcataagctatcttggtgaccttgtgaaaataagctgaaaacagcttatgaacaatgtcataaactgttttcacaagttctc 1930128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 9956884 - 9956791
Alignment:
Q  159 tataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||| |||| ||||||| |||||||||||||  |||||||||||   |||||||| | || ||||| || |||||||||||||||    
T  9956884 tataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaactacttatgaacaatgccataaactattttcataagttctc 9956791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 16825607 - 16825515
Alignment:
Q  159 tataagttgttt-tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||| || ||||||| ||   |||||||||||  |||| ||||||| ||||||||||| ||||||||||| |||||||||||||||    
T  16825607 tataagttgtttctacaagctatattgccgaacttatgaaaataagttgaaaaa-gcttatgaaaattgtcataagctattttcataagttctc 16825515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 28763365 - 28763461
Alignment:
Q  156 tgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaa-aagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||| |||||||||| ||||||||| ||   ||||||||||| | ||| |||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  28763365 tgctagaagttgtttttataagctatattgctgaacttatgaaat-aagttgaaaaaaagcttatgaaaattgttataagctgttttcataagttctc 28763461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 13958156 - 13958061
Alignment:
Q  156 tgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||| |||||| ||||| ||||| ||| || |||||||| ||| ||| |||||||||||||||| ||||||||  |||||||| ||||||||    
T  13958156 tgctataagctgttttcataagttatctcagaaaaattatgaatataaactggaaaaagcttatgaaaa-tgtcataatttgttttcaaaagttctc 13958061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 251
Target Start/End: Original strand, 10114487 - 10114582
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||| |||||| || |||||| || |||||| ||||||  ||||||||||| ||| ||||| || ||| ||||| |||||||||||||||||    
T  10114487 gctataagctgttttcattagctatattggagaacatatgaaaataagctgaaaacagcatatgataaatgttataagttgttttcataagttctc 10114582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 251
Target Start/End: Original strand, 13459643 - 13459737
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||||| ||||   ||| || ||| ||||||||  || |||||||| || ||||||||| |||||||||||||||||||||||||||    
T  13459643 gctataagttgttttcataaatcatcctacagagcttatgaaaataggctgaaaacagtttatgaaaa-tgtcataagctgttttcataagttctc 13459737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 16347200 - 16347279
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtca-taagctgttttcataag 246  Q
    |||||||| |||||||   ||||||||||  |||||||||| |||||||||||||||||||| |||  ||||||||||||    
T  16347200 ttttataaactatcttgttgaacttatgatattaagctgaataaagcttatgaaaagtgtcattaacttgttttcataag 16347279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 35644031 - 35643968
Alignment:
Q  185 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    |||| ||||||||  |||| ||||||||||||||||||| |||||||| || ||||||||||||    
T  35644031 gagagcttatgaaaataagttgaaaaaagcttatgaaaattgtcataaactattttcataagtt 35643968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 258
Target Start/End: Complemental strand, 2458622 - 2458537
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaaaaga 258  Q
    |||||||||| |||||| |||||| |  ||| ||||||| |||||||||| | || |||||||||| ||||||||||||| ||||||    
T  2458622 ataagctatcctagagagcttatggaaataaactgaaaacagcttatgaaca-tgccataagctgtcttcataagttctccaaaaga 2458537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 6881914 - 6882020
Alignment:
Q  146 tttttgtatttgctataagttgttttataagctatcttagagaacttatgaatttaagc-tgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||| ||| ||||||||| ||||||||||||||  || |||||||||||||  |||||   |||||||||| | |||| | |||| |||||||||||||    
T  6881914 tttttatatatgctataagctgttttataagctaaattggagaacttatgaaaataagcaaaaaaaaagcttgttaaaattatcatgagctgttttcata 6882013  T
Q  245 agttctc 251  Q
     ||||||    
T  6882014 ggttctc 6882020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 11861791 - 11861869
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaa 223  Q
    ||||||||| |||||||||||||||| |||||||||  |||||||||||||||  || | | |||||||||| ||||||    
T  11861791 tttttgtatatgctataagttgtttttataagctataatagagaacttatgaaaatacgttaaaaaaagcttttgaaaa 11861869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 250
Target Start/End: Complemental strand, 12782257 - 12782163
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||||||||||| ||||| |||||||||  | |||||||  | ||||||||| |||||||||| | |||||||  || ||||||||||||||    
T  12782257 gctataagttgttttcataagatatcttagatcatttatgaaacttagctgaaaagagcttatgaacaatgtcatagcctattttcataagttct 12782163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 42893533 - 42893467
Alignment:
Q  185 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||||  ||||||||||||||||||| ||  |  |||||||||||||| ||||||||||    
T  42893533 gagaacttatgaaaataagctgaaaaaagcttattaagcgcatcataagctgtttttataagttctc 42893467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 1058126 - 1058054
Alignment:
Q  178 tatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||| |||||||||||||  ||||| ||||||| || ||||||| |||||||||| ||||||| ||||||||    
T  1058126 tatcttggagaacttatgaaaataagcggaaaaaa-ctaatgaaaaatgtcataagcagttttcaaaagttctc 1058054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 10383927 - 10383975
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttc 249  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||||||||    
T  10383927 taagctgtaaacagcttatgaaaa-tgtcataagctgttttcataagttc 10383975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 37945585 - 37945689
Alignment:
Q  147 ttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataa 245  Q
    |||||||| ||||||| |||||||| ||||||||| ||  | ||||| ||||  |||| | ||||| ||||||| ||| |||||||||||||||||| ||    
T  37945585 ttttgtatatgctata-gttgtttttataagctatattgtacaacttctgaaaataagttaaaaaatgcttatggaaattgtcataagctgttttcagaa 37945683  T
Q  246 gttctc 251  Q
    ||||||    
T  37945684 gttctc 37945689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 251
Target Start/End: Complemental strand, 32841014 - 32840963
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||| | |||||||| | ||||||||| |||||||||||||||||    
T  32841014 taagctgaaaacaacttatgaacaatgtcataagttgttttcataagttctc 32840963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 33808313 - 33808396
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||| |||||||||| |  |||||||||||  |||||| |||| | |||||||| | | ||||||||| |||||||||||||||    
T  33808313 ttttgtaagctatctcaatgaacttatgaaaataagctaaaaacaacttatgaacaatatcataagctattttcataagttctc 33808396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 43504761 - 43504843
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||||||| ||||||||||| |  ||||||||||| ||||||| |||   ||| |||| ||||||||| |||||||    
T  43504761 ttttataagctatcttggagaacttatggaaataagctgaaaacagcttat-aaacaagtcgtaagttgttttcatcagttctc 43504843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 3254267 - 3254316
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||||||| |||||||||| | ||||||||||||||||| ||||||||    
T  3254267 taagctgaaaacagcttatgaaca-tgtcataagctgttttcttaagttct 3254316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 20672760 - 20672825
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagc 234  Q
    |||||||||||||| | |||| ||||||||  ||||||||||| |||||||||| | ||||||||||    
T  20672760 ttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaaca-tgtcataagc 20672825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 31751595 - 31751546
Alignment:
Q  190 cttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttt 239  Q
    ||||||||  ||||||||||| |||||||||| | |||||||||||||||    
T  31751595 cttatgaaaataagctgaaaatagcttatgaacaatgtcataagctgttt 31751546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 40859796 - 40859763
Alignment:
Q  214 cttatgaaaagtgtcataagctgttttcataagt 247  Q
    |||||||||| |||||||||||||||||||||||    
T  40859796 cttatgaaaattgtcataagctgttttcataagt 40859763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 3537002 - 3536934
Alignment:
Q  171 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttt 239  Q
    |||||| |||||| ||||||||||| |  ||||||||||| |  ||||||| | |||||||||||||||    
T  3537002 tataagatatcttggagaacttatggaaataagctgaaaacaatttatgaacaatgtcataagctgttt 3536934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 30389113 - 30389184
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||| || |||||||||||||||  ||||||||||| | |||||||| | |||||| |||| ||||||||    
T  30389113 ataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaaca-tgtcattagctattttcata 30389184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 31885141 - 31885053
Alignment:
Q  146 tttttgtatttgctataagttgttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgt 237  Q
    |||||||||  |||||||  |||||| ||||||||| |||||| ||||  |||  |||||||||| |||||||||| | |||||||||||||    
T  31885141 tttttgtataagctataaactgttttgtaagctatcctagagagcttaaaaat--aagctgaaaatagcttatgaata-tgtcataagctgt 31885053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 43717993 - 43717945
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatga 220  Q
    |||||||||||| |||||||||||||  |||||| |||| |||||||||    
T  43717993 ataagctatcttggagaacttatgaaagtaagctaaaaacagcttatga 43717945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 146 - 242
Target Start/End: Complemental strand, 34430544 - 34430447
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    ||||||||| || |||||| |||||| |||||||||||| ||||| |||||||  ||||||||||||||||||||| || ||||||||||||||||||    
T  34430544 tttttgtatatgttataaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgttttca 34430447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 9763563 - 9763644
Alignment:
Q  162 aagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    |||||||||| ||||||||| ||  |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  9763563 aagttgttttcataagctatattgtagaacttatgaaattaagttgaaaaaagcttatcaaaagtgtcataagctgttttca 9763644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 20368263 - 20368158
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    |||||||||  | ||||||||||||| ||||||| |||| |||||||||||||  |||| |||||  |||||||||| | ||||||||| ||||||||||    
T  20368263 tttttgtatgagttataagttgttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaaca-tgtcataagttgttttcata 20368165  T
Q  245 agttctc 251  Q
    |||||||    
T  20368164 agttctc 20368158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 250
Target Start/End: Original strand, 31624088 - 31624181
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    |||||||| |||||| ||| |||||||| ||||| |||||||  |||| |||||| |||||||||| | ||||||||||||||||||||||||||    
T  31624088 gctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaaca-tgtcataagctgttttcataagttct 31624181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 248
Target Start/End: Original strand, 2735054 - 2735159
Alignment:
Q  144 tatttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 242  Q
    |||||||||||   ||||||| |||||| |||||| |||||  | ||||||||||  ||||| ||||| |||||||||||| |||||||||| |||||||    
T  2735054 tatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataagccgaaaacagcttatgaaaaatgtcataagccgttttca 2735153  T
Q  243 taagtt 248  Q
    ||||||    
T  2735154 taagtt 2735159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 251
Target Start/End: Complemental strand, 35070708 - 35070627
Alignment:
Q  170 ttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||| || |||||||||||||   ||||  |||||||||| |||||| ||||||||||||||||| |||||||||    
T  35070708 ttataagctattttggagaacttatgaaaacaagcccaaaaaagcttgtgaaaattgtcataagctgttttcgtaagttctc 35070627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 251
Target Start/End: Complemental strand, 9093628 - 9093533
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||| |||||| ||||||| |||||||||||||| |||  ||||||||||| || |||| || | ||||||||||| |||||||||| ||||    
T  9093628 gctataagctgttttcataagctgtcttagagaacttaagaaaataagctgaaaacaggttattaacaatgtcataagctattttcataagctctc 9093533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 6536602 - 6536680
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaa 223  Q
    ||||||||| |||||||||||||||| | ||||||| || ||||| |||||||  |||| |||||||||||||||||||    
T  6536602 tttttgtatatgctataagttgtttttagaagctatattggagaatttatgaaaataagttgaaaaaagcttatgaaaa 6536680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 9912234 - 9912168
Alignment:
Q  185 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||||  |||||| |||| |||||||||| | |||||||||||| ||||||||||||||    
T  9912234 gagaacttatgaaaataagctcaaaacagcttatgaacaatgtcataagctggtttcataagttctc 9912168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 35099024 - 35099129
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||| || ||||||||||||| |||||||||||||||| | || ||||  |||| |||||||| |||| ||||| |||||| |||||||||| ||    
T  35099024 tttttgtatatgttataagttgttttcataagctatcttagagtatttttgaaaataagttgaaaaaa-cttacgaaaaatgtcattagctgttttccta 35099122  T
Q  245 agttctc 251  Q
    | |||||    
T  35099123 aattctc 35099129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 18076231 - 18076295
Alignment:
Q  186 agaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||||||||| |||| |||||| |||| ||||||| |||||||||||| |||||||| ||||    
T  18076231 agaacttatgaatataagttgaaaacagctcatgaaaattgtcataagctggtttcataaattct 18076295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 250
Target Start/End: Original strand, 848022 - 848081
Alignment:
Q  191 ttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    |||||||  |||||||||||||||||| ||||| |||||||||| ||||| |||||||||    
T  848022 ttatgaaaataagctgaaaaaagcttaagaaaaatgtcataagcagtttttataagttct 848081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 256
Target Start/End: Original strand, 24982696 - 24982803
Alignment:
Q  150 tgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    ||||| ||||||||| |||||| ||||| ||| || ||||||||||||   |||||| ||||||||| || |||| |||||||||||||| ||| | |||    
T  24982696 tgtatatgctataagctgttttcataagttattttggagaacttatgagggtaagctaaaaaaagctcattaaaaatgtcataagctgttctcaaatgtt 24982795  T
Q  249 ctcgaaaa 256  Q
    ||| ||||    
T  24982796 ctccaaaa 24982803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 251
Target Start/End: Original strand, 31813175 - 31813254
Alignment:
Q  172 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||| |||||| ||||||  |||||||||||  ||||||||| | | ||||||||  |||||||||||||||    
T  31813175 ataagctatcttggagaacatatgaaaataagctgaaaacggcttatgaacaatctcataagcaattttcataagttctc 31813254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 13907584 - 13907678
Alignment:
Q  158 ctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||||||| |||||| ||||| ||||| |||||||  ||| ||||||| | ||| |||| | ||||| ||||||||||||||| |||||    
T  13907584 ctataagttgttttcataagccatcttggagaaattatgaaaataaactgaaaataacttgtgaacaatgtcagaagctgttttcataaattctc 13907678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 24626328 - 24626377
Alignment:
Q  199 ttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    ||||||||||||||| ||||||| || ||||||||||||||||| |||||    
T  24626328 ttaagctgaaaaaagtttatgaagagcgtcataagctgttttcaaaagtt 24626377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 30641758 - 30641838
Alignment:
Q  171 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||||||||||| |||| ||||||||| |||   | ||| |||||||||||| |||  ||| ||||||||||||||||||    
T  30641758 tataagctatcttggagagcttatgaatataattaggaaacagcttatgaaaaatgttgtaaactgttttcataagttctc 30641838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 6909955 - 6909892
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaa 208  Q
    ||||||||| |||||||||||||||| ||||  |||||| ||||| ||||||| ||||||||||    
T  6909955 tttttgtatatgctataagttgttttcataacatatcttggagaatttatgaaattaagctgaa 6909892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 251
Target Start/End: Complemental strand, 19411577 - 19411526
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    ||||| ||||||||||||||| || ||||||||||||||| || ||||||||    
T  19411577 taagccgaaaaaagcttatgagaactgtcataagctgtttacaaaagttctc 19411526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 696644 - 696693
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||||||| |||||||||| | |||||||||||||||| |||||||||    
T  696644 taagctgaaaacagcttatgaaca-tgtcataagctgttttgataagttct 696693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 245
Target Start/End: Complemental strand, 2027434 - 2027390
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataa 245  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||||    
T  2027434 taagctgaaaacagcttatggaaa-tgtcataagctgttttcataa 2027390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 12628355 - 12628425
Alignment:
Q  171 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcat 243  Q
    |||||||||| || |||||||||||||  |||| |||||| |||| ||||||  ||||| |||||||||||||    
T  12628355 tataagctattttggagaacttatgaaagtaagttgaaaacagctaatgaaa--tgtcagaagctgttttcat 12628425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 18611102 - 18611163
Alignment:
Q  188 aacttatgaatttaagctga-aaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    |||||||||| ||||| ||| |||||||| | ||||||||| ||||| ||||||||||||||    
T  18611102 aacttatgaaattaagttgagaaaaagctgaggaaaagtgttataagttgttttcataagtt 18611163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 30926578 - 30926611
Alignment:
Q  217 atgaaaagtgtcataagctgttttcataagttct 250  Q
    ||||||| ||||||||||||||||||||||||||    
T  30926578 atgaaaattgtcataagctgttttcataagttct 30926611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 161012 - 160968
Alignment:
Q  168 ttttataagctatcttagagaacttatgaatttaagctgaaaaaa 212  Q
    |||| |||||||| ||||||||||||||||  |||||||||||||    
T  161012 ttttgtaagctatattagagaacttatgaaaataagctgaaaaaa 160968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 696484 - 696531
Alignment:
Q  200 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    |||||| |||| |||||||||| | ||||||||||||||||||||||||    
T  696484 taagctaaaaacagcttatgaaca-tgtcataagctgttttcataagtt 696531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 249
Target Start/End: Original strand, 769126 - 769228
Alignment:
Q  146 tttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    |||||||||  |||||||  |||||| |||||||| ||| ||| ||||| |||  |||| |||||| |||||||||| | ||||||||| ||||||||||    
T  769126 tttttgtataagctataaactgttttcataagctaactt-gaggacttaagaaagtaagttgaaaacagcttatgaaca-tgtcataagatgttttcata 769223  T
Q  245 agttc 249  Q
    |||||    
T  769224 agttc 769228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 31623599 - 31623643
Alignment:
Q  207 aaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 251  Q
    |||||||||| |||||| ||||||||||| |||||| ||||||||    
T  31623599 aaaaaagcttgtgaaaattgtcataagctattttcagaagttctc 31623643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 34910481 - 34910393
Alignment:
Q  157 gctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 244  Q
    ||||||||||||| | |||| || | || |||||||||||||  ||||| ||||| | || ||||| | ||||||||||||||||||||    
T  34910481 gctataagttgttctcataatctgttttggagaacttatgaaagtaagcggaaaacaactcatgaacaatgtcataagctgttttcata 34910393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 245
Target Start/End: Original strand, 58746 - 58829
Alignment:
Q  163 agttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataa 245  Q
    ||||||||| ||||||||| ||  |||||||||||| ||||| ||||||||||||||||||| |||||||| ||| ||||||||    
T  58746 agttgttttcataagctatgttgaagaacttatgaaattaagttgaaaaaagcttatgaaaattgtcataaactgctttcataa 58829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 248
Target Start/End: Original strand, 22220 - 22321
Alignment:
Q  148 tttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataag 246  Q
    ||||||| | ||||||| |||| | ||||||||| || || ||||||||||  |||||||||||||||||| ||||| |||||||||||||||  |||||    
T  22220 tttgtatatactataagctgttatcataagctatgttggaaaacttatgaaaataagctgaaaaaagcttacgaaaattgtcataagctgtttctataag 22319  T
Q  247 tt 248  Q
    ||    
T  22320 tt 22321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0528 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 1003 - 962
Alignment:
Q  207 aaaaaagcttatgaaaagtgtcataagctgttttcataagtt 248  Q
    ||||||||||||||||| ||||||||||| |||| |||||||    
T  1003 aaaaaagcttatgaaaaatgtcataagctatttttataagtt 962  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 306329 - 306413
Alignment:
Q  162 aagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataag 246  Q
    |||||||||| |||||||||| |||||| |||||| |  ||||||||||| ||||||||   | ||||||||||||||| ||||||    
T  306329 aagttgttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttatgggca-tgtcataagctgtttccataag 306413  T

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