View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7488_high_3 (Length: 240)
Name: NF7488_high_3
Description: NF7488
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7488_high_3 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 4310875 - 4310651
Alignment:
| Q |
1 |
taatagtataagagttgtgttattaaaaagaaaaggtcttagaatgcacaacctggaatttaatgaaacaagcatgatgattaaacatattattttccaa |
100 |
Q |
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| T |
4310875 |
taatagtataagagttgcgttattaaaaagaaaaggtcttagaatgcacaccctggaatttaatgaaacaagcatgatgattaaacatattattttccaa |
4310776 |
T |
|
| Q |
101 |
atttaagtttaataattgattgttatcatagaaaagcaaatcttgataaaccttaaaacttcaattctttaatgcctctgttatgagtttagtcttaggg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
4310775 |
atttaagtttaataattgattgttatcatagaaaagcaaatcttgataaaccttaaaacttcaattctttaatgcctctgttatgagtttagttttaggg |
4310676 |
T |
|
| Q |
201 |
cgattaattaatctatttcatgttg |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
4310675 |
cgattaattaatctatttcatgttg |
4310651 |
T |
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