View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7492_high_15 (Length: 250)
Name: NF7492_high_15
Description: NF7492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7492_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 39022132 - 39021891
Alignment:
| Q |
1 |
ctcctcattctcattccaactcatcgttgggcccacattcacgtgaatcttcttccaccagatactctgcctcacgtaagagcagtcaagcttcccataa |
100 |
Q |
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| T |
39022132 |
ctcctcattctcattccaactcatcgttgggcccacattcacgtgaatcttcttccaccagatactctgcctcacgtaagagcagtcaagcttcccataa |
39022033 |
T |
|
| Q |
101 |
taacaggaaaggtaattggcgtccttggaaggatcagttcaatgccattgaagaagaagggcttctnnnnnnnnnnnnnnnnncagatcgtggattccct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
39022032 |
taacaggaaaggtaattggcgtccttggaaggatcagttcaatgccattgaagaagaagggcttcttgatgatgatgatgatgcagatcgtggattccct |
39021933 |
T |
|
| Q |
201 |
aggagatgctattttcctgcttttgttgtttgtttctttgtt |
242 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||| |
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| T |
39021932 |
aggagatgttattttcctgcttttgttgtttgtttctttgtt |
39021891 |
T |
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