View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7492_high_10 (Length: 299)
Name: NF7492_high_10
Description: NF7492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7492_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 160; Significance: 3e-85; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 107 - 288
Target Start/End: Original strand, 23387852 - 23388030
Alignment:
| Q |
107 |
gcatcaaagcaaatgacacctcattttgcatcgtgcacaaatatttaacatgcattggtaaaataattttgtatatctttttcatcattatatcaataag |
206 |
Q |
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|||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23387852 |
gcatcaaagcaaatgaaaccttattttgcatcgtgcacaaatatttaacatgcattggtaaaataattttgtatatctttttcatcattatatcaataag |
23387951 |
T |
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| Q |
207 |
tcattttatattgtattatttctctaattagaaaccataagatatgattctgattattattatggttagtcacgcatttctt |
288 |
Q |
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| T |
23387952 |
tcattttatattgtattatttctctaattagaaaccataagatatgattctg---attattatggttagtcacgcatttctt |
23388030 |
T |
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