View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7489_low_37 (Length: 271)
Name: NF7489_low_37
Description: NF7489
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7489_low_37 |
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Alignment Details
Target: chr1 (Bit Score: 144; Significance: 9e-76; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 23552703 - 23552532
Alignment:
| Q |
19 |
ctctgatgttttacgatcaatgtccatcggaacctgtccagattcagaaagattacttcgacgaccagattgacgaaaagaatcattaacaatcggttcc |
118 |
Q |
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| T |
23552703 |
ctctgatgttttacgataaatgtccatcggaaccggtccagattcagaaagattacttcgacgaccagattgacgaaaagaatcattaacaatcggttcc |
23552604 |
T |
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| Q |
119 |
agatcaatgtccattggaatcggacctgattcttggttccgcatagtagcttgagaaaagagagataacaaa |
190 |
Q |
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|||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||| ||| ||||| |
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| T |
23552603 |
agatcaatgtccattggaatcggacctgattcttggttcctcgtcgtagcttgagaaaagagggattacaaa |
23552532 |
T |
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