View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7483_low_14 (Length: 293)
Name: NF7483_low_14
Description: NF7483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7483_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 11 - 276
Target Start/End: Complemental strand, 15356224 - 15355960
Alignment:
| Q |
11 |
gtgttaatttatggtgtaattatattaaataaaactttttcatttgcaaaaagactcaaatccaaaacttacgacagaaatggattatctacatctgcaa |
110 |
Q |
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| T |
15356224 |
gtgttaatttatggtgtaattatattaaataaaactttttcatttgcaaaa-gactcaaatccaaaacttacgacagaaatggattatctacatctgcaa |
15356126 |
T |
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| Q |
111 |
aatggtacggtatagttgtattgtaatagttggctcatagattggtacttctgtccggttttatcacattttcttcattgtaatgcaggcttgctcgtcg |
210 |
Q |
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| T |
15356125 |
aatggtacggtatagttgtattgtaatagttggctcatagattggtacttctgtccggttttatcacattttcttcattgtaatgcaggcttgctcgttg |
15356026 |
T |
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| Q |
211 |
tcgtaatgtgatattgtttgaatttaccgtcttattgtagtgtttgtttggtgcaacttgacatat |
276 |
Q |
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| T |
15356025 |
tcgtaatgcgatattgtttgaatttaccgtcttattgtagtgtttgtttggtgcaacttgacatat |
15355960 |
T |
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