View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7489_high_23 (Length: 325)
Name: NF7489_high_23
Description: NF7489
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7489_high_23 |
 |  |
|
Alignment Details
Target: chr6 (Bit Score: 258; Significance: 1e-143; HSPs: 15)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 13 - 302
Target Start/End: Complemental strand, 1832241 - 1831952
Alignment:
| Q |
13 |
aatatgcattcattgcttcactagtgttctcttggtttcttccatcagtgaattcacttacccctacagcctaagagcgtagtttacaaagctcaaaaca |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1832241 |
aatatgcattcattgcttcactagtgttctcttggtttcttccatcagtgaattcacttacccctacagcctaagagcgtagtttacaaagctcaaaaca |
1832142 |
T |
 |
| Q |
113 |
tctttgacgtgtgtaatttgagtttgaatttctactcaaggtcataaaatcctcaatgagtgaataggcttgaggcttatgctttctaccccaaattgga |
212 |
Q |
| |
|
|| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
1832141 |
tcattgacgtgcgtaatttgagtttgaatttctactcaaggtcataaaatcctcaatgagtgaataggcttgaggcttatactctctaccccaaattgga |
1832042 |
T |
 |
| Q |
213 |
tcaatctttggaagcactgcaattcgtaagagaaagtatcctaaatgataatgatggtcgttcttaattccaaacccgaaatcaacacca |
302 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
1832041 |
tcaatctttgcaagcactgcaattccaaagagaaagtatcctaaatgataatgatggtcgttattaattccaaacccgaaatcaacacca |
1831952 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 257
Target Start/End: Complemental strand, 1827445 - 1827215
Alignment:
| Q |
13 |
aatatgcattcattgcttcactagtgttctcttggtttcttccatcagtgaattcacttacccctacagcctaagagcgtagtttacaaagctcaaaaca |
112 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||| ||||||||||||||||||||| ||| |||| ||||| ||||| |||||||||||||| ||||| | |
|
|
| T |
1827445 |
aatatgcattcattgcttcactagcgctctcttgatttcttccatcagtgaattcagttagccctccagcccaagagtgtagtttacaaagcacaaaata |
1827346 |
T |
 |
| Q |
113 |
tctttgacgtgtgtaatttgagtttgaatttctactcaaggtcataaaatcctcaatgagtgaataggcttgaggcttatgctttctaccccaaattgga |
212 |
Q |
| |
|
||| || ||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| | |
|
|
| T |
1827345 |
ccttaga--------------gttcgaatttctactcgaggtcataaaatcggcaatgagtgaataggcttgaggcttatattttctaccccaaattgaa |
1827260 |
T |
 |
| Q |
213 |
tcaatctttggaagcactgcaattcgtaagagaaagtatcctaaa |
257 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
1827259 |
tcaatctttgcaagcactgcaattcgatagagaaagtatcctaaa |
1827215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 15 - 268
Target Start/End: Original strand, 6465061 - 6465314
Alignment:
| Q |
15 |
tatgcattcattgcttcactagtgttctcttggtttcttccatcagtgaattcacttacccctacagcctaagagcgtagtttacaaagctcaaaacatc |
114 |
Q |
| |
|
|||||||||| ||||||||||| ||||||| ||||||||||| ||| ||| ||| |||| | ||| | || | | |||| |||| || ||||| | |
|
|
| T |
6465061 |
tatgcattcacagcttcactagtactctcttgatttcttccatctccgaactcagttaaccctccggcccacgaatgcaatttaaaaagatcgaaacacc |
6465160 |
T |
 |
| Q |
115 |
tttgacgtgtgtaatttgagtttgaatttctactcaaggtcataaaatcctcaatgagtgaataggcttgaggcttatgctttctaccccaaattggatc |
214 |
Q |
| |
|
|| |||| |||||||| ||||| | |||||| |||||| |||||||||| | ||||||||||| ||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
6465161 |
ttagacgggtgtaattcgagttcggatttctgctcaagttcataaaatcagccatgagtgaataagcttgaggcttatacttcctaccccaaattggatc |
6465260 |
T |
 |
| Q |
215 |
aatctttggaagcactgcaattcgtaagagaaagtatcctaaatgataatgatg |
268 |
Q |
| |
|
|||||||| |||||| ||||||| |||||||||||||||||||||||||||| |
|
|
| T |
6465261 |
aatctttgcaagcacagcaattccatagagaaagtatcctaaatgataatgatg |
6465314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 15 - 301
Target Start/End: Complemental strand, 6473493 - 6473207
Alignment:
| Q |
15 |
tatgcattcattgcttcactagtgttctcttggtttcttccatcagtgaattcacttacccctacagcctaagagcgtagtttacaaagctcaaaacatc |
114 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||||||||| | || || ||| |||| | ||| |||| | ||||| |||| |||||||| | |
|
|
| T |
6473493 |
tatgcattcacggcttcactagtactctcttggtttcttccatccgcaaactcggttaaccctccggcccaagaatgcagtttgtaaagatcaaaacacc |
6473394 |
T |
 |
| Q |
115 |
tttgacgtgtgtaatttgagtttgaatttctactcaaggtcataaaatcctcaatgagtgaataggcttgaggcttatgctttctaccccaaattggatc |
214 |
Q |
| |
|
|| | | || |||||||| || || ||| | ||||||||||||||||| || ||||||| ||||||||||||||||| || ||||||||| |||||| |
|
|
| T |
6473393 |
ttaaaggagtataatttgaattcgagtttttgctcaaggtcataaaatcttccatgagtgcataggcttgaggcttatatttcttaccccaaactggatc |
6473294 |
T |
 |
| Q |
215 |
aatctttggaagcactgcaattcgtaagagaaagtatcctaaatgataatgatggtcgttcttaattccaaacccgaaatcaacacc |
301 |
Q |
| |
|
|||||| | |||||||||||||| |||||||||| ||||||||||||||||| || || | |||||| |||||||||||| |||| |
|
|
| T |
6473293 |
aatcttagcaagcactgcaattccatagagaaagtaacctaaatgataatgatgatcattataaattccgaacccgaaatcagcacc |
6473207 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 302
Target Start/End: Complemental strand, 1839338 - 1839049
Alignment:
| Q |
15 |
tatgcattcattgcttcactagtgttctcttggtttcttccatcagtgaattcacttacccctacagcctaagagcgtagtttacaaagctcaaaacatc |
114 |
Q |
| |
|
|||||||||| || |||||||||| | ||||| ||||| ||||||| ||| || ||| |||| | ||| ||||| ||| |||| |||| || ||||| | |
|
|
| T |
1839338 |
tatgcattcactgattcactagtgctatcttgatttctaccatcagcgaactctgttagccctccggcccaagagtgtaatttataaagatctaaacacc |
1839239 |
T |
 |
| Q |
115 |
tttgacgtgtgtaatttgagtttgaatttctactcaaggtcataaaatcctcaatgagtgaataggcttgaggcttatgc----tttctaccccaaattg |
210 |
Q |
| |
|
|| ||| ||||||| ||||| ||||||||||| |||||||||||| ||||||||||||||| |||||||||| ||| |||||||||||| |
|
|
| T |
1839238 |
ttagacacatgtaattagagttcgaatttctacttgaggtcataaaatttgcaatgagtgaataggtttgaggcttaattaaattttataccccaaattg |
1839139 |
T |
 |
| Q |
211 |
gatcaatctttggaagcactgcaattcgtaagagaaagtatcctaaatgataatgatggtcgttcttaattccaaacccgaaatcaacacca |
302 |
Q |
| |
|
|||||||||||| |||||||||||| | ||||||| |||||||||||||||||||| || | | ||||||||||||||||||| ||||| |
|
|
| T |
1839138 |
gatcaatctttgt--gcactgcaattcattagagaaactatcctaaatgataatgatgctcatcataaattccaaacccgaaatcagcacca |
1839049 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 27 - 301
Target Start/End: Original strand, 6526109 - 6526386
Alignment:
| Q |
27 |
gcttcactagtgttctcttggtttcttccatcagtgaattcacttacccctacagcctaagagcgtagtttacaaagctcaaaacatctttgacgtgtgt |
126 |
Q |
| |
|
|||||||| || ||||||| |||||||||||||||||||| ||| |||| ||||| ||||| ||| |||| | || || ||||| ||| || | |||| |
|
|
| T |
6526109 |
gcttcactggtactctcttgatttcttccatcagtgaattctgttagccctccagcccaagagtgtaatttatacagatcgaaacaccttagatgcgtgt |
6526208 |
T |
 |
| Q |
127 |
aat---ttgagtttgaatttctactcaaggtcataaaatcctcaatgagtgaataggcttgaggcttatgctttctaccccaaattggatcaatctttgg |
223 |
Q |
| |
|
||| | | |||||||||||| |||| |||||||||| | |||| ||||||||||||| ||||| ||||||||||||||| ||||||||||| | |
|
|
| T |
6526209 |
aataactagggtttgaatttctgctcagattcataaaatcagccatgacagaataggcttgagacttatactttctaccccaaataggatcaatcttagc |
6526308 |
T |
 |
| Q |
224 |
aagcactgcaattcgtaagagaaagtatcctaaatgataatgatggtcgttcttaattccaaacccgaaatcaacacc |
301 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||| || || | || ||| ||||| |||||| |||| |
|
|
| T |
6526309 |
aagcactgcaattccatagagaaagtatcctaaatgataatgatgatcattataaactccgaacccaaaatcagcacc |
6526386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 15 - 268
Target Start/End: Original strand, 6457101 - 6457354
Alignment:
| Q |
15 |
tatgcattcattgcttcactagtgttctcttggtttcttccatcagtgaattcacttacccctacagcctaagagcgtagtttacaaagctcaaaacatc |
114 |
Q |
| |
|
|||||||||| ||||||||||| ||||||| ||||||||||| | ||||| ||| ||| ||||| |||| | | |||| |||| || ||||| | |
|
|
| T |
6457101 |
tatgcattcacagcttcactagtactctcttgatttcttccatctgcaaattcgattagtcctccagcccaagaatgaaatttataaagatcgaaacacc |
6457200 |
T |
 |
| Q |
115 |
tttgacgtgtgtaatttgagtttgaatttctactcaaggtcataaaatcctcaatgagtgaataggcttgaggcttatgctttctaccccaaattggatc |
214 |
Q |
| |
|
|| |||||| |||||||||||||| ||||| | ||| ||| ||||| | ||||||||||| |||||||| |||| |||||| |||||| |||||| |
|
|
| T |
6457201 |
ttaaacgtgtataatttgagtttgattttcttcctaagttcaggaaatctgccatgagtgaataagcttgaggtttatactttcttccccaagctggatc |
6457300 |
T |
 |
| Q |
215 |
aatctttggaagcactgcaattcgtaagagaaagtatcctaaatgataatgatg |
268 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
6457301 |
aatctttgcaagcactgcaattccatagagaaagtatcctaaatgataatgatg |
6457354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 124 - 261
Target Start/End: Complemental strand, 1845983 - 1845847
Alignment:
| Q |
124 |
tgtaatttgagtttgaatttctactcaaggtcataaaatcctcaatgagtgaataggcttgaggcttatgctttctaccccaaattggatcaatctttgg |
223 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
1845983 |
tgtaattagagtttgaatttctactca-ggtcataaaatctgcaatgagtaaataggcttgaggcttaaattttccaccccaaattggatcaatctttgc |
1845885 |
T |
 |
| Q |
224 |
aagcactgcaa-ttcgtaagagaaagtatcctaaatgat |
261 |
Q |
| |
|
|||||||| || ||||| |||||||||||| |||||||| |
|
|
| T |
1845884 |
aagcactgaaatttcgt-agagaaagtatcgtaaatgat |
1845847 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 61 - 267
Target Start/End: Complemental strand, 1842192 - 1841986
Alignment:
| Q |
61 |
tgaattcacttacccctacagcctaagagcgtagtttacaaagctcaaaacatctttgacgtgtgtaatttgagtttgaatttctactcaaggtcataaa |
160 |
Q |
| |
|
|||||||| ||| |||| |||| ||||| ||| ||||||||| || ||||| ||| ||| |||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
1842192 |
tgaattcagttagccctccagctcaagagtgtaatttacaaagatcgaaacaccttagacacgtgtcattagagtttgaatttctactcaaggtcataaa |
1842093 |
T |
 |
| Q |
161 |
atcctcaatgagtgaataggcttgaggcttatgctttctaccccaaattggatcaatctttggaagcactgcaattcgtaagagaaagtatcctaaatga |
260 |
Q |
| |
|
||||| |||||||||| |||||| || || |||| || ||||||||||||||||||| | | ||| |||||||| |||||||||| | ||||||| |
|
|
| T |
1842092 |
atccttcatgagtgaatccacttgagtctcatactttgtatcccaaattggatcaatcttagcatgcaatgcaattccatagagaaagtaacttaaatga |
1841993 |
T |
 |
| Q |
261 |
taatgat |
267 |
Q |
| |
|
|| |||| |
|
|
| T |
1841992 |
tattgat |
1841986 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 13035966 - 13035906
Alignment:
| Q |
241 |
agagaaagtatcctaaatgataatgatggtcgttcttaattccaaacccgaaatcaacacc |
301 |
Q |
| |
|
|||||||||| |||||||||||||||||||| || | ||||||||||||||||||| |||| |
|
|
| T |
13035966 |
agagaaagtaacctaaatgataatgatggtcattataaattccaaacccgaaatcagcacc |
13035906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 302
Target Start/End: Complemental strand, 1827206 - 1827156
Alignment:
| Q |
252 |
cctaaatgataatgatggtcgttcttaattccaaacccgaaatcaacacca |
302 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||||||||||| ||||| |
|
|
| T |
1827206 |
cctaaatgataatgatggtcgttataaattccaaacccgaaatcagcacca |
1827156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 302
Target Start/End: Complemental strand, 1822370 - 1822309
Alignment:
| Q |
241 |
agagaaagtatcctaaatgataatgatggtcgttcttaattccaaacccgaaatcaacacca |
302 |
Q |
| |
|
||||||||||| ||||||||||||||||||| || | ||||| |||||| |||||| ||||| |
|
|
| T |
1822370 |
agagaaagtattctaaatgataatgatggtcattataaattcaaaacccaaaatcagcacca |
1822309 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 156
Target Start/End: Complemental strand, 1828331 - 1828190
Alignment:
| Q |
15 |
tatgcattcattgcttcactagtgttctcttggtttcttccatcagtgaattcacttacccctacagcctaagagcgtagtttacaaagctcaaaacatc |
114 |
Q |
| |
|
|||||||||| ||| ||||||||| ||||||| ||||| ||||||| |||||| ||| |||| | ||| ||||| ||| |||| |||| || ||||| | |
|
|
| T |
1828331 |
tatgcattcactgcatcactagtgctctcttgatttctaccatcagcgaattctgttagccctccggcccaagagtgtaatttataaagatcgaaacacc |
1828232 |
T |
 |
| Q |
115 |
tttgacgtgtgtaatttgagtttgaatttctactcaaggtca |
156 |
Q |
| |
|
| ||| |||||||| ||| || |||||||||||||||| |
|
|
| T |
1828231 |
tcagacacgtgtaattattgttagagtttctactcaaggtca |
1828190 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 302
Target Start/End: Original strand, 6505319 - 6505495
Alignment:
| Q |
126 |
taatttgagtttgaatttctactcaaggtcataaaatcctcaatgagtgaataggcttgaggcttatgctttctaccccaaattggatcaatctttggaa |
225 |
Q |
| |
|
||||||||||| || | | | || ||| |||||||||| || | |||||||||||||||| ||||| || |||||||| ||||||| |||||| || |
|
|
| T |
6505319 |
taatttgagttcgattctatgcttaagttcataaaatcttccacaagtgaataggcttgagccttatatttcctaccccatgttggatcgatctttacaa |
6505418 |
T |
 |
| Q |
226 |
gcactgcaatt-cgtaagagaaagtatcctaaatgataatgatggtcgttcttaattccaaacccgaaatcaacacca |
302 |
Q |
| |
|
||||||| ||| ||||| ||||| |||||||| ||| | ||||| || || | |||||| || ||||||||| ||||| |
|
|
| T |
6505419 |
gcactgctattgcgtaa-agaaaatatcctaagtgaaagtgatgatcattgtaaattccgaaaccgaaatcaccacca |
6505495 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 268
Target Start/End: Complemental strand, 6516446 - 6516304
Alignment:
| Q |
126 |
taatttgagtttgaatttctactcaaggtcataaaatcctcaatgagtgaataggcttgaggcttatgctttctaccccaaattggatcaatctttggaa |
225 |
Q |
| |
|
||||||||||| || ||| ||| ||| ||||||| || || || |||||||||| ||| ||||| ||| |||||||| |||||||||||| || |
|
|
| T |
6516446 |
taatttgagttcgattttaaacttaagttcataaagtcttccataagtgaataggattgtttcttatacttcctaccccatgctggatcaatcttaacaa |
6516347 |
T |
 |
| Q |
226 |
gcactgcaattcgtaagagaaagtatcctaaatgataatgatg |
268 |
Q |
| |
|
|||||||||||| | ||||| |||||||| ||||||||||| |
|
|
| T |
6516346 |
gcactgcaattccataaagaaaatatcctaattgataatgatg |
6516304 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 46383276 - 46383398
Alignment:
| Q |
147 |
ctcaaggtcataaaatcctcaatgagtgaataggctt-gaggcttatgctttctaccccaaattggatcaatctttggaagcactgcaattcgtaagaga |
245 |
Q |
| |
|
|||||| |||||| ||| || ||||||||||| |||| ||| ||||| ||| ||||||||||| ||||||||||| | ||||||| ||||| ||||| |
|
|
| T |
46383276 |
ctcaagttcataatatcttccatgagtgaataagctttgagacttatacttcctaccccaaataggatcaatcttggcgagcactgtaattccatagaga |
46383375 |
T |
 |
| Q |
246 |
aagtatcctaaatgataatgatg |
268 |
Q |
| |
|
| |||||||||||||||||||| |
|
|
| T |
46383376 |
gaatatcctaaatgataatgatg |
46383398 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 171 - 299
Target Start/End: Complemental strand, 3754122 - 3753994
Alignment:
| Q |
171 |
agtgaataggcttgaggcttatgctttctaccccaaattggatcaatctttggaagcactgcaattcgtaagagaaagtatcctaaatgataatgatggt |
270 |
Q |
| |
|
|||||||| ||||| || |||| |||| ||||||| |||||||||||||| ||| || ||||||| | ||||| || ||||||||||||||||| | |
|
|
| T |
3754122 |
agtgaataagcttgtggtttatacttttgtccccaaaatggatcaatctttgcaagaacagcaattccataaagaaaataacctaaatgataatgatgat |
3754023 |
T |
 |
| Q |
271 |
cgttcttaattccaaacccgaaatcaaca |
299 |
Q |
| |
|
| || | ||||||||| || ||||||||| |
|
|
| T |
3754022 |
cattataaattccaaaaccaaaatcaaca |
3753994 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 206
Target Start/End: Complemental strand, 9665602 - 9665567
Alignment:
| Q |
171 |
agtgaataggcttgaggcttatgctttctaccccaa |
206 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| |
|
|
| T |
9665602 |
agtgaataggcttgaggcttatactttctaccccaa |
9665567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 35244345 - 35244270
Alignment:
| Q |
145 |
tactcaaggtcataaaatcctcaatgagtgaataggcttgaggcttatgctttctaccccaaattggatcaatctt |
220 |
Q |
| |
|
|||||||| |||||||||| | ||||||||||||||||||| |||| ||| ||||||||| ||||||||||||| |
|
|
| T |
35244345 |
tactcaagttcataaaatctttcatgagtgaataggcttgagatttatacttcctaccccaagttggatcaatctt |
35244270 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 206
Target Start/End: Complemental strand, 13536626 - 13536591
Alignment:
| Q |
171 |
agtgaataggcttgaggcttatgctttctaccccaa |
206 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| |
|
|
| T |
13536626 |
agtgaataggcttgaggcttatactttctaccccaa |
13536591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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