View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7486_low_9 (Length: 333)

Name: NF7486_low_9
Description: NF7486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7486_low_9
NF7486_low_9
[»] chr1 (89 HSPs)
chr1 (13-311)||(17490253-17490551)
chr1 (13-78)||(639797-639862)
chr1 (13-78)||(33604068-33604133)
chr1 (13-78)||(48022593-48022658)
chr1 (16-83)||(37734853-37734920)
chr1 (13-78)||(6065538-6065603)
chr1 (13-78)||(8258020-8258085)
chr1 (15-78)||(31008338-31008401)
chr1 (13-71)||(5856434-5856492)
chr1 (13-78)||(23944035-23944100)
chr1 (15-68)||(27206767-27206820)
chr1 (13-78)||(31008257-31008322)
chr1 (14-78)||(3384221-3384285)
chr1 (14-78)||(35367556-35367620)
chr1 (14-69)||(37734780-37734835)
chr1 (16-78)||(27206839-27206901)
chr1 (13-69)||(4060178-4060234)
chr1 (14-78)||(6065459-6065523)
chr1 (14-78)||(8257941-8258005)
chr1 (14-78)||(14418135-14418199)
chr1 (14-69)||(2349763-2349818)
chr1 (14-69)||(4602651-4602706)
chr1 (14-69)||(34658393-34658448)
chr1 (14-69)||(40262475-40262530)
chr1 (14-71)||(2352973-2353030)
chr1 (17-78)||(4060252-4060313)
chr1 (14-78)||(639877-639941)
chr1 (15-71)||(1035892-1035948)
chr1 (13-69)||(4602721-4602777)
chr1 (13-69)||(5431417-5431473)
chr1 (13-69)||(19175665-19175721)
chr1 (14-78)||(48022673-48022737)
chr1 (14-69)||(3384301-3384356)
chr1 (16-78)||(1035967-1036029)
chr1 (13-71)||(10256786-10256844)
chr1 (13-71)||(34597525-34597583)
chr1 (13-78)||(40262545-40262608)
chr1 (13-65)||(15439939-15439991)
chr1 (14-78)||(33603989-33604053)
chr1 (14-78)||(52923401-52923465)
chr1 (15-69)||(2349835-2349890)
chr1 (14-69)||(15439869-15439924)
chr1 (17-55)||(2352916-2352954)
chr1 (15-69)||(5431348-5431402)
chr1 (15-69)||(6079142-6079196)
chr1 (17-71)||(6156639-6156693)
chr1 (13-78)||(15351792-15351857)
chr1 (13-62)||(34597590-34597639)
chr1 (17-78)||(34953977-34954038)
chr1 (13-78)||(36040144-36040209)
chr1 (15-48)||(36535717-36535750)
chr1 (13-78)||(52923321-52923386)
chr1 (13-69)||(2122646-2122702)
chr1 (13-69)||(6283612-6283668)
chr1 (23-83)||(14214543-14214603)
chr1 (14-70)||(14967303-14967359)
chr1 (29-85)||(35366962-35367018)
chr1 (13-69)||(52112883-52112939)
chr1 (13-64)||(9135595-9135645)
chr1 (13-76)||(15057657-15057720)
chr1 (13-64)||(45925257-45925307)
chr1 (15-62)||(46906940-46906987)
chr1 (21-67)||(3549788-3549834)
chr1 (13-47)||(3606290-3606324)
chr1 (20-78)||(8338673-8338731)
chr1 (11-77)||(19580183-19580249)
chr1 (15-69)||(24981848-24981902)
chr1 (13-63)||(34658463-34658513)
chr1 (13-47)||(37255155-37255189)
chr1 (13-47)||(39181078-39181112)
chr1 (15-77)||(39940565-39940627)
chr1 (20-78)||(45115254-45115312)
chr1 (17-83)||(46412769-46412835)
chr1 (16-69)||(1409129-1409182)
chr1 (15-64)||(7230022-7230070)
chr1 (14-47)||(12447532-12447565)
chr1 (20-65)||(21305051-21305096)
chr1 (16-69)||(24981921-24981974)
chr1 (13-78)||(45115168-45115233)
chr1 (14-79)||(50550197-50550262)
chr1 (12-45)||(52879915-52879948)
chr1 (13-65)||(4974122-4974173)
chr1 (13-69)||(13288411-13288467)
chr1 (14-78)||(14214607-14214671)
chr1 (13-69)||(19175595-19175651)
chr1 (17-77)||(28038908-28038968)
chr1 (15-47)||(40328951-40328983)
chr1 (12-64)||(42468868-42468919)
chr1 (13-45)||(47293281-47293313)
[»] chr5 (68 HSPs)
chr5 (13-78)||(3851361-3851426)
chr5 (13-78)||(23914839-23914904)
chr5 (13-76)||(19531378-19531441)
chr5 (13-78)||(42013820-42013885)
chr5 (13-69)||(11262335-11262391)
chr5 (14-69)||(37944609-37944664)
chr5 (14-84)||(19531293-19531363)
chr5 (13-78)||(15712198-15712263)
chr5 (13-78)||(26300109-26300174)
chr5 (13-69)||(35969135-35969192)
chr5 (14-65)||(15712132-15712183)
chr5 (14-69)||(42013900-42013955)
chr5 (14-78)||(3851441-3851505)
chr5 (13-69)||(8961226-8961282)
chr5 (17-65)||(13157344-13157392)
chr5 (15-71)||(35969208-35969264)
chr5 (14-70)||(38835531-38835587)
chr5 (14-69)||(11262406-11262461)
chr5 (14-69)||(37944680-37944735)
chr5 (17-83)||(11795729-11795795)
chr5 (17-78)||(6763778-6763839)
chr5 (13-78)||(13311173-13311237)
chr5 (14-67)||(43446868-43446921)
chr5 (14-78)||(23914919-23914983)
chr5 (14-69)||(13157411-13157465)
chr5 (24-71)||(37870022-37870069)
chr5 (15-69)||(13311253-13311307)
chr5 (17-78)||(38835606-38835668)
chr5 (17-78)||(26300192-26300253)
chr5 (15-71)||(17625719-17625775)
chr5 (14-65)||(8961297-8961348)
chr5 (14-69)||(37870095-37870150)
chr5 (14-64)||(14064888-14064937)
chr5 (32-78)||(43447464-43447510)
chr5 (17-78)||(71257-71318)
chr5 (13-78)||(43506105-43506170)
chr5 (17-69)||(13654589-13654641)
chr5 (15-83)||(25408536-25408604)
chr5 (13-69)||(30893853-30893909)
chr5 (14-78)||(43506172-43506236)
chr5 (15-70)||(3100411-3100466)
chr5 (13-64)||(5226032-5226082)
chr5 (13-64)||(5226096-5226146)
chr5 (14-45)||(11172057-11172088)
chr5 (13-64)||(34186368-34186418)
chr5 (20-78)||(5259469-5259527)
chr5 (13-47)||(20367337-20367371)
chr5 (13-47)||(29807107-29807141)
chr5 (13-47)||(39126091-39126125)
chr5 (13-70)||(1098634-1098691)
chr5 (13-78)||(5259383-5259448)
chr5 (13-62)||(13356214-13356263)
chr5 (17-78)||(13391529-13391590)
chr5 (20-69)||(14153376-14153425)
chr5 (17-78)||(15549406-15549467)
chr5 (20-69)||(20518255-20518304)
chr5 (13-78)||(26141832-26141897)
chr5 (13-69)||(2673854-2673910)
chr5 (17-77)||(8717788-8717848)
chr5 (25-69)||(11172009-11172052)
chr5 (13-45)||(14416437-14416469)
chr5 (13-45)||(14571039-14571071)
chr5 (13-45)||(14571085-14571117)
chr5 (13-69)||(18652842-18652898)
chr5 (15-47)||(20362006-20362038)
chr5 (17-65)||(21945461-21945509)
chr5 (13-69)||(25792923-25792979)
chr5 (15-47)||(36137044-36137076)
[»] chr8 (46 HSPs)
chr8 (13-78)||(14381236-14381301)
chr8 (13-78)||(40098837-40098902)
chr8 (13-69)||(26014576-26014632)
chr8 (14-69)||(14381316-14381371)
chr8 (14-85)||(40098751-40098822)
chr8 (13-78)||(9056098-9056163)
chr8 (13-78)||(33574864-33574929)
chr8 (14-78)||(9056019-9056083)
chr8 (15-78)||(1739644-1739707)
chr8 (13-62)||(7377568-7377617)
chr8 (14-69)||(26014647-26014701)
chr8 (14-69)||(7377632-7377688)
chr8 (14-78)||(11692046-11692109)
chr8 (14-65)||(13211317-13211368)
chr8 (14-69)||(13228877-13228932)
chr8 (14-71)||(9808379-9808436)
chr8 (13-65)||(9808449-9808501)
chr8 (13-69)||(11295671-11295727)
chr8 (17-68)||(5888417-5888468)
chr8 (15-62)||(24418959-24419006)
chr8 (14-69)||(24820375-24820430)
chr8 (13-71)||(29451804-29451865)
chr8 (16-83)||(31810414-31810481)
chr8 (13-78)||(10934680-10934745)
chr8 (13-78)||(13964417-13964482)
chr8 (17-78)||(15232350-15232411)
chr8 (13-78)||(31505115-31505180)
chr8 (17-69)||(10117051-10117103)
chr8 (13-69)||(24820305-24820361)
chr8 (13-69)||(28882671-28882727)
chr8 (13-48)||(13228947-13228982)
chr8 (15-78)||(29424062-29424125)
chr8 (14-45)||(37716152-37716183)
chr8 (13-48)||(43483960-43483995)
chr8 (17-76)||(45045458-45045517)
chr8 (13-47)||(34194589-34194623)
chr8 (13-47)||(40716775-40716809)
chr8 (13-47)||(42631808-42631842)
chr8 (33-78)||(2810030-2810075)
chr8 (13-62)||(7484694-7484743)
chr8 (13-78)||(13211237-13211302)
chr8 (17-69)||(13841855-13841907)
chr8 (17-65)||(15285734-15285782)
chr8 (17-65)||(15466103-15466151)
chr8 (15-71)||(37716079-37716135)
chr8 (13-45)||(44282342-44282374)
[»] chr6 (43 HSPs)
chr6 (14-83)||(21506456-21506525)
chr6 (14-83)||(17773579-17773648)
chr6 (13-84)||(30397717-30397788)
chr6 (13-69)||(17773508-17773564)
chr6 (14-78)||(21998037-21998101)
chr6 (14-78)||(30397802-30397866)
chr6 (14-69)||(21998117-21998172)
chr6 (13-78)||(31536309-31536374)
chr6 (13-69)||(30460690-30460746)
chr6 (13-65)||(4844300-4844352)
chr6 (14-65)||(21506541-21506592)
chr6 (14-65)||(28577679-28577730)
chr6 (14-65)||(30460624-30460675)
chr6 (20-62)||(4844359-4844401)
chr6 (13-83)||(15718470-15718540)
chr6 (17-77)||(16121046-16121106)
chr6 (13-69)||(17268020-17268076)
chr6 (14-69)||(17268091-17268146)
chr6 (23-78)||(28577599-28577654)
chr6 (14-69)||(31536392-31536447)
chr6 (13-83)||(6560650-6560720)
chr6 (13-78)||(7158254-7158319)
chr6 (13-78)||(14310598-14310663)
chr6 (13-78)||(31398224-31398289)
chr6 (17-69)||(13281541-13281593)
chr6 (30-78)||(26527188-26527236)
chr6 (13-69)||(34379812-34379868)
chr6 (13-64)||(28034092-28034142)
chr6 (15-65)||(8363627-8363677)
chr6 (15-69)||(14173397-14173451)
chr6 (15-69)||(14177933-14177987)
chr6 (14-84)||(15836617-15836687)
chr6 (13-47)||(21478582-21478616)
chr6 (15-64)||(3012439-3012488)
chr6 (14-47)||(6047985-6048018)
chr6 (13-46)||(6048033-6048066)
chr6 (13-78)||(13276484-13276549)
chr6 (17-69)||(3203678-3203730)
chr6 (17-69)||(3203752-3203804)
chr6 (18-78)||(8146031-8146091)
chr6 (17-69)||(12383868-12383920)
chr6 (13-69)||(26527267-26527323)
chr6 (14-78)||(33053763-33053827)
[»] chr4 (60 HSPs)
chr4 (14-78)||(52817645-52817709)
chr4 (13-69)||(24941118-24941174)
chr4 (14-83)||(5281213-5281282)
chr4 (13-78)||(5418592-5418657)
chr4 (14-69)||(13689543-13689598)
chr4 (16-78)||(55087791-55087853)
chr4 (14-69)||(5418522-5418577)
chr4 (15-69)||(13689615-13689669)
chr4 (19-69)||(44156083-44156133)
chr4 (13-78)||(19934636-19934701)
chr4 (13-78)||(19934715-19934780)
chr4 (14-67)||(29223951-29224004)
chr4 (13-78)||(54164811-54164876)
chr4 (16-70)||(3504083-3504137)
chr4 (13-83)||(54164890-54164960)
chr4 (17-78)||(4370398-4370459)
chr4 (17-78)||(24941192-24941253)
chr4 (13-69)||(29006912-29006968)
chr4 (14-78)||(52817565-52817629)
chr4 (14-69)||(29006842-29006897)
chr4 (17-71)||(3511714-3511768)
chr4 (15-77)||(5535713-5535775)
chr4 (20-78)||(14450955-14451013)
chr4 (17-71)||(34616296-34616350)
chr4 (15-69)||(38382055-38382109)
chr4 (18-67)||(10031506-10031554)
chr4 (14-67)||(10031599-10031652)
chr4 (15-68)||(11796663-11796716)
chr4 (13-78)||(49481957-49482022)
chr4 (17-69)||(20598264-20598316)
chr4 (13-64)||(9011822-9011872)
chr4 (13-64)||(31860664-31860714)
chr4 (13-48)||(44639823-44639858)
chr4 (13-64)||(45861082-45861132)
chr4 (15-62)||(47181638-47181685)
chr4 (15-62)||(48402425-48402472)
chr4 (15-62)||(56364340-56364387)
chr4 (13-47)||(5289731-5289765)
chr4 (17-67)||(6243706-6243756)
chr4 (12-70)||(19878292-19878350)
chr4 (15-69)||(22020123-22020177)
chr4 (13-47)||(43635865-43635899)
chr4 (17-71)||(47308119-47308173)
chr4 (13-47)||(50038479-50038513)
chr4 (13-47)||(50045701-50045735)
chr4 (14-64)||(53684863-53684912)
chr4 (15-69)||(54106482-54106536)
chr4 (20-78)||(56328534-56328592)
chr4 (32-69)||(2198055-2198092)
chr4 (13-78)||(20215565-20215630)
chr4 (32-69)||(22720602-22720639)
chr4 (17-54)||(29224012-29224049)
chr4 (13-62)||(35005132-35005181)
chr4 (17-62)||(36786164-36786209)
chr4 (13-69)||(4044375-4044431)
chr4 (14-62)||(6462726-6462774)
chr4 (15-47)||(11583786-11583818)
chr4 (13-45)||(20542834-20542866)
chr4 (13-45)||(34827549-34827581)
chr4 (13-69)||(55936064-55936120)
[»] chr3 (72 HSPs)
chr3 (14-69)||(33412543-33412598)
chr3 (14-69)||(42449112-42449167)
chr3 (13-67)||(50260942-50260996)
chr3 (14-84)||(51617323-51617393)
chr3 (14-84)||(52315468-52315538)
chr3 (13-83)||(51617408-51617478)
chr3 (14-63)||(33412478-33412527)
chr3 (13-66)||(52315400-52315453)
chr3 (14-78)||(51239321-51239385)
chr3 (14-65)||(36362682-36362733)
chr3 (13-78)||(21403973-21404036)
chr3 (13-78)||(41349737-41349803)
chr3 (14-71)||(22173800-22173857)
chr3 (13-78)||(29720153-29720218)
chr3 (13-78)||(38455163-38455228)
chr3 (13-78)||(52168281-52168346)
chr3 (14-78)||(29565107-29565171)
chr3 (14-78)||(41349658-41349722)
chr3 (13-69)||(52931648-52931704)
chr3 (14-78)||(52931751-52931815)
chr3 (14-76)||(21403897-21403958)
chr3 (14-83)||(17552470-17552539)
chr3 (13-78)||(36362602-36362667)
chr3 (13-78)||(51239241-51239306)
chr3 (13-78)||(52168360-52168425)
chr3 (13-65)||(29565186-29565238)
chr3 (14-78)||(29720074-29720138)
chr3 (14-78)||(38455243-38455307)
chr3 (14-69)||(22099786-22099841)
chr3 (13-71)||(18940046-18940104)
chr3 (13-66)||(29720226-29720279)
chr3 (14-70)||(18939969-18940025)
chr3 (15-78)||(26367469-26367532)
chr3 (17-83)||(12744894-12744960)
chr3 (13-55)||(17552554-17552596)
chr3 (13-67)||(29512208-29512262)
chr3 (14-83)||(50261011-50261081)
chr3 (13-78)||(25881213-25881278)
chr3 (14-71)||(29512137-29512193)
chr3 (13-69)||(2128438-2128494)
chr3 (13-69)||(8439265-8439321)
chr3 (13-69)||(12744978-12745034)
chr3 (13-69)||(54595797-54595853)
chr3 (13-64)||(26367552-26367603)
chr3 (13-64)||(29076602-29076652)
chr3 (15-78)||(41254010-41254073)
chr3 (14-45)||(52931719-52931750)
chr3 (15-69)||(21217245-21217299)
chr3 (17-67)||(24075526-24075576)
chr3 (13-47)||(32589344-32589378)
chr3 (14-68)||(42449183-42449237)
chr3 (13-47)||(42595814-42595848)
chr3 (15-69)||(44382891-44382945)
chr3 (14-55)||(3972489-3972530)
chr3 (14-55)||(3994564-3994605)
chr3 (14-55)||(3997348-3997389)
chr3 (17-78)||(10872753-10872814)
chr3 (16-69)||(21217173-21217226)
chr3 (17-62)||(29241561-29241606)
chr3 (14-71)||(32759044-32759101)
chr3 (17-62)||(37897696-37897741)
chr3 (12-69)||(50603589-50603646)
chr3 (13-78)||(52215957-52216022)
chr3 (14-47)||(54680518-54680551)
chr3 (18-62)||(1086591-1086635)
chr3 (17-69)||(12568465-12568517)
chr3 (17-69)||(13544929-13544981)
chr3 (17-69)||(26104781-26104833)
chr3 (14-78)||(30519676-30519740)
chr3 (15-71)||(31706618-31706674)
chr3 (31-71)||(39579588-39579628)
chr3 (16-64)||(40628746-40628793)
[»] chr2 (71 HSPs)
chr2 (13-78)||(5574187-5574252)
chr2 (17-78)||(34248496-34248557)
chr2 (15-69)||(34248422-34248476)
chr2 (14-83)||(38598018-38598087)
chr2 (15-83)||(3887826-3887894)
chr2 (14-78)||(3887911-3887975)
chr2 (14-78)||(38594422-38594486)
chr2 (13-69)||(43426635-43426691)
chr2 (16-69)||(6566995-6567048)
chr2 (13-69)||(30902350-30902406)
chr2 (14-69)||(1981062-1981117)
chr2 (13-78)||(1980983-1981048)
chr2 (14-67)||(30902282-30902335)
chr2 (13-78)||(38594342-38594407)
chr2 (13-78)||(38597938-38598003)
chr2 (14-78)||(5574108-5574172)
chr2 (17-69)||(20504250-20504302)
chr2 (15-66)||(3714223-3714274)
chr2 (15-69)||(27331838-27331892)
chr2 (15-69)||(44274620-44274674)
chr2 (13-69)||(22373687-22373744)
chr2 (15-71)||(13333452-13333508)
chr2 (14-78)||(38618176-38618240)
chr2 (14-78)||(43426706-43426770)
chr2 (14-85)||(14308650-14308721)
chr2 (14-65)||(25278185-25278236)
chr2 (15-69)||(25270863-25270917)
chr2 (13-74)||(1961386-1961447)
chr2 (14-71)||(3714291-3714347)
chr2 (17-62)||(26003516-26003561)
chr2 (21-69)||(7837092-7837140)
chr2 (17-69)||(22373617-22373669)
chr2 (15-67)||(26836234-26836286)
chr2 (13-69)||(31024178-31024234)
chr2 (17-69)||(38465870-38465922)
chr2 (15-71)||(41056893-41056949)
chr2 (15-78)||(14308725-14308788)
chr2 (17-48)||(20504324-20504355)
chr2 (15-70)||(41824267-41824322)
chr2 (15-69)||(3123982-3124036)
chr2 (17-71)||(11342051-11342105)
chr2 (20-78)||(19612939-19612997)
chr2 (13-83)||(24457093-24457163)
chr2 (13-47)||(27743693-27743727)
chr2 (13-83)||(38465782-38465852)
chr2 (13-47)||(42579096-42579130)
chr2 (14-47)||(921845-921878)
chr2 (16-69)||(3098206-3098259)
chr2 (25-78)||(3121511-3121564)
chr2 (20-69)||(8740526-8740575)
chr2 (17-78)||(15119858-15119919)
chr2 (17-62)||(15859632-15859677)
chr2 (15-64)||(17866259-17866308)
chr2 (14-47)||(20195318-20195351)
chr2 (13-62)||(21183404-21183453)
chr2 (16-69)||(25270936-25270989)
chr2 (13-46)||(28680916-28680949)
chr2 (14-47)||(29771747-29771780)
chr2 (16-69)||(41056968-41057021)
chr2 (17-69)||(6566922-6566974)
chr2 (13-69)||(15119784-15119840)
chr2 (13-65)||(21488104-21488156)
chr2 (17-69)||(23143567-23143619)
chr2 (17-69)||(23555357-23555409)
chr2 (13-45)||(32473502-32473534)
chr2 (13-45)||(36490510-36490542)
chr2 (17-85)||(38181841-38181909)
chr2 (43-71)||(38618119-38618147)
chr2 (13-69)||(41824337-41824393)
chr2 (13-69)||(44587720-44587776)
chr2 (15-71)||(45472415-45472471)
[»] scaffold0024 (2 HSPs)
scaffold0024 (13-85)||(120136-120208)
scaffold0024 (14-78)||(120223-120287)
[»] chr7 (67 HSPs)
chr7 (14-78)||(38238862-38238926)
chr7 (14-78)||(46943942-46944006)
chr7 (14-69)||(25079214-25079269)
chr7 (13-83)||(29498776-29498846)
chr7 (17-78)||(34703524-34703585)
chr7 (17-69)||(40416987-40417039)
chr7 (14-69)||(25079285-25079340)
chr7 (15-69)||(4406424-4406478)
chr7 (13-78)||(38238781-38238847)
chr7 (14-83)||(22106745-22106814)
chr7 (14-83)||(40529537-40529606)
chr7 (13-69)||(22106674-22106730)
chr7 (14-78)||(27554575-27554639)
chr7 (13-69)||(40529621-40529677)
chr7 (13-83)||(6455626-6455696)
chr7 (15-69)||(21387583-21387637)
chr7 (14-67)||(716312-716365)
chr7 (12-77)||(2456335-2456400)
chr7 (14-78)||(1706831-1706895)
chr7 (17-69)||(1706914-1706966)
chr7 (13-69)||(41872128-41872184)
chr7 (13-69)||(45000678-45000734)
chr7 (14-69)||(18234423-18234478)
chr7 (17-76)||(22281443-22281502)
chr7 (14-65)||(29498861-29498912)
chr7 (13-67)||(24936610-24936664)
chr7 (30-78)||(4407713-4407761)
chr7 (14-78)||(40416904-40416968)
chr7 (14-65)||(7430962-7431013)
chr7 (14-69)||(27554504-27554559)
chr7 (14-65)||(34703454-34703505)
chr7 (15-65)||(46944016-46944066)
chr7 (15-68)||(7701267-7701320)
chr7 (13-78)||(12274807-12274872)
chr7 (13-78)||(25245220-25245285)
chr7 (14-63)||(45000614-45000663)
chr7 (13-69)||(2943219-2943275)
chr7 (13-69)||(34275198-34275254)
chr7 (14-65)||(24936544-24936595)
chr7 (14-69)||(31417595-31417650)
chr7 (15-62)||(34840628-34840675)
chr7 (13-47)||(3498323-3498357)
chr7 (20-78)||(6455547-6455605)
chr7 (11-69)||(10599067-10599125)
chr7 (15-69)||(11602846-11602900)
chr7 (15-65)||(22281522-22281572)
chr7 (21-83)||(24935885-24935947)
chr7 (15-69)||(25774261-25774315)
chr7 (13-59)||(43813202-43813248)
chr7 (15-69)||(46022555-46022609)
chr7 (12-69)||(3967781-3967838)
chr7 (13-78)||(4406077-4406142)
chr7 (16-69)||(7701195-7701248)
chr7 (13-78)||(10095717-10095782)
chr7 (13-78)||(10415016-10415081)
chr7 (17-78)||(15051081-15051142)
chr7 (13-78)||(28949352-28949417)
chr7 (14-47)||(46658810-46658843)
chr7 (17-45)||(716265-716293)
chr7 (15-67)||(8169175-8169227)
chr7 (15-47)||(20353156-20353188)
chr7 (17-69)||(23818431-23818483)
chr7 (17-69)||(24280902-24280954)
chr7 (17-69)||(31813418-31813470)
chr7 (13-45)||(33471521-33471553)
chr7 (17-45)||(36427748-36427776)
chr7 (13-65)||(41508687-41508738)
[»] scaffold0039 (2 HSPs)
scaffold0039 (13-71)||(54465-54523)
scaffold0039 (17-67)||(54397-54447)
[»] scaffold0047 (2 HSPs)
scaffold0047 (14-83)||(61156-61225)
scaffold0047 (13-78)||(61239-61304)
[»] scaffold0007 (2 HSPs)
scaffold0007 (13-69)||(246802-246858)
scaffold0007 (17-78)||(246876-246937)
[»] scaffold0536 (2 HSPs)
scaffold0536 (13-78)||(3948-4013)
scaffold0536 (14-78)||(4028-4092)
[»] scaffold0027 (1 HSPs)
scaffold0027 (14-78)||(17165-17228)
[»] scaffold0236 (1 HSPs)
scaffold0236 (13-47)||(13724-13758)
[»] scaffold0009 (1 HSPs)
scaffold0009 (20-69)||(7741-7790)
[»] scaffold0200 (1 HSPs)
scaffold0200 (16-64)||(22315-22362)
[»] scaffold0020 (1 HSPs)
scaffold0020 (13-69)||(139373-139429)


Alignment Details
Target: chr1 (Bit Score: 271; Significance: 1e-151; HSPs: 89)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 13 - 311
Target Start/End: Complemental strand, 17490551 - 17490253
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctattatgtgtatttgatcatggttgatagctct 112  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  17490551 ccacatatatcattaattaaatgtatctaaaaagtggatttttgcttatattagtgaccggagggtctattatgtgtatttgatcatggttgatagctct 17490452  T
Q  113 atttttaatgctgcttaatcccatttaggcacaagttacaatatttcaaagtgatttatccaaatatctcagtgtacatttaacttgagttagatgcatt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17490451 atttttaatgctgcttaatcccatttaggcacaagttacaatatttcaaagtgatttatccaaatatctcagtgtacatttaacttgagttagatgcatt 17490352  T
Q  213 aggcttgggcaactgtttgcgtgctcaaaatttgtatttaatttgactgtaagtgtacatttgaccggctattgtcagttactaggtccataatttagc 311  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17490351 aggcttgggcaactgtttgcttgctcaaaatttgtatttaatttgattgtaagtgtacatttgaccggctattgtcagttactatgtccataatttagc 17490253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 639862 - 639797
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  639862 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggt 639797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 33604068 - 33604133
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  33604068 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggt 33604133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 48022658 - 48022593
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  48022658 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggt 48022593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 37734853 - 37734920
Alignment:
Q  16 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||    
T  37734853 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggtgtatt 37734920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 6065538 - 6065603
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||    
T  6065538 ccacatacatcattaattgaatgtatctaaagagtggatttttgcttatattagtgaccggagggt 6065603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 8258020 - 8258085
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||    
T  8258020 ccacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtgaccggagggt 8258085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 31008338 - 31008401
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||    
T  31008338 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattaatgaccggagggt 31008401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 5856434 - 5856492
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5856434 ccacatacataattaattgaatgtatttaaaaagtggatttttgcttatattagtgatc 5856492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 23944100 - 23944035
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | ||||||    
T  23944100 ccacatacatcattaattgaatgtatctaaaaaatgaatttttgcttatattagtgaccggagggt 23944035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 27206820 - 27206767
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtg 68  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27206820 acatacatcattaattgaatgtatctaaaaagtggttttttgcttatattagtg 27206767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 31008322 - 31008257
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| | ||||||    
T  31008322 ccacatacatcattaattaaatgtatctaaaaagtagatttttgcttatattagtgaccggagggt 31008257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 3384285 - 3384221
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| | ||||||    
T  3384285 cacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattaatgaccggagggt 3384221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 35367556 - 35367620
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| | ||||||    
T  35367556 cacatacatcattaattgaatgtatctaaaaaatggatttttgcttatagtagtgaccggagggt 35367620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 37734835 - 37734780
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  37734835 cacatacatcattaattgaatgtatcttaaaagtgaatttttgcttatattagtga 37734780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 27206839 - 27206901
Alignment:
Q  16 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| | ||||||    
T  27206839 catacatcattaattgaatgtatctaaatagttgatttttgcttatattagtgaccggagggt 27206901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 4060234 - 4060178
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||    
T  4060234 ccacatatattattaattgaatatatctaaaaagtggatttttgcttatattagtga 4060178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 6065523 - 6065459
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||| |||||||||||||||||||||||||||| || |||||||||||||||||| | ||||||    
T  6065523 cacatccatcattaattgaatgtatctaaaaagtagaattttgcttatattagtgaccggagggt 6065459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 8258005 - 8257941
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||| | ||||||    
T  8258005 cacatacattattaattgaatgtatctaaaaagtgaatttttgcttatatttgtgaccggagggt 8257941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 14418135 - 14418199
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||| ||| | ||||||    
T  14418135 cacatacatcattagttgaatgtatctaaaaagtgaatttttgcttatattaatgaccggagggt 14418199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 2349818 - 2349763
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  2349818 cacatgcatcattaattgaatgtatctaaaaaatggatttttgtttatattagtga 2349763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 4602706 - 4602651
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  4602706 cacatatatcattaattgaatgtatctaaaaagtggaattttgtttatattagtga 4602651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 34658448 - 34658393
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  34658448 cacatacatcattaattaaatgtatctgaaaagtgaatttttgcttatattagtga 34658393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 40262530 - 40262475
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||    
T  40262530 cacatacatcattaattgaatatatctaaaaactggatttttgtttatattagtga 40262475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 2352973 - 2353030
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    ||||||||||||||||| |||||||||||||| |  ||||||||||||||||||||||    
T  2352973 cacatacatcattaattaaatgtatctaaaaaataaatttttgcttatattagtgatc 2353030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 4060252 - 4060313
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||| || |||||||||||||||| ||||||||||||||||||||| | ||||||    
T  4060252 atacatcattagttaaatgtatctaaaaagtagatttttgcttatattagtgaccggagggt 4060313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 639877 - 639941
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| | ||||||    
T  639877 cacatacatccttaaatgaatgtatcttaaaagtgaatttttgcttatattagtgaccggagggt 639941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 1035948 - 1035892
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    |||||||||||| |||||||| ||||| ||| |||||||||||||||||||||||||    
T  1035948 acatacatcatttattgaatgaatctagaaactggatttttgcttatattagtgatc 1035892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 4602721 - 4602777
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||| ||||||||||||||||||||||||| || |||||| |||||||||||||    
T  4602721 ccacatatatcattaattgaatgtatctaaaaaatgaatttttacttatattagtga 4602777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 5431417 - 5431473
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| |||||||| |||||||||||  ||||||||||||||||||||    
T  5431417 ccacatacatcatttattgaatgaatctaaaaagttaatttttgcttatattagtga 5431473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 19175665 - 19175721
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||    
T  19175665 ccacatacatcatttattgaatgaatctaaaaagtagatttttgcttataatagtga 19175721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 48022673 - 48022737
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| | ||||||    
T  48022673 cacatacatccttaaatgaatgtatcttaaaagtgaatttttgcttatattagtgaccggagggt 48022737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 3384301 - 3384356
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||| |||||||||||||||||||||| ||||||  ||||||||||||    
T  3384301 cacatacatcatcaattgaatgtatctaaaaagtgaatttttatttatattagtga 3384356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 1035967 - 1036029
Alignment:
Q  16 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||| ||||||||||||||| ||||| |||||| |||||||||||||||||||| | ||||||    
T  1035967 cataaatcattaattgaatgaatctagaaagtgaatttttgcttatattagtgaccggagggt 1036029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 10256844 - 10256786
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    |||||||||||||| |||||||| |||||||||||| |||||| |||||| ||||||||    
T  10256844 ccacatacatcatttattgaatgaatctaaaaagtgaattttttcttataatagtgatc 10256786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 34597583 - 34597525
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    ||||||||||||||  ||||||| |||||||||||| ||||||||||||| ||||||||    
T  34597583 ccacatacatcatttgttgaatgaatctaaaaagtgaatttttgcttataatagtgatc 34597525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 40262545 - 40262608
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||| ||||||| ||||  |||||||||||||||||||||||| | ||||||    
T  40262545 ccacatacatcattaattaaatgtatttaaa--gtggatttttgcttatattagtgaccggagggt 40262608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 15439939 - 15439991
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    |||||||||| ||||||||||||||| ||||||||  ||||||||||||||||    
T  15439939 ccacatacattattaattgaatgtatttaaaaagtcaatttttgcttatatta 15439991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 33604053 - 33603989
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||| |||| ||||||||||| ||||||| ||||||| |||||||||||| | ||||||    
T  33604053 cacatacatccttaaatgaatgtatcttaaaagtgaatttttgtttatattagtgaccggagggt 33603989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 52923401 - 52923465
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||| |||||||| | ||||||||| |||||||||||||| |||||| | ||||||    
T  52923401 cacatacatcatttattgaatgaacctaaaaagtagatttttgcttataatagtgacctgagggt 52923465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 2349835 - 2349890
Alignment:
Q  15 acatacatcattaattgaatgtatct-aaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||||||| ||||| | ||||||| |||||||||||||    
T  2349835 acatacatcattaattgaatgtatctaaaaaaatagatttttacttatattagtga 2349890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 15439924 - 15439869
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||| ||||||||||||||||||||| ||| | |||||||| ||||||||||||    
T  15439924 cacatatatcattaattgaatgtatctacaaaatagatttttgtttatattagtga 15439869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 2352954 - 2352916
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggattttt 55  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  2352954 atacgtcattaattgaatgtatctaaaaagtggattttt 2352916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 5431402 - 5431348
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||| ||||| |||||||| |||||||||||| ||||||||||||| ||||||    
T  5431402 acatacttcatttattgaatgaatctaaaaagtgaatttttgcttataatagtga 5431348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 6079142 - 6079196
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||| |||||||| |||||||| |||||||||| |||||| ||||||    
T  6079142 acatacatcatttattgaatgaatctaaaaggtggattttttcttataatagtga 6079196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 6156693 - 6156639
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    |||||||||| |||||||| ||||||||||| |||||||| ||||| ||||||||    
T  6156693 atacatcatttattgaatgaatctaaaaagttgatttttgtttataatagtgatc 6156639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 15351792 - 15351857
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||| |||||||| ||||||||  | |||||||||||||||| |||| | ||||||    
T  15351792 ccacatacatcatttattgaatgaatctaaaacatagatttttgcttatatttgtgaccagagggt 15351857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 34597590 - 34597639
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttata 62  Q
    ||||||||||||||  ||||||| |||||||||||| |||||||||||||    
T  34597590 ccacatacatcatttgttgaatgaatctaaaaagtgaatttttgcttata 34597639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 34953977 - 34954038
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||| ||||||||  |  ||||||||||||| |||||||| ||||||    
T  34953977 atacatcattaattgaatgaatctaaaatataaatttttgcttataatagtgatcggagggt 34954038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 36040209 - 36040144
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||| |||||| | |||||| || | ||||||||||||||||||| | ||||||    
T  36040209 ccacatacatcattaaatgaatgaacctaaaatgtagttttttgcttatattagtgaccggagggt 36040144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 48
Target Start/End: Complemental strand, 36535750 - 36535717
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtg 48  Q
    ||||||||||||||||||||||||||||||||||    
T  36535750 acatacatcattaattgaatgtatctaaaaagtg 36535717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 52923386 - 52923321
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||| |||||||| | |||||||||| | ||||||||||| |||||| | ||||||    
T  52923386 ccacatacatcatttattgaatgaacctaaaaagtgaaattttgcttataatagtgaccggagggt 52923321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 2122646 - 2122702
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||| |||| | |||||| ||||||||| |||||||||||||||| ||||||    
T  2122646 ccacatacaacatttaatgaatgaatctaaaaaatggatttttgcttataatagtga 2122702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 6283612 - 6283668
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||| |||||| | |||||| || | |||||||||||||||||||    
T  6283612 ccacatacatcattaaatgaatgaacctaaaatgtagttttttgcttatattagtga 6283668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 14214603 - 14214543
Alignment:
Q  23 cattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||| | |||||| ||||    
T  14214603 cattaattgaatgaacctaaaaagtgaatttttgcttataatagtgaccggagggtgtatt 14214543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 14967303 - 14967359
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgat 70  Q
    ||||||||||||| | |||||| |||||||| || |||||||||||||| |||||||    
T  14967303 cacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgat 14967359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 35367018 - 35366962
Alignment:
Q  29 ttgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctattat 85  Q
    ||||||||||||||||| | |||||||  |||||||||||||| |||||| ||||||    
T  35367018 ttgaatgtatctaaaaattagatttttatttatattagtgatcggagggtgtattat 35366962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 52112939 - 52112883
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| |||||||| || ||||||||| | ||||||||||| ||||||    
T  52112939 ccacatacatcatttattgaatgaatataaaaagtgaacttttgcttataatagtga 52112883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 9135595 - 9135645
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 64  Q
    |||||||||||||||| |||||| ||||||||||| || |||||||||||||    
T  9135595 ccacatacatcattaaatgaatgaatctaaaaagt-gaattttgcttatatt 9135645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 15057720 - 15057657
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagg 76  Q
    |||||||||||| | ||| |||| ||||||||||| | |||||||||||| |||||||| ||||    
T  15057720 ccacatacatcactcattcaatgaatctaaaaagtagttttttgcttataatagtgatcggagg 15057657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 45925307 - 45925257
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 64  Q
    |||||||||||||||| |||||| ||||||||||| || |||||||||||||    
T  45925307 ccacatacatcattaaatgaatgaatctaaaaagt-gaattttgcttatatt 45925257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 46906940 - 46906987
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttata 62  Q
    |||||||||||| | ||||||||||||||| || ||||||||||||||    
T  46906940 acatacatcatttaatgaatgtatctaaaacgttgatttttgcttata 46906987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 3549834 - 3549788
Alignment:
Q  21 atcattaattgaatgtatctaaaaagtggatttttgcttatattagt 67  Q
    ||||||||||||||| |||||||| || |||||||||||||| ||||    
T  3549834 atcattaattgaatgaatctaaaatgtagatttttgcttataatagt 3549788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 3606324 - 3606290
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  3606324 ccacatacatcattaattgaatgaatctaaaaagt 3606290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 8338731 - 8338673
Alignment:
Q  20 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||| |||||| |||||||| || |||||||||||||| |||||| | ||||||    
T  8338731 catcattaaatgaatgaatctaaaatgtagatttttgcttataatagtgaccggagggt 8338673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 19580249 - 19580183
Alignment:
Q  11 atccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgaggg 77  Q
    |||||||||||||||| |||||||| || | ||||||  ||||||||||||| | |||||| |||||    
T  19580249 atccacatacatcatttattgaatgaattttaaaagtcaatttttgcttataatcgtgatcggaggg 19580183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 24981902 - 24981848
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||| | ||||||||||||||| ||  ||||||||||||| ||||||    
T  24981902 acatacatcatttaatgaatgtatctaaaacgttaatttttgcttataatagtga 24981848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 34658463 - 34658513
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatat 63  Q
    |||||||||| ||||||||||||||| |||||| | || ||||||||||||    
T  34658463 ccacatacattattaattgaatgtatttaaaaaatagaattttgcttatat 34658513  T

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Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 37255189 - 37255155
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  37255189 ccacatacatcattaattgaatgaatctaaaaagt 37255155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 39181112 - 39181078
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  39181112 ccacatacatcattaattgaatgaatctaaaaagt 39181078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 39940565 - 39940627
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgaggg 77  Q
    |||||||| ||| |||||||| |||||||||||  |||||| |||||| |||||||| |||||    
T  39940565 acatacattatttattgaatgaatctaaaaagtaaatttttacttataatagtgatcggaggg 39940627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 45115254 - 45115312
Alignment:
Q  20 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||| |||||| |||||||| || |||||||||||||| |||||| | ||||||    
T  45115254 catcattaaatgaatgaatctaaaatgtagatttttgcttataatagtgaccggagggt 45115312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 46412769 - 46412835
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    ||||||||||||||||||| ||| |||| ||  |||||| |||||| |||||||| |||||| ||||    
T  46412769 atacatcattaattgaatgaatccaaaatgtaaatttttacttataatagtgatcggagggtgtatt 46412835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 1409129 - 1409182
Alignment:
Q  16 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||| |||||||| ||||||||||   ||||||||||||| ||||||    
T  1409129 catacatcatttattgaatgaatctaaaaagataatttttgcttataatagtga 1409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 7230070 - 7230022
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 64  Q
    ||||||||||||||||||||| |||||||||||  | |||||||||||||    
T  7230070 acatacatcattaattgaatgaatctaaaaagt-taattttgcttatatt 7230022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 12447532 - 12447565
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagt 47  Q
    |||||||||||||||||||||| |||||||||||    
T  12447532 cacatacatcattaattgaatgaatctaaaaagt 12447565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 21305096 - 21305051
Alignment:
Q  20 catcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    |||||||||||||||||||||||||| || ||||||  ||||||||    
T  21305096 catcattaattgaatgtatctaaaaaatgaatttttatttatatta 21305051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 24981921 - 24981974
Alignment:
Q  16 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  24981921 catacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 24981974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 45115233 - 45115168
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||| |||||||| |||||  | ||||||  | ||||||||||||||||||||||| ||||||    
T  45115233 ccacatatatcattaaatgaataaacctaaaatatagatttttgcttatattagtgatcggagggt 45115168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 50550197 - 50550262
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtc 79  Q
    ||||||||||||| | |||||| |||||||| || |||||||  ||||| |||||||| |||||||    
T  50550197 cacatacatcatttaatgaatgaatctaaaatgttgatttttctttataatagtgatcggagggtc 50550262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 45
Target Start/End: Complemental strand, 52879948 - 52879915
Alignment:
Q  12 tccacatacatcattaattgaatgtatctaaaaa 45  Q
    |||||||||||||||||||||||| |||||||||    
T  52879948 tccacatacatcattaattgaatgaatctaaaaa 52879915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 4974122 - 4974173
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    |||||||||||||||| |||||| |||||||||||  | ||||||||||||||    
T  4974122 ccacatacatcattaaatgaatgaatctaaaaagt-caattttgcttatatta 4974173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 13288411 - 13288467
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| |||||||  || || |||||| ||||||||||||| ||||||    
T  13288411 ccacatacatcatttattgaataaatttataaagtgcatttttgcttataatagtga 13288467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 14214607 - 14214671
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||| |||||||| | |||||||||   |||||||||||| |||||| | ||||||    
T  14214607 cacatacatcatttattgaatgaacctaaaaagtaagtttttgcttataatagtgaccggagggt 14214671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 19175651 - 19175595
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| |||||||| | |||||||||| | |||| |||||| ||||||    
T  19175651 ccacatacatcatttattgaatgaacctaaaaagtgaaattttacttataatagtga 19175595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 28038908 - 28038968
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgaggg 77  Q
    |||||||||| | | |||| ||||||||||| |||||||||||||| |||| ||| |||||    
T  28038908 atacatcatttaataaatgaatctaaaaagttgatttttgcttataatagtaatcggaggg 28038968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 40328951 - 40328983
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||| |||||||||||    
T  40328951 acatacatcattaattgaatgaatctaaaaagt 40328983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 42468919 - 42468868
Alignment:
Q  12 tccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 64  Q
    ||||||||||||||||| |||||| | ||||||||| || |||||||||||||    
T  42468919 tccacatacatcattaaatgaatgaacctaaaaagt-gaattttgcttatatt 42468868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 47293313 - 47293281
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaa 45  Q
    ||||||||||||||||||||||| |||||||||    
T  47293313 ccacatacatcattaattgaatgaatctaaaaa 47293281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 9e-27; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 3851426 - 3851361
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3851426 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatcggagggt 3851361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 23914904 - 23914839
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  23914904 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggt 23914839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 19531378 - 19531441
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagg 76  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  19531378 ccacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtgatcggagg 19531441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 42013885 - 42013820
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||    
T  42013885 ccacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtgaccggagggt 42013820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 11262391 - 11262335
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11262391 ccacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtga 11262335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 37944664 - 37944609
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37944664 cacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtga 37944609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 19531363 - 19531293
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatta 84  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | |||||| |||||    
T  19531363 cacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatatttgtgaccggagggtgtatta 19531293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 15712198 - 15712263
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||||    
T  15712198 ccacatacatcattaattgaatgtatttaaaaagttgatttttgcttatattaatgatcggagggt 15712263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 26300174 - 26300109
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| | ||||||    
T  26300174 ccacatacatcattaattgaatgtatctaaaaagtaaatttttgcttatattagtgaccggagggt 26300109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 35969192 - 35969135
Alignment:
Q  13 ccacatacatcattaatt-gaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  35969192 ccacatacatcattaatttgaatgtatctaaaaagtggatttttgcttatattagtga 35969135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 15712183 - 15712132
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15712183 cacatacatcattaattgaatgtatctaaaaaatggatttttgcttatatta 15712132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 42013900 - 42013955
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  42013900 cacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatatttgtga 42013955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 3851441 - 3851505
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||| |||||||||||||| || |||||||||||||||||||| | ||||||    
T  3851441 cacatacatcattaattaaatgtatctaaaaaatgaatttttgcttatattagtgaccggagggt 3851505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 8961282 - 8961226
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  8961282 ccacatacattattaattgaatgtatctaaagagtgaatttttgcttatattagtga 8961226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 13157392 - 13157344
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13157392 atacatcattaattgaatatatctaaaaagtggatttttgcttatatta 13157344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 35969208 - 35969264
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    ||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  35969208 acatacaccattaattgaatgtatctaaaaagtgaatttttacttatattagtgatc 35969264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 38835587 - 38835531
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgat 70  Q
    ||||||||||||||||| |||||||||||||| || |||||||||||||||||||||    
T  38835587 cacatacatcattaattaaatgtatctaaaaaatgaatttttgcttatattagtgat 38835531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 11262406 - 11262461
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  11262406 cacatacatcattaattgaatgtatctacaaaatgaatttttgcttatattagtga 11262461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 37944680 - 37944735
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  37944680 cacatacatcattaattgaatgtatctaaaaaataaatttttgcttatattagtga 37944735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 11795795 - 11795729
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    ||||||||||||||||||| |||||||| || ||||||||||||||||||||| | |||||| ||||    
T  11795795 atacatcattaattgaatgaatctaaaatgttgatttttgcttatattagtgaccggagggtatatt 11795729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 6763778 - 6763839
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| | ||||||    
T  6763778 atacatcattaattgaatgaatctagaaaatggatttttgcttatattagtgaccggagggt 6763839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 13311237 - 13311173
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||| |||||| || |||||||||||||||||| | ||||||    
T  13311237 ccacatacatcattaattgaatgtatct-aaaagtagacttttgcttatattagtgaccggagggt 13311173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 43446921 - 43446868
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 67  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||||||||||||    
T  43446921 cacatacatcattaattaaatgtatctaaaaagtaaatttttgcttatattagt 43446868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 23914919 - 23914983
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| | ||||||    
T  23914919 cacatacatccttaaatgaatgtatcttaaaagtgaatttttgcttatattagtgaccggagggt 23914983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 13157411 - 13157465
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||    
T  13157411 cacatacatcattaattgaatgttt-taaaaagtgaatttttgcttatattagtga 13157465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 37870069 - 37870022
Alignment:
Q  24 attaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||    
T  37870069 attaattgaatgtatctaaaaaatggttttttgcttatattagtgatc 37870022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 13311253 - 13311307
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||||||||||||||  | ||||||| |||||||||||||    
T  13311253 acatacatcattaattgaatgtatctaaaagatagatttttacttatattagtga 13311307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 38835606 - 38835668
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtgga-tttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||| | ||||||    
T  38835606 atacatcattaattgaatgtatttaaaaagtgaattttttgcttatattagtgaccagagggt 38835668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 26300192 - 26300253
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||||||  | |||| ||||||||||||| | ||||||    
T  26300192 atacatcattaattgaatgtatctaaaaagtaaaattttacttatattagtgaccggagggt 26300253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 17625719 - 17625775
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    |||||||||||| | ||||||||||||||| || |||||||||||||| ||||||||    
T  17625719 acatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtgatc 17625775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 8961297 - 8961348
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    ||||||||||||||||||||||||| |||| ||| |||||||| ||||||||    
T  8961297 cacatacatcattaattgaatgtatttaaacagtagatttttgtttatatta 8961348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 37870095 - 37870150
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||| ||||||||||||||| ||||||||||   |||||||||||||||||||||    
T  37870095 cacattcatcattaattgaatatatctaaaaatgagatttttgcttatattagtga 37870150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 14064888 - 14064937
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 64  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||||||    
T  14064888 cacatacatcattaattgaatgaatctaaaaagt-aatttttgcttatatt 14064937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 43447464 - 43447510
Alignment:
Q  32 aatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||| |||||||||||||||||||| | ||||||    
T  43447464 aatgtatctaaaaagtgaatttttgcttatattagtgaccggagggt 43447510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 71318 - 71257
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||| ||||||||  | |||||||||||||| |||||| | ||||||    
T  71318 atacatcattaattgaatgaatctaaaatatagatttttgcttataatagtgaccggagggt 71257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 43506170 - 43506105
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||| | ||| || |||||||||||| | ||||||||||| |||||| ||||||||    
T  43506170 ccacatacatcatttaatgattgaatctaaaaagtgaaattttgcttataatagtgacccgagggt 43506105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 13654589 - 13654641
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||| |||||||| || ||||||||| ||||||||||||| ||||||    
T  13654589 atacatcatttattgaatgaatttaaaaagtgaatttttgcttataatagtga 13654641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 25408604 - 25408536
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    |||||||||||| |||||||| ||||||||  || ||||||||||||||| |||| | |||||| ||||    
T  25408604 acatacatcatttattgaatgaatctaaaatatgaatttttgcttatatttgtgaccggagggtgtatt 25408536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 30893853 - 30893909
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| |||||||| ||||||||  ||||||||| |||||||| ||||    
T  30893853 ccacatacatcatttattgaatgaatctaaaacatggattttttcttatatttgtga 30893909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 43506172 - 43506236
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||| | |||||| |||||||||||| | ||||||||||| |||||| | ||||||    
T  43506172 cacatacatcatttaatgaatgaatctaaaaagtgaaattttgcttataatagtgaccagagggt 43506236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 3100466 - 3100411
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgat 70  Q
    |||||||||||| |||||||| |||||||| ||  ||||||||||||| |||||||    
T  3100466 acatacatcatttattgaatgaatctaaaatgttaatttttgcttataatagtgat 3100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 5226082 - 5226032
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 64  Q
    |||||||||||||||| |||||| ||||||||||| || |||||||||||||    
T  5226082 ccacatacatcattaaatgaatgaatctaaaaagt-gaattttgcttatatt 5226032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 5226096 - 5226146
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 64  Q
    |||||||||||||||| |||||| ||||||||||| || |||||||||||||    
T  5226096 ccacatacatcattaaatgaatgaatctaaaaagt-gaattttgcttatatt 5226146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 45
Target Start/End: Original strand, 11172057 - 11172088
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaa 45  Q
    ||||||||||||||||||||||||||||||||    
T  11172057 cacatacatcattaattgaatgtatctaaaaa 11172088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 34186418 - 34186368
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 64  Q
    ||||||||||||||||||||||| | |||||||||  |||||||||||||||    
T  34186418 ccacatacatcattaattgaatgaacctaaaaagt-catttttgcttatatt 34186368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 5259469 - 5259527
Alignment:
Q  20 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||| |||||| |||||||| || | ||||||||||||||||||| | ||||||    
T  5259469 catcattaaatgaatgaatctaaaatgtagttttttgcttatattagtgaccggagggt 5259527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 20367371 - 20367337
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  20367371 ccacatacatcattaattgaatgaatctaaaaagt 20367337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 29807141 - 29807107
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  29807141 ccacatacatcattaattgaatgaatctaaaaagt 29807107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 39126091 - 39126125
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  39126091 ccacatacatcattaattgaatgaatctaaaaagt 39126125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 1098691 - 1098634
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgat 70  Q
    |||||||||||||| |||||||| |||||||||||  | |||| |||||| |||||||    
T  1098691 ccacatacatcatttattgaatgaatctaaaaagtcaacttttacttataatagtgat 1098634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 5259448 - 5259383
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||| |||||| | ||||||  | | ||||||||||||||||||| | ||||||    
T  5259448 ccacatacatcattaaatgaatgaacctaaaatatagttttttgcttatattagtgaccggagggt 5259383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 13356214 - 13356263
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttata 62  Q
    |||||||||||||| |||||||| |  |||||||| ||||||||||||||    
T  13356214 ccacatacatcatttattgaatgaacttaaaaagtagatttttgcttata 13356263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 13391590 - 13391529
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||| |||||||| ||||||||||| || |||| |||||| |||||| | ||||||    
T  13391590 atacatcatttattgaatgaatctaaaaagttgacttttacttataatagtgaccagagggt 13391529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 14153425 - 14153376
Alignment:
Q  20 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||| |||||| || |||||||| |||||||||||||| ||||||    
T  14153425 catcattaaatgaatgaatataaaaagtagatttttgcttataatagtga 14153376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 15549406 - 15549467
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||| |||||||||||| |||||||| || |||||||| ||||| |||||| | ||||||    
T  15549406 atacattattaattgaatgaatctaaaatgttgatttttgtttataatagtgaccggagggt 15549467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 20518255 - 20518304
Alignment:
Q  20 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||| |||||| || |||||||| |||||||||||||| ||||||    
T  20518255 catcattaaatgaatgaatgtaaaaagtagatttttgcttataatagtga 20518304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 26141832 - 26141897
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||| |||||| ||||| ||  | | ||||||||||||||||||| | ||||||    
T  26141832 ccacatacatcattaaatgaatgaatctagaatatagttttttgcttatattagtgaccggagggt 26141897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 2673910 - 2673854
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| |||||||||| |||||||||  |  |||||||||| ||||||    
T  2673910 ccacatacatcatttattgaatgtacctaaaaagtcaaaatttgcttataatagtga 2673854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 8717788 - 8717848
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgaggg 77  Q
    |||||| ||| |||||||| | ||||||| | |||||||||||||| |||||||| |||||    
T  8717788 atacattatttattgaatgaacctaaaaatttgatttttgcttataatagtgatcggaggg 8717848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 11172052 - 11172009
Alignment:
Q  25 ttaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||    
T  11172052 ttaattgaatgtatctaaaaa-taaatttttgcttatattagtga 11172009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 14416469 - 14416437
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaa 45  Q
    ||||||||||||||||||||||| |||||||||    
T  14416469 ccacatacatcattaattgaatgaatctaaaaa 14416437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 14571071 - 14571039
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaa 45  Q
    ||||||||||||||||||||||| |||||||||    
T  14571071 ccacatacatcattaattgaatgaatctaaaaa 14571039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 14571085 - 14571117
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaa 45  Q
    ||||||||||||||||||||||| |||||||||    
T  14571085 ccacatacatcattaattgaatgaatctaaaaa 14571117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 18652842 - 18652898
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| | |||||| |||||||| || |||||||| ||||| ||||||    
T  18652842 ccacatacatcatttaatgaatgaatctaaaatgttgatttttgtttataatagtga 18652898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 20362038 - 20362006
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||| |||||||||||    
T  20362038 acatacatcattaattgaatgaatctaaaaagt 20362006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 21945461 - 21945509
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    |||||||||||||||||| |||| |||||||| ||||||  ||||||||    
T  21945461 atacatcattaattgaatatatcaaaaaagtgaatttttatttatatta 21945509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 25792923 - 25792979
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| | |||||| | |||||||||  ||||||||||||| ||||||    
T  25792923 ccacatacatcatttaatgaatgaacctaaaaagtaaatttttgcttataatagtga 25792979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 36137076 - 36137044
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||| |||||||||||    
T  36137076 acatacatcattaattgaatgaatctaaaaagt 36137044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 14381301 - 14381236
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  14381301 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggt 14381236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 40098837 - 40098902
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  40098837 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggt 40098902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 26014632 - 26014576
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26014632 ccacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtga 26014576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 14381316 - 14381371
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14381316 cacatacatcattaattgaatgtatctaaaaagtggatttttgtttatattagtga 14381371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 40098822 - 40098751
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctattat 85  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||| ||||||    
T  40098822 cacatatatcattaattgaatgtatctaaaaagtagatttttgcttatattagtgaccggagggtgtattat 40098751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 9056098 - 9056163
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| | ||||||    
T  9056098 ccacatacatcattaattaaatgtatctaaaaagtgaatttttgcttatattagtgaccggagggt 9056163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 33574864 - 33574929
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| | ||||||    
T  33574864 ccacatacatcattaattgaatgtatctaaaatgtggatttttgtttatattagtgaccggagggt 33574929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 9056083 - 9056019
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | ||||||    
T  9056083 cacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatatttgtgaccggagggt 9056019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 1739644 - 1739707
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||| | ||||||    
T  1739644 acatacatcattaattgaatgtatctaaaaagtaaatttttgcttatattagtgaccggagggt 1739707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 7377617 - 7377568
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttata 62  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7377617 ccacatacatcattaattgaatgtatctaaaaagtgaatttttgcttata 7377568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 26014647 - 26014701
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  26014647 cacatacattattaattga-tgtatctaaaaagtggatttttgcttatattagtga 26014701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 7377632 - 7377688
Alignment:
Q  14 cacatacatcattaattgaatgtatct-aaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||    
T  7377632 cacatacatcattaattgaatgtatctaaaaaaatgaatttttgcttatattagtga 7377688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 11692109 - 11692046
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||| | ||||||    
T  11692109 cacatacatcattaatt-aatgtgtctaaaaagtggatttttgtttatattagtgaccggagggt 11692046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 13211317 - 13211368
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    |||||||||||||||||||||||||||||||| | ||||||| |||||||||    
T  13211317 cacatacatcattaattgaatgtatctaaaaaatagatttttacttatatta 13211368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 13228932 - 13228877
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||| |||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  13228932 cacatatatcattaattgaatgtatttaaaaaatggatttttgtttatattagtga 13228877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 9808436 - 9808379
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    |||||||| |||||||||||||||| ||||||||  ||||||| ||||||||||||||    
T  9808436 cacatacaccattaattgaatgtatataaaaagtaaatttttgtttatattagtgatc 9808379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 9808449 - 9808501
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    |||||||||| ||||||| |||||||||||||| || ||||||||||||||||    
T  9808449 ccacatacataattaattaaatgtatctaaaaaatgaatttttgcttatatta 9808501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 11295727 - 11295671
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| | ||||||||||||||| || |||||||||||||| ||||||    
T  11295727 ccacatacatcatttaatgaatgtatctaaaatgttgatttttgcttataatagtga 11295671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 5888417 - 5888468
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtg 68  Q
    ||||||||||||||||||| ||||| ||||| |||||||||||||| |||||    
T  5888417 atacatcattaattgaatgaatctacaaagtagatttttgcttataatagtg 5888468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 24418959 - 24419006
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttata 62  Q
    |||||||||||| |||||||| |||||||||||| |||||||||||||    
T  24418959 acatacatcatttattgaatgaatctaaaaagtgaatttttgcttata 24419006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 24820375 - 24820430
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||| |||||||| |||||||||| | ||||||||||||| ||||||    
T  24820375 cacatacatcatttattgaatgaatctaaaaagagaatttttgcttataatagtga 24820430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 29451804 - 29451865
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaag---tggatttttgcttatattagtgatc 71  Q
    |||||||||| ||||||||||||||| ||||||    |||||||||||||||||||||||||    
T  29451804 ccacatacattattaattgaatgtatttaaaaaaaaatggatttttgcttatattagtgatc 29451865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 31810414 - 31810481
Alignment:
Q  16 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    ||||||||||||| |||||| |||||||| || | ||||||||||||||||||| | |||||| ||||    
T  31810414 catacatcattaaatgaatgaatctaaaatgtagttttttgcttatattagtgaccggagggtgtatt 31810481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 10934680 - 10934745
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||| | |||||| |||||||| || |||||||||||||| |||||| | ||||||    
T  10934680 ccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgaccggagggt 10934745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 13964482 - 13964417
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||| |||||||| || ||||| || |||||||||||||| |||||| | ||||||    
T  13964482 ccacatacatcatttattgaatgaatttaaaatgttgatttttgcttataatagtgaccagagggt 13964417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 15232350 - 15232411
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||| || || |||||||| ||||| |||||| ||||||| ||||||    
T  15232350 atacatcattaattgaatgaatttagaaagtggaattttgtttatatcagtgatcggagggt 15232411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 31505115 - 31505180
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||| |||||| | |||||| || | ||||||||||||||||||| | ||||||    
T  31505115 ccacatacatcattaaatgaatgaacctaaaatgtagttttttgcttatattagtgaccggagggt 31505180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 10117051 - 10117103
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||| |||||||| ||  ||||||||||||| ||||||    
T  10117051 atacatcattaattgaatgaatctaaaatgtaaatttttgcttataatagtga 10117103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 24820361 - 24820305
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| |||||||| | |||| ||||| ||||||||||||| ||||||    
T  24820361 ccacatacatcatttattgaatgaacctaagaagtgaatttttgcttataatagtga 24820305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 28882727 - 28882671
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| |||||||| ||||||||||| || ||||||| ||| ||||||    
T  28882727 ccacatacatcatttattgaatgaatctaaaaagtagacttttgctcataatagtga 28882671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 48
Target Start/End: Original strand, 13228947 - 13228982
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtg 48  Q
    |||||||||||||||||| |||||||||||||||||    
T  13228947 ccacatacatcattaattaaatgtatctaaaaagtg 13228982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 29424062 - 29424125
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||| |||||||| ||||||||  || ||||||||||||||| |||| | ||||||    
T  29424062 acatacatcatttattgaatgaatctaaaatatgaatttttgcttatatttgtgaccggagggt 29424125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 45
Target Start/End: Original strand, 37716152 - 37716183
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaa 45  Q
    ||||||||||||||||||||||||||||||||    
T  37716152 cacatacatcattaattgaatgtatctaaaaa 37716183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 48
Target Start/End: Complemental strand, 43483995 - 43483960
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtg 48  Q
    ||||||||||||||||||||||| ||||||||||||    
T  43483995 ccacatacatcattaattgaatgaatctaaaaagtg 43483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 45045458 - 45045517
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagg 76  Q
    ||||||||||||||||||| ||||||||  | |||||||| ||||| |||||||| ||||    
T  45045458 atacatcattaattgaatgaatctaaaatatagatttttgtttataatagtgatcagagg 45045517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 34194623 - 34194589
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  34194623 ccacatacatcattaattgaatgaatctaaaaagt 34194589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 40716809 - 40716775
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  40716809 ccacatacatcattaattgaatgaatctaaaaagt 40716775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 42631842 - 42631808
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  42631842 ccacatacatcattaattgaatgaatctaaaaagt 42631808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 2810075 - 2810030
Alignment:
Q  33 atgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||| |||||| ||||||||||||||||||||| ||| ||||||    
T  2810075 atgtatttaaaaaatggatttttgcttatattagtaatcggagggt 2810030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 7484694 - 7484743
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttata 62  Q
    |||||||||||||| | |||||| |||||||| || ||||||||||||||    
T  7484694 ccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttata 7484743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 13211302 - 13211237
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||| |||||||||| |||||||||||||| |  |||||| ||||||||| ||| | ||||||    
T  13211302 ccacatatatcattaattaaatgtatctaaaaaataaatttttacttatattaatgaccagagggt 13211237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 13841907 - 13841855
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||| |||||||| || ||||||||  ||||||||||||| ||||||    
T  13841907 atacatcatttattgaatgaatttaaaaagtaaatttttgcttataatagtga 13841855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 15285734 - 15285782
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    ||||||| |||||||||||||| ||||||||  ||||||| ||||||||    
T  15285734 atacatccttaattgaatgtatttaaaaagtaaatttttgtttatatta 15285782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 15466103 - 15466151
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    ||||||| |||||||||||||| ||||||||  ||||||| ||||||||    
T  15466103 atacatccttaattgaatgtatttaaaaagtaaatttttgtttatatta 15466151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 37716135 - 37716079
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    ||||| |||||||||| ||| ||||||||||||| | |||| ||||||||| |||||    
T  37716135 acatatatcattaattaaatatatctaaaaagtgaaattttacttatattaatgatc 37716079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 44282342 - 44282374
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaa 45  Q
    ||||||||||||||||||||||| |||||||||    
T  44282342 ccacatacatcattaattgaatgaatctaaaaa 44282374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 21506525 - 21506456
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||    
T  21506525 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggtgtatt 21506456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 17773579 - 17773648
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||| ||||    
T  17773579 cacatacatcattaattgaatgtatctaaaaagtagatttttgcttatattagtgaccggagggtgtatt 17773648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 30397788 - 30397717
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatta 84  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| | |||||| |||||    
T  30397788 ccacatacatcattaattgaatgtatctaaaatgtggatttttgtttatattagtgaccggagggtgtatta 30397717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 17773564 - 17773508
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  17773564 ccacatacatcatttattgaatgtatctaaaaagtggatttttgtttatattagtga 17773508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 21998101 - 21998037
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||| |||||||||||||||||||||| || |||||||||||||||||||||| ||||||    
T  21998101 cacatacattattaattgaatgtatctaaaaaatgtatttttgcttatattagtgatcggagggt 21998037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 30397802 - 30397866
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||| | ||||||    
T  30397802 cacatacatcattaattgaatgtatctaaaaaagggatttttgcttatattagtgaccggagggt 30397866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 21998117 - 21998172
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  21998117 cacatacatcattaattgaatgtatctaaaaagtagatttttgcttatattggtga 21998172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 31536374 - 31536309
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||| | |||||||||||||||| ||||||||||||||||||||| | ||||||    
T  31536374 ccacatacatcattaaataaatgtatctaaaaagttgatttttgcttatattagtgaccggagggt 31536309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 30460690 - 30460746
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  30460690 ccacatacatcattaattgaatctatctaaaaagtaaatttttgcttatattagtga 30460746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 4844352 - 4844300
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  4844352 ccacatacatcattaattgaatgtatctaaaaaatgattttttgcttatatta 4844300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 21506541 - 21506592
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  21506541 cacatacatcattaattgaatgtatctaaaaattaaatttttgcttatatta 21506592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 28577679 - 28577730
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  28577679 cacatacattattaattgaatgtatctaaaaagtatatttttgcttatatta 28577730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 30460675 - 30460624
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    ||||||||||||| ||||||| |||||| |||||||||||||||||||||||    
T  30460675 cacatacatcattgattgaatatatctacaaagtggatttttgcttatatta 30460624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 4844359 - 4844401
Alignment:
Q  20 catcattaattgaatgtatctaaaaagtggatttttgcttata 62  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  4844359 catcattaattgaatgtatctaaaaagtgaatttttgcttata 4844401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 15718470 - 15718540
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    |||||||||||||| |||||||| || | ||||||| ||||||||||||| |||||||| |||||| ||||    
T  15718470 ccacatacatcatttattgaatgaattttaaaagtgaatttttgcttataatagtgatcagagggtgtatt 15718540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 16121046 - 16121106
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgaggg 77  Q
    |||||||||| ||| |||| ||||||||||| |||||||||||||| |||||||| |||||    
T  16121046 atacatcatttatttaatgaatctaaaaagttgatttttgcttataatagtgatcggaggg 16121106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 17268076 - 17268020
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||| ||||||| |||||| | ||||||| |||||||||||||    
T  17268076 ccacatacatcattaattaaatgtatttaaaaaatagatttttacttatattagtga 17268020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 17268091 - 17268146
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||| |||||||||||||||||| |||||| | |||| |||||||||||||    
T  17268091 cacatacattattaattgaatgtatctagaaagtgaacttttacttatattagtga 17268146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 28577654 - 28577599
Alignment:
Q  23 cattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||| |||||||||||||| || |||||||||||||||||||| | ||||||    
T  28577654 cattaattaaatgtatctaaaaaatgaatttttgcttatattagtgacctgagggt 28577599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 31536392 - 31536447
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||| ||| ||||||||||||||| ||||||||  ||||||||||||||||||||    
T  31536392 cacatgcataattaattgaatgtatttaaaaagtaaatttttgcttatattagtga 31536447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 6560720 - 6560650
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    |||||||||||||||| |||||| | |||||| || | ||||||||||||||||||| | |||||| ||||    
T  6560720 ccacatacatcattaaatgaatgaacctaaaatgtagttttttgcttatattagtgaccggagggtgtatt 6560650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 7158319 - 7158254
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||| |||||||  ||||||||  | |||||||||||||||| |||||| ||||||    
T  7158319 ccacatacatcatttattgaataaatctaaaacatagatttttgcttatatttgtgatcagagggt 7158254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 14310598 - 14310663
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||| |||||| ||||||||    ||||||||||||||||||||| | ||||||    
T  14310598 ccacatacatcattaaatgaatgaatctaaaatacagatttttgcttatattagtgaccggagggt 14310663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 31398289 - 31398224
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||| |||||| | |||||| || | ||||||||||||||||||| | ||||||    
T  31398289 ccacatacatcattaaatgaatgaacctaaaatgtagttttttgcttatattagtgaccggagggt 31398224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 13281593 - 13281541
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||| ||||||||  | |||||||||||||| ||||||    
T  13281593 atacatcattaattgaatgaatctaaaatctagatttttgcttataatagtga 13281541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 26527236 - 26527188
Alignment:
Q  30 tgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||| || |||||||||||||| |||||||| ||||||    
T  26527236 tgaatgtatctaaaatgttgatttttgcttataatagtgatcggagggt 26527188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 34379812 - 34379868
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  34379812 ccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 34379868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 28034092 - 28034142
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 64  Q
    |||||||||||||||| |||||| | ||||||||| ||||||||||||||||    
T  28034092 ccacatacatcattaaatgaatgaacctaaaaagt-gatttttgcttatatt 28034142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 8363677 - 8363627
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    ||||| ||||||||||||||||||||||||| |  ||||||| ||||||||    
T  8363677 acatatatcattaattgaatgtatctaaaaaatatatttttgtttatatta 8363627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 14173451 - 14173397
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||| ||||| |||||||| ||||||||| | |||||||||||||| ||||||    
T  14173451 acatacttcatttattgaatgaatctaaaaattagatttttgcttataatagtga 14173397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 14177987 - 14177933
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||| ||||| |||||||| ||||||||| | |||||||||||||| ||||||    
T  14177987 acatacttcatttattgaatgaatctaaaaattagatttttgcttataatagtga 14177933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 15836617 - 15836687
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatta 84  Q
    ||||||||||||| |||||||| ||||||||  || |||||| |||||||| |||| | |||||| |||||    
T  15836617 cacatacatcatttattgaatgaatctaaaacatgtatttttacttatatttgtgaccggagggtgtatta 15836687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 21478616 - 21478582
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  21478616 ccacatacatcattaattgaatgaatctaaaaagt 21478582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 3012439 - 3012488
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 64  Q
    |||||||||||| |||||||| ||||||||  || |||||||||||||||    
T  3012439 acatacatcatttattgaatgaatctaaaacatgaatttttgcttatatt 3012488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 6048018 - 6047985
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagt 47  Q
    |||||||||||||||||||||| |||||||||||    
T  6048018 cacatacatcattaattgaatgaatctaaaaagt 6047985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 6048033 - 6048066
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaag 46  Q
    ||||||||||||||||||||||| ||||||||||    
T  6048033 ccacatacatcattaattgaatgaatctaaaaag 6048066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 13276549 - 13276484
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||| |||||||| | ||||||  || ||||||||||||||| |||| | ||||||    
T  13276549 ccacatacatcatttattgaatgaacctaaaacatgaatttttgcttatatttgtgaccggagggt 13276484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 3203730 - 3203678
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||| |||||||| | ||||||| | |||||||||||||| ||||||    
T  3203730 atacatcattcattgaatgaacctaaaaaattgatttttgcttataatagtga 3203678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 3203752 - 3203804
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||| ||| |||| | ||||||||| |||||||||||||| ||||||    
T  3203752 atacatcatttattaaatgaacctaaaaagttgatttttgcttataatagtga 3203804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 8146031 - 8146091
Alignment:
Q  18 tacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||| |||||| |||||||| ||   ||||||||||||||||||| | ||||||    
T  8146031 tacatcattaaatgaatgaatctaaaatgtaattttttgcttatattagtgaccggagggt 8146091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 12383868 - 12383920
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||| ||||||||||||  ||||||| || |||||||||||||| ||||||    
T  12383868 atacataattaattgaatgagtctaaaatgtagatttttgcttataatagtga 12383920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 26527267 - 26527323
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| | |||||| |||||||| ||  ||||||||||||| ||||||    
T  26527267 ccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtga 26527323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 33053827 - 33053763
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||| |||||||| ||||||||  | ||||||| |||||||| |||| | ||||||    
T  33053827 cacatacatcatttattgaatgaatctaaaacatagattttttcttatatttgtgaccggagggt 33053763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 9e-24; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 52817645 - 52817709
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  52817645 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggt 52817709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 24941174 - 24941118
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24941174 ccacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtga 24941118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 5281213 - 5281282
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| | |||||| ||||    
T  5281213 cacatacatcattaattgaatgtatctaaaaagtgaatttttacttatattagtgaccggagggtgtatt 5281282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 5418592 - 5418657
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||| ||||||    
T  5418592 ccacatacatcattaattcaatgtatctaaaaagtaaatttttgcttatattagtgatcggagggt 5418657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 13689598 - 13689543
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  13689598 cacatacatcattaattgaatgtatctaaaaaatagatttttgcttatattagtga 13689543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 55087791 - 55087853
Alignment:
Q  16 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||| | ||||||    
T  55087791 catacatcattaattgaatgtatctaaaaattagatttttgcttatattagtgaccggagggt 55087853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 5418577 - 5418522
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||||||||||||| | |||||||||| ||||||||||    
T  5418577 cacatacatcattaattgaatgtatctaaaaaattgatttttgctcatattagtga 5418522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 13689615 - 13689669
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  13689615 acatacattattaattgaatgaatctaaaaagtgaatttttgcttatattagtga 13689669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 44156083 - 44156133
Alignment:
Q  19 acatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  44156083 acatcattaattcaatgtatctaaaaagtgaatttttgcttatattagtga 44156133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 19934701 - 19934636
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||| |||||| | ||||||    
T  19934701 ccacatacatcatttattgaatgaatctaaaaagtggaattttgcttataatagtgaccggagggt 19934636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 19934715 - 19934780
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||| |||||||| ||||||||| | |||||||||||||| |||||||| ||||||    
T  19934715 ccacatacatcatttattgaatgaatctaaaaaatagatttttgcttataatagtgatcggagggt 19934780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 29224004 - 29223951
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 67  Q
    |||||| |||||||||||||| |||||||||| |||||||||||||||||||||    
T  29224004 cacatatatcattaattgaatatatctaaaaaatggatttttgcttatattagt 29223951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 54164876 - 54164811
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||| |||||| | ||||||    
T  54164876 ccacatacatcatttattgaatgaatctaaaaagtggaattttgcttataatagtgaccggagggt 54164811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 3504137 - 3504083
Alignment:
Q  16 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgat 70  Q
    |||||||||||||||||||| ||||||||| || ||||||| |||||||||||||    
T  3504137 catacatcattaattgaatgaatctaaaaaatgaatttttgtttatattagtgat 3504083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 54164890 - 54164960
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    |||||||||||||| |||||||| ||||||||| | |||||||||||||| |||||| | |||||| ||||    
T  54164890 ccacatacatcatttattgaatgaatctaaaaaatagatttttgcttataatagtgaccggagggtgtatt 54164960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 4370459 - 4370398
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||| |||||||| ||||||||  |||||||||||||||||| |||||| ||||||    
T  4370459 atacatcatttattgaatgaatctaaaatatggatttttgcttatatttgtgatcggagggt 4370398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 24941192 - 24941253
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||| ||| ||||||||| |||| ||||| | ||||||    
T  24941192 atacatcattaattgaatgtatctaaaaggtgaatttttgctcatatcagtgaccggagggt 24941253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 29006912 - 29006968
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| |||||||| || ||||||||||| ||||||||||| ||||||    
T  29006912 ccacatacatcatttattgaatgaatttaaaaagtggaattttgcttataatagtga 29006968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 52817629 - 52817565
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||| |||| ||||||||||| ||||||| |||||||||||||| ||||| | ||||||    
T  52817629 cacatacatccttaaatgaatgtatcttaaaagtgaatttttgcttatatcagtgaccggagggt 52817565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 29006897 - 29006842
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||| |||||||| ||||||||| | |||||||||||||| ||||||    
T  29006897 cacatacatcatttattgaatgaatctaaaaaatagatttttgcttataatagtga 29006842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 3511768 - 3511714
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    ||||||||||||||||||| |||||||| ||  | ||||||||||||||||||||    
T  3511768 atacatcattaattgaatgaatctaaaatgtaaagttttgcttatattagtgatc 3511714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 5535775 - 5535713
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgaggg 77  Q
    |||||||||||| |||||||| ||||||||| ||  |||||||||||| |||||||| |||||    
T  5535775 acatacatcatttattgaatgaatctaaaaaatgagtttttgcttatactagtgatcagaggg 5535713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 14451013 - 14450955
Alignment:
Q  20 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||| |||||| |||||||| || |||||||||||||| |||||||| ||||||    
T  14451013 catcattaaatgaatgaatctaaaatgtagatttttgcttataatagtgatcggagggt 14450955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 34616296 - 34616350
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    |||||||||| | ||||||||||||||| || |||||||||||||| ||||||||    
T  34616296 atacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtgatc 34616350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 38382055 - 38382109
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||| | ||||||||||||||| || |||||||||||||| ||||||    
T  38382055 acatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtga 38382109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 10031554 - 10031506
Alignment:
Q  18 tacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 67  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  10031554 tacatcattaattgaatgtatctaaaaagtaaattttt-cttatattagt 10031506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 10031599 - 10031652
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 67  Q
    ||||||||| ||||||| ||| ||||||||||| ||||||||| ||||||||||    
T  10031599 cacatacattattaattaaatatatctaaaaagcggatttttgtttatattagt 10031652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 11796663 - 11796716
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtg 68  Q
    |||||||||||| |||||||  |||||||||||| ||||||||||||| |||||    
T  11796663 acatacatcatttattgaataaatctaaaaagtgaatttttgcttataatagtg 11796716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 49481957 - 49482022
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||| |||||||| ||| || || | ||||||||||||||||||| | ||||||    
T  49481957 ccacatacatcattaaatgaatgtacctagaatgtagttttttgcttatattagtgaccggagggt 49482022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 20598316 - 20598264
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||| |||||||||||||||||  || ||||||||||||||| ||||    
T  20598316 atacatcatttattgaatgtatctaaaacatgaatttttgcttatatttgtga 20598264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 9011822 - 9011872
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 64  Q
    |||||||||||||||| |||||| ||||||||||| || |||||||||||||    
T  9011822 ccacatacatcattaaatgaatgaatctaaaaagt-gaattttgcttatatt 9011872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 31860714 - 31860664
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 64  Q
    |||||||||||||||| |||||| ||||||||||| || |||||||||||||    
T  31860714 ccacatacatcattaaatgaatgaatctaaaaagt-gaattttgcttatatt 31860664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 48
Target Start/End: Original strand, 44639823 - 44639858
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtg 48  Q
    ||||||||||||||||||||||| ||||||||||||    
T  44639823 ccacatacatcattaattgaatgaatctaaaaagtg 44639858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 45861082 - 45861132
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 64  Q
    |||||||||||||||| |||||| ||||||||||| || |||||||||||||    
T  45861082 ccacatacatcattaaatgaatgaatctaaaaagt-gaattttgcttatatt 45861132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 47181638 - 47181685
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttata 62  Q
    |||||||||||| | ||||||||||||||| || ||||||||||||||    
T  47181638 acatacatcatttaatgaatgtatctaaaacgttgatttttgcttata 47181685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 48402472 - 48402425
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttata 62  Q
    |||||||||||| | ||||||||||||||| || ||||||||||||||    
T  48402472 acatacatcatttaatgaatgtatctaaaacgttgatttttgcttata 48402425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 56364387 - 56364340
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttata 62  Q
    |||||||||||| | ||||||||||||||| || ||||||||||||||    
T  56364387 acatacatcatttaatgaatgtatctaaaacgttgatttttgcttata 56364340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 5289765 - 5289731
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  5289765 ccacatacatcattaattgaatgaatctaaaaagt 5289731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 6243706 - 6243756
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 67  Q
    ||||||||||||||||||||||||||| | |  |||||| |||||||||||    
T  6243706 atacatcattaattgaatgtatctaaataataaattttttcttatattagt 6243756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 19878350 - 19878292
Alignment:
Q  12 tccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgat 70  Q
    |||||||||||| || | |||||| |||||||| ||  |||||||||||||||||||||    
T  19878350 tccacatacatcgtttaatgaatgaatctaaaatgttaatttttgcttatattagtgat 19878292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 22020177 - 22020123
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||| |||||| |||||||| |||||||||||| | ||||||||||| ||||||    
T  22020177 acatatatcatttattgaatgaatctaaaaagtgaacttttgcttataatagtga 22020123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 43635899 - 43635865
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  43635899 ccacatacatcattaattgaatgaatctaaaaagt 43635865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 47308173 - 47308119
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    |||||||||||| |||||| ||| |||| || |||||||||||||| ||||||||    
T  47308173 atacatcattaaatgaatgaatccaaaatgttgatttttgcttataatagtgatc 47308119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 50038513 - 50038479
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  50038513 ccacatacatcattaattgaatgaatctaaaaagt 50038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 50045735 - 50045701
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  50045735 ccacatacatcattaattgaatgaatctaaaaagt 50045701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 53684863 - 53684912
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 64  Q
    ||||||||||||||| |||||| | ||||||||| ||||||||||||||||    
T  53684863 cacatacatcattaaatgaatgaacctaaaaagt-gatttttgcttatatt 53684912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 54106536 - 54106482
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||| |||||||| ||||||||  || ||||||||||||||| ||||    
T  54106536 acatacatcatttattgaatgaatctaaaatatgaatttttgcttatatttgtga 54106482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 56328534 - 56328592
Alignment:
Q  20 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||| |||||| |||||||| || | ||||||||||||||||||| | ||||||    
T  56328534 catcattaaatgaatgaatctaaaatgtagttttttgcttatattagtgaccggagggt 56328592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 2198092 - 2198055
Alignment:
Q  32 aatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  2198092 aatgtatctaaaaagtggagttttgcttataatagtga 2198055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 20215630 - 20215565
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||| |||||||| | |||||| ||  ||||||||||||| |||||| | ||||||    
T  20215630 ccacatacatcatttattgaatgaacctaaaatgtcaatttttgcttataatagtgaccggagggt 20215565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 22720602 - 22720639
Alignment:
Q  32 aatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  22720602 aatgtatctaaaaagtggagttttgcttataatagtga 22720639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 29224012 - 29224049
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttt 54  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  29224012 atacatcattaattcaatgtatctaaaaagtgaatttt 29224049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 35005132 - 35005181
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttata 62  Q
    |||||||||| ||| |||||||| ||||||||| || |||||||||||||    
T  35005132 ccacatacattatttattgaatgaatctaaaaattgaatttttgcttata 35005181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 36786209 - 36786164
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttata 62  Q
    ||||||||||||||||||| |||||||| || |||||||| |||||    
T  36786209 atacatcattaattgaatgaatctaaaatgttgatttttgtttata 36786164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 4044375 - 4044431
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||| |||||| |  ||||| || | |||||||||||||||||||    
T  4044375 ccacatacatcattaaatgaatgaacataaaatgtagttttttgcttatattagtga 4044431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 6462774 - 6462726
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttata 62  Q
    ||||||||||||| |||||||| | ||||||||| |||||||| |||||    
T  6462774 cacatacatcatttattgaatgaacctaaaaagtagatttttgtttata 6462726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 11583786 - 11583818
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||| |||||||||||    
T  11583786 acatacatcattaattgaatgaatctaaaaagt 11583818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 20542866 - 20542834
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaa 45  Q
    ||||||||||||||||||||||| |||||||||    
T  20542866 ccacatacatcattaattgaatgaatctaaaaa 20542834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 34827549 - 34827581
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaa 45  Q
    ||||||||||||||||||||||| |||||||||    
T  34827549 ccacatacatcattaattgaatgaatctaaaaa 34827581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 55936064 - 55936120
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| | |||||| ||||||||  | |||||||||||||| ||||||    
T  55936064 ccacatacatcatttaatgaatgaatctaaaatattgatttttgcttataatagtga 55936120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 33412543 - 33412598
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33412543 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 33412598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 42449167 - 42449112
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42449167 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 42449112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 50260996 - 50260942
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50260996 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 50260942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 51617393 - 51617323
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatta 84  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||| |||||    
T  51617393 cacatacatcattaattgaatgtatctaaaaagtggatttttggttatattagtgaccggagggtgtatta 51617323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 52315468 - 52315538
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatta 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| || |||||    
T  52315468 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatactagtgatcggagagtgtatta 52315538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 51617408 - 51617478
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| | |||||| ||||    
T  51617408 ccacatacaacattaattgaatgtatctaaaaagtggaattttgcttatattagtgaccggagggtgtatt 51617478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 33412527 - 33412478
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatat 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33412527 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatat 33412478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 52315453 - 52315400
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattag 66  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  52315453 ccacatacatcattaattgaatatatctaaaaagtggatttttgcttatattag 52315400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 51239321 - 51239385
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| | ||||||    
T  51239321 cacatacatcattaattgaatgtatctaaaaaatagatttttgcttatattagtgaccggagggt 51239385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 36362682 - 36362733
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36362682 cacatacatcattaattgaatgtatctaaaaagtagatttttgcttatatta 36362733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 21403973 - 21404036
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| | ||||||    
T  21403973 ccacatacatcattaattgaatgtatctaaaa--tggatttttgcttatattagtgaccggagggt 21404036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 41349737 - 41349803
Alignment:
Q  13 ccacatacatcattaattgaatgtatct-aaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | ||||||    
T  41349737 ccacatacatcattaattgaatgtatctaaaaaaatggatttttgcttatattagtgaccggagggt 41349803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 22173857 - 22173800
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||    
T  22173857 cacatacatcattaattgaatgtatctaaaatgtagatttttgcttatattaatgatc 22173800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 29720153 - 29720218
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||| | ||||||    
T  29720153 ccacatacatcattaattaaatgtatttaaaaagtgaatttttgcttatattagtgaccggagggt 29720218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 38455228 - 38455163
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||| ||| | ||||||    
T  38455228 ccacatacatcattaaattaatgtatctaaaaagtggatttttgcttatattaatgaccggagggt 38455163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 52168346 - 52168281
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||| | ||||||    
T  52168346 ccacatacatcattaattaaatgtatctaaaaagtaaatttttgcttatattagtgaccggagggt 52168281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 29565171 - 29565107
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||| |||||||||||||| | ||||||||||||||||||||| | ||||||    
T  29565171 cacatacatcattaattaaatgtatctaaaaaattgatttttgcttatattagtgaccggagggt 29565107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 41349722 - 41349658
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||| | ||||||| |||||||||||||||||||| | ||||||    
T  41349722 cacatacatcattaattgaatgtattttaaaagtgaatttttgcttatattagtgaccggagggt 41349658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 52931704 - 52931648
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||||||||||||||| | || ||||||||||||||||||||    
T  52931704 ccacatacatcattaattgaatgtatctaaagaatgaatttttgcttatattagtga 52931648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 52931751 - 52931815
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||| | ||||||    
T  52931751 cacatacatcattaattgaatgtatctaaaaagtagatttttacttatatcagtgaccggagggt 52931815  T

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Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 21403958 - 21403897
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagg 76  Q
    ||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||    
T  21403958 cacatacatcattaattgaat-tatctaaaaagtagatttttgtttatattagtgatcggagg 21403897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 17552539 - 17552470
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    ||||||||| ||||||||||||||| | ||||||| |||||||||||||||||||| | |||||| ||||    
T  17552539 cacatacattattaattgaatgtattttaaaagtgaatttttgcttatattagtgaccggagggtgtatt 17552470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 36362667 - 36362602
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||| ||||||| |||| ||| ||||||||||||||||||||| | ||||||    
T  36362667 ccacatacatcattaattaaatgtatttaaagagttgatttttgcttatattagtgaccggagggt 36362602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 51239306 - 51239241
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||| | ||||||    
T  51239306 ccacatatatcattagttgaatgtatctaaagagtagatttttgcttatattagtgaccggagggt 51239241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 52168360 - 52168425
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||| ||| ||| | ||||||    
T  52168360 ccacatacatcattaaattaatgtatctaaaaagtggatttttgcttatgttaatgaccggagggt 52168425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 29565186 - 29565238
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    ||||||| |||||||||||||||||| ||||||||| ||||||||||||||||    
T  29565186 ccacatatatcattaattgaatgtatgtaaaaagtgaatttttgcttatatta 29565238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 29720138 - 29720074
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||| |||| |||||||||| |||||||||||||||||||| |||||||||||| | ||||||    
T  29720138 cacatatatcaataattgaatgcatctaaaaagtggatttttgattatattagtgaccggagggt 29720074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 38455243 - 38455307
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||| | ||||||    
T  38455243 cacatacatcattaattaaatgtatctaaaaagtaaatttttgtttatattagtgaccggagggt 38455307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 22099841 - 22099786
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||| |||||||||||||||||||||||| |||||||| ||| ||||||||    
T  22099841 cacatacattattaattgaatgtatctaaaaagtagatttttgtttaaattagtga 22099786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 18940046 - 18940104
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    |||||||||||||||||||||||||| |||||  |  ||||||||||||||||||||||    
T  18940046 ccacatacatcattaattgaatgtatataaaatataaatttttgcttatattagtgatc 18940104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 29720226 - 29720279
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattag 66  Q
    ||||||| ||||||||||||||| ||||||||| || |||||||||||||||||    
T  29720226 ccacatatatcattaattgaatgcatctaaaaaatgaatttttgcttatattag 29720279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 18940025 - 18939969
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgat 70  Q
    ||||||||||||||||| ||||||| |||||| || |||||| ||||||||||||||    
T  18940025 cacatacatcattaattaaatgtatttaaaaaatgaatttttacttatattagtgat 18939969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 26367532 - 26367469
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||| |||||||| ||||||||  |||||||||||||||||| |||| | ||||||    
T  26367532 acatacatcatttattgaatgaatctaaaacatggatttttgcttatatttgtgaccggagggt 26367469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 12744960 - 12744894
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    ||||||||||||||||||| |||||||| ||   |||||||||||| |||||| | |||||||||||    
T  12744960 atacatcattaattgaatgaatctaaaatgtaagtttttgcttataatagtgaccggagggtctatt 12744894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 17552554 - 17552596
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggattttt 55  Q
    ||||||||||| |||||||||||||| ||||||||||||||||    
T  17552554 ccacatacatcgttaattgaatgtatttaaaaagtggattttt 17552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 29512208 - 29512262
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 67  Q
    |||||||||||||||||| |||||||||||||| |  |||||||||||| |||||    
T  29512208 ccacatacatcattaattaaatgtatctaaaaaataaatttttgcttatgttagt 29512262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 50261011 - 50261081
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtgga-tttttgcttatattagtgatccgagggtctatt 83  Q
    |||||||||| |||| ||||||||||| ||||||| | ||||||||||||||||||| | |||||| ||||    
T  50261011 cacatacatccttaaatgaatgtatcttaaaagtgaattttttgcttatattagtgaccggagggtgtatt 50261081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 25881213 - 25881278
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||| |||||| | |||||| || | ||||||||||||||||||| | ||||||    
T  25881213 ccacatacatcattaaatgaatgaacctaaaatgtagttttttgcttatattagtgaccggagggt 25881278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 29512193 - 29512137
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    |||||||||||||||||||||||||||||||| ||||||  |  ||||||||||||||    
T  29512193 cacatacatcattaattgaatgtatctaaaaa-tggattgctatttatattagtgatc 29512137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 2128438 - 2128494
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| |||||||| ||||||||  || ||||||||||||| ||||||    
T  2128438 ccacatacatcatttattgaatgaatctaaaacatgaatttttgcttataatagtga 2128494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 8439321 - 8439265
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||| |||||| | |||||| || | |||||||||||||||||||    
T  8439321 ccacatacatcattaaatgaatgaacctaaaatgtagttttttgcttatattagtga 8439265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 12744978 - 12745034
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| | ||||||||||||||| ||  ||||||||||||| ||||||    
T  12744978 ccacatacatcatttaatgaatgtatctaaaatgttaatttttgcttataatagtga 12745034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 54595853 - 54595797
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  54595853 ccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 54595797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 26367552 - 26367603
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 64  Q
    |||||||||||||| |||||||| ||||||||  | ||||||||||||||||    
T  26367552 ccacatacatcatttattgaatgaatctaaaacattgatttttgcttatatt 26367603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 29076602 - 29076652
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 64  Q
    ||||||||||||||||||||||| |||||||||||  | |||||||||||||    
T  29076602 ccacatacatcattaattgaatgaatctaaaaagt-caattttgcttatatt 29076652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 41254010 - 41254073
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||| | | ||||||||||||| || |||||||||||||| || ||||| ||||||    
T  41254010 acatacatcatttaataaatgtatctaaaatgttgatttttgcttataataatgatcggagggt 41254073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 45
Target Start/End: Original strand, 52931719 - 52931750
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaa 45  Q
    ||||||||||||||||||||||||||||||||    
T  52931719 cacatacatcattaattgaatgtatctaaaaa 52931750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 21217245 - 21217299
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||| | ||||| ||||||||| || |||||||||||||| ||||||    
T  21217245 acatacatcatttaatgaatatatctaaaacgttgatttttgcttataatagtga 21217299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 24075526 - 24075576
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 67  Q
    ||||||||| ||||||||| |||||||| || |||||||||||||| ||||    
T  24075526 atacatcatgaattgaatgaatctaaaatgtagatttttgcttataatagt 24075576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 32589378 - 32589344
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  32589378 ccacatacatcattaattgaatgaatctaaaaagt 32589344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 42449183 - 42449237
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtg 68  Q
    ||||| ||||||||||||||||||| |||||| |  ||||||| |||||||||||    
T  42449183 cacattcatcattaattgaatgtatttaaaaaatatatttttgtttatattagtg 42449237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 42595814 - 42595848
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  42595814 ccacatacatcattaattgaatgaatctaaaaagt 42595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 44382891 - 44382945
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||| |||||| | ||||||||||||||| || |||||||||||||| ||||||    
T  44382891 acatatatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtga 44382945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 3972530 - 3972489
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggattttt 55  Q
    |||||||||||||||||||||| |||||||| || |||||||    
T  3972530 cacatacatcattaattgaatgaatctaaaatgtagattttt 3972489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 3994564 - 3994605
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggattttt 55  Q
    |||||||||||||||||||||| |||||||| || |||||||    
T  3994564 cacatacatcattaattgaatgaatctaaaatgtagattttt 3994605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 3997348 - 3997389
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggattttt 55  Q
    |||||||||||||||||||||| |||||||| || |||||||    
T  3997348 cacatacatcattaattgaatgaatctaaaatgtagattttt 3997389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 10872753 - 10872814
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||| ||||||||  |  ||||||||||||| |||||| | ||||||    
T  10872753 atacatcattaattgaatgaatctaaaatataaatttttgcttataatagtgaccggagggt 10872814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 21217226 - 21217173
Alignment:
Q  16 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  21217226 catacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtga 21217173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 29241561 - 29241606
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttata 62  Q
    |||||||||| |||||||| ||||||||||| |||||| |||||||    
T  29241561 atacatcatttattgaatgaatctaaaaagttgattttggcttata 29241606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 32759044 - 32759101
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    |||||| |||||||||| ||| ||||||||||||  ||||||  ||||||||||||||    
T  32759044 cacatatatcattaattaaatatatctaaaaagtaaatttttatttatattagtgatc 32759101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 37897741 - 37897696
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttata 62  Q
    ||||||||||||||||||| ||||||||  | ||||||||||||||    
T  37897741 atacatcattaattgaatgaatctaaaatttagatttttgcttata 37897696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 50603589 - 50603646
Alignment:
Q  12 tccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||| |||||||| |  |||||| | |||||||||||||| ||||||    
T  50603589 tccacatacatcatttattgaatgaacttaaaaaatagatttttgcttataatagtga 50603646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 52215957 - 52216022
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||| | ||| || |||||||| || |||||||||||||| |||||| | ||||||    
T  52215957 ccacatacatcatttaatgagtgaatctaaaatgttgatttttgcttataatagtgaccggagggt 52216022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 54680551 - 54680518
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagt 47  Q
    |||||||||||||||||||||||| |||||||||    
T  54680551 cacatacatcattaattgaatgtacctaaaaagt 54680518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 1086591 - 1086635
Alignment:
Q  18 tacatcattaattgaatgtatctaaaaagtggatttttgcttata 62  Q
    ||||||||| |||||||| |||||||||||| |||||| ||||||    
T  1086591 tacatcatttattgaatgaatctaaaaagtgaatttttacttata 1086635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 12568517 - 12568465
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||| ||| || ||||||| |||||||| |||||||| ||||||||||||    
T  12568517 atacatctttagttaaatgtatttaaaaagtagatttttgtttatattagtga 12568465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 13544981 - 13544929
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||| ||| || ||||||| |||||||| |||||||| ||||||||||||    
T  13544981 atacatctttagttaaatgtatttaaaaagtagatttttgtttatattagtga 13544929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 26104833 - 26104781
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||| |||||| | |||||| ||  ||||||||||||||||||||    
T  26104833 atacatcattaaatgaatgaacctaaaatgtaaatttttgcttatattagtga 26104781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 30519676 - 30519740
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||| | |||||| |||||||| || | |||||||||||| |||||| | ||||||    
T  30519676 cacatacatcatttaatgaatgaatctaaaatgttggtttttgcttataatagtgaccagagggt 30519740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 31706674 - 31706618
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    |||||||||||  |||||||| ||||||||  || ||||||||||||||| ||||||    
T  31706674 acatacatcatatattgaatgaatctaaaatatgaatttttgcttatatttgtgatc 31706618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 39579588 - 39579628
Alignment:
Q  31 gaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    ||||| ||||||||||| |||||||||||||| ||||||||    
T  39579588 gaatgaatctaaaaagttgatttttgcttataatagtgatc 39579628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 40628746 - 40628793
Alignment:
Q  16 catacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 64  Q
    |||||||||||| ||||||| |||||||||||  |||||||||||||||    
T  40628746 catacatcattagttgaatgaatctaaaaagt-tatttttgcttatatt 40628793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 5574187 - 5574252
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||    
T  5574187 ccacatacatcattaattgaatgtatctaaaaagtagatttttgcttatattagtgaccggagggt 5574252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 34248496 - 34248557
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  34248496 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccagagggt 34248557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 34248476 - 34248422
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34248476 acatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtga 34248422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 38598018 - 38598087
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| | |||||| ||||    
T  38598018 cacatacatcattaattgaatgtatctaaaaaatagatttttgcttatattagtgaccggagggtgtatt 38598087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 3887894 - 3887826
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    ||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||| ||||    
T  3887894 acataaatcattaattgaatgtatctaaaaaatagatttttgcttatattagtgatcagagggtgtatt 3887826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 3887911 - 3887975
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||| | ||||||    
T  3887911 cacatacatcattaattgaatgtatctaaaaagatgatttttgcttatattagtgaccggagggt 3887975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 38594422 - 38594486
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| | ||||||    
T  38594422 cacatacatcattaattgaatgtatctaaaaaatagatttttgcttatattagtgaccggagggt 38594486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 43426691 - 43426635
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  43426691 ccacatacatcattaattgaatgtatttaaaaagtggatttttacttatattagtga 43426635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 6566995 - 6567048
Alignment:
Q  16 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  6566995 catacatcattaattgaatatatctaaatagtggatttttgcttatattagtga 6567048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 30902350 - 30902406
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  30902350 ccacatatatcattaattgaatgtatctaaaaagtaaatttttgcttatattagtga 30902406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 1981062 - 1981117
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  1981062 cacatacatcattaattgaatgtatctaaaaatgagatttttgcttatattagtga 1981117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 1981048 - 1980983
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||| | ||||||    
T  1981048 ccacataaatcattaattgaatgtatttaaaatgtggaattttgcttatattagtgaccggagggt 1980983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 30902335 - 30902282
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 67  Q
    ||||||||||||||||||||||||| |||||| || ||||||||||||||||||    
T  30902335 cacatacatcattaattgaatgtatttaaaaaatgaatttttgcttatattagt 30902282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 38594407 - 38594342
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||| | ||||||    
T  38594407 ccacatatatcattagttgaatgtatctaaagagtagatttttgcttatattagtgaccggagggt 38594342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 38598003 - 38597938
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||| | ||||||    
T  38598003 ccacatatatcattagttgaatgtatctaaagagtagatttttgcttatattagtgaccggagggt 38597938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 5574172 - 5574108
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||| |||||||||||||||||| | ||||||| |||||||||||||||||||| | ||||||    
T  5574172 cacatatatcattaattgaatgtattttaaaagtgaatttttgcttatattagtgaccggagggt 5574108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 20504302 - 20504250
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||| |||||||||||| |||||||| ||||||||||||    
T  20504302 atacatcattaattgaatatatctaaaaagtagatttttgtttatattagtga 20504250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 3714274 - 3714223
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattag 66  Q
    |||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  3714274 acatacataattaattgaatgtatctaaaaagtggttttttacttatattag 3714223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 27331838 - 27331892
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||||| |||||||| || |||||||||||||| ||||||    
T  27331838 acatacatcattaattgaatgaatctaaaatgttgatttttgcttataatagtga 27331892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 44274620 - 44274674
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||| |||||||| |||||||||||| |||||||||||||| |||||    
T  44274620 acatacatcatttattgaatgaatctaaaaagtgaatttttgcttatatcagtga 44274674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 22373687 - 22373744
Alignment:
Q  13 ccacatacatcattaattgaatgtatct-aaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||| ||||||||||| ||||| | |||||||||||||||||||||    
T  22373687 ccacatacatcattaactgaatgtatctaaaaaattagatttttgcttatattagtga 22373744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 13333508 - 13333452
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    |||||||||||| | ||||||||||||||| || |||||||||||||| ||||||||    
T  13333508 acatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtgatc 13333452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 38618176 - 38618240
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||| || | ||||||| ||||||||| ||| | ||||||    
T  38618176 cacatacatcattaattgaatgtatctaacaaatagatttttacttatattaatgaccggagggt 38618240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 43426706 - 43426770
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||| ||||||||||||||||||||||||| |  |||||||||||||||| ||| | ||||||    
T  43426706 cacatatatcattaattgaatgtatctaaaaaataaatttttgcttatattaatgaccggagggt 43426770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 14308721 - 14308650
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctattat 85  Q
    ||||||||||||| |||||||| ||||||||  || || |||||||||||| |||||| |||||| ||||||    
T  14308721 cacatacatcatttattgaatgaatctaaaacatgaatgtttgcttatatttgtgatcggagggtgtattat 14308650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 25278236 - 25278185
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    ||||||||||||||||| ||||||||||||| ||  ||||||||||||||||    
T  25278236 cacatacatcattaattaaatgtatctaaaaggtaaatttttgcttatatta 25278185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 25270917 - 25270863
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||| | ||||||||||||||| || |||||||||||||| ||||||    
T  25270917 acatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtga 25270863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 1961386 - 1961447
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccga 74  Q
    |||||||||||||| | |||||| |||||||| || |||||||||||||| |||||| ||||    
T  1961386 ccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgacccga 1961447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 3714291 - 3714347
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    |||||||||||||||||| || || |||||||||| |||||||| |||||||||||||    
T  3714291 cacatacatcattaattggatatacctaaaaagtgaatttttgc-tatattagtgatc 3714347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 26003516 - 26003561
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttata 62  Q
    ||||||||||||||||||| |||||||| || ||||||||||||||    
T  26003516 atacatcattaattgaatgaatctaaaatgtagatttttgcttata 26003561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 7837140 - 7837092
Alignment:
Q  21 atcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||||||   |||||||| ||||||||||||    
T  7837140 atcattaattgaatgtatctaaaaatgagatttttgtttatattagtga 7837092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 22373669 - 22373617
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||| ||| |||||| |  ||||||||||||||||||||    
T  22373669 atacatcattaattgaatatatttaaaaaatatatttttgcttatattagtga 22373617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 26836234 - 26836286
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 67  Q
    ||||| |||||| |||||||| ||||||||  |||||||||||||||||||||    
T  26836234 acataaatcatttattgaatgaatctaaaatatggatttttgcttatattagt 26836286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 31024234 - 31024178
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  31024234 ccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 31024178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 38465870 - 38465922
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||| |||||||| || |||||||||||| | ||||||    
T  38465870 atacatcattaattgaatgaatctaaaatgtagatttttgcttacaatagtga 38465922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 41056949 - 41056893
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    |||||||||||| | |||||||||||||||  | |||||||||||||| ||||||||    
T  41056949 acatacatcatttaatgaatgtatctaaaacattgatttttgcttataatagtgatc 41056893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 14308725 - 14308788
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||| |||||||| ||||||||  ||  |||||||||||||| |||||| ||||||    
T  14308725 acatacatcatttattgaatgaatctaaaatatgattttttgcttatatttgtgatcggagggt 14308788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 48
Target Start/End: Original strand, 20504324 - 20504355
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtg 48  Q
    ||||||||||||||||||||||||||||||||    
T  20504324 atacatcattaattgaatgtatctaaaaagtg 20504355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 41824322 - 41824267
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgat 70  Q
    |||||||| ||| |||||||| ||||||||| || ||||||||||||| |||||||    
T  41824322 acatacataatttattgaatgaatctaaaaaatgaatttttgcttataatagtgat 41824267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 3123982 - 3124036
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||| |||||||| ||||||||  || ||||||||||||||| ||||    
T  3123982 acatacatcatttattgaatgaatctaaaacatgaatttttgcttatatttgtga 3124036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 11342051 - 11342105
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    |||||||||||||| |||| ||||||||  | |||||||||||||| ||||||||    
T  11342051 atacatcattaattaaatgaatctaaaatatagatttttgcttataatagtgatc 11342105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 19612997 - 19612939
Alignment:
Q  20 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||| |||||| ||||||||  | ||||||||||||||||||||| | ||||||    
T  19612997 catcattaaatgaatgaatctaaaatatagatttttgcttatattagtgaccggagggt 19612939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 24457163 - 24457093
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    |||||||||||||||| |||||| | |||||| ||   ||||||||||||||||||| | |||||| ||||    
T  24457163 ccacatacatcattaaatgaatgaacctaaaatgtaattttttgcttatattagtgaccggagggtgtatt 24457093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 27743693 - 27743727
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  27743693 ccacatacatcattaattgaatgaatctaaaaagt 27743727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 38465852 - 38465782
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    |||||||||||||| | |||||  |||||||| || |||||||||||||| |||||| | |||||| ||||    
T  38465852 ccacatacatcatttaatgaattaatctaaaatgttgatttttgcttataatagtgaccggagggtgtatt 38465782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 42579096 - 42579130
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  42579096 ccacatacatcattaattgaatgaatctaaaaagt 42579130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 921878 - 921845
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagt 47  Q
    |||||||||||||||||||||| |||||||||||    
T  921878 cacatacatcattaattgaatgaatctaaaaagt 921845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 3098206 - 3098259
Alignment:
Q  16 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  3098206 catacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtga 3098259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 3121511 - 3121564
Alignment:
Q  25 ttaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||| |||||||| || |||||||||||||| |||||| | ||||||    
T  3121511 ttaattgaatggatctaaaatgtagatttttgcttataatagtgaccggagggt 3121564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 8740575 - 8740526
Alignment:
Q  20 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||| |||||| |||||||| || |||||||||||||| ||||||    
T  8740575 catcattaaatgaatgaatctaaaatgtagatttttgcttataatagtga 8740526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 15119858 - 15119919
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||| |||||  |||||||| || |||||||||||||| |||||| | ||||||    
T  15119858 atacatcattaaatgaataaatctaaaatgtagatttttgcttataatagtgaccggagggt 15119919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 15859632 - 15859677
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttata 62  Q
    ||||||||||||||||||| ||||||||  | ||||||||||||||    
T  15859632 atacatcattaattgaatgaatctaaaatatagatttttgcttata 15859677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 17866259 - 17866308
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 64  Q
    |||||||| ||| |||||||| ||||||||  ||||||||||||||||||    
T  17866259 acatacataatttattgaatgaatctaaaacatggatttttgcttatatt 17866308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 20195351 - 20195318
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagt 47  Q
    |||||||||||||||||||||| |||||||||||    
T  20195351 cacatacatcattaattgaatgaatctaaaaagt 20195318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 21183404 - 21183453
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttata 62  Q
    |||||||||||||| | |||||| |||||||| || ||||||||||||||    
T  21183404 ccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttata 21183453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 25270936 - 25270989
Alignment:
Q  16 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  25270936 catacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtga 25270989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 28680916 - 28680949
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaag 46  Q
    ||||||||||||||||||||||| ||||||||||    
T  28680916 ccacatacatcattaattgaatgaatctaaaaag 28680949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 29771780 - 29771747
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagt 47  Q
    |||||||||||||||||||||| |||||||||||    
T  29771780 cacatacatcattaattgaatgaatctaaaaagt 29771747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 41056968 - 41057021
Alignment:
Q  16 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  41056968 catacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtga 41057021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 6566974 - 6566922
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||| ||||||| ||| |||||||||||||  |||||||| ||||||||||    
T  6566974 atacattattaattaaatatatctaaaaagtgattttttgctcatattagtga 6566922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 15119840 - 15119784
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| | |||||| |||||||| ||  ||||||||||||| ||||||    
T  15119840 ccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtga 15119784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 21488104 - 21488156
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    |||||||||||||||| |||||| |||||||| ||   |||||||||||||||    
T  21488104 ccacatacatcattaaatgaatgaatctaaaatgtaattttttgcttatatta 21488156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 23143567 - 23143619
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||| |||||||  | ||||||||| |||||||||||||| ||||||    
T  23143567 atacatcatttattgaataaacctaaaaagttgatttttgcttataatagtga 23143619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 23555357 - 23555409
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||| |||||||  | ||||||||| |||||||||||||| ||||||    
T  23555357 atacatcatttattgaataaacctaaaaagttgatttttgcttataatagtga 23555409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 32473534 - 32473502
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaa 45  Q
    ||||||||||||||||||||||| |||||||||    
T  32473534 ccacatacatcattaattgaatgaatctaaaaa 32473502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 36490542 - 36490510
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaa 45  Q
    ||||||||||||||||||||||| |||||||||    
T  36490542 ccacatacatcattaattgaatgaatctaaaaa 36490510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 38181841 - 38181909
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctattat 85  Q
    ||||||||||||||||||| || ||||| || | |||||||||||| |||| | | |||||| ||||||    
T  38181841 atacatcattaattgaatgaatgtaaaatgtagttttttgcttataatagtaaccggagggtgtattat 38181909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 71
Target Start/End: Complemental strand, 38618147 - 38618119
Alignment:
Q  43 aaagtggatttttgcttatattagtgatc 71  Q
    |||||||||||||||||||||||||||||    
T  38618147 aaagtggatttttgcttatattagtgatc 38618119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 41824337 - 41824393
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| |||||||| | |||||||||  |||||| |||||| ||||||    
T  41824337 ccacatacatcatttattgaatgaacctaaaaagtcaatttttacttatagtagtga 41824393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 44587720 - 44587776
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||| | ||| |||| ||||||||||| | |||||||||||| ||||||    
T  44587720 ccacatacatcactcattcaatgaatctaaaaagtagttttttgcttataatagtga 44587776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 45472471 - 45472415
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    |||||||||||| |||||||| || ||||||||  |||||| |||||| ||||||||    
T  45472471 acatacatcatttattgaatgaatttaaaaagtaaatttttacttataatagtgatc 45472415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 120208 - 120136
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctattat 85  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||| | |||||| ||||||    
T  120208 ccacatacatcattaattgaatgtatctaaaaagtgaaattttgcttatattagtgaccggagggtgtattat 120136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 120223 - 120287
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||| | ||||||    
T  120223 cacatacatcattaattgaatgtatctaaaaagtaaatttttgcttatattagtgaccggagggt 120287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 38238862 - 38238926
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||    
T  38238862 cacatacatcattaattgaatgtatctaaaaagtagatttttgcttatattagtgaccggagggt 38238926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 46944006 - 46943942
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||    
T  46944006 cacatacatcattaattgaatgtatctaaaaagtggatttttgtttatattagtgaccggagggt 46943942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 25079269 - 25079214
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25079269 cacatacatcattaattgaatgtatctaaaaagtagatttttgcttatattagtga 25079214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 29498846 - 29498776
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||| |||||| ||||    
T  29498846 ccacatacatcattaattgaatatatctaaaatgtggatttttgcttatattattgatcggagggtttatt 29498776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 34703524 - 34703585
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||    
T  34703524 atacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtgaccggagggt 34703585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 40416987 - 40417039
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40416987 atacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtga 40417039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 25079285 - 25079340
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  25079285 cacatacatcattaattgaatgtatctaaaaagtagatttttgtttatattagtga 25079340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 4406478 - 4406424
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  4406478 acatacatcattaattgaatgtatctaaaaagtgaatttttgcatatattagtga 4406424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 38238847 - 38238781
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtg-gatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| | ||||||    
T  38238847 ccacatacatcattaattgaatgtatctaaaaagtgaaatttttgcttatattagtgaccggagggt 38238781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 22106745 - 22106814
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    |||||||||||||||||||||||||||||||| || | ||||| |||||||||||||| |||||| ||||    
T  22106745 cacatacatcattaattgaatgtatctaaaaaatgaaattttgtttatattagtgatcagagggtgtatt 22106814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 40529606 - 40529537
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    |||||||||||||||||||||||||||||||| || | ||||| |||||||||||||| |||||| ||||    
T  40529606 cacatacatcattaattgaatgtatctaaaaaatgaaattttgtttatattagtgatcagagggtgtatt 40529537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 22106730 - 22106674
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||| |||||||||| | |||||||||||||||||||||    
T  22106730 ccacatacatcattaattgaatatatctaaaaaatagatttttgcttatattagtga 22106674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 27554575 - 27554639
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||| | ||||||  |||||||||||||||||||||| ||||||    
T  27554575 cacatacatcattaattgaatgtattttaaaagtaaatttttgcttatattagtgatcggagggt 27554639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 40529621 - 40529677
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||| |||||||||| | |||||||||||||||||||||    
T  40529621 ccacatacatcattaattgaatatatctaaaaaatagatttttgcttatattagtga 40529677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 6455626 - 6455696
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    |||||||||||||||| |||||| | |||||| || ||||||||||||||||||||||| |||||| ||||    
T  6455626 ccacatacatcattaaatgaatgaacctaaaatgtagatttttgcttatattagtgatcggagggtgtatt 6455696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 21387637 - 21387583
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  21387637 acatacatcattaattgaatgaatctagaaaatggatttttgcttatattagtga 21387583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 716312 - 716365
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 67  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||||||||||    
T  716312 cacatacatcattaattgaatgtatctaaaaattaaatttttgcttatattagt 716365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 2456400 - 2456335
Alignment:
Q  12 tccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgaggg 77  Q
    ||||||||||||||||||| |||| | ||||||||| |||||||||||||| |||||||| |||||    
T  2456400 tccacatacatcattaattcaatgaacctaaaaagtagatttttgcttataatagtgatcggaggg 2456335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 1706895 - 1706831
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||||||| |  |||||| ||||||||||||| | ||||||    
T  1706895 cacatacatcattaattgaatgtatctaaaaaataaatttttacttatattagtgaccggagggt 1706831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 1706914 - 1706966
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||| |||||||||||||||| || ||||||||||||||||||||    
T  1706914 atacatcattaaatgaatgtatctaaaaaatgaatttttgcttatattagtga 1706966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 41872128 - 41872184
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||| |||||| |||||||| || |||||||||||||||||||||    
T  41872128 ccacatacatcattaaatgaatgaatctaaaatgtagatttttgcttatattagtga 41872184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 45000678 - 45000734
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||| |||||||||| ||||||||||  ||||||||||||||||||||    
T  45000678 ccacatacatcatcaattgaatgtgtctaaaaagtacatttttgcttatattagtga 45000734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 18234423 - 18234478
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||||||||||||| |  ||||||| ||||||||||||    
T  18234423 cacatacatcattaattgaatgtatctaaaaattaaatttttgtttatattagtga 18234478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 22281502 - 22281443
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagg 76  Q
    |||||||||||||||||| |||||||||| | |||||||| |||||||||||||| ||||    
T  22281502 atacatcattaattgaatatatctaaaaattagatttttgtttatattagtgatcggagg 22281443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 29498861 - 29498912
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||||||||||    
T  29498861 cacatacataattaattaaatgtatctaaaaaatggatttttgcttatatta 29498912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 24936610 - 24936664
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 67  Q
    |||||||||||||||||||||| ||||||||||||| ||||||  ||||||||||    
T  24936610 ccacatacatcattaattgaatatatctaaaaagtgaatttttatttatattagt 24936664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 4407713 - 4407761
Alignment:
Q  30 tgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||| |||||||||||| | ||||||    
T  4407713 tgaatgtatctaaaaagtggatttttgtttatattagtgaccggagggt 4407761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 40416968 - 40416904
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||| ||||||||||||||||||||||||  ||| |||||||||||||||| ||| | ||||||    
T  40416968 cacatgcatcattaattgaatgtatctaaattgtgaatttttgcttatattaatgaccggagggt 40416904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 7430962 - 7431013
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    |||||||||||||||||||||||||||||||||| | |||||  ||||||||    
T  7430962 cacatacatcattaattgaatgtatctaaaaagtagttttttatttatatta 7431013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 27554559 - 27554504
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||||||||||||| |  ||||||  ||||||||||||    
T  27554559 cacatacatcattaattgaatgtatctaaaaaataaatttttatttatattagtga 27554504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 34703505 - 34703454
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    ||||| ||||||||||||||||||||||||  ||| ||||||||||||||||    
T  34703505 cacatgcatcattaattgaatgtatctaaattgtgaatttttgcttatatta 34703454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 46944016 - 46944066
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    ||||||||||||||||||||||||||||||| |  |||||| |||||||||    
T  46944016 acatacatcattaattgaatgtatctaaaaattaaatttttacttatatta 46944066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 7701267 - 7701320
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtg 68  Q
    |||||||||||| | ||||||||||||||| || |||||||||||||| |||||    
T  7701267 acatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtg 7701320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 12274872 - 12274807
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||| |||||||| |  ||||| ||||||||||||||||| |||||| | ||||||    
T  12274872 ccacatacatcatttattgaatgaacataaaatgtggatttttgcttataatagtgaccagagggt 12274807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 25245220 - 25245285
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||| | |||||| |||||||| || |||||||||||||| |||||| | ||||||    
T  25245220 ccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgaccggagggt 25245285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 45000663 - 45000614
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatat 63  Q
    |||| ||||||||||||||||||||||| ||| | |||||||||||||||    
T  45000663 cacacacatcattaattgaatgtatctagaaaatagatttttgcttatat 45000614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 2943275 - 2943219
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  2943275 ccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 2943219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 34275254 - 34275198
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||| |||||| | |||||| || | |||||||||||||||||||    
T  34275254 ccacatacatcattaaatgaatgaacctaaaatgtagttttttgcttatattagtga 34275198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 24936595 - 24936544
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    |||| |||| |||||||||||||||| |||||||| ||||||| ||||||||    
T  24936595 cacagacataattaattgaatgtatccaaaaagtgaatttttgtttatatta 24936544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 31417595 - 31417650
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||| |||||||| ||||||||  || ||||||||||||||| ||||    
T  31417595 cacatacatcatttattgaatgaatctaaaacatgaatttttgcttatatttgtga 31417650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 34840675 - 34840628
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttata 62  Q
    |||||||||||| |||||||| |||||||||||| | |||||||||||    
T  34840675 acatacatcatttattgaatgaatctaaaaagtgaacttttgcttata 34840628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 3498357 - 3498323
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  3498357 ccacatacatcattaattgaatgaatctaaaaagt 3498323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 6455605 - 6455547
Alignment:
Q  20 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||| |||||| |||||||| ||  ||||||||||||| |||||||| ||||||    
T  6455605 catcattaaatgaatgaatctaaaatgtaaatttttgcttataatagtgatcggagggt 6455547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 10599067 - 10599125
Alignment:
Q  11 atccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||| |||||||| | ||||||| | ||||||| |||||| ||||||    
T  10599067 atccacatacatcatttattgaatgaacctaaaaaatagatttttacttataatagtga 10599125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 11602846 - 11602900
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||| |||||||| |||||||||||| | ||||| ||||| ||||||    
T  11602846 acatacatcatttattgaatgaatctaaaaagtgaacttttgtttataatagtga 11602900  T

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Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 22281522 - 22281572
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    |||| ||||||||||| ||||||| ||||||||  ||||||||||||||||    
T  22281522 acattcatcattaattcaatgtatttaaaaagtaaatttttgcttatatta 22281572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 24935947 - 24935885
Alignment:
Q  21 atcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    |||||||| |||||| | |||||| || ||||||||||||||||||||| | |||||| ||||    
T  24935947 atcattaaatgaatgaacctaaaatgtagatttttgcttatattagtgaccggagggtgtatt 24935885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 25774261 - 25774315
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||| | |||||| |||||||| ||| ||||||||||||| ||||||    
T  25774261 acatacatcatttagtgaatgaatctaaaatgtgtatttttgcttataatagtga 25774315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 43813202 - 43813248
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgctt 59  Q
    |||||||||||||| |||||||| |||||| |||| |||||||||||    
T  43813202 ccacatacatcatttattgaatgaatctaagaagttgatttttgctt 43813248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 46022609 - 46022555
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||| || | ||||||||||||||| || |||||||||||||| ||||||    
T  46022609 acatacatcctttaatgaatgtatctaaaacgttgatttttgcttataatagtga 46022555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 3967781 - 3967838
Alignment:
Q  12 tccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||| ||| |||| | ||||||||| | |||||||||||| ||||||    
T  3967781 tccacatacatcatttattcaatgaacctaaaaagtagttttttgcttataatagtga 3967838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 4406142 - 4406077
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||| |||||| | |||||| || | ||||| ||||||||||||| | ||||||    
T  4406142 ccacatacatcattaaatgaatgaacctaaaatgtagtttttttcttatattagtgaccggagggt 4406077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 7701248 - 7701195
Alignment:
Q  16 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  7701248 catacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtga 7701195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 10095782 - 10095717
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||| | |||||| |||||||| ||  ||||||||||||| |||||| | ||||||    
T  10095782 ccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtgaccggagggt 10095717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 10415016 - 10415081
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||| |||||| |  |||||  | | ||||||||||||||||||||| ||||||    
T  10415016 ccacatacatcattaaatgaatgaacataaaatatagttttttgcttatattagtgatcggagggt 10415081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 15051142 - 15051081
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||| |||||||||||||||||  |  ||||||||||||||| |||| | ||||||    
T  15051142 atacatcatttattgaatgtatctaaaacataaatttttgcttatatttgtgaccggagggt 15051081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 28949352 - 28949417
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||| |||||| | ||| || || | ||||||||||||||||||| | ||||||    
T  28949352 ccacatacatcattaaatgaatgaacctagaatgtagttttttgcttatattagtgaccggagggt 28949417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 46658810 - 46658843
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagt 47  Q
    |||||||||||||||||||||| |||||||||||    
T  46658810 cacatacatcattaattgaatgaatctaaaaagt 46658843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 716293 - 716265
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaa 45  Q
    |||||||||||||||||||||||||||||    
T  716293 atacatcattaattgaatgtatctaaaaa 716265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 8169175 - 8169227
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 67  Q
    |||||||||||| |||||||| |||||||||||  | ||||||||||| ||||    
T  8169175 acatacatcatttattgaatgaatctaaaaagttaacttttgcttataatagt 8169227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 20353156 - 20353188
Alignment:
Q  15 acatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||| |||||||||||    
T  20353156 acatacatcattaattgaatgaatctaaaaagt 20353188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 23818483 - 23818431
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  23818483 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 23818431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 24280902 - 24280954
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||| || ||||| || ||||||| |||||| ||||||    
T  24280902 atacatcattaattgaatgaatttaaaatgtagatttttacttataatagtga 24280954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 31813470 - 31813418
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||||||||||||| |||||||| ||  ||||||| ||||| ||||||    
T  31813470 atacatcattaattgaatgaatctaaaatgtaaatttttgtttataatagtga 31813418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 33471553 - 33471521
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaa 45  Q
    ||||||||||||||||||||||| |||||||||    
T  33471553 ccacatacatcattaattgaatgaatctaaaaa 33471521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 36427748 - 36427776
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaa 45  Q
    |||||||||||||||||||||||||||||    
T  36427748 atacatcattaattgaatgtatctaaaaa 36427776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 41508687 - 41508738
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 65  Q
    |||||||||||||||| |||||| |||||||||||  |||||| |||||||||    
T  41508687 ccacatacatcattaaatgaatgaatctaaaaagtcaattttt-cttatatta 41508738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 54465 - 54523
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 71  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  54465 ccacatacatcattaattgaatgtatctaaagagtgaatttttgcttatattagtgatc 54523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 54447 - 54397
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 67  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  54447 atacatcattaattgaatgtatctaaaaagtagatttttgcttatattagt 54397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 61225 - 61156
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 83  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||| | |||||| ||||    
T  61225 cacatacatcattaattgaatgtatctaaaaaagggatttttgcttatattagtgaccggagggtgtatt 61156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 61239 - 61304
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| | ||||||    
T  61239 ccacatacatcattaattgaatgtatctaaaatgtggatttttgtttatattagtgaccggagggt 61304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 246858 - 246802
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  246858 ccacatacatcattaattgaatgtatctaaaaagtaaatttttgcttatattagtga 246802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 246876 - 246937
Alignment:
Q  17 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||||    
T  246876 atacatcattaattgaatgtatctaaaaagtagatttttgcttatattaatgaccagagggt 246937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 4013 - 3948
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||||||||||| | ||||||| ||||||||| |||||||||||||||||||| | ||||||    
T  4013 ccacatacatcattaaattaatgtatttaaaaagtgtatttttgcttatattagtgaccggagggt 3948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 4028 - 4092
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    |||||||| |||| ||||||||||||||||||||  |||||||||||||||||||| | ||||||    
T  4028 cacatacaacatttattgaatgtatctaaaaagtaaatttttgcttatattagtgaccagagggt 4092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 17228 - 17165
Alignment:
Q  14 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 78  Q
    ||||||||||||||||||||| ||| |||||||| || |||||||||||||||||| | ||||||    
T  17228 cacatacatcattaattgaatatatataaaaagt-gaattttgcttatattagtgaccggagggt 17165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 13758 - 13724
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagt 47  Q
    ||||||||||||||||||||||| |||||||||||    
T  13758 ccacatacatcattaattgaatgaatctaaaaagt 13724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 7741 - 7790
Alignment:
Q  20 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    ||||||||| |||||| |||||||| || |||||||||||||| ||||||    
T  7741 catcattaaatgaatgaatctaaaatgtagatttttgcttataatagtga 7790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 22362 - 22315
Alignment:
Q  16 catacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 64  Q
    ||||||||||||| |||||| |||||||||||| |||||| ||||||||    
T  22362 catacatcattaaatgaatgaatctaaaaagtgaattttt-cttatatt 22315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 139373 - 139429
Alignment:
Q  13 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 69  Q
    |||||||||||||||| |||||| |||||||| ||   ||||||||||||| |||||    
T  139373 ccacatacatcattaaatgaatgaatctaaaatgtaattttttgcttatatgagtga 139429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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