View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7490_low_4 (Length: 436)

Name: NF7490_low_4
Description: NF7490
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7490_low_4
NF7490_low_4
[»] chr8 (5 HSPs)
chr8 (16-410)||(7926884-7927278)
chr8 (22-411)||(8302308-8302697)
chr8 (22-203)||(41662822-41663003)
chr8 (23-264)||(13876878-13877118)
chr8 (22-231)||(20826805-20827014)
[»] scaffold0034 (1 HSPs)
scaffold0034 (16-410)||(103090-103484)
[»] chr7 (6 HSPs)
chr7 (26-410)||(4935375-4935759)
chr7 (22-411)||(29970479-29970868)
chr7 (22-417)||(17723140-17723535)
chr7 (104-168)||(17058105-17058169)
chr7 (65-265)||(20658463-20658663)
chr7 (67-177)||(8773394-8773504)
[»] chr3 (4 HSPs)
chr3 (24-418)||(19917471-19917865)
chr3 (123-410)||(2366815-2367102)
chr3 (62-173)||(10620147-10620258)
chr3 (119-254)||(21738319-21738454)
[»] chr4 (2 HSPs)
chr4 (26-410)||(47421313-47421697)
chr4 (179-410)||(45716483-45716714)
[»] chr5 (3 HSPs)
chr5 (16-418)||(23240880-23241282)
chr5 (23-335)||(33172164-33172476)
chr5 (22-248)||(25854848-25855074)
[»] chr6 (3 HSPs)
chr6 (22-237)||(17603755-17603969)
chr6 (22-231)||(17555600-17555809)
chr6 (146-216)||(18680081-18680151)
[»] chr2 (2 HSPs)
chr2 (71-207)||(9666456-9666592)
chr2 (67-177)||(28398030-28398140)
[»] chr1 (6 HSPs)
chr1 (71-207)||(39432840-39432976)
chr1 (33-215)||(9137748-9137930)
chr1 (71-179)||(20798186-20798294)
chr1 (110-168)||(21412851-21412909)
chr1 (62-168)||(22189271-22189377)
chr1 (146-254)||(47620478-47620586)


Alignment Details
Target: chr8 (Bit Score: 283; Significance: 1e-158; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 16 - 410
Target Start/End: Original strand, 7926884 - 7927278
Alignment:
Q  16 atcaaaataaccaggcatatcttgccagcacttcaatagacgcagcggtctcggaccccaattctcttcatccacagataacactaaaggacagtgatca 115  Q
    |||| |||| ||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| || || | |||||||||||||    
T  7926884 atcataatagccaggcatatcttgccaacacttcaacagacgcaccggtctcggaccccaattctcttcatccacagacaatacgataggacagtgatca 7926983  T
Q  116 gataatcctcttaattgtgccacctgaatgcaattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactcatcgaacgtccat 215  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  7926984 gataaacctcttaagtgtgccacctgaatgcagttaggccacaccaaacaccattcttcagagagcaagaacctatccaatctactcatcgagcgtccat 7927083  T
Q  216 cccccttataccaagtaaactttctcccacataacggtaggtcaatcaaaactctatcttcaataaaatcattaaaaggtgcacaatcatcagccacctg 315  Q
    |||||||| ||||||||||||| ||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||    
T  7927084 cccccttaaaccaagtaaacttcctcccacataaaggtaaatcaatcaaaactctatcttcaataaaatcattaaaaggtgcacaatcatccaccaactg 7927183  T
Q  316 agaacccctaaccgaacgcctttcttcgacagaccgcaccgtgttaaaatccccgcaaacacaaacctttttattccctaaagaaagcaacctcg 410  Q
    ||| || ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7927184 agaccctctaaccgaacgcctttcttcgactgaccgcacagtgttgaaatccccgcaaacacaaaccttgttattccctaaagaaagcaacctcg 7927278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 22 - 411
Target Start/End: Original strand, 8302308 - 8302697
Alignment:
Q  22 ataaccaggcatatcttgccagcacttcaatagacgcagcggtctcggaccccaattctcttcatccacagataacactaaaggacagtgatcagataat 121  Q
    ||||||||||||||||||||| || ||||  ||||||| ||||||||| ||||||||||||||||||||||| ||||| |  ||||| |||||||||||     
T  8302308 ataaccaggcatatcttgccaacatttcaggagacgcaccggtctcggcccccaattctcttcatccacagacaacacaatgggacaatgatcagataaa 8302407  T
Q  122 cctcttaattgtgccacctgaatgcaattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactcatcgaacgtccatccccct 221  Q
    |||||||| || || | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8302408 cctcttaactgagctatctgaatgcaattaggccacaccatacaccattcttcagagagcaagaacctatccaacctactcatcgaacgaccatccccct 8302507  T
Q  222 tataccaagtaaactttctcccacataacggtaggtcaatcaaaactctatcttcaataaaatcattaaaaggtgcacaatcatcagccacctgagaacc 321  Q
    |||||||||||||||| ||||||| || |||||  ||||||||||||| |||||||||||||||||||||||||||||||||| |  |||||||||||||    
T  8302508 tataccaagtaaacttcctcccacttagcggtaaatcaatcaaaactcgatcttcaataaaatcattaaaaggtgcacaatcagctaccacctgagaacc 8302607  T
Q  322 cctaaccgaacgcctttcttcgacagaccgcaccgtgttaaaatccccgcaaacacaaacctttttattccctaaagaaagcaacctcga 411  Q
    ||||||||| ||||||||||| || |||||||| ||||||||||| || |||||||| || || ||||| ||||||||||||||||||||    
T  8302608 cctaaccgaccgcctttcttcaactgaccgcacagtgttaaaatctccacaaacacacactttattattacctaaagaaagcaacctcga 8302697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 22 - 203
Target Start/End: Complemental strand, 41663003 - 41662822
Alignment:
Q  22 ataaccaggcatatcttgccagcacttcaatagacgcagcggtctcggaccccaattctcttcatccacagataacactaaaggacagtgatcagataat 121  Q
    |||| |||||||||||||||| || |||| |||||||| | ||||||| ||||||||||||||||||||||| ||||| | ||| ||||||| |||||||    
T  41663003 ataatcaggcatatcttgccaacatttcagtagacgcaccagtctcggcccccaattctcttcatccacagacaacacaatagggcagtgattagataat 41662904  T
Q  122 cctcttaattgtgccacctgaatgcaattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactca 203  Q
    |||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41662903 cctcttaactgagccacctgaatgcaattaggccataccaaacaccattcttcagagagcaagaacctatccaacctactca 41662822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 23 - 264
Target Start/End: Complemental strand, 13877118 - 13876878
Alignment:
Q  23 taaccaggcatatcttgccagcacttcaatagacgcagcggtctcggaccccaattctcttcatccacagataacactaaaggacagtgatcagataatc 122  Q
    |||||||||||||||||||| || |||||||  |||| || |||||| ||||| || || ||||| || || ||||| | |||||| ||||| || |  |    
T  13877118 taaccaggcatatcttgccaacatttcaataatcgcaacg-tctcggcccccagttttcctcatctaccgacaacacaataggacaatgatctgaaagac 13877020  T
Q  123 ctcttaattgtgccacctgaatgcaattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactcatcgaacgtccatccccctt 222  Q
    | ||||| ||  | |||||||| ||||| ||||||| ||| |||||  |||| || | ||| ||||| |||||||||||||| || || |||||||||||    
T  13877019 cccttaagtgaccaacctgaatacaatttggccacaacaagcaccacgcttcggataacaaaaacctgtccaacctactcatagatcgaccatccccctt 13876920  T
Q  223 ataccaagtaaactttctcccacataacggtaggtcaatcaa 264  Q
    | |||| ||||||||||  |||||||| ||||  ||||||||    
T  13876919 aaaccaggtaaactttcggccacataaaggtaaatcaatcaa 13876878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 20826805 - 20827014
Alignment:
Q  22 ataaccaggcatatcttgccagcacttcaatagacgcagcggtctcggaccccaattctcttcatccacagataacactaaaggacagtgatcagataat 121  Q
    |||||||||||| |||||||| || ||||  ||||||| ||| ||| | |||||||| |||||||| || || ||||| |  ||||| |||| ||| |      
T  20826805 ataaccaggcatgtcttgccaacatttcagaagacgcaacggcctcagtccccaattttcttcatctactgacaacacaatcggacaatgattagacaga 20826904  T
Q  122 cctcttaattgtgccacctgaatgcaattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactcatcgaacgtccatccccct 221  Q
    || | ||  || || ||||| || |||||||||||||||| ||||||  |||| || | ||| || ||||||||||| |||||||| || ||||||||||    
T  20826905 ccccgtagatgagcaacctgcatacaattaggccacaccagacaccaaccttctgacaacaaaaatctatccaacctgctcatcgaccgcccatccccct 20827004  T
Q  222 tataccaagt 231  Q
    || |||||||    
T  20827005 taaaccaagt 20827014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 16 - 410
Target Start/End: Complemental strand, 103484 - 103090
Alignment:
Q  16 atcaaaataaccaggcatatcttgccagcacttcaatagacgcagcggtctcggaccccaattctcttcatccacagataacactaaaggacagtgatca 115  Q
    |||| |||| ||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| || |||| ||||||||| |||    
T  103484 atcataatagccaggcatatcttgccaacacttcaacagacgcaccggtctcggaccccaattctcttcatccacagacaatactataggacagtggtca 103385  T
Q  116 gataatcctcttaattgtgccacctgaatgcaattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactcatcgaacgtccat 215  Q
    ||||| |||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  103384 gataaacctcttaagtgtgccacctgaatgcagttgggccacaccaaacaccattcttcagagagcaagaacctatccaatctactcatcgagcgtccat 103285  T
Q  216 cccccttataccaagtaaactttctcccacataacggtaggtcaatcaaaactctatcttcaataaaatcattaaaaggtgcacaatcatcagccacctg 315  Q
    |||||||| ||||||||||||| ||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||    
T  103284 cccccttaaaccaagtaaacttcctcccacataatggtaaatcaatcaaaactctatcttcaataaaatcattaaaaggtgcacaatcatccaccaactg 103185  T
Q  316 agaacccctaaccgaacgcctttcttcgacagaccgcaccgtgttaaaatccccgcaaacacaaacctttttattccctaaagaaagcaacctcg 410  Q
    ||| || ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  103184 agatcctctaaccgaacgcctttcttcgactgaccgcacagtgttgaaatccccgcaaacacaaaccttgttattccctaaagaaagcaacctcg 103090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 265; Significance: 1e-148; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 26 - 410
Target Start/End: Complemental strand, 4935759 - 4935375
Alignment:
Q  26 ccaggcatatcttgccagcacttcaatagacgcagcggtctcggaccccaattctcttcatccacagataacactaaaggacagtgatcagataatcctc 125  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||||| || |||| |||||||||||||||||| ||||    
T  4935759 ccaggcatatcttgccaacacttcaacagacgcaccggtctcggaccccaattctcttcatctacagacaaaactataggacagtgatcagataaacctc 4935660  T
Q  126 ttaattgtgccacctgaatgcaattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactcatcgaacgtccatcccccttata 225  Q
     ||| ||||||||||||||||| || |||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||| |    
T  4935659 gtaaatgtgccacctgaatgcagttcggccacaccagacaccattcttcagaaagcaagaacctatccaatctactcatcgaacgaccatcccccttaaa 4935560  T
Q  226 ccaagtaaactttctcccacataacggtaggtcaatcaaaactctatcttcaataaaatcattaaaaggtgcacaatcatcagccacctgagaaccccta 325  Q
    |||||||||||| ||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||| |||    
T  4935559 ccaagtaaacttcctcccacataaaggtaaatcaatcaaaactctatcttcaataaaatcattaaaaggtgcacaatcatccaccaactgagaacctcta 4935460  T
Q  326 accgaacgcctttcttcgacagaccgcaccgtgttaaaatccccgcaaacacaaacctttttattccctaaagaaagcaacctcg 410  Q
    |||||||||||||||||||| |||||||| ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||    
T  4935459 accgaacgcctttcttcgactgaccgcacagtgttgaaatccccacaaacacaaaccttgttattccctaaagaaagcaacctcg 4935375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 22 - 411
Target Start/End: Original strand, 29970479 - 29970868
Alignment:
Q  22 ataaccaggcatatcttgccagcacttcaatagacgcagcggtctcggaccccaattctcttcatccacagataacactaaaggacagtgatcagataat 121  Q
    |||||| |||||||||||||| || ||||  ||||||| ||||||||| ||||||||||| ||||||||||| ||||| |  ||||| |||||||||||     
T  29970479 ataacctggcatatcttgccaacatttcaggagacgcaccggtctcggcccccaattctcctcatccacagacaacacaatgggacaatgatcagataaa 29970578  T
Q  122 cctcttaattgtgccacctgaatgcaattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactcatcgaacgtccatccccct 221  Q
    |||||||| || || ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  29970579 cctcttaactgagctacctgaatgcaattaggccacaccatacaccattcttcagaaagcaagaacctatccaacctactcatcaaacgaccatccccct 29970678  T
Q  222 tataccaagtaaactttctcccacataacggtaggtcaatcaaaactctatcttcaataaaatcattaaaaggtgcacaatcatcagccacctgagaacc 321  Q
    |||||||||||||||| ||||||| || |||||  ||||||||||||| |||||||||||||||||||||||||||||||||| |  |||||||||||||    
T  29970679 tataccaagtaaacttcctcccacttagcggtaaatcaatcaaaactcgatcttcaataaaatcattaaaaggtgcacaatcagctaccacctgagaacc 29970778  T
Q  322 cctaaccgaacgcctttcttcgacagaccgcaccgtgttaaaatccccgcaaacacaaacctttttattccctaaagaaagcaacctcga 411  Q
    |||||| || ||||||||||| || |||||||| ||||||||||| || |||||||||||||| ||||| ||||||||||||||||||||    
T  29970779 cctaactgaccgcctttcttcaactgaccgcacagtgttaaaatctccacaaacacaaaccttattattacctaaagaaagcaacctcga 29970868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 22 - 417
Target Start/End: Original strand, 17723140 - 17723535
Alignment:
Q  22 ataaccaggcatatcttgccagcacttcaatagacgcagcggtctcggaccccaattctcttcatccacagataacactaaaggacagtgatcagataat 121  Q
    ||||||||||||||||||||| || ||||| ||||||| ||| | |||||||||||||| |||||||||||  || || | ||| || ||||||||||||    
T  17723140 ataaccaggcatatcttgccaacatttcaaaagacgcaccggccgcggaccccaattcttttcatccacagtcaagacaatagggcaatgatcagataat 17723239  T
Q  122 cctcttaattgtgccacctgaatgcaattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactcatcgaacgtccatccccct 221  Q
    |||||||| || || |||||||  ||| ||||||||||||  |||||||||||||| ||||||||||| |||||  ||||||||||||| |||||||| |    
T  17723240 cctcttaactgagcaacctgaagacaagtaggccacaccatgcaccattcttcagatagcaagaacctgtccaatgtactcatcgaacggccatccccat 17723339  T
Q  222 tataccaagtaaactttctcccacataacggtaggtcaatcaaaactctatcttcaataaaatcattaaaaggtgcacaatcatcagccacctgagaacc 321  Q
    |||||||||||||||| ||||||||||||||||  | ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17723340 tataccaagtaaacttcctcccacataacggtaaattaattaaaactctatcttcaataaaatcattaaaaggtgcacaatcatcaaccacctgagaacc 17723439  T
Q  322 cctaaccgaacgcctttcttcgacagaccgcaccgtgttaaaatccccgcaaacacaaacctttttattccctaaagaaagcaacctcgatgaaag 417  Q
    |||||| || |||||||| || || |||||||| || ||||||||||| || |||||||||||  || | |||||||||||||||||||| |||||    
T  17723440 cctaacagagcgcctttcatcaactgaccgcacagtattaaaatccccacacacacaaaccttactactacctaaagaaagcaacctcgaagaaag 17723535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 17058105 - 17058169
Alignment:
Q  104 ggacagtgatcagataatcctcttaattgtgccacctgaatgcaattaggccacaccaaacacca 168  Q
    ||||| ||||||||||||||||  ||||||||||||||||| ||||| ||||||||||| |||||    
T  17058105 ggacaatgatcagataatcctcgcaattgtgccacctgaatacaattcggccacaccaagcacca 17058169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 265
Target Start/End: Original strand, 20658463 - 20658663
Alignment:
Q  65 ctcggaccccaattctcttcatccacagataacactaaaggacagtgatcagataatcctcttaattgtgccacctgaatgcaattaggccacaccaaac 164  Q
    ||||| ||||||||||| | ||| |||||||| |  || ||||| ||||| || || ||||| | ||| || |||||||||||||| ||||| || ||||    
T  20658463 ctcggcccccaattctccttatcaacagataaaatcaacggacaatgatctgacaaacctctaagttgcgcaacctgaatgcaattgggccaaactaaac 20658562  T
Q  165 accattcttcagagagcaagaacctatccaacctactcatcgaacgtccatcccccttataccaagtaaactttctcccacataacggtaggtcaatcaa 264  Q
    |||| ||||  || |  || |||| ||| |  ||||||||||| | ||| ||||| ||  |||||||||| || |||||||| |||||||| ||||||||    
T  20658563 accactctttcgaaataaaaaaccgatcaattctactcatcgatcttccgtcccctttgaaccaagtaaaattactcccacacaacggtagatcaatcaa 20658662  T
Q  265 a 265  Q
    |    
T  20658663 a 20658663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 8773394 - 8773504
Alignment:
Q  67 cggaccccaattctcttcatccacagataacactaaaggacagtgatcagataatcctcttaattgtgccacctgaatgcaattaggccacaccaaacac 166  Q
    |||||||||||| ||||||||||| || |  |  ||||||||||| | |||||| |||| ||| || || || ||||| ||||| |||||||| || |||    
T  8773394 cggaccccaattttcttcatccaccgacagaatcaaaggacagtggttagataaacctcgtaaatgagcgacttgaatacaattcggccacactaagcac 8773493  T
Q  167 cattcttcaga 177  Q
    || ||||||||    
T  8773494 caatcttcaga 8773504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 251; Significance: 1e-139; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 24 - 418
Target Start/End: Complemental strand, 19917865 - 19917471
Alignment:
Q  24 aaccaggcatatcttgccagcacttcaatagacgcagcggtctcggaccccaattctcttcatccacagataacactaaaggacagtgatcagataatcc 123  Q
    |||| |||||||||||| | |||||||| ||||||| ||||||||||||||| ||||||||||||||||| || |||| |||||| ||||||||||| ||    
T  19917865 aacccggcatatcttgctaacacttcaacagacgcaccggtctcggaccccagttctcttcatccacagacaatactataggacaatgatcagataagcc 19917766  T
Q  124 tcttaattgtgccacctgaatgcaattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactcatcgaacgtccatccccctta 223  Q
    |||||| |||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  19917765 tcttaagtgtgccacctgaacacaattaggccacaccaaacaccaatcttcagagagcaagaacctatccaacctactcatcgaacggccattcccctta 19917666  T
Q  224 taccaagtaaactttctcccacataacggtaggtcaatcaaaactctatcttcaataaaatcattaaaaggtgcacaatcatcagccacctgagaacccc 323  Q
     ||||||||||||| ||||||||||||||||  ||||||||  |||||||||||||||| |||||||||||||||||||| ||  ||| |||||||||||    
T  19917665 aaccaagtaaacttcctcccacataacggtaaatcaatcaagcctctatcttcaataaagtcattaaaaggtgcacaatcctctaccaactgagaacccc 19917566  T
Q  324 taaccgaacgcctttcttcgacagaccgcaccgtgttaaaatccccgcaaacacaaacctttttattccctaaagaaagcaacctcgatgaaagt 418  Q
    ||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||| |||||||||||||| || |||||||| ||||||    
T  19917565 taaccgaacgcctttcttcaacagaccgcacagtgttgaaatccccacaaacacaaaccttgttattccctaaagagagtaacctcgaagaaagt 19917471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 123 - 410
Target Start/End: Original strand, 2366815 - 2367102
Alignment:
Q  123 ctcttaattgtgccacctgaatgcaattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactcatcgaacgtccatccccctt 222  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  2366815 ctcttaagtgtgccacctgaatgcagttaggccacaccaaacaccattcttcagagagcaagaacctatccaatctactcatcgagcgtccatccccctt 2366914  T
Q  223 ataccaagtaaactttctcccacataacggtaggtcaatcaaaactctatcttcaataaaatcattaaaaggtgcacaatcatcagccacctgagaaccc 322  Q
    | ||||||||||||| ||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||     
T  2366915 aaaccaagtaaacttcctcccacataatggtaaatcaatcaaaactctatcttcaataaaatcattaaaaggtgcacaatcatccaccaactgagaacct 2367014  T
Q  323 ctaaccgaacgcctttcttcgacagaccgcaccgtgttaaaatccccgcaaacacaaacctttttattccctaaagaaagcaacctcg 410  Q
    ||||||||||||||||||||||| |||||||| ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||    
T  2367015 ctaaccgaacgcctttcttcgactgaccgcacagtgttgaaatccccacaaacacaaaccttgttattccctaaagaaagcaacctcg 2367102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 173
Target Start/End: Complemental strand, 10620258 - 10620147
Alignment:
Q  62 ggtctcggaccccaattctcttcatccacagataacactaaaggacagtgatcagataatcctcttaattgtgccacctgaatgcaattaggccacacca 161  Q
    ||||||||||||||||| || ||||||||||| || || |||||| | |||||  |||||||||| || || || |  || | |||||||||||||| ||    
T  10620258 ggtctcggaccccaattttcctcatccacagacaaaaccaaaggataatgatccaataatcctctcaactgcgcaatttgtaagcaattaggccacaaca 10620159  T
Q  162 aacaccattctt 173  Q
    ||||||| ||||    
T  10620158 aacaccactctt 10620147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 254
Target Start/End: Complemental strand, 21738454 - 21738319
Alignment:
Q  119 aatcctcttaattgtgccacctgaatgcaattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactcatcgaacgtccatccc 218  Q
    ||||||||||| || ||||||||||   |||||||||||  ||||| |||||| || || | ||| ||||  || |||| ||||||||| |  |||||||    
T  21738454 aatcctcttaactgagccacctgaagaaaattaggccacctcaaaccccattcctccgaaatcaaaaaccggtctaaccgactcatcgacctaccatccc 21738355  T
Q  219 ccttataccaagtaaactttctcccacataacggta 254  Q
    | ||  |||||||||| ||||  |||||||||||||    
T  21738354 ctttgaaccaagtaaattttcggccacataacggta 21738319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 249; Significance: 1e-138; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 26 - 410
Target Start/End: Original strand, 47421313 - 47421697
Alignment:
Q  26 ccaggcatatcttgccagcacttcaatagacgcagcggtctcggaccccaattctcttcatccacagataacactaaaggacagtgatcagataatcctc 125  Q
    ||||||||||| ||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||| ||||    
T  47421313 ccaggcatatcgtgccaacacttcaacagacgcaccggtctcggaccccaattctcttcatccacagacaaaactataggacagtgatcagataaacctc 47421412  T
Q  126 ttaattgtgccacctgaatgcaattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactcatcgaacgtccatcccccttata 225  Q
     ||| ||||||||||||||||| || |||||||||| ||||||||||||||| ||||||||||| ||||| |||||||||||||| |||||||||||| |    
T  47421413 gtaaatgtgccacctgaatgcagttcggccacaccatacaccattcttcagaaagcaagaacctgtccaatctactcatcgaacgaccatcccccttaaa 47421512  T
Q  226 ccaagtaaactttctcccacataacggtaggtcaatcaaaactctatcttcaataaaatcattaaaaggtgcacaatcatcagccacctgagaaccccta 325  Q
    |||||||||||| ||||||||||| ||||  ||||||||||| ||||||||||||||||||| ||| ||||||||||||||  ||| ||||||||| |||    
T  47421513 ccaagtaaacttcctcccacataaaggtaaatcaatcaaaaccctatcttcaataaaatcatgaaagggtgcacaatcatccaccaactgagaacctcta 47421612  T
Q  326 accgaacgcctttcttcgacagaccgcaccgtgttaaaatccccgcaaacacaaacctttttattccctaaagaaagcaacctcg 410  Q
    |||||||||||||||||||| |||||||| ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||    
T  47421613 accgaacgcctttcttcgactgaccgcacagtgttgaaatccccacaaacacaaaccttgttattccctaaagaaagcaacctcg 47421697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 179 - 410
Target Start/End: Original strand, 45716483 - 45716714
Alignment:
Q  179 agcaagaacctatccaacctactcatcgaacgtccatcccccttataccaagtaaactttctcccacataacggtaggtcaatcaaaactctatcttcaa 278  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| ||||||||||| ||||  ||||||||||||||||||||||    
T  45716483 agcaagaacctatccaatctactcatcgagcgtccatcccccttaaaccaagtaaacttcctcccacataaaggtaaatcaatcaaaactctatcttcaa 45716582  T
Q  279 taaaatcattaaaaggtgcacaatcatcagccacctgagaacccctaaccgaacgcctttcttcgacagaccgcaccgtgttaaaatccccgcaaacaca 378  Q
    ||||||||||||||||||||||||||||  ||| ||||||||| ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  45716583 taaaatcattaaaaggtgcacaatcatccaccaactgagaacctctaaccgaacgcctttcttcgactgaccgcacagtgttgaaatccccgcaaacaca 45716682  T
Q  379 aacctttttattccctaaagaaagcaacctcg 410  Q
    |||||| |||||||||||||||||||||||||    
T  45716683 aaccttgttattccctaaagaaagcaacctcg 45716714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 16 - 418
Target Start/End: Original strand, 23240880 - 23241282
Alignment:
Q  16 atcaaaataaccaggcatatcttgccagcacttcaatagacgcagcggtctcggaccccaattctcttcatccacagataacactaaaggacagtgatca 115  Q
    ||||| |||||| |||||||||||||| || ||||  ||||||| ||||||||| ||||||||||||||||||||||| ||||  |  ||||| ||||||    
T  23240880 atcaatataacctggcatatcttgccaacatttcagaagacgcaccggtctcggcccccaattctcttcatccacagacaacaaaatgggacaatgatca 23240979  T
Q  116 gataatcctcttaattgtgccacctgaatgcaattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactcatcgaacgtccat 215  Q
    |||||||||||||| || || ||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||| |||||||| || ||||    
T  23240980 gataatcctcttaactgagctacctgaatgcaattaggccacaccatacaccattctacagaaagcaagaacctatccaacctcctcatcgagcgaccat 23241079  T
Q  216 cccccttataccaagtaaactttctcccacataacggtaggtcaatcaaaactctatcttcaataaaatcattaaaaggtgcacaatcatcagccacctg 315  Q
    |||||||| ||||||||||||| ||||||| |||| |||  ||||||||||||| ||||||||||||||||||||||||||  ||||||||  |||||||    
T  23241080 cccccttaaaccaagtaaacttcctcccacttaacagtaaatcaatcaaaactcgatcttcaataaaatcattaaaaggtgtgcaatcatctaccacctg 23241179  T
Q  316 agaacccctaaccgaacgcctttcttcgacagaccgcaccgtgttaaaatccccgcaaacacaaacctttttattccctaaagaaagcaacctcgatgaa 415  Q
     |||||||||||||||||||||||||| || |||||||| ||||||||||| || |||||||||||||| ||||| | |||||||||||||||||| |||    
T  23241180 ggaacccctaaccgaacgcctttcttcaactgaccgcacagtgttaaaatctccacaaacacaaaccttattattacataaagaaagcaacctcgacgaa 23241279  T
Q  416 agt 418  Q
    |||    
T  23241280 agt 23241282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 23 - 335
Target Start/End: Original strand, 33172164 - 33172476
Alignment:
Q  23 taaccaggcatatcttgccagcacttcaatagacgcagcggtctcggaccccaattctcttcatccacagataacactaaaggacagtgatcagataatc 122  Q
    ||||||||||| || ||| |||| ||||| |  ||||  |||||||| |||||||| | |||||| || || || |  | |||||| ||||| || |  |    
T  33172164 taaccaggcatgtcctgctagcatttcaacaaccgcaaaggtctcggcccccaattttgttcatcaactgacaataaaataggacaatgatccgagagcc 33172263  T
Q  123 ctcttaattgtgccacctgaatgcaattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactcatcgaacgtccatccccctt 222  Q
    | ||||| || || |||||||| ||||||||||| | |  |||||| |||||||||||||| ||||| ||||| | |||||||||||| ||||| || ||    
T  33172264 cccttaactgagctacctgaatacaattaggccataactgacaccactcttcagagagcaaaaacctgtccaaacgactcatcgaacgcccatctccttt 33172363  T
Q  223 ataccaagtaaactttctcccacataacggtaggtcaatcaaaactctatcttcaataaaatcattaaaaggtgcacaatcatcagccacctgagaaccc 322  Q
     ||||| || |||||||  ||||  |  ||||  ||||  ||||| |  || ||||||||||||||||| |||||| ||||||| || |||||||| ||     
T  33172364 gtaccacgtgaactttcgaccacccagaggtaaatcaactaaaacacactcatcaataaaatcattaaacggtgcataatcatctgcaacctgagaccct 33172463  T
Q  323 ctaaccgaacgcc 335  Q
    | |||||||||||    
T  33172464 cgaaccgaacgcc 33172476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 248
Target Start/End: Complemental strand, 25855074 - 25854848
Alignment:
Q  22 ataaccaggcatatcttgccagcacttcaatagacgcagcggtctcggaccccaattctcttcatccacagataacactaaaggacagtgatcagataat 121  Q
    |||||||||||| |||||||| || ||||  ||||||| ||| ||||| |||||||| |||||||| || || ||||| |   |||| |||||||| |      
T  25855074 ataaccaggcatgtcttgccaacatttcagaagacgcaacggcctcggtccccaattttcttcatctactgacaacacgacctgacaatgatcagacaga 25854975  T
Q  122 cctcttaattgtgccacctgaatgcaattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactcatcgaacgtccatccccct 221  Q
    || |  |  || || ||||| || |||||||||||||||| ||||||  |||| || | |||||| ||||||||||| |||||| | || ||||||||||    
T  25854974 ccccgaagatgagcaacctgcatacaattaggccacaccagacaccaaccttctgacaacaagaatctatccaacctgctcatcaaccgcccatccccct 25854875  T
Q  222 tataccaagtaaactttctcccacata 248  Q
    || ||||||| || || | ||||||||    
T  25854874 taaaccaagtgaatttccgcccacata 25854848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 5e-23; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 22 - 237
Target Start/End: Complemental strand, 17603969 - 17603755
Alignment:
Q  22 ataaccaggcatatcttgccagcacttcaatagacgcagcggtctcggaccccaattctcttcatccacagataacactaaaggacagtgatcagataat 121  Q
    |||||||||||| ||||||||||| ||||  ||||||| ||| ||||  ||| |||| |||||||| || || ||||| |  ||||| |||||||| |      
T  17603969 ataaccaggcatgtcttgccagcatttcagaagacgcaacggcctcgt-ccctaattttcttcatctactgacaacacaatcggacaatgatcagacaga 17603871  T
Q  122 cctcttaattgtgccacctgaatgcaattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactcatcgaacgtccatccccct 221  Q
     | ||||| || || ||||| || | ||||||||||| || ||||||  |||| || | ||  |||||||||||||||||||||||||| ||||||||||    
T  17603870 acccttaaatgagcaacctgcatactattaggccacaacagacaccaaccttctgacaacacaaacctatccaacctactcatcgaacgcccatccccct 17603771  T
Q  222 tataccaagtaaactt 237  Q
    || |||||||||||||    
T  17603770 taaaccaagtaaactt 17603755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 17555809 - 17555600
Alignment:
Q  22 ataaccaggcatatcttgccagcacttcaatagacgcagcggtctcggaccccaattctcttcatccacagataacactaaaggacagtgatcagataat 121  Q
    |||||||||||| |||||||| || ||||  ||||||| ||| ||||| |||||||| |||||||| || || ||||| |  ||||| |||||||| |      
T  17555809 ataaccaggcatgtcttgccaacatttcagaagacgcaacggcctcggtccccaattttcttcatctactgacaacacaaccggacaatgatcagacaga 17555710  T
Q  122 cctcttaattgtgccacctgaatgcaattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactcatcgaacgtccatccccct 221  Q
    || | ||  || || ||||| || |||||||||||||||| ||||||  |||| || | |||||| ||||||||||| |||||||| |  ||||||||||    
T  17555709 ccccgtagatgagcaacctgcatacaattaggccacaccagacaccaaccttctgacaacaagaatctatccaacctgctcatcgaccacccatccccct 17555610  T
Q  222 tataccaagt 231  Q
    || |||||||    
T  17555609 taaaccaagt 17555600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 18680151 - 18680081
Alignment:
Q  146 caattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactcatcgaacgtccatc 216  Q
    ||||||||||| | |||||||||||||| ||||||||| ||||| |||| ||||||||| ||||| |||||    
T  18680151 caattaggccataacaaacaccattcttaagagagcaaaaacctgtccagcctactcattgaacgcccatc 18680081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 71 - 207
Target Start/End: Complemental strand, 9666592 - 9666456
Alignment:
Q  71 ccccaattctcttcatccacagataacactaaaggacagtgatcagataatcctcttaattgtgccacctgaatgcaattaggccacaccaaacaccatt 170  Q
    |||||||| || ||||||||||| | ||| || ||||| ||||| || || |||||||| || ||||||||||||||||||||||||  ||||| |||||    
T  9666592 ccccaattttcctcatccacagacagcaccaacggacaatgatccgacaaacctcttaactgagccacctgaatgcaattaggccacttcaaaccccatt 9666493  T
Q  171 cttcagagagcaagaacctatccaacctactcatcga 207  Q
    | ||||||| ||| ||||  ||||| | |||||||||    
T  9666492 cctcagagatcaaaaaccggtccaaacgactcatcga 9666456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 177
Target Start/End: Complemental strand, 28398140 - 28398030
Alignment:
Q  67 cggaccccaattctcttcatccacagataacactaaaggacagtgatcagataatcctcttaattgtgccacctgaatgcaattaggccacaccaaacac 166  Q
    |||||||||||| ||||||||||| || |  |  ||||||||||| |||||||| ||||  || || || || ||||| ||||| |||||||| || |||    
T  28398140 cggaccccaattttcttcatccaccgacagaatcaaaggacagtggtcagataaacctcgcaaatgagcgacttgaatacaatttggccacactaagcac 28398041  T
Q  167 cattcttcaga 177  Q
    || ||||||||    
T  28398040 cagtcttcaga 28398030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 207
Target Start/End: Original strand, 39432840 - 39432976
Alignment:
Q  71 ccccaattctcttcatccacagataacactaaaggacagtgatcagataatcctcttaattgtgccacctgaatgcaattaggccacaccaaacaccatt 170  Q
    |||||||| || ||||||||||| | ||| || ||||| ||||| || || |||||||| || ||||||||||||||||||||||||  ||||| | |||    
T  39432840 ccccaattttcctcatccacagacagcaccaacggacaatgatccgacaaacctcttaactgagccacctgaatgcaattaggccacttcaaaccctatt 39432939  T
Q  171 cttcagagagcaagaacctatccaacctactcatcga 207  Q
    | ||||||| ||| ||||  ||||| | |||||||||    
T  39432940 cctcagagatcaaaaaccggtccaaacgactcatcga 39432976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 215
Target Start/End: Original strand, 9137748 - 9137930
Alignment:
Q  33 tatcttgccagcacttcaatagacgcagcggtctcggaccccaattctcttcatccacagataacactaaaggacagtgatcagataatcctcttaattg 132  Q
    |||||||||| || ||||| |||||||  || | ||| ||||||||||| | ||| ||||| ||| | | |||||| ||||||||||| || ||||| ||    
T  9137748 tatcttgccaacatttcaagagacgcacaggacgcggcccccaattctcattatcaacagacaactcgataggacaatgatcagataaaccccttaaatg 9137847  T
Q  133 tgccacctgaatgcaattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactcatcgaacgtccat 215  Q
     ||  ||||||  ||||| ||||||| || |||||||||| | || ||||  ||||| ||||| |||||||||||||| ||||    
T  9137848 agcagcctgaacacaatttggccacaacagacaccattctcctgaaagcagaaacctgtccaatctactcatcgaacgaccat 9137930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 179
Target Start/End: Original strand, 20798186 - 20798294
Alignment:
Q  71 ccccaattctcttcatccacagataacactaaaggacagtgatcagataatcctcttaattgtgccacctgaatgcaattaggccacaccaaacaccatt 170  Q
    |||||||| || ||||||| ||| | ||| || ||||| ||||| || || |||||||| || ||||||||||||||||||||||||  ||||| |||||    
T  20798186 ccccaattttcctcatccaaagacagcaccaacggacaatgatccgacaaacctcttaactgagccacctgaatgcaattaggccacttcaaaccccatt 20798285  T
Q  171 cttcagaga 179  Q
    | |||||||    
T  20798286 cctcagaga 20798294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 21412851 - 21412909
Alignment:
Q  110 tgatcagataatcctcttaattgtgccacctgaatgcaattaggccacaccaaacacca 168  Q
    |||||| |||||||||| ||||||||||||||||| ||||| ||||||||||| |||||    
T  21412851 tgatcatataatcctctcaattgtgccacctgaatacaattcggccacaccaagcacca 21412909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 22189377 - 22189271
Alignment:
Q  62 ggtctcggaccccaattctcttcatccacagataacactaaaggacagtgatcagataatcctcttaattgtgccacctgaatgcaattaggccacacca 161  Q
    ||||| ||||||||||| || ||||| || || || |  || ||||| ||||||||||||||||  ||||| ||||||||||| ||||| ||||||||||    
T  22189377 ggtcttggaccccaattttcctcatcaactgacaaaagcaagggacaatgatcagataatcctcgcaattgagccacctgaatacaattcggccacacca 22189278  T
Q  162 aacacca 168  Q
    | |||||    
T  22189277 agcacca 22189271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 254
Target Start/End: Complemental strand, 47620586 - 47620478
Alignment:
Q  146 caattaggccacaccaaacaccattcttcagagagcaagaacctatccaacctactcatcgaacgtccatcccccttataccaagtaaactttctcccac 245  Q
    ||||| ||||||| || |||||||||| | || ||||| ||  | ||||| |||||||||||||| |||| ||||||  ||||||| ||||| |  ||||    
T  47620586 caatttggccacaacagacaccattctcccgaaagcaaaaatttgtccaatctactcatcgaacgaccattccccttgaaccaagtgaacttccgaccac 47620487  T
Q  246 ataacggta 254  Q
    | |||||||    
T  47620486 acaacggta 47620478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University