View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7492_low_8 (Length: 545)

Name: NF7492_low_8
Description: NF7492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7492_low_8
NF7492_low_8
[»] chr1 (47 HSPs)
chr1 (4-530)||(4552996-4553527)
chr1 (318-530)||(49917958-49918169)
chr1 (318-507)||(11348110-11348298)
chr1 (329-522)||(37033643-37033836)
chr1 (287-530)||(44454737-44454979)
chr1 (287-530)||(31658816-31659058)
chr1 (329-530)||(10924843-10925043)
chr1 (315-522)||(3156473-3156678)
chr1 (318-507)||(37879480-37879668)
chr1 (380-530)||(28220574-28220725)
chr1 (341-530)||(1833153-1833342)
chr1 (332-529)||(193016-193213)
chr1 (396-528)||(16455332-16455464)
chr1 (380-530)||(28223769-28223920)
chr1 (396-521)||(37070157-37070283)
chr1 (381-530)||(13598781-13598931)
chr1 (396-530)||(3282088-3282222)
chr1 (329-523)||(3206605-3206801)
chr1 (329-509)||(3188970-3189151)
chr1 (329-509)||(3197787-3197968)
chr1 (287-413)||(30476892-30477017)
chr1 (329-528)||(13604138-13604336)
chr1 (335-531)||(22819810-22820005)
chr1 (394-523)||(20762355-20762486)
chr1 (383-528)||(26644469-26644611)
chr1 (373-530)||(29652194-29652354)
chr1 (303-362)||(15819937-15819996)
chr1 (329-452)||(13659726-13659855)
chr1 (422-507)||(29135762-29135847)
chr1 (421-530)||(30476796-30476905)
chr1 (304-381)||(46064533-46064610)
chr1 (421-510)||(46064629-46064718)
chr1 (419-530)||(21536175-21536286)
chr1 (421-528)||(13547657-13547763)
chr1 (421-528)||(13549568-13549674)
chr1 (329-435)||(19360955-19361060)
chr1 (329-435)||(19365811-19365916)
chr1 (351-433)||(51765055-51765136)
chr1 (400-473)||(16124245-16124319)
chr1 (4-38)||(27642674-27642708)
chr1 (4-38)||(29188725-29188759)
chr1 (4-38)||(52369686-52369720)
chr1 (5-38)||(3560328-3560361)
chr1 (397-433)||(9986895-9986931)
chr1 (451-530)||(13316665-13316745)
chr1 (451-507)||(15820048-15820104)
chr1 (329-413)||(24202294-24202377)
[»] chr8 (43 HSPs)
chr8 (289-530)||(4743541-4743783)
chr8 (341-530)||(30142973-30143162)
chr8 (351-530)||(43036064-43036243)
chr8 (329-521)||(42435566-42435758)
chr8 (328-531)||(4731277-4731479)
chr8 (330-530)||(1345717-1345918)
chr8 (328-507)||(4733444-4733622)
chr8 (351-507)||(40221188-40221343)
chr8 (373-523)||(15212448-15212599)
chr8 (382-507)||(27810970-27811095)
chr8 (329-530)||(10014778-10014979)
chr8 (377-523)||(22975983-22976129)
chr8 (329-530)||(12702986-12703187)
chr8 (373-507)||(11383451-11383585)
chr8 (373-530)||(5702037-5702196)
chr8 (394-530)||(1746565-1746703)
chr8 (394-530)||(31217940-31218078)
chr8 (397-523)||(34254682-34254810)
chr8 (394-523)||(34256858-34256989)
chr8 (394-507)||(19945710-19945824)
chr8 (444-530)||(33351884-33351970)
chr8 (394-507)||(42497898-42498012)
chr8 (421-522)||(4283039-4283140)
chr8 (396-519)||(19175314-19175437)
chr8 (328-427)||(33351789-33351888)
chr8 (422-512)||(3051519-3051610)
chr8 (397-472)||(10929492-10929567)
chr8 (437-507)||(4696251-4696321)
chr8 (329-435)||(7412804-7412909)
chr8 (351-435)||(1261479-1261562)
chr8 (329-433)||(2627361-2627464)
chr8 (447-530)||(23799209-23799292)
chr8 (4-38)||(6942478-6942512)
chr8 (4-38)||(38344138-38344172)
chr8 (4-38)||(43283913-43283947)
chr8 (4-38)||(44673595-44673629)
chr8 (5-38)||(7813501-7813534)
chr8 (5-38)||(13647404-13647437)
chr8 (5-38)||(13747829-13747862)
chr8 (223-256)||(17121170-17121203)
chr8 (5-38)||(24458406-24458439)
chr8 (5-38)||(43656126-43656159)
chr8 (451-530)||(17982394-17982474)
[»] scaffold0066 (1 HSPs)
scaffold0066 (299-531)||(20762-20994)
[»] chr2 (40 HSPs)
chr2 (304-530)||(36318357-36318584)
chr2 (315-530)||(2837192-2837413)
chr2 (329-530)||(34389232-34389432)
chr2 (396-530)||(20522603-20522737)
chr2 (405-531)||(14698600-14698726)
chr2 (329-506)||(36988447-36988624)
chr2 (329-522)||(23077987-23078179)
chr2 (373-528)||(33528182-33528338)
chr2 (396-530)||(21630326-21630460)
chr2 (351-528)||(28258715-28258891)
chr2 (396-518)||(39483269-39483392)
chr2 (329-441)||(29867499-29867610)
chr2 (329-473)||(39284516-39284660)
chr2 (388-530)||(45099432-45099576)
chr2 (396-530)||(10706834-10706968)
chr2 (396-530)||(33118516-33118650)
chr2 (287-434)||(17863771-17863916)
chr2 (320-370)||(28446416-28446466)
chr2 (319-529)||(35447451-35447659)
chr2 (287-407)||(17057725-17057846)
chr2 (287-407)||(17085708-17085829)
chr2 (387-473)||(6595399-6595486)
chr2 (399-531)||(8389732-8389866)
chr2 (332-434)||(45726429-45726530)
chr2 (421-523)||(5723608-5723712)
chr2 (396-499)||(17865589-17865693)
chr2 (351-435)||(30832986-30833069)
chr2 (329-435)||(25410118-25410223)
chr2 (451-523)||(2334771-2334844)
chr2 (397-498)||(40015319-40015420)
chr2 (332-363)||(15903468-15903499)
chr2 (380-415)||(38312025-38312060)
chr2 (351-433)||(6266339-6266420)
chr2 (4-38)||(28153089-28153123)
chr2 (4-38)||(43896002-43896036)
chr2 (5-38)||(3287004-3287037)
chr2 (351-432)||(3492232-3492312)
chr2 (5-38)||(37063602-37063635)
chr2 (451-530)||(4503479-4503559)
chr2 (329-433)||(32289191-32289294)
[»] chr4 (53 HSPs)
chr4 (287-530)||(5429258-5429500)
chr4 (329-529)||(6655357-6655557)
chr4 (329-530)||(3909716-3909916)
chr4 (318-530)||(37740235-37740446)
chr4 (318-507)||(46570115-46570303)
chr4 (287-522)||(9927817-9928051)
chr4 (315-473)||(26176029-26176186)
chr4 (396-529)||(27417518-27417651)
chr4 (318-473)||(2209111-2209265)
chr4 (332-507)||(54882444-54882619)
chr4 (328-530)||(34570762-34570954)
chr4 (396-529)||(41639033-41639166)
chr4 (396-530)||(36314812-36314946)
chr4 (396-530)||(36329021-36329155)
chr4 (332-522)||(50674420-50674609)
chr4 (329-523)||(5148066-5148259)
chr4 (396-530)||(25861614-25861749)
chr4 (396-528)||(5268781-5268914)
chr4 (329-522)||(6742931-6743123)
chr4 (287-507)||(12745787-12746006)
chr4 (388-529)||(26363725-26363866)
chr4 (397-530)||(8689079-8689212)
chr4 (368-529)||(40630425-40630585)
chr4 (373-530)||(16628430-16628588)
chr4 (396-530)||(54867560-54867694)
chr4 (351-528)||(5143644-5143821)
chr4 (332-515)||(36994183-36994365)
chr4 (329-505)||(52095733-52095909)
chr4 (394-519)||(35661905-35662018)
chr4 (396-530)||(16622874-16623009)
chr4 (421-530)||(29254205-29254314)
chr4 (375-530)||(3777930-3778085)
chr4 (287-473)||(12739943-12740128)
chr4 (287-473)||(12748149-12748334)
chr4 (421-531)||(54200253-54200363)
chr4 (396-507)||(5396272-5396384)
chr4 (329-435)||(13992731-13992836)
chr4 (401-523)||(24968801-24968923)
chr4 (329-433)||(31495756-31495859)
chr4 (394-473)||(56179029-56179109)
chr4 (379-434)||(5370520-5370575)
chr4 (410-529)||(50263265-50263383)
chr4 (329-413)||(54200350-54200434)
chr4 (421-523)||(52083011-52083115)
chr4 (421-523)||(52094018-52094122)
chr4 (226-265)||(17976751-17976790)
chr4 (480-530)||(10047757-10047807)
chr4 (4-38)||(10417168-10417202)
chr4 (4-38)||(13264221-13264255)
chr4 (4-38)||(39696285-39696319)
chr4 (4-38)||(55021643-55021677)
chr4 (5-38)||(47934019-47934052)
chr4 (218-278)||(9680719-9680779)
[»] chr3 (66 HSPs)
chr3 (305-522)||(23410686-23410903)
chr3 (304-530)||(5236805-5237031)
chr3 (329-507)||(49200040-49200218)
chr3 (328-530)||(29812681-29812883)
chr3 (328-507)||(34490633-34490811)
chr3 (351-518)||(44331807-44331974)
chr3 (328-509)||(46173135-46173314)
chr3 (374-529)||(6096167-6096322)
chr3 (328-489)||(44331187-44331348)
chr3 (396-530)||(40592353-40592487)
chr3 (388-529)||(4569411-4569552)
chr3 (328-507)||(31340631-31340810)
chr3 (373-529)||(54593149-54593305)
chr3 (396-530)||(8127011-8127145)
chr3 (381-530)||(29810539-29810688)
chr3 (373-530)||(30709343-30709502)
chr3 (396-530)||(1735876-1736009)
chr3 (329-532)||(7764071-7764275)
chr3 (329-528)||(43404301-43404501)
chr3 (325-434)||(23392260-23392368)
chr3 (373-522)||(55302539-55302687)
chr3 (373-522)||(40734159-40734310)
chr3 (373-530)||(8370037-8370194)
chr3 (396-529)||(40912805-40912938)
chr3 (396-509)||(43402377-43402490)
chr3 (329-530)||(40735048-40735249)
chr3 (373-530)||(47923450-47923609)
chr3 (373-530)||(16264730-16264887)
chr3 (329-510)||(35925891-35926072)
chr3 (351-528)||(37726058-37726234)
chr3 (329-509)||(33386180-33386360)
chr3 (319-473)||(36018253-36018407)
chr3 (397-522)||(36029482-36029608)
chr3 (329-509)||(21711603-21711783)
chr3 (329-473)||(51398445-51398589)
chr3 (394-523)||(7761948-7762078)
chr3 (373-530)||(27027087-27027245)
chr3 (408-522)||(40845042-40845157)
chr3 (394-530)||(5258491-5258629)
chr3 (394-530)||(9636475-9636613)
chr3 (351-507)||(27986003-27986159)
chr3 (329-509)||(37408079-37408258)
chr3 (400-528)||(48438598-48438727)
chr3 (426-530)||(24694767-24694871)
chr3 (396-530)||(39032126-39032260)
chr3 (394-523)||(45094847-45094978)
chr3 (351-413)||(24694713-24694775)
chr3 (373-498)||(27038454-27038580)
chr3 (329-452)||(16498679-16498808)
chr3 (421-507)||(53921855-53921943)
chr3 (480-529)||(36018402-36018451)
chr3 (329-433)||(800728-800831)
chr3 (394-434)||(3393290-3393330)
chr3 (491-522)||(23392266-23392297)
chr3 (4-38)||(3894633-3894667)
chr3 (4-38)||(11820093-11820127)
chr3 (4-38)||(17729080-17729114)
chr3 (4-38)||(19030309-19030343)
chr3 (351-433)||(23198384-23198465)
chr3 (4-38)||(24430238-24430272)
chr3 (452-530)||(25929023-25929101)
chr3 (480-530)||(51398584-51398634)
chr3 (4-38)||(52410188-52410222)
chr3 (5-38)||(38819271-38819304)
chr3 (4-37)||(54626431-54626464)
chr3 (329-433)||(23200583-23200686)
[»] scaffold0286 (1 HSPs)
scaffold0286 (329-529)||(10959-11159)
[»] chr7 (55 HSPs)
chr7 (320-529)||(6360479-6360687)
chr7 (287-530)||(27347501-27347743)
chr7 (287-530)||(14070181-14070423)
chr7 (287-530)||(14380209-14380451)
chr7 (348-522)||(47676492-47676666)
chr7 (287-530)||(26416891-26417133)
chr7 (328-530)||(47674291-47674493)
chr7 (329-530)||(6570212-6570413)
chr7 (318-441)||(48599933-48600055)
chr7 (318-473)||(29608143-29608298)
chr7 (287-530)||(4585739-4585981)
chr7 (285-530)||(4538899-4539143)
chr7 (329-530)||(21983624-21983824)
chr7 (332-530)||(48489053-48489250)
chr7 (381-530)||(18126316-18126464)
chr7 (329-530)||(23554659-23554861)
chr7 (397-530)||(2647280-2647413)
chr7 (373-529)||(32358403-32358559)
chr7 (328-507)||(43863879-43864058)
chr7 (318-413)||(2761746-2761840)
chr7 (373-507)||(2389737-2389871)
chr7 (421-531)||(48491289-48491399)
chr7 (328-413)||(48491218-48491302)
chr7 (333-528)||(2479719-2479913)
chr7 (380-531)||(4796235-4796386)
chr7 (394-530)||(4178458-4178596)
chr7 (396-530)||(33332032-33332166)
chr7 (421-530)||(2761650-2761759)
chr7 (329-523)||(19495590-19495785)
chr7 (329-413)||(1113296-1113380)
chr7 (351-530)||(21989289-21989466)
chr7 (329-528)||(47264026-47264224)
chr7 (421-530)||(1113367-1113476)
chr7 (421-530)||(46515915-46516024)
chr7 (373-530)||(49092070-49092230)
chr7 (411-530)||(496342-496461)
chr7 (351-435)||(25767398-25767481)
chr7 (329-487)||(30026391-30026554)
chr7 (328-413)||(34311285-34311369)
chr7 (329-433)||(48408441-48408544)
chr7 (450-528)||(44847762-44847839)
chr7 (351-435)||(21646495-21646578)
chr7 (329-433)||(39730976-39731079)
chr7 (329-433)||(43504575-43504678)
chr7 (397-474)||(2361561-2361639)
chr7 (4-38)||(3529869-3529903)
chr7 (4-38)||(7401334-7401368)
chr7 (4-38)||(24061276-24061310)
chr7 (4-38)||(29281289-29281323)
chr7 (496-530)||(30025080-30025114)
chr7 (4-38)||(31077850-31077884)
chr7 (480-530)||(31733310-31733360)
chr7 (4-38)||(36174479-36174513)
chr7 (4-38)||(48288356-48288390)
chr7 (5-38)||(49089589-49089622)
[»] chr5 (51 HSPs)
chr5 (286-530)||(32636401-32636644)
chr5 (374-529)||(5057495-5057650)
chr5 (379-530)||(16650970-16651121)
chr5 (373-522)||(42426591-42426741)
chr5 (396-530)||(14520611-14520745)
chr5 (329-506)||(13239372-13239548)
chr5 (287-506)||(37438724-37438942)
chr5 (318-413)||(27014944-27015038)
chr5 (374-522)||(13487869-13488015)
chr5 (320-413)||(19806038-19806130)
chr5 (329-473)||(30683313-30683456)
chr5 (383-530)||(11916540-11916688)
chr5 (330-473)||(42428823-42428966)
chr5 (329-522)||(12083693-12083885)
chr5 (315-413)||(39468976-39469073)
chr5 (421-530)||(19806117-19806226)
chr5 (421-529)||(27015025-27015133)
chr5 (351-528)||(9352872-9353048)
chr5 (328-486)||(40146668-40146825)
chr5 (373-434)||(213007-213068)
chr5 (396-528)||(31004735-31004868)
chr5 (421-507)||(535614-535700)
chr5 (283-433)||(28751027-28751178)
chr5 (396-473)||(38746456-38746533)
chr5 (421-528)||(11181437-11181544)
chr5 (421-507)||(39468903-39468989)
chr5 (457-530)||(16649971-16650044)
chr5 (329-433)||(9789663-9789766)
chr5 (480-523)||(3075980-3076023)
chr5 (480-530)||(533539-533589)
chr5 (375-413)||(11181412-11181450)
chr5 (329-434)||(3076064-3076169)
chr5 (329-433)||(18442087-18442190)
chr5 (329-433)||(26177509-26177612)
chr5 (4-38)||(11897337-11897371)
chr5 (4-38)||(15241485-15241519)
chr5 (4-38)||(16386688-16386722)
chr5 (351-433)||(16407706-16407787)
chr5 (4-38)||(16891435-16891469)
chr5 (329-435)||(24136336-24136441)
chr5 (451-530)||(30182329-30182410)
chr5 (396-434)||(30683269-30683307)
chr5 (4-38)||(39886159-39886193)
chr5 (4-38)||(41319398-41319432)
chr5 (4-38)||(43580967-43581001)
chr5 (5-38)||(8478840-8478873)
chr5 (4-37)||(11786008-11786041)
chr5 (4-37)||(16789159-16789192)
chr5 (451-523)||(25412503-25412576)
chr5 (451-530)||(13342802-13342882)
chr5 (421-508)||(36931956-36932044)
[»] scaffold0014 (1 HSPs)
scaffold0014 (373-529)||(80850-81006)
[»] chr6 (41 HSPs)
chr6 (329-530)||(22964079-22964280)
chr6 (329-530)||(23824113-23824314)
chr6 (397-523)||(24435555-24435681)
chr6 (328-529)||(21593067-21593267)
chr6 (350-522)||(21272525-21272697)
chr6 (349-523)||(10076727-10076900)
chr6 (318-466)||(17759346-17759493)
chr6 (388-507)||(9183381-9183500)
chr6 (396-530)||(31979898-31980032)
chr6 (400-521)||(26661421-26661542)
chr6 (400-521)||(26767392-26767513)
chr6 (329-531)||(31085988-31086191)
chr6 (287-530)||(33211533-33211774)
chr6 (329-530)||(5017011-5017212)
chr6 (396-507)||(5571846-5571957)
chr6 (396-530)||(18234464-18234599)
chr6 (402-507)||(26954674-26954778)
chr6 (396-503)||(603612-603719)
chr6 (351-529)||(3809276-3809450)
chr6 (397-522)||(24714761-24714885)
chr6 (383-528)||(5757047-5757192)
chr6 (344-430)||(26830696-26830781)
chr6 (329-507)||(23896736-23896914)
chr6 (351-432)||(2171959-2172039)
chr6 (451-523)||(16452794-16452867)
chr6 (451-506)||(5413820-5413875)
chr6 (4-38)||(7545418-7545452)
chr6 (4-38)||(12284210-12284244)
chr6 (4-38)||(22997425-22997459)
chr6 (4-38)||(23790942-23790976)
chr6 (451-530)||(30834883-30834964)
chr6 (4-38)||(31802142-31802176)
chr6 (4-38)||(31803542-31803576)
chr6 (5-38)||(3640604-3640637)
chr6 (451-523)||(5406552-5406625)
chr6 (451-523)||(5410877-5410950)
chr6 (5-38)||(7418368-7418401)
chr6 (451-523)||(16452683-16452756)
chr6 (5-38)||(26347494-26347527)
chr6 (383-435)||(22709497-22709549)
chr6 (452-523)||(31405028-31405100)
[»] scaffold0176 (1 HSPs)
scaffold0176 (366-507)||(17635-17776)
[»] scaffold0006 (4 HSPs)
scaffold0006 (381-530)||(6066-6216)
scaffold0006 (396-528)||(2876-3009)
scaffold0006 (329-528)||(132795-132993)
scaffold0006 (329-452)||(149487-149616)
[»] scaffold0087 (2 HSPs)
scaffold0087 (357-528)||(36376-36546)
scaffold0087 (329-528)||(43477-43675)
[»] scaffold0098 (1 HSPs)
scaffold0098 (383-528)||(45582-45727)
[»] scaffold0466 (2 HSPs)
scaffold0466 (421-529)||(6820-6929)
scaffold0466 (325-413)||(6746-6833)
[»] scaffold1519 (1 HSPs)
scaffold1519 (329-435)||(525-630)
[»] scaffold0188 (1 HSPs)
scaffold0188 (329-435)||(17474-17579)
[»] scaffold0002 (1 HSPs)
scaffold0002 (396-530)||(434217-434354)
[»] scaffold0140 (1 HSPs)
scaffold0140 (421-508)||(8024-8112)
[»] scaffold0510 (1 HSPs)
scaffold0510 (329-503)||(1126-1300)
[»] scaffold0024 (1 HSPs)
scaffold0024 (4-38)||(59872-59906)
[»] scaffold0016 (1 HSPs)
scaffold0016 (394-532)||(114270-114409)
[»] scaffold0491 (2 HSPs)
scaffold0491 (329-433)||(9163-9265)
scaffold0491 (329-433)||(11608-11710)


Alignment Details
Target: chr1 (Bit Score: 395; Significance: 0; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 4 - 530
Target Start/End: Complemental strand, 4553527 - 4552996
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgacnnnnnnnnntcaacatataaaacctaactatcaacttaccataatcttccacccacaat----ga 99  Q
    ||||||||||||||||| ||||| || ||||||||         ||||||||||||||||||||| || |||||||||||||||||| ||||||    ||    
T  4553527 aaattgtgtgagctctaaccactagattacttgacaaaaaaaaatcaacatataaaacctaactaccagcttaccataatcttccactcacaatcaatga 4553428  T
Q  100 caacaaa-ataagaggaaccacaannnnnnnatcgatgcgataacatataannnnnnnnactactcctggcatgtttgaataagtggttatcccttgatt 198  Q
    ||||||| ||||||||||||||||       ||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||    
T  4553427 caacaaagataagaggaaccacaatttttttatcgatgcgataacatataattttttttactactcctggcatgtttgaataagtggttatcccttgatt 4553328  T
Q  199 ggaagaaaactgaaacttggaaaacaatttatagaaatattataagttgtttttataagctcttccatacaaccttacaaataatatgtgttgtgtatgc 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4553327 ggaagaaaactgaaacttggaaaacaatttatagaaatattataagttgtttttataagctcttccatacaaccttacaaataatatgtgttgtgtatgc 4553228  T
Q  299 cttcaaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaa 398  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4553227 cttcaaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgaacatgttttgcagggtatccaa 4553128  T
Q  399 tcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtg 498  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4553127 tcgtgacacgattttgagaaaacgtgatatgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcgtgagtcgtacgcatcaaccgtg 4553028  T
Q  499 tcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||||||||||||||||||||||||||||||    
T  4553027 tcacgatttggcaaaacgtgacacgtttttga 4552996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 318 - 530
Target Start/End: Original strand, 49917958 - 49918169
Alignment:
Q  318 ggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgaga 417  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||| || |||| |||||||||||||  |||||||||||||||||||   |    
T  49917958 ggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacaattttgcaatgtcgagagc-tgttttgcagggtgcccaatcgtgacacgattttcgaa 49918056  T
Q  418 aaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgt 517  Q
    |||||||||||||||||  ||||| | | |||||||||||||||||||| ||| || | || ||||||| || ||| ||||||||||||||| |||| ||    
T  49918057 aaacgtgacacgatttttaacttgctgggcacgttttcaggataaggttggtcataccttgggtcgtacacaccaatcgtgtcacgatttgggaaaatgt 49918156  T
Q  518 gacacgtttttga 530  Q
    |||||| ||||||    
T  49918157 gacacgattttga 49918169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 318 - 507
Target Start/End: Original strand, 11348110 - 11348298
Alignment:
Q  318 ggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgaga 417  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||| || |||| ||||||||||||| || ||||||||||||||||||       
T  11348110 ggaaaatttggaatcgtgacacgatttgtgaagcgtgtcacgattttgcaatgtcgagagc-tgttttgcagggtgtctaatcgtgacacgattttggag 11348208  T
Q  418 aaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    ||||||||||||||||||| |||||| | || ||||||||||||||||| ||||||   ||  ||||||||| ||| |||||||||||||    
T  11348209 aaacgtgacacgattttcggcttgttgggcaagttttcaggataaggttggtcgtacattggatcgtacgcaccaaacgtgtcacgattt 11348298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 329 - 522
Target Start/End: Complemental strand, 37033836 - 37033643
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||||||   | |||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||  | |||| ||||||    
T  37033836 aatcgtgacacgatttcataggcgtgtcacgattttgcaatgtcgtgagcatgttttgcagggtgtccaatcgtgacacgattttcgggaaacatgacac 37033737  T
Q  429 gattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacac 522  Q
    |||||||| ||||   | || ||||||||||||||||| || ||| | || |||||||||| ||| ||||||||||||||| ||| ||||||||    
T  37033736 gattttcgccttgcagggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacac 37033643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 287 - 530
Target Start/End: Original strand, 44454737 - 44454979
Alignment:
Q  287 tgttgtgtatgccttcaaaattgtgaatttgggaaaacttggaa-tcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgtttt 385  Q
    |||||| |||| ||||||| ||||||| ||||||||||   ||| ||||||||||||||   |||||||||||||||| || |||||| |||||||||||    
T  44454737 tgttgtttatggcttcaaa-ttgtgaagttgggaaaacaaagaaatcgtgacacgatttcataagcgtgtcacgatttggctatgccgagagcatgtttt 44454835  T
Q  386 gcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgta 485  Q
     | | || ||||||||||||||||||||| | ||||||||||||||||||| |||| | | || ||||||| ||||||||| || ||| | || ||||||    
T  44454836 -ctgagtgtccaatcgtgacacgattttggggaaacgtgacacgattttcggcttgctgggcaagttttcaagataaggttggttgtaccttgggtcgta 44454934  T
Q  486 cgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||  || |||||||||||||||||||||||| |||| ||||||    
T  44454935 cgcactaaacgtgtcacgatttggcaaaacgtggcacgattttga 44454979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 530
Target Start/End: Original strand, 31658816 - 31659058
Alignment:
Q  287 tgttgtgtatgccttcaaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttg 386  Q
    |||||||||| |||||||||||||||| |||| |||    | ||||||||||||||||   | |||||||||||||| |||||| || |||| |||||||    
T  31658816 tgttgtgtattccttcaaaattgtgaagttggaaaacagagaaatcgtgacacgatttcataggcgtgtcacgattttgcaatgtcgagagc-tgttttg 31658914  T
Q  387 cagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtac 486  Q
    ||||||  |||||||||||||||||||| ||||||||||||| |||||   |||| | |  | ||||||||||||||||| || ||| | || |||||||    
T  31658915 cagggtgcccaatcgtgacacgattttgggaaaacgtgacacaattttttgcttgctgggaaagttttcaggataaggttggttgtaccttgggtcgtac 31659014  T
Q  487 gcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||| ||| ||||||||||||||| |||| |||||||| ||||||    
T  31659015 gcaccaaacgtgtcacgatttggtaaaatgtgacacgattttga 31659058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 329 - 530
Target Start/End: Original strand, 10924843 - 10925043
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||||||   | |||||||||||||| |||||| || || | |||||||||||||| ||||||||||||||||||||  |||| |||||||    
T  10924843 aatcgtgacacgatttcataggcgtgtcacgattttgcaatgtcgagaac-tgttttgcagggtacccaatcgtgacacgattttggaaaaatgtgacac 10924941  T
Q  429 gattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttttt 528  Q
    |||||||| |||| | | || |||||||  |||| ||| ||| || | || ||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  10924942 gattttcggcttggtaggcaagttttcaaaataaagttggtcataccttgggtcatacgcatcaaccgtgtcacgatttggcaaaacgtgacacgatttt 10925041  T
Q  529 ga 530  Q
    ||    
T  10925042 ga 10925043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 315 - 522
Target Start/End: Original strand, 3156473 - 3156678
Alignment:
Q  315 ttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttg 414  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||  | |||| | |||||||||||  | ||||||||||||||||||    
T  3156473 ttgggaaaactttgaatcgtgacacgatttgtgaagcgtgtcacgattttgcaatgttgagagc-tattttgcagggtgccaaatcgtgacacgattttg 3156571  T
Q  415 agaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaa 514  Q
     |||||| | |||||||||| |  ||| | |||||||||||||||||||||| |||||| | || ||| ||| || ||| ||||||||  ||||||||||    
T  3156572 ggaaaacataacacgatttttggtttgctggacacgttttcaggataaggttggtcgtaccttg-gtcatacacaccaaacgtgtcaccgtttggcaaaa 3156670  T
Q  515 cgtgacac 522  Q
    ||| ||||    
T  3156671 cgtaacac 3156678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 318 - 507
Target Start/End: Complemental strand, 37879668 - 37879480
Alignment:
Q  318 ggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgaga 417  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||  |||||||||||||   |||||||||||||||||||  |    
T  37879668 ggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgattttgcaatgtcgagag-ttgttttgcagggtgctcaatcgtgacacgattttggaa 37879570  T
Q  418 aaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    ||| ||||||||||||||  |||  | |||| ||||| ||||||||||| |||||| | || |||| ||||| ||| | |||||||||||    
T  37879569 aaatgtgacacgattttcagcttactggacaagtttttaggataaggttggtcgtaccttgggtcgcacgcaccaaacatgtcacgattt 37879480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 380 - 530
Target Start/End: Complemental strand, 28220725 - 28220574
Alignment:
Q  380 tgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgac-ttgtttgacacgttttcaggataaggttagtcgtatcatg 478  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||||||||||||| | |||   |||| || || | ||||||||| |||||| | ||    
T  28220725 tgttttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacgattttcggctttgcacgacaagtatttaagataaggttggtcgtaccttg 28220626  T
Q  479 agtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
     ||||||||||  || ||||||||||||||| ||||||||||||| ||||||    
T  28220625 ggtcgtacgcacaaaacgtgtcacgatttgggaaaacgtgacacgattttga 28220574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 341 - 530
Target Start/End: Original strand, 1833153 - 1833342
Alignment:
Q  341 atttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgactt 440  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||  | |||||| |||||||||||||| |||||| | |||||||||| | |||    
T  1833153 atttgtgaagcgtgtcacgatttcgcaatgccgtgag-ttgttttgcagattgtccaatggtgacacgattttgggaaaacataacacgatttttggctt 1833251  T
Q  441 gtttgacac-gttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    | |    ||  |||||| ||||||||| ||| || | || || ||||||| ||| ||||||||||||||  ||||||||||||| ||||||    
T  1833252 gctgagtacatttttcaagataaggttggtcataccttgggttgtacgcaccaaacgtgtcacgatttgcgaaaacgtgacacgattttga 1833342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 332 - 529
Target Start/End: Original strand, 193016 - 193213
Alignment:
Q  332 cgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgat 431  Q
    ||||||| ||||||  || |||||||||||||   || || ||||||||| |||||||||| ||||||| |||||| ||||||  ||||||||| || ||    
T  193016 cgtgacatgatttggcaatcgtgtcacgatttttgaaggcagtgagcatggtttgcagggtgtccaatcatgacacaattttggaaaaacgtgataccat 193115  T
Q  432 tttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttg 529  Q
    ||||| |||| | | || ||||| |||||||| || |||||| | || |||||||||| ||| |||||| |||||||| ||| ||||||||| |||||    
T  193116 tttcggcttgctgggcaagtttttaggataagattggtcgtaccttgggtcgtacgcaccaaacgtgtcgcgatttgggaaatcgtgacacgattttg 193213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 396 - 528
Target Start/End: Original strand, 16455332 - 16455464
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    ||||||||| ||||||||||| || ||||||| |||||| |   |||||| ||||||||||||||||| ||  ||||| | || ||||||||||||||||    
T  16455332 caatcgtgatacgattttgagcaatcgtgacatgatttttggtatgtttggcacgttttcaggataagtttgctcgtaccttgggtcgtacgcatcaacc 16455431  T
Q  496 gtgtcacgatttggcaaaacgtgacacgttttt 528  Q
    ||| ||||||||||| || ||||||||||||||    
T  16455432 gtgacacgatttggccaatcgtgacacgttttt 16455464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 380 - 530
Target Start/End: Complemental strand, 28223920 - 28223769
Alignment:
Q  380 tgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgac-ttgtttgacacgttttcaggataaggttagtcgtatcatg 478  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||||||||||||| | |||   |||| || || | ||||||||| |||||| | ||    
T  28223920 tgttttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacgattttcggctttgcacgacaagtatttaagataaggttggtcgtaccttg 28223821  T
Q  479 agtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
     ||||||||||  || |||||||| |||||| ||||||||||||| ||||||    
T  28223820 ggtcgtacgcacaaaacgtgtcacaatttgggaaaacgtgacacgattttga 28223769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 396 - 521
Target Start/End: Complemental strand, 37070283 - 37070157
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaac 494  Q
    |||||||| |||||||||| |||||||||||||||||||| | |||||| |  ||||||||||||||||||| |||||| | || |||||||||| |||     
T  37070283 caatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaat 37070184  T
Q  495 cgtgtcacgatttggcaaaacgtgaca 521  Q
    |||| |||||||||| ||| |||||||    
T  37070183 cgtgccacgatttggaaaatcgtgaca 37070157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 381 - 530
Target Start/End: Complemental strand, 13598931 - 13598781
Alignment:
Q  381 gttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatga 479  Q
    ||||| || ||||| |||||||| || ||||||| ||||| |||||||||||||| | |||| | |  ||||||||||||||||||| |||||| | ||     
T  13598931 gtttttcaaggtattcaatcgtgtcatgattttgggaaaatgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgg 13598832  T
Q  480 gtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||||||||| ||| |||||||| ||||||  |||||||||||| ||||||    
T  13598831 gtcgtacgcaccaatcgtgtcacaatttggacaaacgtgacacgattttga 13598781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 396 - 530
Target Start/End: Complemental strand, 3282222 - 3282088
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaac 494  Q
    |||||||| |||||||||||||||||||||||||||||||  ||||| | |  ||||||||| ||||||||| ||| || | || |||||||||| |||     
T  3282222 caatcgtgtcacgattttgagaaaacgtgacacgattttcaaacttgctgggtacgttttcaagataaggttggtcataccttgggtcgtacgcaccaat 3282123  T
Q  495 cgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||| |||||||| | ||||||||||||| ||||||    
T  3282122 cgtgccacgattt-gaaaaacgtgacacgattttga 3282088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 329 - 523
Target Start/End: Original strand, 3206605 - 3206801
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgc-aatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    ||||||||||| |||||  |||||||||||||||| |  |||| || |||  |||||| |||||  |||||||||||||| |||||| ||||||||||||    
T  3206605 aatcgtgacacaatttggcaagcgtgtcacgattttggtaatgtcgagagt-tgtttt-cagggcgtccaatcgtgacacaattttgggaaaacgtgaca 3206702  T
Q  428 cgattttcgacttgtttgacacg-ttttcaggataaggttagtcg-tatcatgagtcgtacgcatcaaccgtgtcacgattt-ggcaaaacgtgacacg 523  Q
    |||||||||||||| | | || | |||| ||||||||||| |||| || | || |||||||||||||| |||| ||| |||| || |||||||||||||    
T  3206703 cgattttcgacttgctgggcaagttttttaggataaggttggtcgttaccttgggtcgtacgcatcaatcgtgacacaatttgggaaaaacgtgacacg 3206801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 329 - 509
Target Start/End: Original strand, 3188970 - 3189151
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgc-aatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    ||||||||||| |||||  |||||||||||||||| |  |||| || |||  |||||| |||||  |||||||||||||| |||||| ||||||||||||    
T  3188970 aatcgtgacacaatttggcaagcgtgtcacgattttggtaatgtcgagagt-tgtttt-cagggcgtccaatcgtgacacaattttgggaaaacgtgaca 3189067  T
Q  428 cgattttcgacttgtttgacacg-ttttcaggataaggttagtcg-tatcatgagtcgtacgcatcaaccgtgtcacgatttgg 509  Q
    |||||||||||||| | | || | |||| ||||||||||| |||| || | || |||||||||||||| |||| ||| ||||||    
T  3189068 cgattttcgacttgctgggcaagttttttaggataaggttggtcgttaccttgggtcgtacgcatcaatcgtgacacaatttgg 3189151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 329 - 509
Target Start/End: Original strand, 3197787 - 3197968
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgc-aatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    ||||||||||| |||||  |||||||||||||||| |  |||| || |||  |||||| |||||  |||||||||||||| |||||| ||||||||||||    
T  3197787 aatcgtgacacaatttggcaagcgtgtcacgattttggtaatgtcgagagt-tgtttt-cagggcgtccaatcgtgacacaattttgggaaaacgtgaca 3197884  T
Q  428 cgattttcgacttgtttgacacg-ttttcaggataaggttagtcg-tatcatgagtcgtacgcatcaaccgtgtcacgatttgg 509  Q
    |||||||||||||| | | || | |||| ||||||||||| |||| || | || |||||||||||||| |||| ||| ||||||    
T  3197885 cgattttcgacttgctgggcaagttttttaggataaggttggtcgttaccttgggtcgtacgcatcaatcgtgacacaatttgg 3197968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 413
Target Start/End: Complemental strand, 30477017 - 30476892
Alignment:
Q  287 tgttgtgtatgccttcaaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttg 386  Q
    ||||||||||| ||||||||||||||| ||| |||   |  |||||||||||||||||   ||||||||||||||||  | | || ||| ||||||||||    
T  30477017 tgttgtgtatgtcttcaaaattgtgaagttgagaatgataagaatcgtgacacgatttagtaagcgtgtcacgatttt-ctaggcagtgggcatgttttg 30476919  T
Q  387 cagggtatccaatcgtgacacgatttt 413  Q
    |||||| || |||||||||||||||||    
T  30476918 cagggtgtctaatcgtgacacgatttt 30476892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 528
Target Start/End: Original strand, 13604138 - 13604336
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    |||||||||||||||   | | |||| |||||||| |  ||| ||||||| || ||||||| || || |||||||||||||||||| | || |||||||     
T  13604138 aatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagc-tggtttgcagtgtgtcaaatcgtgacacgattttgtggaatcgtgacat 13604236  T
Q  429 gattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttt 527  Q
    ||||||| | |||| | |  | ||||||||||||||||| |||||| | || |||||||| ||||| |||| |||||||||| |||||||| |||| |||    
T  13604237 gattttcaaacttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacgatttgg-aaaacgtggcacgattt 13604335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 531
Target Start/End: Complemental strand, 22820005 - 22819810
Alignment:
Q  335 gacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgatttt 434  Q
    |||||||||||||||||||||||||||| | |   || |  ||||||||||    ||| | |||| |||||| ||||||||||||  |||||| ||||||    
T  22820005 gacacgatttgtgaagcgtgtcacgatt-ctcttggcaggaagcatgttttttctggtgttcaatggtgacatgattttgagaaactgtgacatgatttt 22819907  T
Q  435 cgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttgat 531  Q
       | |||||||||||||||||| ||||| || |||||| | || |||||||||||| |||||  ||| |||| || || ||||||||| |||||||    
T  22819906 tcgcatgtttgacacgttttcagaataagtttggtcgtaccttgggtcgtacgcatcgaccgtaacacaattttgccaatcgtgacacgattttgat 22819810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 394 - 523
Target Start/End: Original strand, 20762355 - 20762486
Alignment:
Q  394 tccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatca 492  Q
    ||||||||||||||||||||| |||| |||||||||||||| | |||||| | || | |||||||||||||||| |||||| | |   ||| ||||||||    
T  20762355 tccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcgtacctttgatcgaacgcatca 20762454  T
Q  493 accgtgtcacgatt-tggcaaaacgtgacacg 523  Q
    | |||| |||||||  || |||||||||||||    
T  20762455 atcgtggcacgattggggaaaaacgtgacacg 20762486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 528
Target Start/End: Original strand, 26644469 - 26644611
Alignment:
Q  383 tttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgacacgttttcaggataaggttagtcgtatcatgagt 481  Q
    |||||| ||| || ||||||| |||||||||| ||||||||||||||||||||  ||||||| |  || ||||||| |||||||  |||||   ||| ||    
T  26644469 tttgcacggtgtcaaatcgtggcacgattttgtgaaaacgtgacacgattttcaaacttgttgggtaccttttcagaataaggtcggtcgt---atgggt 26644565  T
Q  482 cgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttttt 528  Q
    |||||||| ||| |||| |||||||||| |||||||| |||| ||||    
T  26644566 cgtacgcaccaatcgtggcacgatttgg-aaaacgtggcacgatttt 26644611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 373 - 530
Target Start/End: Complemental strand, 29652354 - 29652194
Alignment:
Q  373 gtgagcatgttttgcagggtatccaatcgtgacacgattttg-agaaaacgtgacacgattttcgactt-gtttgacacgtttt-caggataaggttagt 469  Q
    ||||||||| ||||||||||   |||||||| |||||||||| | ||||||| | ||||||||| | || ||| |  ||||||| |||||||||||| ||    
T  29652354 gtgagcatggtttgcagggtgctcaatcgtgtcacgattttggaaaaaacgttatacgattttcaaatttgttgggtacgtttttcaggataaggttggt 29652255  T
Q  470 cgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||| | || ||||||| || ||| |||||||||||||||  |||||||||| | ||||||    
T  29652254 cgtaccttgggtcgtacacaccaatcgtgtcacgatttggacaaacgtgacatgattttga 29652194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 362
Target Start/End: Original strand, 15819937 - 15819996
Alignment:
Q  303 aaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatt 362  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |  | |||||||||||    
T  15819937 aaaattgtgaagttgggaaaacttggaatcgtgacacgatttgggtggtgtgtcacgatt 15819996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 329 - 452
Target Start/End: Complemental strand, 13659855 - 13659726
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatcc------aatcgtgacacgattttgagaaaacg 422  Q
    |||||||||| |||||   | |||||||||||||| ||||||||| ||||||||||||  |||| | |      |||||||| ||||||||| ||||| |    
T  13659855 aatcgtgacatgatttcataggcgtgtcacgatttggcaatgccgagagcatgttttgatgggtgttcttgttcaatcgtgatacgattttgggaaaatg 13659756  T
Q  423 tgacacgattttcgacttgtttgacacgtt 452  Q
    || ||||||||||| |||| ||||||||||    
T  13659755 tgtcacgattttcggcttgcttgacacgtt 13659726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 507
Target Start/End: Original strand, 29135762 - 29135847
Alignment:
Q  422 gtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    |||||| |||||||  |||| | | |||||||||||||||||||| |||||| | || |||||||||| ||| |||||||||||||    
T  29135762 gtgacatgattttcagcttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 29135847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 530
Target Start/End: Complemental strand, 30476905 - 30476796
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgac 520  Q
    ||||||||||||||||  ||| | | || ||||||| ||||||||| || | | | || ||||||| || ||| ||||||||||||||| ||||||||||    
T  30476905 cgtgacacgattttcggtttgctgggcaagttttcaagataaggttggttgaaccttgggtcgtacacaccaaacgtgtcacgatttgggaaaacgtgac 30476806  T
Q  521 acgtttttga 530  Q
    ||| ||||||    
T  30476805 acgattttga 30476796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 381
Target Start/End: Original strand, 46064533 - 46064610
Alignment:
Q  304 aaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatg 381  Q
    |||||||||| ||||||| | |  | || ||||||||||||||| | |||||||||||||||||| ||||||||||||    
T  46064533 aaattgtgaagttgggaacattcaggattgtgacacgatttgtgtaccgtgtcacgatttcgcaaggccgtgagcatg 46064610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 510
Target Start/End: Original strand, 46064629 - 46064718
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggc 510  Q
    |||||||||||||| | | || ||| ||| |||||||||||| ||| |||||| | || |||||||| |||||||||| |||||||||||    
T  46064629 cgtgacacgatttttggcatgcttggcacattttcaggataaagttggtcgtaccttgggtcgtacgtatcaaccgtgacacgatttggc 46064718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 530
Target Start/End: Original strand, 21536175 - 21536286
Alignment:
Q  419 aacgtgacacgattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgt 517  Q
    ||||||||||||||||| | |||| | |  ||||||||||||| ||||| |||||| | || |||||||||| ||| |||| | |||||||| |||||||    
T  21536175 aacgtgacacgattttcaaacttgctgggtacgttttcaggatgaggttggtcgtaccttgggtcgtacgcaccaatcgtgccccgatttgg-aaaacgt 21536273  T
Q  518 gacacgtttttga 530  Q
    |||||| ||||||    
T  21536274 gacacgattttga 21536286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 421 - 528
Target Start/End: Complemental strand, 13547763 - 13547657
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgac 520  Q
    |||||||| ||||||  |||| | | ||||||||||  |||||||| |||||| | || |||||||||| ||||||||||||||||||| ||||| | ||    
T  13547763 cgtgacacaattttcagcttgctgggcacgttttcaa-ataaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttgggaaaacataac 13547665  T
Q  521 acgttttt 528  Q
    ||| ||||    
T  13547664 acgatttt 13547657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 421 - 528
Target Start/End: Complemental strand, 13549674 - 13549568
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgac 520  Q
    |||||||| ||||||  |||| | | ||||||||||  |||||||| |||||| | || |||||||||| ||||||||||||||||||| ||||| | ||    
T  13549674 cgtgacacaattttcagcttgctgggcacgttttcaa-ataaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttgggaaaacataac 13549576  T
Q  521 acgttttt 528  Q
    ||| ||||    
T  13549575 acgatttt 13549568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 435
Target Start/End: Original strand, 19360955 - 19361060
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| |||||||| |  ||||||||||| || ||||||||||  | |||||||||||||| ||| |||| ||||||||    
T  19360955 aatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacac 19361053  T
Q  429 gattttc 435  Q
    |||||||    
T  19361054 gattttc 19361060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 435
Target Start/End: Original strand, 19365811 - 19365916
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| |||||||| |  ||||||||||| || ||||||||||  | |||||||||||||| ||| |||| ||||||||    
T  19365811 aatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacac 19365909  T
Q  429 gattttc 435  Q
    |||||||    
T  19365910 gattttc 19365916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 433
Target Start/End: Original strand, 51765055 - 51765136
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattt 433  Q
    |||| ||||||||||  ||||||||||| || ||||||||||  | |||||||||||||| ||||| || |||||||||||||    
T  51765055 cgtgacacgatttcgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgattt 51765136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 473
Target Start/End: Original strand, 16124245 - 16124319
Alignment:
Q  400 cgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgacacgttttcaggataaggttagtcgta 473  Q
    |||| |||||||||  ||||||||||||||||||||  |||| || |  ||||||||||||||||||| ||||||    
T  16124245 cgtgtcacgattttcggaaaacgtgacacgattttcaaactttttgggtacgttttcaggataaggttggtcgta 16124319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 27642708 - 27642674
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  27642708 aaattgtgtgagctctagccactagactacttgac 27642674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 29188725 - 29188759
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  29188725 aaattgtgtgagctctagccactagactacttgac 29188759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 52369686 - 52369720
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  52369686 aaattgtgtgagctctagccactagactacttgac 52369720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 3560361 - 3560328
Alignment:
Q  5 aattgtgtgagctctagccactcgactacttgac 38  Q
    |||||||||||||||||||||| |||||||||||    
T  3560361 aattgtgtgagctctagccactagactacttgac 3560328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 433
Target Start/End: Original strand, 9986895 - 9986931
Alignment:
Q  397 aatcgtgacacgattttgagaaaacgtgacacgattt 433  Q
    |||||||||||||||||| |||| |||||||||||||    
T  9986895 aatcgtgacacgattttgggaaatcgtgacacgattt 9986931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 451 - 530
Target Start/End: Complemental strand, 13316745 - 13316665
Alignment:
Q  451 ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacga-tttggcaaaacgtgacacgtttttga 530  Q
    |||||||||||||||| |||||| | ||  ||||||||||||| |||| ||||| |  || ||||||||||||| ||||||    
T  13316745 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgagtggggaaaaacgtgacacgattttga 13316665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 15820048 - 15820104
Alignment:
Q  451 ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    |||| ||||||||||| |||||| | || |||||||||||||||| |||| ||||||    
T  15820048 tttttaggataaggttggtcgtaccttgggtcgtacgcatcaaccatgtctcgattt 15820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 329 - 413
Target Start/End: Original strand, 24202294 - 24202377
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgatttt 413  Q
    ||||||||||||| ||  | | |||| ||||||||||  ||||||||||| || ||||||||||  | |||||||||||||||||    
T  24202294 aatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatttt 24202377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 8e-87; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 289 - 530
Target Start/End: Complemental strand, 4743783 - 4743541
Alignment:
Q  289 ttgtgtatgccttcaaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgca 388  Q
    |||| |||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||| |    
T  4743783 ttgtttatgccttcaaatttgtgaagttgggaaaacttggaatcgtgacacgattagtgaagcatgtcacaatttcgcaatgccgtgagcatgttttgaa 4743684  T
Q  389 gggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacg 487  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||| |||||||||||||||| |||||| | || ||||||||    
T  4743683 gggtgtccaatcgtgacacgattttgaggaaacgtgacacgattttcgacttgcttggcacgtttttcaggataaggttggtcgtaccgtgggtcgtacg 4743584  T
Q  488 catcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||||||||||||| |||||||||||||| |||||| |||||    
T  4743583 catcaaccgtgtcacaatttggcaaaacgtcacacgtatttga 4743541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 341 - 530
Target Start/End: Original strand, 30142973 - 30143162
Alignment:
Q  341 atttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgactt 440  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||| |||    
T  30142973 atttgtgaagcgtgtcacgatttcgcaatttcgtgagcatgttttgcagggtgtccaatcgtgacacgattttgggaaaatgtgacacgattttcggctt 30143072  T
Q  441 gtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    | | |||| ||||| ||||||||||| ||||||   || |||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  30143073 gctggacaagttttaaggataaggttggtcgtactttgggtcgtacgcaccaaccgtgtcacgatttggcaaaacgtgacacgattttga 30143162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 351 - 530
Target Start/End: Original strand, 43036064 - 43036243
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg 450  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||| | || |    
T  43036064 cgtgacacgatttcgcaatgccgtgagcatgttttgcagggtgtccaatcgtgacacgattttggaaaaacgtgacacgattttcgacttgttgggcaag 43036163  T
Q  451 ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||||||||||||||  ||||| | ||  ||||||||| ||| ||||||||||||||| ||||||||||||| ||||||    
T  43036164 ttttcaggataaggttgatcgtaccttggatcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttga 43036243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 329 - 521
Target Start/End: Complemental strand, 42435758 - 42435566
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||| ||||   | |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||    
T  42435758 aatcgtgacacaatttcataggcgtgtcacgattttgcaatgccgtgagcatgttttgcagggtgtccaatcgtgacacgattttggggaaacgtgacac 42435659  T
Q  429 gattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgaca 521  Q
    |||||||| |||| ||| || ||||||||||||||||| |||||| | || |||||||||| ||| ||||||||||||||| ||| |||||||    
T  42435658 gattttcgtcttgcttggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgaca 42435566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 328 - 531
Target Start/End: Original strand, 4731277 - 4731479
Alignment:
Q  328 gaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    ||||||||||||||||||  || |||||||||||||||||||| ||||||| |||||| |||||| ||||||||||||||||||||| |||||| |||||    
T  4731277 gaatcgtgacacgatttgacaaccgtgtcacgatttcgcaatgtcgtgagc-tgttttacagggtgtccaatcgtgacacgattttgggaaaacatgaca 4731375  T
Q  428 cgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttt 527  Q
     |||||||| |||| | ||||||||||||| ||||| || |||||| | || | |||| ||| |||| |||||||||||||||||||||||||||| |||    
T  4731376 tgattttcggcttgctggacacgttttcagaataagattggtcgtaccttgggccgtaggcaccaactgtgtcacgatttggcaaaacgtgacacgattt 4731475  T
Q  528 tgat 531  Q
    ||||    
T  4731476 tgat 4731479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 330 - 530
Target Start/End: Complemental strand, 1345918 - 1345717
Alignment:
Q  330 atcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacg 429  Q
    ||||||| |||||||||||||  ||||| ||||| ||||||||| ||||||||| |||||||| | |||||||||||||| |||||||||| |||||||     
T  1345918 atcgtgatacgatttgtgaagtatgtcatgattttgcaatgccgagagcatgttctgcagggtgttcaatcgtgacacga-tttgagaaaatgtgacaca 1345820  T
Q  430 attttcgacttgtttgacacgttttcaggataaggttagtcgt--atcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttt 527  Q
    ||||||  |||| |||||||||||||||||||||||| |||||  | | || |||||||||||||||| ||||||| |||    |||||||||||| |||    
T  1345819 attttcagcttgcttgacacgttttcaggataaggttggtcgtacaccttgggtcgtacgcatcaaccatgtcacggttttaggaaacgtgacacgattt 1345720  T
Q  528 tga 530  Q
    |||    
T  1345719 tga 1345717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 328 - 507
Target Start/End: Original strand, 4733444 - 4733622
Alignment:
Q  328 gaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    ||||| ||||||||||||  ||  ||||||||||||||||||| ||||||| |||||| |||||| | ||||||||||||||||||| ||||||||||||    
T  4733444 gaatcatgacacgatttggcaactgtgtcacgatttcgcaatgtcgtgagc-tgttttccagggtgttcaatcgtgacacgattttgggaaaacgtgaca 4733542  T
Q  428 cgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    ||||||||| |||  |  ||||||||||||||||  ||| |||||| | || |||||||||| |||||||||||||||||    
T  4733543 cgattttcggctttctaaacacgttttcaggatacagtttgtcgtaccttgggtcgtacgcaccaaccgtgtcacgattt 4733622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 351 - 507
Target Start/End: Original strand, 40221188 - 40221343
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg 450  Q
    ||||||||||||| |  |||||||||||||||||||  | || |||||||||| |||||||||| ||||||||||||||||||||  |||||| ||||||    
T  40221188 cgtgtcacgattttggcatgccgtgagcatgttttgt-gagtgtccaatcgtgtcacgattttgggaaaacgtgacacgattttcagcttgttggacacg 40221286  T
Q  451 ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    |||||||||||||||| |||||  | || |||||||||| ||| |||||||||||||    
T  40221287 ttttcaggataaggtttgtcgtgccttgggtcgtacgcaccaaacgtgtcacgattt 40221343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 373 - 523
Target Start/End: Original strand, 15212448 - 15212599
Alignment:
Q  373 gtgagcatg-ttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcg 471  Q
    ||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| |   || ||||||||||||||||| ||||    
T  15212448 gtgagcatggttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgagcaagttttcaggataaggttggtcg 15212547  T
Q  472 tatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacg 523  Q
    || | || |||||||||| ||| ||||||||||||| | |||| ||||||||    
T  15212548 taccttgggtcgtacgcaccaaacgtgtcacgatttaggaaaatgtgacacg 15212599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 382 - 507
Target Start/End: Original strand, 27810970 - 27811095
Alignment:
Q  382 ttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagt 481  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| | | || ||||||||||||||||| |||||||| || ||    
T  27810970 ttttgcagggtgtccaatcgtgacacgattttgagaaaatgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtatcttgggt 27811069  T
Q  482 cgtacgcatcaaccgtgtcacgattt 507  Q
     ||||||| ||| |||||||||||||    
T  27811070 tgtacgcaccaaacgtgtcacgattt 27811095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 329 - 530
Target Start/End: Original strand, 10014778 - 10014979
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    |||| |||||||||||||| | | || ||| ||||  | ||| |||||||||||||| |||||| ||||||||||||||||||||| | || | ||||||    
T  10014778 aatcatgacacgatttgtggaccatgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacac 10014877  T
Q  429 gattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttttt 528  Q
    |||||| | | || ||| ||||||| |||||||||||| |||||| | || |||||| ||||||| |||||||||||||| | ||  ||||||| |||||    
T  10014878 gatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacgatttgaccaattgtgacacattttt 10014977  T
Q  529 ga 530  Q
    ||    
T  10014978 ga 10014979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 377 - 523
Target Start/End: Original strand, 22975983 - 22976129
Alignment:
Q  377 gcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatca 476  Q
    ||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||||||  |||| |||||| ||||||||||||||||| ||||||       
T  22975983 gcatggttttcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcagcttgcttgacaagttttcaggataaggtttgtcgtacat 22976082  T
Q  477 tgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacg 523  Q
    || |||| ||||| ||| |||||||||||| || ||| ||| |||||    
T  22976083 tgggtcgcacgcaccaaacgtgtcacgattcgggaaatcgtaacacg 22976129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 329 - 530
Target Start/End: Complemental strand, 12703187 - 12702986
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgc-aatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    |||||||||| ||||||  |||||||||||||||| || |||| || |||  |||||| ||| || ||||||||||||||||||||| ||||||||||||    
T  12703187 aatcgtgacatgatttggcaagcgtgtcacgattttgctaatgtcgagagt-tgtttt-cagagtgtccaatcgtgacacgattttgggaaaacgtgaca 12703090  T
Q  428 cgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt-ggcaaaacgtgacacgttt 526  Q
    ||||||||  |||| |   || | ||||||||||||||| ||||||   || |||||||||| ||  ||||||||||||| || ||||||||||||| ||    
T  12703089 cgattttcagcttgctaagcaagctttcaggataaggttggtcgtacattgggtcgtacgcaccatacgtgtcacgatttgggaaaaacgtgacacgatt 12702990  T
Q  527 ttga 530  Q
    ||||    
T  12702989 ttga 12702986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 373 - 507
Target Start/End: Original strand, 11383451 - 11383585
Alignment:
Q  373 gtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgt 472  Q
    ||||||||| |||  ||||| |||||| |||||||||||||| ||||||||||||||||||||  |||| | | ||  |||||| ||||||||| |||||    
T  11383451 gtgagcatggtttttagggtgtccaattgtgacacgattttgggaaaacgtgacacgattttcagcttgctgggcaaattttcaagataaggttggtcgt 11383550  T
Q  473 atcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    |   || ||||||||||||||||||||||||||||    
T  11383551 actttgggtcgtacgcatcaaccgtgtcacgattt 11383585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 373 - 530
Target Start/End: Original strand, 5702037 - 5702196
Alignment:
Q  373 gtgagcatg-ttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacacgttttcaggataaggttagtc 470  Q
    ||||||||| |||||||||||   |||||||| ||||||||||  ||||||||||||||||||| | |||| | |  || |||||||||||||||| |||    
T  5702037 gtgagcatggttttgcagggtgctcaatcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgctgggtacattttcaggataaggttggtc 5702136  T
Q  471 gtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||| | ||  | ||||||| ||| |||||||||||||||||||||||| |||| ||||||    
T  5702137 gtaccttggattgtacgcaccaatcgtgtcacgatttggcaaaacgtgtcacgattttga 5702196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 394 - 530
Target Start/End: Complemental strand, 1746703 - 1746565
Alignment:
Q  394 tccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatca 492  Q
    ||||||||||||||||||||| |||| |||||||||||||| | |||| | | || | |||||||||||||||| |||||| | ||  ||||||||||||    
T  1746703 tccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatca 1746604  T
Q  493 accgtgtcacgatt-tggcaaaacgtgacacgtttttga 530  Q
    | |||| |||||||  || ||||||||||||| ||||||    
T  1746603 atcgtggcacgattggggaaaaacgtgacacgattttga 1746565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 394 - 530
Target Start/End: Original strand, 31217940 - 31218078
Alignment:
Q  394 tccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatca 492  Q
    |||||| |||||||||||||| |||| |||||||||||||| | |||||| | || | |||| ||||||||||| |||||| | ||  || |||||||||    
T  31217940 tccaattgtgacacgattttgggaaatcgtgacacgatttttggcttgttgggcaagatttttaggataaggttggtcgtaccttggatcatacgcatca 31218039  T
Q  493 accgtgtcacgatttgg-caaaacgtgacacgtttttga 530  Q
    | |||| ||||||| ||  ||||||||||||| ||||||    
T  31218040 atcgtgacacgattgggaaaaaacgtgacacgattttga 31218078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 397 - 523
Target Start/End: Complemental strand, 34254810 - 34254682
Alignment:
Q  397 aatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    |||| ||||||||||||| |||| |||||||||||||| |  ||| | | || | |||||||||||||||| |||||| | || |||||||||||||| |    
T  34254810 aatcatgacacgattttgggaaatcgtgacacgatttttggattgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatc 34254711  T
Q  496 gtgtcacgatt-tggcaaaacgtgacacg 523  Q
    ||| |||||||  || |||||||||||||    
T  34254710 gtggcacgattggggaaaaacgtgacacg 34254682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 523
Target Start/End: Complemental strand, 34256989 - 34256858
Alignment:
Q  394 tccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatca 492  Q
    ||||||||||||||||||||| |||| |||||||||||||| | |||| |   || | ||||||||||||| || || ||| | || |||||||||||||    
T  34256989 tccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgagcaagattttcaggataagattggttgtaccttgggtcgtacgcatca 34256890  T
Q  493 accgtgtcacgatt-tggcaaaacgtgacacg 523  Q
    | |||| |||||||  || |||||||||||||    
T  34256889 atcgtggcacgattggggaaaaacgtgacacg 34256858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 394 - 507
Target Start/End: Complemental strand, 19945824 - 19945710
Alignment:
Q  394 tccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatca 492  Q
    ||||||||||||||||||||  |||| |||||||||||||| | |||||| |  | | ||||||||||||||||  ||||| | ||  ||||||||||||    
T  19945824 tccaatcgtgacacgattttaggaaatcgtgacacgatttttggcttgttggggaagattttcaggataaggttgatcgtaccttggatcgtacgcatca 19945725  T
Q  493 accgtgtcacgattt 507  Q
    | |||| ||||||||    
T  19945724 atcgtggcacgattt 19945710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 444 - 530
Target Start/End: Original strand, 33351884 - 33351970
Alignment:
Q  444 tgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||| || |||||||||||||| |||||| | || ||| |||||| ||| ||||||| ||||||| ||||||||||||| ||||||    
T  33351884 tgacaagtattcaggataaggttggtcgtaccttgggtcatacgcaccaaacgtgtcatgatttgggaaaacgtgacacgattttga 33351970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 394 - 507
Target Start/End: Original strand, 42497898 - 42498012
Alignment:
Q  394 tccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatca 492  Q
    ||||||||||||||||||||| ||||  ||||||||||| | | |||| | | || | ||||||||||||||||||||||| | || ||| |||||||||    
T  42497898 tccaatcgtgacacgattttgggaaattgtgacacgattattggcttgctgggcaagattttcaggataaggttagtcgtaccttgggtcctacgcatca 42497997  T
Q  493 accgtgtcacgattt 507  Q
    | |||| || |||||    
T  42497998 atcgtgacatgattt 42498012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 4283039 - 4283140
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgac 520  Q
    |||||||||||||||| |||| | | || ||||||||||||||||| |||||| | || |||||| ||| ||| ||||| | ||||||| ||| ||||||    
T  4283039 cgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtatgcaccaaacgtgttaggatttgggaaatcgtgac 4283138  T
Q  521 ac 522  Q
    ||    
T  4283139 ac 4283140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 519
Target Start/End: Original strand, 19175314 - 19175437
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaac 494  Q
    |||||||| |||||||||| |||||||||||| |||||||  ||||| | |  ||||||||||||||||||| ||  || | || |||||| ||| |||     
T  19175314 caatcgtgtcacgattttgggaaaacgtgacatgattttcaaacttgctgggtacgttttcaggataaggttggttataccttgggtcgtatgcaccaat 19175413  T
Q  495 cgtgtcacgatttggcaaaacgtga 519  Q
    |||| |||||||||| |||||||||    
T  19175414 cgtgccacgatttgg-aaaacgtga 19175437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 33351789 - 33351888
Alignment:
Q  328 gaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatg-ttttgcagggtatccaatcgtgacacgattttgagaaaacgtgac 426  Q
    |||||||||||||||||   ||||||||||||||||   |  || |||| |||| ||||||||||| ||||||||||||||||||||| |||||| ||||    
T  33351789 gaatcgtgacacgatttagcaagcgtgtcacgattttttag-gcagtgaacatggttttgcagggtgtccaatcgtgacacgattttgggaaaacatgac 33351887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 512
Target Start/End: Complemental strand, 3051610 - 3051519
Alignment:
Q  422 gtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacg-atttggcaa 512  Q
    ||||||||||||| | | ||||||||||||||||| ||||||||| ||||||   || |||||| ||||||| |||| |||| |||||||||    
T  3051610 gtgacacgatttttggcatgtttgacacgttttcaagataaggttggtcgtacattgggtcgtatgcatcaatcgtgacacgaatttggcaa 3051519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 472
Target Start/End: Original strand, 10929492 - 10929567
Alignment:
Q  397 aatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgt 472  Q
    |||||||||||||||||||  || ||||| |||||||| | | || |||||||||||| ||||||||||| |||||    
T  10929492 aatcgtgacacgattttgatcaatcgtgatacgatttttggcatgcttgacacgttttgaggataaggttggtcgt 10929567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 507
Target Start/End: Original strand, 4696251 - 4696321
Alignment:
Q  437 acttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    ||||||| | |||||||||||||||||||| |||||| | || |||||||||| ||| |||| ||||||||    
T  4696251 acttgttgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgacacgattt 4696321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 435
Target Start/End: Complemental strand, 7412909 - 7412804
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||||||  | | |||| |||||||  | |||||||||||| || |||||||||| || |||||||  || |||||| |||| ||||||||    
T  7412909 aatcgtgacacgattttggcatcgtgacacgattctgtaatgccgtgagc-tggtttgcagggtgtcaaatcgtggtacaattttgtgaaatcgtgacac 7412811  T
Q  429 gattttc 435  Q
    |||||||    
T  7412810 gattttc 7412804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 435
Target Start/End: Original strand, 1261479 - 1261562
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttc 435  Q
    |||| ||||||||||  |||||||||||  |||| |||||||  | |||||||||||||| ||| |||| |||||||||||||||    
T  1261479 cgtgacacgatttcgtgatgccgtgagctagttt-gcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttc 1261562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 433
Target Start/End: Original strand, 2627361 - 2627464
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| ||||||||||  || |||||||| || |||||| |||  | |||||||||||||||||| |||| ||||||||    
T  2627361 aatcgtgacacgaatttggcatcgtgacacgatttcgtgattccgtgagc-tggtttgcatggtgccaaatcgtgacacgattttgggaaatcgtgacac 2627459  T
Q  429 gattt 433  Q
    |||||    
T  2627460 gattt 2627464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 530
Target Start/End: Original strand, 23799209 - 23799292
Alignment:
Q  447 cacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||||||| || |||||||| ||||||   || |||||||||| |||  ||||||||||||||  |||||||||||| ||||||    
T  23799209 cacgtttttagaataaggttggtcgtacgttgggtcgtacgcaccaattgtgtcacgatttggacaaacgtgacacgattttga 23799292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 6942512 - 6942478
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  6942512 aaattgtgtgagctctagccactagactacttgac 6942478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 38344138 - 38344172
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  38344138 aaattgtgtgagctctagccactagactacttgac 38344172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 43283947 - 43283913
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  43283947 aaattgtgtgagctctagccactagactacttgac 43283913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 44673629 - 44673595
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  44673629 aaattgtgtgagctctagccactagactacttgac 44673595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 7813534 - 7813501
Alignment:
Q  5 aattgtgtgagctctagccactcgactacttgac 38  Q
    |||||||||||||||||||||| |||||||||||    
T  7813534 aattgtgtgagctctagccactggactacttgac 7813501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 13647437 - 13647404
Alignment:
Q  5 aattgtgtgagctctagccactcgactacttgac 38  Q
    |||||||||||||||||||||| |||||||||||    
T  13647437 aattgtgtgagctctagccactagactacttgac 13647404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 13747862 - 13747829
Alignment:
Q  5 aattgtgtgagctctagccactcgactacttgac 38  Q
    |||||||||||||||||||||| |||||||||||    
T  13747862 aattgtgtgagctctagccactagactacttgac 13747829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 256
Target Start/End: Complemental strand, 17121203 - 17121170
Alignment:
Q  223 caatttatagaaatattataagttgtttttataa 256  Q
    ||||||||||| ||||||||||||||||||||||    
T  17121203 caatttatagacatattataagttgtttttataa 17121170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 24458406 - 24458439
Alignment:
Q  5 aattgtgtgagctctagccactcgactacttgac 38  Q
    |||||||||||||||||||||| |||||||||||    
T  24458406 aattgtgtgagctctagccactagactacttgac 24458439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 43656126 - 43656159
Alignment:
Q  5 aattgtgtgagctctagccactcgactacttgac 38  Q
    |||||||||||||||||||||| |||||||||||    
T  43656126 aattgtgtgagctctagccactagactacttgac 43656159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 451 - 530
Target Start/End: Original strand, 17982394 - 17982474
Alignment:
Q  451 ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatt-tggcaaaacgtgacacgtttttga 530  Q
    |||| ||||||||||| |||||| | ||  ||||||||||||| |||| |||||||  || ||||||||||||| ||||||    
T  17982394 tttttaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattttga 17982474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 137; Significance: 3e-71; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 299 - 531
Target Start/End: Complemental strand, 20994 - 20762
Alignment:
Q  299 cttcaaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaa 398  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||    
T  20994 cttcaaaattgtgaagttgggaaaacttgcgatcgtgacacgatttgtgaagcgtgtcacgattttgcaatgtcgtgagcatgttttgcagggtgtccaa 20895  T
Q  399 tcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtg 498  Q
    || ||||||||||||| ||||||||||||||||||||| |||||| |  | ||||| || |||||||| |||||| | || ||||||||||  || ||||    
T  20894 tcatgacacgattttgggaaaacgtgacacgattttcggcttgttgggaaagtttttagaataaggttggtcgtaccttgggtcgtacgcactaaacgtg 20795  T
Q  499 tcacgatttggcaaaacgtgacacgtttttgat 531  Q
    ||||||||||||||||||| ||||| |||||||    
T  20794 tcacgatttggcaaaacgtaacacgattttgat 20762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 136; Significance: 1e-70; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 304 - 530
Target Start/End: Complemental strand, 36318584 - 36318357
Alignment:
Q  304 aaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtg 403  Q
    ||||||||||  | |||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||| ||||||||||    
T  36318584 aaattgtgaagataggaaaacttggaatcgtgacacgatttgtgaaacgtgtcacgatttcgcaatgtcgagagcatgttttgcagggtgtccaatcgtg 36318485  T
Q  404 acacga-ttttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcac 502  Q
    |||||| ||||| | ||||||||||||||||||| |||| | | |||||||||||||||||||| |||||| | ||| ||||||||| ||||||||||||    
T  36318484 acacgatttttggggaaacgtgacacgattttcggcttgctggccacgttttcaggataaggttggtcgtaccttgaatcgtacgcaccaaccgtgtcac 36318385  T
Q  503 gatttggcaaaacgtgacacgtttttga 530  Q
     ||||| |||||||||||||| ||||||    
T  36318384 aatttgacaaaacgtgacacgattttga 36318357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 315 - 530
Target Start/End: Complemental strand, 2837413 - 2837192
Alignment:
Q  315 ttgggaaaacttggaatcgtgacacgatttg-------tgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacac 407  Q
    |||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||| |  ||||  |||||||||||| ||||||||||||||    
T  2837413 ttgggaaaactttgaatcgtgacacgatttgcgatttgtgaagcgtgtcacgattttgcaatgtcaagagcg-gttttgcagggtgtccaatcgtgacac 2837315  T
Q  408 gattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    ||||||| ||||||||||||||||||||  |||| | |  | ||||||||||||||||| |||||| | || |||||||||| ||| ||||||| |||||    
T  2837314 gattttgggaaaacgtgacacgattttcaccttgctgggtaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcatgattt 2837215  T
Q  508 ggcaaaacgtgacacgtttttga 530  Q
    || ||||||| ||||| ||||||    
T  2837214 gggaaaacgtaacacgattttga 2837192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 329 - 530
Target Start/End: Complemental strand, 34389432 - 34389232
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgc-aatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    |||| ||||||||||||  |||||||||||||||| |  |||| || |||  |||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  34389432 aatcatgacacgatttggcaagcgtgtcacgattttggtaatgtcgagagt-tgtttt-cagggtgtccaatcgtgacacgattttgggaaaacgtgaca 34389335  T
Q  428 cgattttc-gacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttt 526  Q
    ||||||||  ||||| | |  ||||||||||||||||||| |||||| | || |||||||||| ||| ||||||||||||||| ||||||||||||| ||    
T  34389334 cgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttgg-aaaacgtgacacgatt 34389236  T
Q  527 ttga 530  Q
    ||||    
T  34389235 ttga 34389232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 396 - 530
Target Start/End: Complemental strand, 20522737 - 20522603
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||| | | |||||||||||||||||||| |||||| | || |||||||||| ||| |    
T  20522737 caatcgtgtcacgattttgagaaaacgtgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatc 20522638  T
Q  496 gtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||||| ||||||  |||||||||||| ||||||    
T  20522637 gtgtcacaatttggacaaacgtgacacgattttga 20522603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 405 - 531
Target Start/End: Original strand, 14698600 - 14698726
Alignment:
Q  405 cacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacga 504  Q
    |||||||||| |||||||||||||||||||| ||||||| | ||| |||||||||||||||| |||||| | || |||||||||| ||||| | ||||||    
T  14698600 cacgattttgggaaaacgtgacacgattttcaacttgttgggcacattttcaggataaggttggtcgtaccttgggtcgtacgcaccaaccatttcacga 14698699  T
Q  505 tttggcaaaacgtgacacgtttttgat 531  Q
    |||||  |||||||||||| |||||||    
T  14698700 tttggacaaacgtgacacgattttgat 14698726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 329 - 506
Target Start/End: Complemental strand, 36988624 - 36988447
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgc-aatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    |||||||| ||||||||  |||||||||||||||| |  |||| || |||| |||||| |||||| ||||||||||||| ||||||| ||||||||||||    
T  36988624 aatcgtgagacgatttggcaagcgtgtcacgattttggtaatgtcgagagc-tgtttt-cagggtgtccaatcgtgacatgattttgggaaaacgtgaca 36988527  T
Q  428 cgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatt 506  Q
    |||||||||||||| | | || | |||||||||||||||| |||||| | || ||||||||||||||  ||| |||||||    
T  36988526 cgattttcgacttgctgggcaagtttttcaggataaggttggtcgtaccttgggtcgtacgcatcaattgtgacacgatt 36988447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 329 - 522
Target Start/End: Original strand, 23077987 - 23078179
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||||||    | |||||||||||||| ||  || |||||||||  ||| |||||   |||| ||| |||||||||| |||||||||||||    
T  23077987 aatcgtgacacgatttcatcaacgtgtcacgatttcccag-gcagtgagcatggattgtagggtgctcaattgtgtcacgattttgggaaaacgtgacac 23078085  T
Q  429 gattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacac 522  Q
    ||||||| | |||||| |  ||||||||||||||||||| |||||||| || |||||||||| ||| |||| |||||||||| ||||||||||||    
T  23078086 gattttcaaacttgttgggtacgttttcaggataaggttggtcgtatcttgggtcgtacgcaccaatcgtgccacgatttgg-aaaacgtgacac 23078179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 373 - 528
Target Start/End: Original strand, 33528182 - 33528338
Alignment:
Q  373 gtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgacacgttttcaggataaggttagtcg 471  Q
    ||||||||| ||||||||||   |||||||| |||||||||| ||||||||||||||||||||  ||||| | |  |||||||||| ||||||||  |||    
T  33528182 gtgagcatggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgctgggtacgttttcagaataaggttgatcg 33528281  T
Q  472 tatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttttt 528  Q
    || | || |||||||||| ||| |||||||||||||||  |||||||||||| ||||    
T  33528282 taccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgatttt 33528338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 396 - 530
Target Start/End: Complemental strand, 21630460 - 21630326
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    |||||||| ||| |||||| |||||| ||||||||||||| ||||| | | |||||||||||||||||||| ||||||   || ||||||| || ||| |    
T  21630460 caatcgtgtcacaattttgggaaaacatgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtactttgggtcgtacacaccaatc 21630361  T
Q  496 gtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||||||||||||  |||||||||||| ||||||    
T  21630360 gtgtcacgatttggacaaacgtgacacgattttga 21630326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 351 - 528
Target Start/End: Original strand, 28258715 - 28258891
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacac 449  Q
    |||| |||||||| | |||||||||||| || |||||||||| || ||||||| ||| |||||| |||| ||||||||||||||| | |||| | |  |     
T  28258715 cgtgacacgattttgtaatgccgtgagc-tggtttgcagggtgtcaaatcgtggcacaattttgtgaaatcgtgacacgattttcaaacttgctggttaa 28258813  T
Q  450 gttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttttt 528  Q
    ||||||||||||||||| |||||| | || |||||||||||||| |||| |||||||||| |||||||| |||| ||||    
T  28258814 gttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgatttgg-aaaacgtggcacgatttt 28258891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 396 - 518
Target Start/End: Complemental strand, 39483392 - 39483269
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaac 494  Q
    |||||||| |||||||||| |||||||||||||||||||| | |||||| |  ||||||||||||||||||| |||||| | || ||| |||||| |||     
T  39483392 caatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcttacgcaccaat 39483293  T
Q  495 cgtgtcacgatttggcaaaacgtg 518  Q
    |||||||||||||||  |||||||    
T  39483292 cgtgtcacgatttggacaaacgtg 39483269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 441
Target Start/End: Original strand, 29867499 - 29867610
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgc-aatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    |||||||||||||||||  ||||||| |||||||| |  |||| || |||  |||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  29867499 aatcgtgacacgatttggcaagcgtgacacgattttggtaatgtcgagagt-tgtttt-cagggtgtccaatcgtgacacgattttgggaaaacgtgaca 29867596  T
Q  428 cgattttcgacttg 441  Q
    ||||||||||||||    
T  29867597 cgattttcgacttg 29867610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 473
Target Start/End: Original strand, 39284516 - 39284660
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgtttt-gcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    ||||||||||||| |||  || |||||||||||||  | | || ||||||||| ||| ||||||| ||| ||||||||||||||||| ||||||||||||    
T  39284516 aatcgtgacacgaattggcaaacgtgtcacgatttt-ctaggcagtgagcatggtttcgcagggtgtcctatcgtgacacgattttgggaaaacgtgaca 39284614  T
Q  428 cgattttcgacttgtttgacacgttttcaggataaggttagtcgta 473  Q
    | ||||||| |||| | |  | ||||||||||||||||| ||||||    
T  39284615 caattttcggcttgctgggaaagttttcaggataaggttggtcgta 39284660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 388 - 530
Target Start/End: Original strand, 45099432 - 45099576
Alignment:
Q  388 agggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtac 486  Q
    ||||| |||||||||||||| |||||| ||||  ||||||||||||| | |||| | | || | |||||||||||||||| |||||| | ||| ||||||    
T  45099432 agggtgtccaatcgtgacacaattttgggaaattgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgaatcgtac 45099531  T
Q  487 gcatcaaccgtgtcacgatt-tggcaaaacgtgacacgtttttga 530  Q
    ||||||| |||| |||||||  || ||||||||||||| ||||||    
T  45099532 gcatcaatcgtggcacgattggggaaaaacgtgacacgattttga 45099576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 396 - 530
Target Start/End: Original strand, 10706834 - 10706968
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaac 494  Q
    |||| ||| |||||||||| ||||||||||||||||||||  ||||| | || ||||||| ||||||||||| |||||| | || ||||||| || |||     
T  10706834 caattgtgtcacgattttgggaaaacgtgacacgattttcaaacttgctggatacgttttaaggataaggttggtcgtaccttgggtcgtacacaccaat 10706933  T
Q  495 cgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||| |||| ||||| ||||||||||||| ||||||    
T  10706934 cgtgccacggtttgg-aaaacgtgacacgattttga 10706968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 530
Target Start/End: Complemental strand, 33118650 - 33118516
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    |||||||| |||| ||||  ||||||||||||| |||||| ||||| | | ||| |||||| ||||||||| | |||| | || |||||||||| ||| |    
T  33118650 caatcgtgtcacgtttttaggaaaacgtgacacaattttcaacttgctgggcacattttcaagataaggttggccgtaccttgggtcgtacgcaccaatc 33118551  T
Q  496 gtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||||||||||||  |||| ||||||| ||||||    
T  33118550 gtgtcacgatttggacaaacatgacacgattttga 33118516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 287 - 434
Target Start/End: Original strand, 17863771 - 17863916
Alignment:
Q  287 tgttgtgtatgccttcaaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttg 386  Q
    ||||||||||| ||||||  ||||||| ||| |||   ||||||||||||||||||||  | | |||  ||||||||  ||| || ||||||||| |||     
T  17863771 tgttgtgtatgtcttcaactttgtgaagttgagaatg-ttggaatcgtgacacgattttggcatcgtcgcacgatttt-caaggcagtgagcatggtttt 17863868  T
Q  387 cagggtatccaatcgtgacacgattttgagaaaacgtgacacgatttt 434  Q
    |||||| |||||||||||||  |||||| |||||||||||||||||||    
T  17863869 cagggtgtccaatcgtgacataattttgggaaaacgtgacacgatttt 17863916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 370
Target Start/End: Original strand, 28446416 - 28446466
Alignment:
Q  320 aaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatg 370  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  28446416 aaaacttggaatcgtgacacgatttgtgaagcgtgtcacaattttgcaatg 28446466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 529
Target Start/End: Complemental strand, 35447659 - 35447451
Alignment:
Q  319 gaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaa 418  Q
    |||||||||||||| ||||| ||||    |||||||||| |||||  | | || ||||||||  ||| |||||| | |||| || ||||||||||| |||    
T  35447659 gaaaacttggaatcatgacatgattacgcaagcgtgtcatgatttt-ctaggcagtgagcattgttttcagggtgttcaattgtaacacgattttgggaa 35447561  T
Q  419 aacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtg 518  Q
    || ||||||||||| |||  ||||  | || ||||||| |||||||||  ||||| | || |||||||||| ||| |||||||||| |||| ||| ||||    
T  35447560 aatgtgacacgattatcggtttgtcgggcaagttttcaagataaggttgctcgtaccttgggtcgtacgcaccaaacgtgtcacga-ttgggaaatcgtg 35447462  T
Q  519 acacgtttttg 529  Q
    ||||| |||||    
T  35447461 acacgattttg 35447451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 407
Target Start/End: Complemental strand, 17057846 - 17057725
Alignment:
Q  287 tgttgtgtatgccttcaaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcg-caatgccgtgagcatgtttt 385  Q
    |||||||||||||||||||||||||| | || | ||    | ||||||||||| ||||   |||||||||||| ||| | ||||| || |||||||||||    
T  17057846 tgttgtgtatgccttcaaaattgtgattgtgaggaacagagaaatcgtgacacaatttcataagcgtgtcacgtttttggcaatgtcgagagcatgtttt 17057747  T
Q  386 gcagggtatccaatcgtgacac 407  Q
    ||||||| ||||||||||||||    
T  17057746 gcagggtgtccaatcgtgacac 17057725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 407
Target Start/End: Complemental strand, 17085829 - 17085708
Alignment:
Q  287 tgttgtgtatgccttcaaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcg-caatgccgtgagcatgtttt 385  Q
    |||||||||||||||||||||||||| | || | ||    | ||||||||||| ||||   |||||||||||| ||| | ||||| || |||||||||||    
T  17085829 tgttgtgtatgccttcaaaattgtgattgtgaggaacagagaaatcgtgacacaatttcataagcgtgtcacgtttttggcaatgtcgagagcatgtttt 17085730  T
Q  386 gcagggtatccaatcgtgacac 407  Q
    ||||||| ||||||||||||||    
T  17085729 gcagggtgtccaatcgtgacac 17085708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 473
Target Start/End: Complemental strand, 6595486 - 6595399
Alignment:
Q  387 cagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgac-acgttttcaggataaggttagtcgta 473  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||||| | |||| | | | |  |||||||||||||||||||||||    
T  6595486 cagggtgtccaatcgtgacacaattttgggaaaacgtgacacgatttttggcttgctgggctagattttcaggataaggttagtcgta 6595399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 399 - 531
Target Start/End: Original strand, 8389732 - 8389866
Alignment:
Q  399 tcgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacacgtttt-caggataaggttagtcgtatcatgagtcgtacgcatcaaccg 496  Q
    ||||| |||||||||| |||||||||||||||||||| | |||| |    ||||||| |||||||||||| | |||| | || |||||||||| ||| |     
T  8389732 tcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgctgagtacgtttttcaggataaggttggacgtaccttgggtcgtacgcaccaatca 8389831  T
Q  497 tgtcacgatttggcaaaacgtgacacgtttttgat 531  Q
    ||||| ||||||| ||||| ||||||| |||||||    
T  8389832 tgtcatgatttggaaaaacatgacacgattttgat 8389866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 332 - 434
Target Start/End: Original strand, 45726429 - 45726530
Alignment:
Q  332 cgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgat 431  Q
    ||||||||||||||  || |||||||||||||  | | || ||||||||| ||| |||||| |||||| |||||||||||||| | ||| ||||||||||    
T  45726429 cgtgacacgatttggcaaccgtgtcacgatttt-ctaggcagtgagcatgattttcagggtgtccaattgtgacacgattttgggcaaatgtgacacgat 45726527  T
Q  432 ttt 434  Q
    |||    
T  45726528 ttt 45726530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 523
Target Start/End: Complemental strand, 5723712 - 5723608
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatt-tggcaaaacgtg 518  Q
    |||||||||||||| | |||| | |||| | |||||||||||||||| |||||| | || |||||||||||||| |||| |||||||  || ||||||||    
T  5723712 cgtgacacgatttttggcttgctggacaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtg 5723613  T
Q  519 acacg 523  Q
    |||||    
T  5723612 acacg 5723608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 17865693 - 17865589
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaac 494  Q
    ||||| || |||||||||| ||||| |||||||||||||| | |||| | |  ||||||||||||||||||| |||||| | || |||||||||| |||     
T  17865693 caatcatgtcacgattttgggaaaatgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaat 17865594  T
Q  495 cgtgt 499  Q
    |||||    
T  17865593 cgtgt 17865589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 435
Target Start/End: Original strand, 30832986 - 30833069
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttc 435  Q
    |||| ||||||||||  ||||||||||| || ||||||||||  | |||||||||||||| ||| |||| |||||||||||||||    
T  30832986 cgtgacacgatttcgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttc 30833069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 435
Target Start/End: Complemental strand, 25410223 - 25410118
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| |||||||| |  |||||||||| ||| ||||||||||  | |||||||||||||| ||| |||| ||||||||    
T  25410223 aatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgag-atggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacac 25410125  T
Q  429 gattttc 435  Q
    |||||||    
T  25410124 gattttc 25410118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 451 - 523
Target Start/End: Complemental strand, 2334844 - 2334771
Alignment:
Q  451 ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt-ggcaaaacgtgacacg 523  Q
    |||||||||||||||| |||||| | || ||||||| |||||| |||| |||||||| || |||||||||||||    
T  2334844 ttttcaggataaggttggtcgtaccttgggtcgtacacatcaatcgtgacacgatttgggaaaaacgtgacacg 2334771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 498
Target Start/End: Complemental strand, 40015420 - 40015319
Alignment:
Q  397 aatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccg 496  Q
    ||||||||||  |||||||| || |||||||||||||| | | || |||||||||||||| ||||| ||| |||||| | ||  ||||| ||||||| ||    
T  40015420 aatcgtgacataattttgagcaatcgtgacacgatttttggcatgattgacacgttttcatgataatgttggtcgtaccttggatcgtaagcatcaatcg 40015321  T
Q  497 tg 498  Q
    ||    
T  40015320 tg 40015319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 363
Target Start/End: Original strand, 15903468 - 15903499
Alignment:
Q  332 cgtgacacgatttgtgaagcgtgtcacgattt 363  Q
    ||||||||||||||||||||||||||||||||    
T  15903468 cgtgacacgatttgtgaagcgtgtcacgattt 15903499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 415
Target Start/End: Original strand, 38312025 - 38312060
Alignment:
Q  380 tgttttgcagggtatccaatcgtgacacgattttga 415  Q
    ||||||||||||| ||||||||||||||||||||||    
T  38312025 tgttttgcagggtgtccaatcgtgacacgattttga 38312060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 433
Target Start/End: Original strand, 6266339 - 6266420
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattt 433  Q
    |||| ||| ||||||  ||||||||||| || ||||||||||  | ||||||||||||||| || |||| |||||||||||||    
T  6266339 cgtgacacaatttcgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 6266420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 28153123 - 28153089
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  28153123 aaattgtgtgagctctagccactagactacttgac 28153089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 43896002 - 43896036
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  43896002 aaattgtgtgagctctagccactagactacttgac 43896036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 3287037 - 3287004
Alignment:
Q  5 aattgtgtgagctctagccactcgactacttgac 38  Q
    |||||||||||||||||||||| |||||||||||    
T  3287037 aattgtgtgagctctagccactagactacttgac 3287004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 432
Target Start/End: Complemental strand, 3492312 - 3492232
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgatt 432  Q
    |||| |||||||| |  ||||||||||| || ||||||||||  | |||||||||||||| ||| |||| ||||||||||||    
T  3492312 cgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgatt 3492232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 37063602 - 37063635
Alignment:
Q  5 aattgtgtgagctctagccactcgactacttgac 38  Q
    |||||||||||||||||||||| |||||||||||    
T  37063602 aattgtgtgagctctagccactagactacttgac 37063635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 451 - 530
Target Start/End: Complemental strand, 4503559 - 4503479
Alignment:
Q  451 ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatt-tggcaaaacgtgacacgtttttga 530  Q
    |||||||||||||||| |||||| | ||  |||||||||||||  ||| |||||||  || ||||||||||||| ||||||    
T  4503559 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaattgtggcacgattggggaaaaacgtgacacgattttga 4503479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 329 - 433
Target Start/End: Original strand, 32289191 - 32289294
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| |||||||| |  ||||||||||| || ||||||||||  | |||| ||||||||| ||||| || ||||||||    
T  32289191 aatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcttgacacgatcttgaggaatcgtgacac 32289289  T
Q  429 gattt 433  Q
    |||||    
T  32289290 gattt 32289294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 5e-54; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 287 - 530
Target Start/End: Original strand, 5429258 - 5429500
Alignment:
Q  287 tgttgtgtatgccttcaaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttg 386  Q
    |||||| |||||||||||| || ||| |||||  |||||||||||| ||||||||||||  |||||||||||||||| ||||||  | ||||||||||||    
T  5429258 tgttgtttatgccttcaaatttttga-tttggagaaacttggaatcatgacacgatttggtaagcgtgtcacgattttgcaatgttgagagcatgttttg 5429356  T
Q  387 cagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtac 486  Q
    |||||| || |||||||||||||||||| |||||||||| |||||||||  |||||| |||| ||||||||| |||| || |||||| | || |||||||    
T  5429357 cagggtgtctaatcgtgacacgattttgggaaaacgtgatacgattttcagcttgttggacaagttttcaggttaagattggtcgtaccttgggtcgtac 5429456  T
Q  487 gcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||| ||| ||||||||||| ||| ||||| ||||||| ||||||    
T  5429457 gcaccaatcgtgtcacgatgtgggaaaacatgacacgattttga 5429500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 329 - 529
Target Start/End: Original strand, 6655357 - 6655557
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||||||   | |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | ||| |||||||    
T  6655357 aatcgtgacacgatttcataggcgtgtcacgattttgcaatgccgtgagcatgttttgcagggtgtccaatcgtgacacgattttggggaaatgtgacac 6655456  T
Q  429 gattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttttt 528  Q
    ||||||||  ||| | | || ||||||||||||||||| ||||||   || |||||||||| ||| ||||||||||||||| ||| ||||||||| ||||    
T  6655457 gattttcggtttgctgggcaagttttcaggataaggttggtcgtacattgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacgatttt 6655556  T
Q  529 g 529  Q
    |    
T  6655557 g 6655557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 329 - 530
Target Start/End: Original strand, 3909716 - 3909916
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    |||||||||||||||| |||||| ||||||||||| |||||| ||||||||||||||||| ||| || |||||||||||||||||  |||||| ||||||    
T  3909716 aatcgtgacacgatttttgaagcatgtcacgattttgcaatgtcgtgagcatgttttgcacggtgtcaaatcgtgacacgatttttggaaaacatgacac 3909815  T
Q  429 gattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttttt 528  Q
     ||||| | | |||||| |||||||| | ||||||||| |||||| | |||||||||||||||||||||||||||||||   ||||||||||| | ||||    
T  3909816 tatttttggcatgtttggcacgtttt-aagataaggttggtcgtaccttgagtcgtacgcatcaaccgtgtcacgattttagaaaacgtgacatgatttt 3909914  T
Q  529 ga 530  Q
    ||    
T  3909915 ga 3909916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 318 - 530
Target Start/End: Original strand, 37740235 - 37740446
Alignment:
Q  318 ggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgaga 417  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||| | || || | ||||||| |||||  |||||||| ||||||||||| ||    
T  37740235 ggaaaacttggaatcgtgacacgatttctgaagcgtgtcacgattttgcaacgtcgagaac-tgttttgtagggtgcccaatcgtaacacgattttggga 37740333  T
Q  418 aaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgt 517  Q
    |||||||||| |||||||| ||||   | || ||||||||||||||||| |||||| | || ||||||| || |||  |||||||||||||| |||||||    
T  37740334 aaacgtgacatgattttcggcttgcagggcaagttttcaggataaggttggtcgtaccttgggtcgtacacaccaaatgtgtcacgatttgggaaaacgt 37740433  T
Q  518 gacacgtttttga 530  Q
    |||||| ||||||    
T  37740434 gacacgattttga 37740446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 318 - 507
Target Start/End: Complemental strand, 46570303 - 46570115
Alignment:
Q  318 ggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgaga 417  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| | |||| || |||| |||| ||||||||  |||||||||||| ||||||| ||    
T  46570303 ggaaaacttggaaccgtgacacgatttgtgaagcgtgtcacgattttgaaatgtcgagagc-tgttctgcagggtgcccaatcgtgacaagattttggga 46570205  T
Q  418 aaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    ||||||||||| ||||||| |||| | | ||  |||||||||||||||| ||||||   || |||||||||||||| |||||||||||||    
T  46570204 aaacgtgacacaattttcggcttgctgggcaaattttcaggataaggttggtcgtactttgggtcgtacgcatcaaacgtgtcacgattt 46570115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 522
Target Start/End: Complemental strand, 9928051 - 9927817
Alignment:
Q  287 tgttgtgtatgccttcaaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttg 386  Q
    ||||||||||| ||||||| ||||||| ||| |||   |  |||||||||||| ||||   |||||| |||||||||  | | || |||| |||||||||    
T  9928051 tgttgtgtatgtcttcaaatttgtgaagttgagaatgataagaatcgtgacacaatttaacaagcgtatcacgatttt-ctaggcagtgaacatgttttg 9927953  T
Q  387 cagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtac 486  Q
    |||||| | ||||||||||||||||||| ||||| ||||||||||||||| |||| | |||| ||||||||||||||||| |||||  | || |||||||    
T  9927952 cagggtgttcaatcgtgacacgattttgggaaaatgtgacacgattttcggcttgctggacaagttttcaggataaggttggtcgttccttgggtcgtac 9927853  T
Q  487 gcatcaaccgtgtcacgatttggcaaaacgtgacac 522  Q
    ||| ||| ||||||||||||||| ||||||||||||    
T  9927852 gcaccaaacgtgtcacgatttgggaaaacgtgacac 9927817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 315 - 473
Target Start/End: Complemental strand, 26176186 - 26176029
Alignment:
Q  315 ttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttg 414  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||| |||||| || |||| |||||||||||||  |||| |||||||| ||||||    
T  26176186 ttgggaaaactttgaatcgtgacacaatttgtgaagcgtgtcacgattttgcaatgtcgagagc-tgttttgcagggtgcccaaccgtgacacaattttg 26176088  T
Q  415 agaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgta 473  Q
     ||||||||||||||||||||| |||| | | || ||||||||||||||||| ||||||    
T  26176087 ggaaaacgtgacacgattttcggcttgatgggcaagttttcaggataaggttggtcgta 26176029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 396 - 529
Target Start/End: Complemental strand, 27417651 - 27417518
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||| | |||| ||||||||||||||| |||||| | || ||||||||||||||||    
T  27417651 caatcgtgacacgattttgggaaaacgtgacacgattttcaacttgttcggcacggtttcaggataaggttggtcgtaccttgggtcgtacgcatcaacc 27417552  T
Q  496 gtgtcacgatttggcaaaacgtgacacgtttttg 529  Q
    |||||||||||||| ||| ||||||||| |||||    
T  27417551 gtgtcacgatttgggaaatcgtgacacgattttg 27417518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 318 - 473
Target Start/End: Original strand, 2209111 - 2209265
Alignment:
Q  318 ggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgaga 417  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||| || |||| |||||||||| ||  |||||||||||||||||||| |     
T  2209111 ggaaaacttggaatcgtgacacgatttttgaagcgtgtcacgattttgcaatgtcgagagc-tgttttgcagagtgcccaatcgtgacacgattttgggg 2209209  T
Q  418 aaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgta 473  Q
    |||||||||||||||||||  ||| | | || ||||||||||||||||| ||||||    
T  2209210 aaacgtgacacgattttcggtttgctaggcaagttttcaggataaggttggtcgta 2209265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 332 - 507
Target Start/End: Original strand, 54882444 - 54882619
Alignment:
Q  332 cgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgat 431  Q
    ||||||||||||||  || | |||||||||||   || || ||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  54882444 cgtgacacgatttggcaatcatgtcacgatttttgaaggcagtgagcatggtttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgat 54882543  T
Q  432 tttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    ||||| |||||| ||||||||||||||||||||||  ||||| | || |||||||||| |||| ||| ||| ||||    
T  54882544 tttcggcttgttggacacgttttcaggataaggttgatcgtaccttgggtcgtacgcaccaactgtgacacaattt 54882619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 328 - 530
Target Start/End: Complemental strand, 34570954 - 34570762
Alignment:
Q  328 gaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    |||||||||||||||||   ||||||||||||||||  ||| ||||  |||||||||||||          |||||||||||||||| ||||||||||||    
T  34570954 gaatcgtgacacgatttagcaagcgtgtcacgattttccaacgccgaaagcatgttttgca----------tcgtgacacgattttgggaaaacgtgaca 34570865  T
Q  428 cgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttt 527  Q
    ||||||||| |||| | |||| ||||||||||||||||| || ||| | || |||||||||| ||| ||||||||||||||| ||||||||||||| |||    
T  34570864 cgattttcggcttgctggacaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattt 34570765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 396 - 529
Target Start/End: Original strand, 41639033 - 41639166
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||||| | |||||||||||||||||||| |||||| | || |||||||||||||||     
T  41639033 caatcgtgacacgattttggaaaaacgtgacacgattttcaacttgttgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcatcaact 41639132  T
Q  496 gtgtcacgatttggcaaaacgtgacacgtttttg 529  Q
    |||||||||||||| ||| | ||||||| |||||    
T  41639133 gtgtcacgatttgggaaaccatgacacgattttg 41639166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 396 - 530
Target Start/End: Original strand, 36314812 - 36314946
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    |||||||| |||||||||| |||||||||||||||||||| ||||| | | |||||||||||||||||||| |||||| | || |||||||||| ||| |    
T  36314812 caatcgtgtcacgattttgggaaaacgtgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatc 36314911  T
Q  496 gtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||||||||||||  |||||||||||| ||||||    
T  36314912 gtgtcacgatttggacaaacgtgacacgattttga 36314946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 396 - 530
Target Start/End: Original strand, 36329021 - 36329155
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    |||||||| |||||||||| |||||||||||||||||||| ||||| | | |||||||||||||||||||| |||||| | || |||||||||| ||| |    
T  36329021 caatcgtgtcacgattttgggaaaacgtgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatc 36329120  T
Q  496 gtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||||||||||||  |||||||||||| ||||||    
T  36329121 gtgtcacgatttggacaaacgtgacacgattttga 36329155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 332 - 522
Target Start/End: Complemental strand, 50674609 - 50674420
Alignment:
Q  332 cgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgat 431  Q
    |||||||||||||| | | ||||||||||||| |  |||||||||||||||||||  | || ||||||||||  ||||||||| |||||||||||| |||    
T  50674609 cgtgacacgatttgggtaacgtgtcacgattttggcatgccgtgagcatgttttgt-gagtgtccaatcgtgttacgattttgggaaaacgtgacatgat 50674511  T
Q  432 tttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacac 522  Q
    ||||  |||| | | |||||||||||||||||||| || ||| | || |||||||||| ||| ||||||||||||||| ||| | ||||||    
T  50674510 tttcagcttgctgggcacgttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcatgacac 50674420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 329 - 523
Target Start/End: Complemental strand, 5148259 - 5148066
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||||||    | |||| |||||||| |||||| |||||||  |||| |||||||  ||||||||| |||||||||| |||||| ||||||    
T  5148259 aatcgtgacacgattttatcaccgtgacacgattttgcaatgtcgtgagctagttt-gcagggtgaccaatcgtggcacgattttgtgaaaacttgacac 5148161  T
Q  429 gattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacg 523  Q
    ||||||| | |||  | || ||||||||||||||||||| |||||| | || |||||||||| ||| ||||||||||||| |||||||||||||||    
T  5148160 gattttcaaacttactggatacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt-gcaaaacgtgacacg 5148066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 396 - 530
Target Start/End: Original strand, 25861614 - 25861749
Alignment:
Q  396 caatcgtgacacgattttgagaaaa-cgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaac 494  Q
    |||||||| |||||||||| ||||| ||||||||||||||| ||||| | | || ||||||||||||||||| |||||| | || ||||||||||||||     
T  25861614 caatcgtgtcacgattttgggaaaaacgtgacacgattttcaacttgctgggcatgttttcaggataaggttggtcgtaccttgggtcgtacgcatcaat 25861713  T
Q  495 cgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||||||||||||||  |||||||||||| ||||||    
T  25861714 cgtgtcacgatttggacaaacgtgacacgattttga 25861749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 396 - 528
Target Start/End: Original strand, 5268781 - 5268914
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaac 494  Q
    |||||||| |||||||||| |||||||||||||||||||| | |||||| |  ||||||||||||||||||| |||||| | || |||||||||| |||     
T  5268781 caatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaat 5268880  T
Q  495 cgtgtcacgatttggcaaaacgtgacacgttttt 528  Q
    |||||||||||||||  |||||||||||| ||||    
T  5268881 cgtgtcacgatttggacaaacgtgacacgatttt 5268914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 329 - 522
Target Start/End: Original strand, 6742931 - 6743123
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||||||    | ||||||||||||| |||| | || |||| |||||| ||||||  | ||||||| |||| ||||| |||||||||||||    
T  6742931 aatcgtgacacgatttcatcaacgtgtcacgattttgcaacgtcgagagc-tgtttttcagggtgcctaatcgtggcacgtttttgggaaaacgtgacac 6743029  T
Q  429 gattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacac 522  Q
    ||||||  ||||||| | |||||||||||||||||||| |||||| | || | ||||||||  || ||||||||||||||| ||||| ||||||    
T  6743030 gattttaaacttgttgggcacgttttcaggataaggttggtcgtaccttgggacgtacgcactaatcgtgtcacgatttgggaaaacttgacac 6743123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 287 - 507
Target Start/End: Complemental strand, 12746006 - 12745787
Alignment:
Q  287 tgttgtgtatgccttcaaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttg 386  Q
    ||||||||||| ||||||| ||||||| ||| |||   |  |||||||||||||||||   ||||||| ||||||||  | | || |||||| ||||| |    
T  12746006 tgttgtgtatgtcttcaaatttgtgaagttgagaatgataagaatcgtgacacgatttagcaagcgtgacacgatttt-ctaggcagtgagc-tgtttgg 12745909  T
Q  387 cagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgtttt-caggataaggttagtcgtatcatgagtcgta 485  Q
    |||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||| | | || ||||| |||||||||||| |||||| | || ||||||    
T  12745908 cagggtgtccaatcgtgacatgattttgggaaaacgtgacacgattttcggcttgctgggcaagttttccaggataaggttggtcgtaccttgggtcgta 12745809  T
Q  486 cgcatcaaccgtgtcacgattt 507  Q
    |||  ||| |||||||||||||    
T  12745808 cgcgccaatcgtgtcacgattt 12745787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 388 - 529
Target Start/End: Original strand, 26363725 - 26363866
Alignment:
Q  388 agggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacg 487  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| |   || ||||||||||||||||| ||| || | || ||||||||    
T  26363725 agggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgagcaagttttcaggataaggttggtcataccttgggtcgtacg 26363824  T
Q  488 catcaaccgtgtcacgatttggcaaaacgtgacacgtttttg 529  Q
    || ||| |||||||| |||||| ||| ||||||||| |||||    
T  26363825 caccaaacgtgtcacaatttgggaaatcgtgacacgattttg 26363866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 397 - 530
Target Start/End: Original strand, 8689079 - 8689212
Alignment:
Q  397 aatcgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    |||||||||||||||||| ||||||||||||||||||||  ||||| | |  ||||||||||||||||||| |||||| | || |||||||||| ||| |    
T  8689079 aatcgtgacacgattttgggaaaacgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatc 8689178  T
Q  496 gtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||| |||||||||| ||||||||||||| ||||||    
T  8689179 gtgccacgatttgg-aaaacgtgacacgattttga 8689212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 368 - 529
Target Start/End: Original strand, 40630425 - 40630585
Alignment:
Q  368 atgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggtta 467  Q
    |||||||||||||||||||  | || |||||||||| |||||||||| ||||||||||||||||||||  |||| | | ||| ||||||| ||||||||     
T  40630425 atgccgtgagcatgttttgt-gagtgtccaatcgtgtcacgattttgggaaaacgtgacacgattttcagcttgctaggcacattttcagaataaggttg 40630523  T
Q  468 gtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttg 529  Q
    |||||| | || ||| || ||| ||| ||||||||||||||| ||| ||||||||| |||||    
T  40630524 gtcgtaccttgggtcatatgcaccaaacgtgtcacgatttgggaaatcgtgacacgattttg 40630585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 373 - 530
Target Start/End: Original strand, 16628430 - 16628588
Alignment:
Q  373 gtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacacgtttt-caggataaggttagtc 470  Q
    ||||||||| ||||||||||   |||||||| |||||||||| |||||||||||||||||||| | |||| |||  || |||| || ||||||||| |||    
T  16628430 gtgagcatgctttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgcttgttacttttttcatgataaggttggtc 16628529  T
Q  471 gtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||| | || |||||||||| ||| ||||||||||||||| ||||||||||||| ||||||    
T  16628530 gtaccttgggtcgtacgcaccaatcgtgtcacgatttgg-aaaacgtgacacgattttga 16628588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 396 - 530
Target Start/End: Complemental strand, 54867694 - 54867560
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    |||||||| ||| |||||| |||||||||||||||||||| ||||| | | ||||||||  |||||||||| |||||| | ||  ||||||||| ||| |    
T  54867694 caatcgtgtcacaattttgggaaaacgtgacacgattttcaacttgctgggcacgtttttcggataaggttggtcgtaccttggatcgtacgcaccaatc 54867595  T
Q  496 gtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||||||||||||  |||||||||||| ||||||    
T  54867594 gtgtcacgatttggacaaacgtgacacgattttga 54867560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 351 - 528
Target Start/End: Complemental strand, 5143821 - 5143644
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcaggg-tatccaatcgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgaca 448  Q
    |||| |||||||| |||||| ||||||| || ||||||||| |  ||||||||| |||||||||| ||||| ||||||||||||||  ||||||| |  |    
T  5143821 cgtgacacgattttgcaatgtcgtgagc-tggtttgcaggggtgaccaatcgtggcacgattttgtgaaaatgtgacacgattttcaaacttgttgggta 5143723  T
Q  449 cgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttttt 528  Q
    |||||||||||||||||| |||| | | || || || |||| ||| ||||||||||||||| ||||||||||||| ||||    
T  5143722 cgttttcaggataaggttggtcgcaccttgggttgtgcgcaccaatcgtgtcacgatttgg-aaaacgtgacacgatttt 5143644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 332 - 515
Target Start/End: Original strand, 36994183 - 36994365
Alignment:
Q  332 cgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgat 431  Q
    ||||||| |||||| | | ||||||| ||||| |  ||| |||||||||||||| | | || |||||||||||||| |||||  ||||||||| ||| ||    
T  36994183 cgtgacatgatttgggtaacgtgtcatgattttggcatgtcgtgagcatgtttt-ctgagtgtccaatcgtgacacaatttttggaaaacgtgtcacaat 36994281  T
Q  432 tttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaac 515  Q
    ||||| |||| | | |||||||||  |||||||||  ||||| | |  |||||||||| |||||||||||||||||||||||||    
T  36994282 tttcggcttgctaggcacgttttctagataaggttgatcgtaccttaggtcgtacgcaccaaccgtgtcacgatttggcaaaac 36994365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 505
Target Start/End: Complemental strand, 52095909 - 52095733
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcg-caatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    |||||||||||||||||  |||||||||| ||||| | ||||| |  |||  |||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  52095909 aatcgtgacacgatttggcaagcgtgtcatgattttggcaatgtcaagagt-tgtttt-cagggtgtccaatcgtgacacgattttgggaaaacgtgaca 52095812  T
Q  428 cgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgat 505  Q
    ||||||| | |||| | | || | |||||||||||||||| |||||| | || |||||| ||||||| |||| ||||||    
T  52095811 cgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtaagcatcaatcgtgacacgat 52095733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 394 - 519
Target Start/End: Original strand, 35661905 - 35662018
Alignment:
Q  394 tccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaa 493  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||| |||||| | ||||||||||||||||||||             |||||||||| |||    
T  35661905 tccaatcgtgacacgattttgggaaaatgtgtcacgattttcggcttgttgggcacgttttcaggataaggtt------------ggtcgtacgcaccaa 35661992  T
Q  494 ccgtgtcacgatttggcaaaacgtga 519  Q
    ||||||||||||||||||||||||||    
T  35661993 ccgtgtcacgatttggcaaaacgtga 35662018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 396 - 530
Target Start/End: Original strand, 16622874 - 16623009
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaa 493  Q
    |||| ||| ||| |||||| ||||||||||||||||||||  ||||| | |  ||| |||||||||||||||| |||||| | || |||||||||| |||    
T  16622874 caattgtgtcacaattttgggaaaacgtgacacgattttcaaacttgctaggtacgtttttcaggataaggttggtcgtaccttgggtcgtacgcaccaa 16622973  T
Q  494 ccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
     ||||||||||||||| ||||||||||||| ||||||    
T  16622974 tcgtgtcacgatttgg-aaaacgtgacacgattttga 16623009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 421 - 530
Target Start/End: Original strand, 29254205 - 29254314
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgac 520  Q
    ||||||| |||||||| |||||| | || || ||||| |||||||| |||||||  ||  ||||||||| ||| ||||||||||||||| ||||||||||    
T  29254205 cgtgacatgattttcggcttgttgggcaagtattcagaataaggttggtcgtattttggatcgtacgcaccaaacgtgtcacgatttggaaaaacgtgac 29254304  T
Q  521 acgtttttga 530  Q
    ||| ||||||    
T  29254305 acgattttga 29254314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 375 - 530
Target Start/End: Complemental strand, 3778085 - 3777930
Alignment:
Q  375 gagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgacacgttttcaggataaggttagtcgta 473  Q
    ||||||| ||||||||||   |||||||| |||||||||| ||||||||||||||||||||  | ||| | |  ||||||||| ||||||||| ||||||    
T  3778085 gagcatggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaatttgctcggtacgttttcaagataaggttggtcgta 3777986  T
Q  474 tcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
     | || |||||||||| ||| |||| |||| ||||| ||||| ||||| | ||||||    
T  3777985 ccttgggtcgtacgcaccaatcgtgccacgttttgg-aaaacttgacatgattttga 3777930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 287 - 473
Target Start/End: Complemental strand, 12740128 - 12739943
Alignment:
Q  287 tgttgtgtatgccttcaaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttg 386  Q
    ||||||||||||||||||| ||||||| ||| |||   |  |||||||||||||||||   || |||||||||||||  | | ||  ||||| |||||||    
T  12740128 tgttgtgtatgccttcaaatttgtgaagttgagaatgataagaatcgtgacacgatttagcaaacgtgtcacgatttt-ctaggcactgagc-tgttttg 12740031  T
Q  387 cagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgta 473  Q
    |||||| ||||| || |||||||||||| |||||||| |||| ||||| | |||| | | || | |||||||||||||||| ||||||    
T  12740030 cagggtgtccaaccgcgacacgattttgggaaaacgtaacacaatttttggcttgctgggcaagtttttcaggataaggttggtcgta 12739943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 287 - 473
Target Start/End: Complemental strand, 12748334 - 12748149
Alignment:
Q  287 tgttgtgtatgccttcaaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttg 386  Q
    ||||||||||||||||||| ||||||| ||| |||   |  |||||||||||||||||   || |||||||||||||  | | ||  ||||| |||||||    
T  12748334 tgttgtgtatgccttcaaatttgtgaagttgagaatgataagaatcgtgacacgatttagcaaacgtgtcacgatttt-ctaggcactgagc-tgttttg 12748237  T
Q  387 cagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgta 473  Q
    |||||| ||||| || |||||||||||| |||||||| |||| ||||| | |||| | | || | |||||||||||||||| ||||||    
T  12748236 cagggtgtccaaccgcgacacgattttgggaaaacgtaacacaatttttggcttgctgggcaagtttttcaggataaggttggtcgta 12748149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 421 - 531
Target Start/End: Complemental strand, 54200363 - 54200253
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgac 520  Q
    |||||||||||||||| |||| | | || ||||||| ||||||||| |||||| | || |||||||||| ||| |  |||||||||||| |||| |||||    
T  54200363 cgtgacacgattttcggcttgctgggcaagttttcaagataaggttggtcgtaccttgggtcgtacgcaccaaactagtcacgatttgggaaaatgtgac 54200264  T
Q  521 acgtttttgat 531  Q
    ||| |||||||    
T  54200263 acgattttgat 54200253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 507
Target Start/End: Original strand, 5396272 - 5396384
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaac 494  Q
    |||||||| ||||||||||  |||||||||||||||||||  ||||||| |  | |||||||||||||||||  ||||| | || |||||||||| |||     
T  5396272 caatcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgttgggtatgttttcaggataaggttgatcgtaccttgggtcgtacgcaccaat 5396371  T
Q  495 cgtgtcacgattt 507  Q
    |||| ||||||||    
T  5396372 cgtgccacgattt 5396384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 329 - 435
Target Start/End: Complemental strand, 13992836 - 13992731
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| ||||||||||  ||| ||||||| || ||||||||||  | |||||||||||||||||| |||| ||||||||    
T  13992836 aatcgtgacacgaatttggcatcgtgacacgatttcgtgatgtcgtgagc-tggtttgcagggtgccaaatcgtgacacgattttgggaaatcgtgacac 13992738  T
Q  429 gattttc 435  Q
    |||||||    
T  13992737 gattttc 13992731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 401 - 523
Target Start/End: Original strand, 24968801 - 24968923
Alignment:
Q  401 gtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtc 500  Q
    |||||||||||||| | || ||||||||||| ||   | || |||||||||||||||||||||||| ||||||   || ||||||||| |||| |||| |    
T  24968801 gtgacacgattttgtgcaatcgtgacacgatatttagcatgcttgacacgttttcaggataaggttggtcgtacattgggtcgtacgcttcaatcgtgac 24968900  T
Q  501 acgatttggcaaaacgtgacacg 523  Q
    | ||||| || || |||||||||    
T  24968901 atgattttgccaatcgtgacacg 24968923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 433
Target Start/End: Complemental strand, 31495859 - 31495756
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| ||||||||||  ||||||||||| || ||||||||||  | ||||||||||||||| || |||| ||||||||    
T  31495859 aatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacac 31495761  T
Q  429 gattt 433  Q
    |||||    
T  31495760 gattt 31495756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 473
Target Start/End: Complemental strand, 56179109 - 56179029
Alignment:
Q  394 tccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgta 473  Q
    ||||||||||||||||||||| |||||||||||| |||||| | |||| | | || | |||||||||||||||| ||||||    
T  56179109 tccaatcgtgacacgattttgggaaaacgtgacatgatttttggcttgctgggcaagattttcaggataaggttggtcgta 56179029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 379 - 434
Target Start/End: Complemental strand, 5370575 - 5370520
Alignment:
Q  379 atgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgatttt 434  Q
    ||||||| |||||  ||||||||||||||||||||| |||| ||||||||||||||    
T  5370575 atgtttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttt 5370520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 529
Target Start/End: Complemental strand, 50263383 - 50263265
Alignment:
Q  410 ttttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttgg 509  Q
    ||||| |||||||| |||||||||||| |||| | |  | |||||||| |||||||| |||||| | || |||||||||| |||  |||||||| |||||    
T  50263383 ttttgggaaaacgtaacacgattttcggcttggtgggtaagttttcagaataaggttggtcgtaccttg-gtcgtacgcaccaaatgtgtcacggtttgg 50263285  T
Q  510 caaaacgtgacacgtttttg 529  Q
     ||| ||||||||| |||||    
T  50263284 gaaatcgtgacacgattttg 50263265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 329 - 413
Target Start/End: Complemental strand, 54200434 - 54200350
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgc-aatgccgtgagcatgttttgcagggtatccaatcgtgacacgatttt 413  Q
    ||||||||||||||||   | |||||||||||||| |  |||| || |||| ||||||||||||| ||||||||||||||||||||    
T  54200434 aatcgtgacacgatttcataggcgtgtcacgattttggtaatgtcgagagc-tgttttgcagggtgtccaatcgtgacacgatttt 54200350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 523
Target Start/End: Complemental strand, 52083115 - 52083011
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt-ggcaaaacgtg 518  Q
    |||||||||||||| | |||||| | || | |||||||||||||||| ||| || | || |||||| ||||||| |||| |||||||| || ||||||||    
T  52083115 cgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcataccttgggtcgtaagcatcaatcgtgacacgatttgggaaaaacgtg 52083016  T
Q  519 acacg 523  Q
    |||||    
T  52083015 acacg 52083011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 523
Target Start/End: Complemental strand, 52094122 - 52094018
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt-ggcaaaacgtg 518  Q
    |||||||||||||| | |||||| | || | |||||||||||||||| ||| || | || |||||| ||||||| |||| |||||||| || ||||||||    
T  52094122 cgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcataccttgggtcgtaagcatcaatcgtgacacgatttgggaaaaacgtg 52094023  T
Q  519 acacg 523  Q
    |||||    
T  52094022 acacg 52094018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 265
Target Start/End: Complemental strand, 17976790 - 17976751
Alignment:
Q  226 tttatagaaatattataagttgtttttataagctcttcca 265  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  17976790 tttatagacatattataagttgtttttataaactcttcca 17976751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 530
Target Start/End: Complemental strand, 10047807 - 10047757
Alignment:
Q  480 gtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||||||||| ||| |||||||||||||||  |||||||||||| ||||||    
T  10047807 gtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttga 10047757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 10417202 - 10417168
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  10417202 aaattgtgtgagctctagccactagactacttgac 10417168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 13264255 - 13264221
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  13264255 aaattgtgtgagctctagccactagactacttgac 13264221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 39696319 - 39696285
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  39696319 aaattgtgtgagctctagccactagactacttgac 39696285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 55021643 - 55021677
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  55021643 aaattgtgtgagctctagccactagactacttgac 55021677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 47934052 - 47934019
Alignment:
Q  5 aattgtgtgagctctagccactcgactacttgac 38  Q
    |||||||||||||||||||||| |||||||||||    
T  47934052 aattgtgtgagctctagccactagactacttgac 47934019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 278
Target Start/End: Original strand, 9680719 - 9680779
Alignment:
Q  218 gaaaacaatttatagaaatattataagttgtttttataagctcttccatacaaccttacaa 278  Q
    |||||||| |||| || |||| ||||| |||||||||| |||||||||||||  |||||||    
T  9680719 gaaaacaacttatggacatatcataagctgtttttatatgctcttccatacagtcttacaa 9680779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 2e-50; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 305 - 522
Target Start/End: Complemental strand, 23410903 - 23410686
Alignment:
Q  305 aattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtga 404  Q
    |||||||||  | |||||||||| ||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||    
T  23410903 aattgtgaagataggaaaacttgaaatcgtgacacaatttgtgaagcgtgtcacgatttcgcaatgtcgagagcatgttttgcagggtgtccaatcgtga 23410804  T
Q  405 cacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacga 504  Q
    ||| ||||||  |||||||| ||| |||||    ||| |||| ||||||||| |||||| || |||||| | || || || | || ||||||||||||||    
T  23410803 cacaattttggaaaaacgtgtcacaatttttatgttgcttgatacgttttcaagataagtttggtcgtaccttgggttgttcacaccaaccgtgtcacga 23410704  T
Q  505 tttggcaaaacgtgacac 522  Q
    ||||||||||||||||||    
T  23410703 tttggcaaaacgtgacac 23410686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 304 - 530
Target Start/End: Complemental strand, 5237031 - 5236805
Alignment:
Q  304 aaattgtgaatttgggaaaacttggaa-tcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgt 402  Q
    |||||||||| ||||||||||   ||| ||||||||||||||   |||||||||||||||| || |||||| ||||||||||| | | || |||||||||    
T  5237031 aaattgtgaagttgggaaaacagagaaatcgtgacacgatttcataagcgtgtcacgatttggctatgccgagagcatgtttt-ctgagtgtccaatcgt 5236933  T
Q  403 gacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcac 502  Q
    ||||| |||||| ||||||||||||||||||||| |||| | |  | |||||||||||||| || |||||| | || |||||||||| ||| ||||||||    
T  5236932 gacacaattttgggaaaacgtgacacgattttcggcttgctgggaaagttttcaggataagtttggtcgtaccttgggtcgtacgcaccaaacgtgtcac 5236833  T
Q  503 gatttggcaaaacgtgacacgtttttga 530  Q
    ||||||||||||||||||||| ||||||    
T  5236832 gatttggcaaaacgtgacacgattttga 5236805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 329 - 507
Target Start/End: Complemental strand, 49200218 - 49200040
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||||||   | |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| | |||||||||||    
T  49200218 aatcgtgacacgattttacaggcgtgtcacgattttgcaatgccgtgagcatgttttgcagggtgtccaatcgtgacacgatgttggggaaacgtgacac 49200119  T
Q  429 gattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    |||||||| |||| | | || ||||||||||||||||| |||||| | || |||||||||| |||  ||||||||||||    
T  49200118 gattttcggcttgctgggcatgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaatgtgtcacgattt 49200040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 328 - 530
Target Start/End: Original strand, 29812681 - 29812883
Alignment:
Q  328 gaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatg-ttttgcagggtatccaatcgtgacacgattttgagaaaacgtgac 426  Q
    |||||||||||||||||   ||| ||||||||||||  | | || ||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||    
T  29812681 gaatcgtgacacgatttagcaagtgtgtcacgatttt-ctaggcagtgagcatggttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgac 29812779  T
Q  427 acgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttt 526  Q
    |||||||| | |||| | | || ||||||||||||||||| |||||| | || |||||||||| ||| ||||||||||||||| ||||||||||||| ||    
T  29812780 acgatttttgtcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacgatt 29812879  T
Q  527 ttga 530  Q
    ||||    
T  29812880 ttga 29812883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 328 - 507
Target Start/End: Original strand, 34490633 - 34490811
Alignment:
Q  328 gaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    ||||| ||||||||||||  || |||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||  |||||||||||    
T  34490633 gaatcatgacacgatttggcaaccgtgtcacgatttcgcaatgtcgagag-atgttttgcagggtatccaatcgtgacacgattttggaaaaacgtgaca 34490731  T
Q  428 cgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    ||||||||| ||| || | || ||||||||||||||||| || ||| | || |||||||||| ||| |||||||||||||    
T  34490732 cgattttcggcttattgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 34490811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 351 - 518
Target Start/End: Complemental strand, 44331974 - 44331807
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg 450  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||  |||||||||||||||||| | |||  | |  |||    
T  44331974 cgtgtcacgatttcgcaatgccgtgagtatgttttgcagggtgtccaatcgtgacacgattttggaaaaacgtgacacgatttttggcttcctgggtacg 44331875  T
Q  451 ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtg 518  Q
    |||||| ||||| |||||||||| | || ||||||| || |||  ||||||||||||||  |||||||    
T  44331874 ttttcaagataaagttagtcgtaccttgggtcgtacacaccaaatgtgtcacgatttggggaaacgtg 44331807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 328 - 509
Target Start/End: Original strand, 46173135 - 46173314
Alignment:
Q  328 gaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    ||||||||||| || |||  || | |||||||||||| ||| || ||||||||| |||||||||| ||||||||||||||||||||| |||||| |||||    
T  46173135 gaatcgtgacatgaattggcaaacatgtcacgatttc-caaggcagtgagcatggtttgcagggtgtccaatcgtgacacgattttgggaaaacatgaca 46173233  T
Q  428 cgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttgg 509  Q
    ||| || || |||||| | |||||||||||||||||||| |||||| | || |||||||||| |||||||||||||| ||||    
T  46173234 cga-ttccggcttgttgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgaattgg 46173314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 374 - 529
Target Start/End: Complemental strand, 6096322 - 6096167
Alignment:
Q  374 tgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgta 473  Q
    |||||||| |||||||||| |||||| |||||||||||||| ||||||||||||||||||||| ||| || ||||  |||||||||||||||| ||||||    
T  6096322 tgagcatggtttgcagggtgtccaattgtgacacgattttgggaaaacgtgacacgattttcggcttattggacaaattttcaggataaggttggtcgta 6096223  T
Q  474 tcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttg 529  Q
     | || |||||||||| |||  |||||||||||||| ||| | ||||||| |||||    
T  6096222 ccttgggtcgtacgcaccaaatgtgtcacgatttgggaaatcatgacacgattttg 6096167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 328 - 489
Target Start/End: Original strand, 44331187 - 44331348
Alignment:
Q  328 gaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    ||||||||||||| ||||  || ||||||||||||||||||||  ||||| ||||||||| |||| | ||||||||||||||||||| ||||| ||||||    
T  44331187 gaatcgtgacacgctttggcaaccgtgtcacgatttcgcaatgttgtgagtatgttttgctgggtgttcaatcgtgacacgattttgggaaaaagtgaca 44331286  T
Q  428 cgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgca 489  Q
    ||||||| | |||| | |  ||||||||||||||||||| |||||| | || ||||||||||    
T  44331287 cgatttttggcttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgca 44331348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 396 - 530
Target Start/End: Original strand, 40592353 - 40592487
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    |||||||| |||||||||| |||||||||||||||||||| ||||| | |||||||||||||||||||||| |||||| | ||  |||||| || ||| |    
T  40592353 caatcgtgtcacgattttgggaaaacgtgacacgattttcaacttgctggacacgttttcaggataaggttggtcgtaccttggatcgtacacaccaatc 40592452  T
Q  496 gtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||||||||||||  |||||||||||| ||||||    
T  40592453 gtgtcacgatttggacaaacgtgacacgattttga 40592487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 388 - 529
Target Start/End: Original strand, 4569411 - 4569552
Alignment:
Q  388 agggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacg 487  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||| | | || ||||||||||||||||| |||||| | || ||||||||    
T  4569411 agggtgtccaatcgtgacatgattttgggaaaacgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacg 4569510  T
Q  488 catcaaccgtgtcacgatttggcaaaacgtgacacgtttttg 529  Q
    || ||||||||||||| ||  | ||||||||||||| |||||    
T  4569511 caccaaccgtgtcacggttgtggaaaacgtgacacgattttg 4569552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 328 - 507
Target Start/End: Complemental strand, 31340810 - 31340631
Alignment:
Q  328 gaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaa-cgtgac 426  Q
    ||||||||||||||||||  || |||||||||||||  | | || ||||||||| ||| |||||| ||||||||||||| ||||||| ||||| | ||||    
T  31340810 gaatcgtgacacgatttggcaaccgtgtcacgatttt-ctaggcagtgagcatggttttcagggtgtccaatcgtgacatgattttgggaaaaacatgac 31340712  T
Q  427 acgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    |||||||||| |||||| | || ||||||||||||||||| |||||| | || |||||||||| ||| |||| ||||||||    
T  31340711 acgattttcggcttgttgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgacacgattt 31340631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 373 - 529
Target Start/End: Original strand, 54593149 - 54593305
Alignment:
Q  373 gtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgt 472  Q
    ||||||||| ||| || ||||| |||||||||| | |||||| |||||||||||||||||||| ||||| | | |||||||||||||||||||| |||||    
T  54593149 gtgagcatggttttcatggtattcaatcgtgactcaattttgggaaaacgtgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgt 54593248  T
Q  473 atcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttg 529  Q
    |   || |||||||||| ||| ||||||||||||||| ||| | ||||||| |||||    
T  54593249 acattgggtcgtacgcaccaaacgtgtcacgatttgggaaatcatgacacgattttg 54593305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 396 - 530
Target Start/End: Complemental strand, 8127145 - 8127011
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    |||||||| |||||||||| ||||  |||||||||||||| ||||| | |  ||||||||||||||||||| |||||||| || ||||||| || |||||    
T  8127145 caatcgtgtcacgattttgggaaagtgtgacacgattttcaacttgctaggtacgttttcaggataaggttggtcgtatcttgggtcgtacacaccaacc 8127046  T
Q  496 gtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||||||||||||  |||||||||||| ||||||    
T  8127045 gtgtcacgatttggacaaacgtgacacgattttga 8127011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 381 - 530
Target Start/End: Original strand, 29810539 - 29810688
Alignment:
Q  381 gttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgag 480  Q
    |||||||||||| ||||||||||||||||||||   |||||||  ||| ||||| | |||| | ||||  |||||||||||||||| |||||| | || |    
T  29810539 gttttgcagggtgtccaatcgtgacacgattttagaaaaacgtagcacaatttttggcttgctggacaaattttcaggataaggttggtcgtaccttggg 29810638  T
Q  481 tcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||| ||||||    
T  29810639 tcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttga 29810688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 373 - 530
Target Start/End: Original strand, 30709343 - 30709502
Alignment:
Q  373 gtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgacacg-ttttcaggataaggttagtc 470  Q
    ||||||||| |||||||||| | |||||||| |||||||||||||||||||||||| ||||||  ||||| | |  ||| ||||||||||||| || |||    
T  30709343 gtgagcatggtttgcagggtgttcaatcgtgtcacgattttgagaaaacgtgacacaattttcaaacttgctgggtacgtttttcaggataagattggtc 30709442  T
Q  471 gtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
     || | || |||||||||| ||| ||||||||||||||| ||||||||||||| ||||||    
T  30709443 ttaccttgggtcgtacgcaccaatcgtgtcacgatttggaaaaacgtgacacgattttga 30709502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 396 - 530
Target Start/End: Original strand, 1735876 - 1736009
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    |||||||| |||||||||| |||||||||||||||||||| |||||  |||||| |||| ||||||||||| |||||| | || || ||||||| ||| |    
T  1735876 caatcgtg-cacgattttgggaaaacgtgacacgattttcaacttgaatgacacatttttaggataaggttggtcgtaccttgggttgtacgcaccaatc 1735974  T
Q  496 gtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||||||||||||  |||||||||||| ||||||    
T  1735975 gtgtcacgatttggacaaacgtgacacgattttga 1736009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 329 - 532
Target Start/End: Original strand, 7764071 - 7764275
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacga-tttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    |||||||||||||||||  ||||||||||||| ||| | |||| || |||| |||||| |||||  ||||||||||||||||||||| ||||||||||||    
T  7764071 aatcgtgacacgatttggcaagcgtgtcacgagtttggtaatggcgagagc-tgtttt-cagggcgtccaatcgtgacacgattttgggaaaacgtgaca 7764168  T
Q  428 cgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatt-tggcaaaacgtgacacgtt 525  Q
    ||||||| | |||||| | || | |||| ||||||||||| |||||| | || |||||||||||||| |||| || ||||  || ||||||||||||| |    
T  7764169 cgatttttggcttgttgggcaagatttttaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacatgattggggaaaaacgtgacacgat 7764268  T
Q  526 tttgatg 532  Q
    || ||||    
T  7764269 ttagatg 7764275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 329 - 528
Target Start/End: Complemental strand, 43404501 - 43404301
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttc--gcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgac 426  Q
    ||||||||||||||||   |||| |||||||||||   | | ||||| ||||||||||| | || | | ||||||||||||||||||| | |||||||||    
T  43404501 aatcgtgacacgatttcataagcctgtcacgatttttggtagtgccgagagcatgtttt-ctggatgttcaatcgtgacacgattttggggaaacgtgac 43404403  T
Q  427 acgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttt 526  Q
    |||||||||| |||| |   || ||||||||||||||||  |||||| | || |||||||||| ||| ||||||||||||||| ||| ||||||||| ||    
T  43404402 acgattttcggcttgctgagcaagttttcaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacgatt 43404303  T
Q  527 tt 528  Q
    ||    
T  43404302 tt 43404301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 23392368 - 23392260
Alignment:
Q  325 ttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtg 424  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||  |||| |||| ||||| ||||  ||||||||    
T  23392368 ttggaatcgtgacacgatttgtgaagcgtgtcacgatttcacaatgtcgagagcatgttttgcagggtcaccaaccgtgtcacga-tttggcaaaacgtg 23392270  T
Q  425 acacgatttt 434  Q
    |||| |||||    
T  23392269 acacaatttt 23392260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 373 - 522
Target Start/End: Complemental strand, 55302687 - 55302539
Alignment:
Q  373 gtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgt 472  Q
    ||||||||  ||| |||||| | ||||||||||||||||| | |||||||||| |||||||||| |||| | | || ||||||||||||||||| |||||    
T  55302687 gtgagcattgttttcagggtgttcaatcgtgacacgatttgg-gaaaacgtgatacgattttcggcttgctgggcaagttttcaggataaggttggtcgt 55302589  T
Q  473 atcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacac 522  Q
    | | || |||||||||| ||| ||||||||||||||| ||| ||||||||    
T  55302588 accttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacac 55302539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 373 - 522
Target Start/End: Original strand, 40734159 - 40734310
Alignment:
Q  373 gtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgacac-gttttcaggataaggttagtc 470  Q
    ||||||||| ||||||||||   |||||||| |||||||||| ||||||||||||||||||||  ||||||| |  ||  |||||||||||||||| |||    
T  40734159 gtgagcatggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttggctacatttttcaggataaggttggtc 40734258  T
Q  471 gtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacac 522  Q
    ||| | ||  ||||||||||||| |||||||||||||||  |||||||||||    
T  40734259 gtaccttggatcgtacgcatcaatcgtgtcacgatttggacaaacgtgacac 40734310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 373 - 530
Target Start/End: Original strand, 8370037 - 8370194
Alignment:
Q  373 gtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgacacgttttcaggataaggttagtcg 471  Q
    ||||||||| ||||||||||   |||||||| |||||||||| ||||||||||||||||||||  | ||| | |  ||||||| ||||||||||| ||||    
T  8370037 gtgagcatggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaaattgctgggaacgtttttaggataaggttggtcg 8370136  T
Q  472 tatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    || | || || ||||||| ||| ||||||||||||||| ||||||||||||| ||||||    
T  8370137 taccttgggttgtacgcaccaatcgtgtcacgatttgg-aaaacgtgacacgattttga 8370194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 396 - 529
Target Start/End: Original strand, 40912805 - 40912938
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    ||||||||| || |||||| ||||||||||||||||||||| |||||| | || |||||| |||||||| | |||||||| ||  ||||||||| ||| |    
T  40912805 caatcgtgatacaattttgggaaaacgtgacacgattttcggcttgttgggcaagttttctggataaggctggtcgtatcttggatcgtacgcaccaaac 40912904  T
Q  496 gtgtcacgatttggcaaaacgtgacacgtttttg 529  Q
    |||||||||||||| ||| | ||||||| |||||    
T  40912905 gtgtcacgatttgggaaatcatgacacgattttg 40912938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 396 - 509
Target Start/End: Complemental strand, 43402490 - 43402377
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    |||||||||||||||||||   ||||||||||||||||||| |||| | | || ||||||||||||||||| || ||||| || |||||||||| ||| |    
T  43402490 caatcgtgacacgattttggagaaacgtgacacgattttcggcttgctgggcaagttttcaggataaggttggttgtatcttgggtcgtacgcaccaaac 43402391  T
Q  496 gtgtcacgatttgg 509  Q
    ||||||||||||||    
T  43402390 gtgtcacgatttgg 43402377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 329 - 530
Target Start/End: Original strand, 40735048 - 40735249
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||||||    | |||||||||||||| ||| || ||||||||| ||||||||||   |||||||| |||||||||| |||||||||||||    
T  40735048 aatcgtgacacgatttcatcaacgtgtcacgatttc-caa-gcagtgagcatggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacac 40735145  T
Q  429 gattttc-gacttgtttgacac-gttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttt 526  Q
    |||||||  ||||| | |  ||  |||||||||||||||| |||||| | || |||||||||| ||| ||||| | |||||||  |||||||||||| ||    
T  40735146 gattttcaaacttgctggctacatttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgttatgatttggacaaacgtgacacgatt 40735245  T
Q  527 ttga 530  Q
    ||||    
T  40735246 ttga 40735249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 373 - 530
Target Start/End: Original strand, 47923450 - 47923609
Alignment:
Q  373 gtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgacacg-ttttcaggataaggttagtc 470  Q
    ||||||||| ||||||||||   |||||||| |||  ||||| ||||||||||||||||||||  ||||| | |  ||| |||||||||||||||| |||    
T  47923450 gtgagcatggtttgcagggtgctcaatcgtgtcacatttttgggaaaacgtgacacgattttcaaacttgctgggtacgtttttcaggataaggttggtc 47923549  T
Q  471 gtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||| | || || ||||||||||| |||||||||||||||  |||||||||||| ||||||    
T  47923550 gtaccttgggttgtacgcatcaatcgtgtcacgatttggacaaacgtgacacgattttga 47923609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 373 - 530
Target Start/End: Complemental strand, 16264887 - 16264730
Alignment:
Q  373 gtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgacacgttttcaggataaggttagtcg 471  Q
    ||||||||| ||||||||||   |||||||| |||||||||| ||||||||||||||||||||  ||| | | |  ||||||||||||||||||| ||||    
T  16264887 gtgagcatggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaactagctgggtacgttttcaggataaggttggtcg 16264788  T
Q  472 tatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    || | || || ||||||| ||| |||| |||||||||| ||| ||||||||| ||||||    
T  16264787 taccttgggtggtacgcaccaatcgtgccacgatttgg-aaagcgtgacacgattttga 16264730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 510
Target Start/End: Complemental strand, 35926072 - 35925891
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||||||    | |||||||||||||| ||  || ||||||||| ||||||||||   |||||||| ||||| ||||||||||||||||||    
T  35926072 aatcgtgacacgatttcatcaacgtgtcacgatttcccag-gcagtgagcatggtttgcagggtgctcaatcgtgtcacgagtttgagaaaacgtgacac 35925974  T
Q  429 gattttc-gacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggc 510  Q
    |||||||  ||||||| |  ||||||||||||||||||| ||||||   ||||  ||||||| ||| |||| |||| ||||||    
T  35925973 gattttcaaacttgttgggtacgttttcaggataaggttggtcgtacattgagatgtacgcaccaatcgtgccacgttttggc 35925891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 351 - 528
Target Start/End: Complemental strand, 37726234 - 37726058
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgacac 449  Q
    |||| |||||||| |  ||||||||||| || |||||||||| || |||||||||||||||||| | || |||||||||||||||  ||||||| |  |     
T  37726234 cgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgtcaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgttggttaa 37726136  T
Q  450 gttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttttt 528  Q
    ||||||||||||||||| ||||||   || |||||||| ||||| |||| |||||||||| |||||||| |||| ||||    
T  37726135 gttttcaggataaggttggtcgtacattgggtcgtacgtatcaatcgtgacacgatttgg-aaaacgtggcacgatttt 37726058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 329 - 509
Target Start/End: Original strand, 33386180 - 33386360
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| |||||||| |  ||||||||||| || ||||||||||  | |||||||||||||||||| | || ||||||||    
T  33386180 aatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgattttgtggaatcgtgacac 33386278  T
Q  429 gattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttgg 509  Q
    ||||||| | |||| | |  | ||||||||||||||||| |||||||| || |||||||| ||||| |||| ||||||||||    
T  33386279 gattttcaaacttgctggttaagttttcaggataaggttggtcgtatcttgggtcgtacgtatcaatcgtgacacgatttgg 33386360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 473
Target Start/End: Original strand, 36018253 - 36018407
Alignment:
Q  319 gaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttg-cagggtatccaatcgtgacacgattttgaga 417  Q
    |||||||||||||||||||||||||    ||||||||||||||||  | | || |||||||| ||||  | ||||   ||||||||||||||||||| ||    
T  36018253 gaaaacttggaatcgtgacacgattacgcaagcgtgtcacgatttt-ctaggcagtgagcatattttttctgggtgctcaatcgtgacacgattttggga 36018351  T
Q  418 aaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgta 473  Q
    ||||||||||| ||||||| |||| | | |||||||| ||||||||||| ||||||    
T  36018352 aaacgtgacacaattttcggcttgctgggcacgtttttaggataaggttggtcgta 36018407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 397 - 522
Target Start/End: Complemental strand, 36029608 - 36029482
Alignment:
Q  397 aatcgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    ||||||| ||||||||||  ||||||||||||||||||| | |||| | |  ||||||||||||||||||| |||||| | || |||||||||| ||| |    
T  36029608 aatcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatc 36029509  T
Q  496 gtgtcacgatttggcaaaacgtgacac 522  Q
    |||||||| ||| | ||||||||||||    
T  36029508 gtgtcacggtttagaaaaacgtgacac 36029482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 509
Target Start/End: Complemental strand, 21711783 - 21711603
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    |||||||||||||||| |  | |||||||||||||  ||  || ||||||||| ||| ||||||   |||||||| |||||||||| |||||||||||||    
T  21711783 aatcgtgacacgatttcttcaacgtgtcacgattttccag-gcagtgagcatggttttcagggtgctcaatcgtgtcacgattttgggaaaacgtgacac 21711685  T
Q  429 gattttc-gacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttgg 509  Q
     ||||||  ||||| |    |||||||| |||||||||| |||||| | || |||||||||| ||| |||||||||||||||    
T  21711684 aattttcaaacttgctgagtacgttttccggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttgg 21711603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 473
Target Start/End: Original strand, 51398445 - 51398589
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatg-ttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    |||||| ||||||||||  ||||||||||||||||  | | |  ||||||||| ||||||||||| |||||| |||||||||||||| ||||||||||||    
T  51398445 aatcgtaacacgatttgctaagcgtgtcacgatttt-ctaggtagtgagcatggttttgcagggtgtccaattgtgacacgattttgggaaaacgtgaca 51398543  T
Q  428 cgattttcgacttgtttgacacgttttcaggataaggttagtcgta 473  Q
    | |||||||  ||||| | || ||||| |||||| |||| ||||||    
T  51398544 caattttcggtttgttgggcaagtttttaggatatggttggtcgta 51398589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 394 - 523
Target Start/End: Original strand, 7761948 - 7762078
Alignment:
Q  394 tccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatca 492  Q
    ||||||||||||||||||||| |||| |||||||||||||| | |||| | | || | |||||||||||||||| |||||| | || |||||||||||||    
T  7761948 tccaatcgtgacacgattttgggaaa-cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacgcatca 7762046  T
Q  493 accgtgtcacgatt-tggcaaaacgtgacacg 523  Q
    | |||| |||||||  || |||||||||||||    
T  7762047 atcgtgacacgattggggaaaaacgtgacacg 7762078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 373 - 530
Target Start/End: Complemental strand, 27027245 - 27027087
Alignment:
Q  373 gtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacacgtttt-caggataaggttagtc 470  Q
    ||||||||| ||||||| ||   |||||||| |||||||||| |||||||||||||||||||| | |||| | |  || |||| |||||||||||| |||    
T  27027245 gtgagcatggtttgcagagtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgctggctacatttttcaggataaggttggtc 27027146  T
Q  471 gtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||| | || |||||||||| ||| |||| |||| ||||| ||||||||||||| ||||||    
T  27027145 gtaccttgggtcgtacgcaccaatcgtgccacgttttgg-aaaacgtgacacgattttga 27027087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 408 - 522
Target Start/End: Complemental strand, 40845157 - 40845042
Alignment:
Q  408 gattttgagaaaacgtgacacgattttcgacttgtttgacacgttttc-aggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatt 506  Q
    ||||||| |||||||||||||||||||| || || | ||||||||||  ||||||||||| |||||| | || || ||||||| ||| ||||||||||||    
T  40845157 gattttgggaaaacgtgacacgattttcaacgtgctggacacgttttttaggataaggttggtcgtaccttgggttgtacgcaccaatcgtgtcacgatt 40845058  T
Q  507 tggcaaaacgtgacac 522  Q
    |||  |||||||||||    
T  40845057 tggacaaacgtgacac 40845042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 394 - 530
Target Start/End: Complemental strand, 5258629 - 5258491
Alignment:
Q  394 tccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatca 492  Q
    ||||||||||||||||||||| |||| |||||||||||||| | |||| | | || | |||||||||||||||| |||||| | ||| |||||||||||     
T  5258629 tccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgaatcgtacgcatcg 5258530  T
Q  493 accgtgtcacgatt-tggcaaaacgtgacacgtttttga 530  Q
    |  ||| |||||||  || ||||||||||||| ||||||    
T  5258529 attgtggcacgattggggaaaaacgtgacacgattttga 5258491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 394 - 530
Target Start/End: Complemental strand, 9636613 - 9636475
Alignment:
Q  394 tccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatca 492  Q
    ||||||||||||| ||||||| |||| | |||||||||||| | |||| | |||| | |||||||||||||||| |||||| | ||  ||||||||||||    
T  9636613 tccaatcgtgacatgattttgggaaatcatgacacgatttttggcttgatggacaagattttcaggataaggttggtcgtaccttggatcgtacgcatca 9636514  T
Q  493 accgtgtcacgatt-tggcaaaacgtgacacgtttttga 530  Q
    | |||| |||||||  || ||||||||||||| ||||||    
T  9636513 atcgtggcacgattggggaaaaacgtgacacgattttga 9636475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 351 - 507
Target Start/End: Original strand, 27986003 - 27986159
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacac 449  Q
    |||| |||||||| |  ||||||||||| || ||||||||||  | ||||||||||||||| || | || ||||||||||||||| | |||| | |  |     
T  27986003 cgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgattgtgtggaatcgtgacacgattttcaaacttgctggttaa 27986101  T
Q  450 gttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    ||||||||||||||||| |||||||| || |||||||| ||||| |||| ||||||||    
T  27986102 gttttcaggataaggttggtcgtatcttgggtcgtacgtatcaatcgtgacacgattt 27986159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 329 - 509
Target Start/End: Original strand, 37408079 - 37408258
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    |||||||||||||||   | | |||| |||||||| | | |||||||||| || |||||||||| || ||||||| ||||||| ||  ||| ||||||||    
T  37408079 aatcgtgacacgattgtggcatcgtgacacgattttgtagtgccgtgagc-tggtttgcagggtgtcaaatcgtggcacgattgtgt-aaatcgtgacac 37408176  T
Q  429 gattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttgg 509  Q
    ||||||| | |||||| |  | ||||||||||||||||| |||||| | || |||||||| ||||| |||| ||||||||||    
T  37408177 gattttcaaacttgttggttaagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtggcacgatttgg 37408258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 400 - 528
Target Start/End: Complemental strand, 48438727 - 48438598
Alignment:
Q  400 cgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtg 498  Q
    |||| |||||||||| | |||||||||||||||||| | |||| | |  ||||||||||||||||||| || ||| | ||  ||||||||| ||| ||||    
T  48438727 cgtgtcacgattttggggaaacgtgacacgattttcaaacttgatgggtacgttttcaggataaggttggttgtaccttggatcgtacgcaccaatcgtg 48438628  T
Q  499 tcacgatttggcaaaacgtgacacgttttt 528  Q
    |||||||||||  |||||||||||| ||||    
T  48438627 tcacgatttggacaaacgtgacacgatttt 48438598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 426 - 530
Target Start/End: Original strand, 24694767 - 24694871
Alignment:
Q  426 cacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtt 525  Q
    |||||||||  ||||| | |||||||||||||||||||||| |||||| | || || ||||||| ||| |||||||||||||||  |||||| ||||| |    
T  24694767 cacgatttttaacttgctggacacgttttcaggataaggttggtcgtaccttgggttgtacgcaccaatcgtgtcacgatttggacaaacgtaacacgat 24694866  T
Q  526 tttga 530  Q
    |||||    
T  24694867 tttga 24694871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 396 - 530
Target Start/End: Original strand, 39032126 - 39032260
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaac 494  Q
    |||||||| |||||||||| ||||| |||||||||||||| | |||| | |  ||||||||||||||| ||| |||||| | || |||||||||| |||     
T  39032126 caatcgtgtcacgattttgggaaaatgtgacacgattttcaaacttgctgggtacgttttcaggataaagttggtcgtaccttgggtcgtacgcaccaat 39032225  T
Q  495 cgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||| |||||||| | ||| ||||||||| ||||||    
T  39032226 cgtgccacgattt-gaaaatcgtgacacgattttga 39032260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 394 - 523
Target Start/End: Original strand, 45094847 - 45094978
Alignment:
Q  394 tccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatca 492  Q
    |||||||||||||| |||||| |||| |||||||||||||| | |||||| | || | |||||||||||||||| |||||| | ||   |||||||||||    
T  45094847 tccaatcgtgacacaattttgggaaatcgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcgtaccttggaacgtacgcatca 45094946  T
Q  493 accgtgtcacgatt-tggcaaaacgtgacacg 523  Q
    | |||| |||||||  || |||||||||||||    
T  45094947 atcgtgacacgattggggaaaaacgtgacacg 45094978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 351 - 413
Target Start/End: Original strand, 24694713 - 24694775
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgatttt 413  Q
    ||||||||||||| |||||| ||||||||||||||||||||| |||||||||  |||||||||    
T  24694713 cgtgtcacgattttgcaatgtcgtgagcatgttttgcagggtgtccaatcgtatcacgatttt 24694775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 498
Target Start/End: Complemental strand, 27038580 - 27038454
Alignment:
Q  373 gtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgacacgttttcaggataaggttagtcg 471  Q
    ||||||||| ||||||||||   ||||| || |||||||||| ||||| ||||||||||||||  ||||||| |  | ||||||||||||||||| ||||    
T  27038580 gtgagcatggtttgcagggtgctcaatcatgtcacgattttgggaaaatgtgacacgattttcaaacttgttgggtatgttttcaggataaggttggtcg 27038481  T
Q  472 tatcatgagtcgtacgcatcaaccgtg 498  Q
    || | || |||||||||| ||| ||||    
T  27038480 taccttgggtcgtacgcaccaatcgtg 27038454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 329 - 452
Target Start/End: Original strand, 16498679 - 16498808
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatcc------aatcgtgacacgattttgagaaaacg 422  Q
    |||||||||| |||||   | |||||||||||||| ||||||||| ||||||||||||  |||| | |      |||||||| ||||||||| ||||| |    
T  16498679 aatcgtgacatgatttcataggcgtgtcacgatttggcaatgccgagagcatgttttgatgggtgttcttgttcaatcgtgatacgattttgggaaaatg 16498778  T
Q  423 tgacacgattttcgacttgtttgacacgtt 452  Q
    || ||||||||||| |||| ||||||||||    
T  16498779 tgtcacgattttcggcttgcttgacacgtt 16498808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 507
Target Start/End: Complemental strand, 53921943 - 53921855
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgta--cgcatcaaccgtgtcacgattt 507  Q
    ||||||||||||||  |  ||||||||| ||||||||||||||||| |||||| | |||||||||  |||||||| |||| ||||||||    
T  53921943 cgtgacacgatttttaatatgtttgacaagttttcaggataaggttggtcgtaccttgagtcgtatgcgcatcaatcgtgacacgattt 53921855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 480 - 529
Target Start/End: Original strand, 36018402 - 36018451
Alignment:
Q  480 gtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttg 529  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||| |||||    
T  36018402 gtcgtacgcaccaaccatgtcacgatttgggaaaacgtgacacgattttg 36018451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 433
Target Start/End: Original strand, 800728 - 800831
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| ||||||||||  ||||||||||| || ||||| ||||  | ||||||||||||||| || |||| ||||||||    
T  800728 aatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagc-tggtttgcggggtgccaaatcgtgacacgattgtgggaaatcgtgacac 800826  T
Q  429 gattt 433  Q
    |||||    
T  800827 gattt 800831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 434
Target Start/End: Original strand, 3393290 - 3393330
Alignment:
Q  394 tccaatcgtgacacgattttgagaaaacgtgacacgatttt 434  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  3393290 tccaatcgtgacacgattttgggaaatcgtgacacgatttt 3393330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 522
Target Start/End: Complemental strand, 23392297 - 23392266
Alignment:
Q  491 caaccgtgtcacgatttggcaaaacgtgacac 522  Q
    ||||||||||||||||||||||||||||||||    
T  23392297 caaccgtgtcacgatttggcaaaacgtgacac 23392266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 3894633 - 3894667
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  3894633 aaattgtgtgagctctagccactagactacttgac 3894667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 11820093 - 11820127
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  11820093 aaattgtgtgagctctagccactagactacttgac 11820127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 17729080 - 17729114
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  17729080 aaattgtgtgagctctagccactagactacttgac 17729114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 19030309 - 19030343
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  19030309 aaattgtgtgagctctagccactagactacttgac 19030343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 433
Target Start/End: Complemental strand, 23198465 - 23198384
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattt 433  Q
    |||| |||||||| |  ||||||||||| || ||||||||||  | |||||||||||||||| ||| || |||||||||||||    
T  23198465 cgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatttggaggaatcgtgacacgattt 23198384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 24430238 - 24430272
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  24430238 aaattgtgtgagctctagccactagactacttgac 24430272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 530
Target Start/End: Original strand, 25929023 - 25929101
Alignment:
Q  452 tttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||||||||||||| ||||||   ||  ||||||| | ||||||||| |||||||||| || ||||||||| ||||||    
T  25929023 tttcaggataaggttggtcgtacattggatcgtacgtaccaaccgtgttacgatttggccaatcgtgacacgattttga 25929101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 530
Target Start/End: Original strand, 51398584 - 51398634
Alignment:
Q  480 gtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||||||||| ||| ||||||||||||||| |||| |||||||| ||||||    
T  51398584 gtcgtacgcaccaaacgtgtcacgatttgggaaaatgtgacacgattttga 51398634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 52410222 - 52410188
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  52410222 aaattgtgtgagctctagccactagactacttgac 52410188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 38819304 - 38819271
Alignment:
Q  5 aattgtgtgagctctagccactcgactacttgac 38  Q
    |||||||||||||||||||||| |||||||||||    
T  38819304 aattgtgtgagctctagccactagactacttgac 38819271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 54626431 - 54626464
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttga 37  Q
    ||||||||||||||||||||||| ||||||||||    
T  54626431 aaattgtgtgagctctagccactagactacttga 54626464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 329 - 433
Target Start/End: Complemental strand, 23200686 - 23200583
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| |||||||| |  |||| |||||| || ||||||||||  | |||||||||||||||| ||| || ||||||||    
T  23200686 aatcgtgacacgaatttggcatcgtgacacgattttgtgatgctgtgagc-tggtttgcagggtgccaaatcgtgacacgatttggaggaatcgtgacac 23200588  T
Q  429 gattt 433  Q
    |||||    
T  23200587 gattt 23200583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 101; Significance: 8e-50; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 329 - 529
Target Start/End: Original strand, 10959 - 11159
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||||||   | |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | ||| |||||||    
T  10959 aatcgtgacacgatttcataggcgtgtcacgattttgcaatgccgtgagcatgttttgcagggtgtccaatcgtgacacgattttggggaaatgtgacac 11058  T
Q  429 gattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttttt 528  Q
    ||||||||  ||| | | || ||||||||||||||||| ||||||   || |||||||||| ||| ||||||||||||||| ||| ||||||||| ||||    
T  11059 gattttcggtttgctgggcaagttttcaggataaggttggtcgtacattgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacgatttt 11158  T
Q  529 g 529  Q
    |    
T  11159 g 11159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 5e-48; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 320 - 529
Target Start/End: Complemental strand, 6360687 - 6360479
Alignment:
Q  320 aaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaa 419  Q
    ||||| |||||| |||||||||||||||||||||||| | |||| |||||| || |||| |||||||||||||  ||||| |||||||||||||| | ||    
T  6360687 aaaacctggaatagtgacacgatttgtgaagcgtgtcgcaattttgcaatgtcgagagc-tgttttgcagggtgcccaattgtgacacgattttggggaa 6360589  T
Q  420 acgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtga 519  Q
    ||||||||||||||||| |||||| | || ||||||||||||| ||| |||||||| || |||||||||| ||| ||||||||||||||| |||  ||||    
T  6360588 acgtgacacgattttcggcttgttgggcaagttttcaggataatgttggtcgtatcttgggtcgtacgcaccaaacgtgtcacgatttgggaaattgtga 6360489  T
Q  520 cacgtttttg 529  Q
    |||| |||||    
T  6360488 cacgattttg 6360479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 287 - 530
Target Start/End: Original strand, 27347501 - 27347743
Alignment:
Q  287 tgttgtgtatgccttcaaaattgtgaatttgggaaaacttggaa-tcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagca-tgttt 384  Q
    |||||| |||||||||||| || |||| ||||||||| ||| || |||||||||||||||  ||||||||||||||||  | | || ||||||| |||||    
T  27347501 tgttgtttatgccttcaaa-ttatgaagttgggaaaaattgcaaatcgtgacacgatttgctaagcgtgtcacgatttt-ctaggcagtgagcactgttt 27347598  T
Q  385 tgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgt 484  Q
    ||||||||  |||||||||||||||||||| |||||| ||||| |||||||| |||| | | || ||||||||||||||||| |||||| | || |||||    
T  27347599 tgcagggtgcccaatcgtgacacgattttgggaaaac-tgacatgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgt 27347697  T
Q  485 acgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||| ||| ||||||||| ||||| |||| |||||||| ||||||    
T  27347698 acgcaccaaacgtgtcacggtttgggaaaatgtgacacgattttga 27347743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 287 - 530
Target Start/End: Complemental strand, 14070423 - 14070181
Alignment:
Q  287 tgttgtgtatgccttcaaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttg 386  Q
    ||||||||||| ||||||| ||||||| ||| |||   ||| ||||||||||||||||  | | |||| ||||||||  ||| || ||||||||| |||     
T  14070423 tgttgtgtatgtcttcaaatttgtgaagttgagaatggttg-aatcgtgacacgattttggcatcgtggcacgatttt-caaggcagtgagcatggtttt 14070326  T
Q  387 cagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgta 485  Q
    |||||| | ||||||||||||||||||| |||||||||||||||||||||||||| | | || | |||||| ||||||||| |||||| | || ||||||    
T  14070325 cagggtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgctaggcaagtttttcaagataaggttggtcgtaccttgggtcgta 14070226  T
Q  486 cgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
     ||| ||| ||||||||||||||| ||||||||||||| ||||||    
T  14070225 tgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttga 14070181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 287 - 530
Target Start/End: Complemental strand, 14380451 - 14380209
Alignment:
Q  287 tgttgtgtatgccttcaaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttg 386  Q
    ||||||||||| ||||||| ||||||| ||| |||   ||| ||||||||||||||||  | | |||| ||||||||  ||| || ||||||||| |||     
T  14380451 tgttgtgtatgtcttcaaatttgtgaagttgagaatggttg-aatcgtgacacgattttggcatcgtggcacgatttt-caaggcagtgagcatggtttt 14380354  T
Q  387 cagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgta 485  Q
    |||||| | ||||||||||||||||||| |||||||||||||||||||||||||| | | || | |||||| ||||||||| |||||| | || ||||||    
T  14380353 cagggtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgctaggcaagtttttcaagataaggttggtcgtaccttgggtcgta 14380254  T
Q  486 cgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
     ||| ||| ||||||||||||||| ||||||||||||| ||||||    
T  14380253 tgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttga 14380209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 348 - 522
Target Start/End: Complemental strand, 47676666 - 47676492
Alignment:
Q  348 aagcgtgtcacgatttcgcaatgccgtgagcatg-ttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttga 446  Q
    ||||||||||||||||  | | || ||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| | |     
T  47676666 aagcgtgtcacgatttt-ctaggcagtgagcatggttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctggg 47676568  T
Q  447 cacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacac 522  Q
    || ||||||||||||||||| |||||| | || |||||||||| ||| ||||||||||||| | ||||||||||||    
T  47676567 caagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattttggaaaacgtgacac 47676492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 287 - 530
Target Start/End: Original strand, 26416891 - 26417133
Alignment:
Q  287 tgttgtgtatgccttcaaaattgtgaatttgggaaaacttggaa-tcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgtttt 385  Q
    |||||| |||| ||||||| ||||||| ||||||||||   ||| ||||||||||||||   |||||||||||||||| |  |||||| |||||||||||    
T  26416891 tgttgtttatggcttcaaa-ttgtgaagttgggaaaacagagaaatcgtgacacgatttcataagcgtgtcacgatttggttatgccgagagcatgtttt 26416989  T
Q  386 gcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgta 485  Q
     | | || |||||| |||||||||||||| | ||| |||||||||||||    ||||| |||| ||||||||| ||||||| |||||| | || ||||||    
T  26416990 -ctgagtgtccaattgtgacacgattttggggaaatgtgacacgatttttagtttgttggacaagttttcagggtaaggttggtcgtaccttgggtcgta 26417088  T
Q  486 cgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||| |||||||||||||||||||| || ||||||||| ||||||    
T  26417089 cgcaccaaccgtgtcacgatttggccaatcgtgacacgattttga 26417133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 328 - 530
Target Start/End: Complemental strand, 47674493 - 47674291
Alignment:
Q  328 gaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatg-ttttgcagggtatccaatcgtgacacgattttgagaaaacgtgac 426  Q
    |||||||||||||||||   |||| |||||||||||  ||  || ||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||    
T  47674493 gaatcgtgacacgatttagcaagcatgtcacgattttccag-gcagtgagcatggttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgac 47674395  T
Q  427 acgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttt 526  Q
    |||||||||| |||| | | || ||||||||||||||||| |||||| | || || ||||||| ||| ||||||||||||| | ||||| ||||| | ||    
T  47674394 acgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggttgtacgcaccaaacgtgtcacgattttggaaaacatgacatgatt 47674295  T
Q  527 ttga 530  Q
    ||||    
T  47674294 ttga 47674291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 329 - 530
Target Start/End: Original strand, 6570212 - 6570413
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||||||||| | ||||||||||||| |||  |||||||||||| |||   | |  |||||| ||||||| |||||  | || ||||||||    
T  6570212 aatcgtgacacgatttgtggaccgtgtcacgattttgcagggccgtgagcatggttttttgagggtccaattgtgacacaattttaggcaatcgtgacac 6570311  T
Q  429 gattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttttt 528  Q
    |||||| | | || |||||||||||| |||||||||||  ||||| | || ||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  6570312 gatttttggcatgcttgacacgtttttaggataaggttgatcgtaccttgggtcatacgcatcaaccgtgtcacgatttggccaatcgtgacacgttttt 6570411  T
Q  529 ga 530  Q
    ||    
T  6570412 ga 6570413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 318 - 441
Target Start/End: Complemental strand, 48600055 - 48599933
Alignment:
Q  318 ggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgaga 417  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||| |||||||||||||   |||||||||||||||| || |     
T  48600055 ggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgattttgcaatgtcgagagc-tgttttgcagggtgcacaatcgtgacacgattatgggg 48599957  T
Q  418 aaacgtgacacgattttcgacttg 441  Q
    ||||||||||||||||||| ||||    
T  48599956 aaacgtgacacgattttcggcttg 48599933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 318 - 473
Target Start/End: Original strand, 29608143 - 29608298
Alignment:
Q  318 ggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacga-ttttgag 416  Q
    ||||||||| ||||||||| ||||||||||||| |||||||||||| |||||| || |||| | ||||||||||| |||||||||||||||| ||||| |    
T  29608143 ggaaaactttgaatcgtgatacgatttgtgaagtgtgtcacgattttgcaatgtcgagagc-tattttgcagggtgtccaatcgtgacacgatttttggg 29608241  T
Q  417 aaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgta 473  Q
     ||| |||| || |||||||||||||| | || ||||||||||||||||| ||||||    
T  29608242 gaaaagtgatacaattttcgacttgttgggcaagttttcaggataaggttggtcgta 29608298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 287 - 530
Target Start/End: Original strand, 4585739 - 4585981
Alignment:
Q  287 tgttgtgtatgccttcaaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttg 386  Q
    ||||||||||| ||||||| ||||||| ||| |||   |  |||| ||||||| ||||   ||| ||||||||||||  | | || ||||||||||||||    
T  4585739 tgttgtgtatgtcttcaaatttgtgaagttgagaatgataagaattgtgacactatttagcaagtgtgtcacgatttt-ctaggcagtgagcatgttttg 4585837  T
Q  387 cagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtac 486  Q
    |||||| |||||||||||||| |||||| |||||||||||| |||||| | |||||| |  | |||||||  |||||||| |||||| | || |||||||    
T  4585838 cagggtgtccaatcgtgacactattttgggaaaacgtgacaagatttttggcttgttgggtaagttttcaatataaggttggtcgtaccttgggtcgtac 4585937  T
Q  487 gcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||| ||| | ||||||||||||| |||| |||||||| ||||||    
T  4585938 gcaccaaacatgtcacgatttgggaaaatgtgacacgattttga 4585981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 285 - 530
Target Start/End: Complemental strand, 4539143 - 4538899
Alignment:
Q  285 tgtgttgtgtatgccttcaaaattgtgaatttgggaaaac-ttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgtt 383  Q
    |||||||| ||||||||| |||||||||| ||||||| ||   | ||||||||||||||||   | |||||||||||||| |||||| ||  ||  ||||    
T  4539143 tgtgttgtttatgccttc-aaattgtgaagttgggaatacagagaaatcgtgacacgatttcataggcgtgtcacgattttgcaatgtcgatag-ttgtt 4539046  T
Q  384 ttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcg 483  Q
    ||| |||||  | |||||||||||||||||| |||||||||||||||||||||  ||| |   || |||||||||| |||||| |||||| | ||  |||    
T  4539045 ttgaagggtgcctaatcgtgacacgattttgggaaaacgtgacacgattttcggtttgctaagcaagttttcaggacaaggttggtcgtaccttggatcg 4538946  T
Q  484 tacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||||| ||| ||||||||||||||||||||  ||||||| ||||||    
T  4538945 tacgcaccaaacgtgtcacgatttggcaaaatatgacacgattttga 4538899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 329 - 530
Target Start/End: Complemental strand, 21983824 - 21983624
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||||||    | |||| |||||||| |||||| ||||||| || ||||||||||  ||||||| | || ||||||| |||||||||||||    
T  21983824 aatcgtgacacgatttcatcatcgtgacacgattttgcaatgtcgtgagc-tggtttgcagggtgaccaatcgcggcatgattttgtgaaaacgtgacac 21983726  T
Q  429 gattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttt 527  Q
    ||||||| | |||||| |  ||||||||||||||||||| |||||| | || |||||||||| |||  |||||||||||||| ||||||||||||| |||    
T  21983725 gattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaattgtgtcacgatttgg-aaaacgtgacacgattt 21983627  T
Q  528 tga 530  Q
    |||    
T  21983626 tga 21983624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 332 - 530
Target Start/End: Original strand, 48489053 - 48489250
Alignment:
Q  332 cgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgat 431  Q
    ||||||||| ||||  || ||||||| |||||||||||| ||||||| ||||||||||||| | ||| ||||||||||||| | |||||||||||||| |    
T  48489053 cgtgacacgttttggcaaccgtgtcatgatttcgcaatgtcgtgagc-tgttttgcagggtgttcaaccgtgacacgatttagggaaaacgtgacacggt 48489151  T
Q  432 tttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||| | |||| | | || | || |||||||||||| ||| || | || || ||||||| ||| ||||||||||||||||||||||||||| | ||||||    
T  48489152 ttttggcttgctgggcatgcttccaggataaggttggtcataccttgggttgtacgcaccaatcgtgtcacgatttggcaaaacgtgacatgattttga 48489250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 381 - 530
Target Start/End: Original strand, 18126316 - 18126464
Alignment:
Q  381 gttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgag 480  Q
    |||||||||||| |||||||||| ||||||||||  ||||||||| |||||||||| |||||| | || ||||||||||||| ||| |||||| | || |    
T  18126316 gttttgcagggtgtccaatcgtg-cacgattttggaaaaacgtgatacgattttcggcttgttgggcaagttttcaggataatgttggtcgtaccttggg 18126414  T
Q  481 tcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||||||| ||| ||||||||||||||  ||||||||||||| ||||||    
T  18126415 tcgtacgcaccaaacgtgtcacgatttgagaaaacgtgacacgattttga 18126464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 329 - 530
Target Start/End: Original strand, 23554659 - 23554861
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgc-aatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    |||||||| || |||||  |||||||||||||||| |  |||| || |||| |||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  23554659 aatcgtgatacaatttggcaagcgtgtcacgattttggtaatgtcgagagc-tgtttt-cagggtgtccaatcgtgacacgattttgggaaaacgtgaca 23554756  T
Q  428 cgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatt--tggcaaaacgtgacacgt 524  Q
    |||||||||||||| | | || | |||||||||||||||| ||||||   || |||||||||||||| |||| |||||||  ||| |||||||||||||     
T  23554757 cgattttcgacttgctgggcaagtttttcaggataaggttggtcgtacattgggtcgtacgcatcaatcgtgacacgattaatgg-aaaacgtgacacga 23554855  T
Q  525 ttttga 530  Q
    ||||||    
T  23554856 ttttga 23554861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 397 - 530
Target Start/End: Original strand, 2647280 - 2647413
Alignment:
Q  397 aatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccg 496  Q
    ||||||| |||||||||| |||||||||||| ||||||| ||||| | | |||||||||||||||||||| |||||| | || |||||||||| ||| ||    
T  2647280 aatcgtgtcacgattttgggaaaacgtgacatgattttcaacttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcg 2647379  T
Q  497 tgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||||||||||||  |||||||| ||| ||||||    
T  2647380 tgtcacgatttggacaaacgtgatacgattttga 2647413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 373 - 529
Target Start/End: Complemental strand, 32358559 - 32358403
Alignment:
Q  373 gtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgt 472  Q
    ||||||||| ||| |||||||||||||||||| ||||||||| ||||||||||||| ||||||  |||| | | |||||||||||||||| |||  ||||    
T  32358559 gtgagcatggttttcagggtatccaatcgtgatacgattttgggaaaacgtgacacaattttcagcttgctgggcacgttttcaggataaagttgatcgt 32358460  T
Q  473 atcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttg 529  Q
    | | ||  ||||||||| ||| ||||||| ||||||| |||  |||||||| |||||    
T  32358459 accttggatcgtacgcaccaaacgtgtcatgatttggaaaattgtgacacgattttg 32358403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 328 - 507
Target Start/End: Original strand, 43863879 - 43864058
Alignment:
Q  328 gaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaa-tgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgac 426  Q
    ||||||||||||||||||  ||||||||||| |||| |  | ||||  ||||||||||| | | || ||||||||||||||||||||| |||||||||||    
T  43863879 gaatcgtgacacgatttggaaagcgtgtcaccattttggtagtgcccagagcatgttttcc-gagtgtccaatcgtgacacgattttgggaaaacgtgac 43863977  T
Q  427 acgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    ||||||||||  ||||| |  | ||||||||||||||||| |||||| | || |||||||||| ||| |||| ||| ||||    
T  43863978 acgattttcggtttgttaggaaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgacacaattt 43864058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 413
Target Start/End: Complemental strand, 2761840 - 2761746
Alignment:
Q  318 ggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgatttt 413  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| || |||| |||||||||||||  |||||||||||||||||||    
T  2761840 ggaaaacttggaatcgtgacccgatttgtgaagcatgtcacgattttgcaatgtcgagagc-tgttttgcagggtgcccaatcgtgacacgatttt 2761746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 373 - 507
Target Start/End: Original strand, 2389737 - 2389871
Alignment:
Q  373 gtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgt 472  Q
    ||||||||| |||  ||||| ||||||||||||||||||||||||||| ||||||||||||||  |||| | |  ||||||||||||||||||| |||||    
T  2389737 gtgagcatggtttttagggtgtccaatcgtgacacgattttgagaaaatgtgacacgattttcagcttgctgggaacgttttcaggataaggttggtcgt 2389836  T
Q  473 atcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    | | ||  |||||| || ||| |||||||||||||    
T  2389837 accttggatcgtacacaccaaacgtgtcacgattt 2389871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 421 - 531
Target Start/End: Original strand, 48491289 - 48491399
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgac 520  Q
    |||||||||||||||| |||||| | |||| ||||| ||| ||||| |||||| | || |||||||||| ||||||||||||||||||||||||||||||    
T  48491289 cgtgacacgattttcggcttgttgggcacgctttcaagattaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttggcaaaacgtgac 48491388  T
Q  521 acgtttttgat 531  Q
    | | |||||||    
T  48491389 atgattttgat 48491399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 328 - 413
Target Start/End: Original strand, 48491218 - 48491302
Alignment:
Q  328 gaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgatttt 413  Q
    ||||||||||||||||||  || |||||||||| ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  48491218 gaatcgtgacacgatttggcaaccgtgtcacgaattcgcaatgtcgtgagc-tgttttgcagggtgtccaatcgtgacacgatttt 48491302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 333 - 528
Target Start/End: Complemental strand, 2479913 - 2479719
Alignment:
Q  333 gtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgatt 432  Q
    ||||||||||||  | | |||| ||||||||   |||||||||||| || |||||||||| || ||||||| |||||||||| |||| ||| ||||||||    
T  2479913 gtgacacgattttggcatcgtgacacgattttctaatgccgtgagc-tggtttgcagggtgtcaaatcgtgtcacgattttgtgaaatcgttacacgatt 2479815  T
Q  433 ttc-gacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttttt 528  Q
    |||  ||||||| |  | ||||||||||||||||| |||||| | || |||||||||||||| | || || ||||||| |||||||| |||| ||||    
T  2479814 ttcaaacttgttggttaagttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcatggcatgatttgg-aaaacgtggcacgatttt 2479719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 380 - 531
Target Start/End: Original strand, 4796235 - 4796386
Alignment:
Q  380 tgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatga 479  Q
    |||||||||||||   |||||||||||||||||||  ||||||||||||||||||| ||||| | | |||||||||||||||  ||| |||||| | ||     
T  4796235 tgttttgcagggtgctcaatcgtgacacgattttggaaaaacgtgacacgattttcaacttgatgggcacgttttcaggatagagttggtcgtaccttgg 4796334  T
Q  480 gtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttgat 531  Q
     ||||||||| |||  || |||| |||| |  |||||||||||| |||||||    
T  4796335 atcgtacgcaccaaatgtatcacaatttagacaaacgtgacacgattttgat 4796386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 394 - 530
Target Start/End: Original strand, 4178458 - 4178596
Alignment:
Q  394 tccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatca 492  Q
    ||||||||||||||||||||| |||| |||||||||||||| | |||||| | || | |||||||||||||||| |||||| | ||  ||||||||||||    
T  4178458 tccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgttaggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatca 4178557  T
Q  493 accgtgtcacgatt-tggcaaaacgtgacacgtttttga 530  Q
    | |||| || ||||  || ||||||||||||| ||||||    
T  4178558 atcgtggcaagattggggaaaaacgtgacacgattttga 4178596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 396 - 530
Target Start/End: Original strand, 33332032 - 33332166
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    |||| ||| ||||||||||  ||||||||||||||||||| ||||| | | ||| |||||| ||||||||| |||||| | || |||||||||| ||| |    
T  33332032 caattgtgtcacgattttggaaaaacgtgacacgattttcaacttgctgggcacattttcaagataaggttggtcgtaccttgggtcgtacgcaccaatc 33332131  T
Q  496 gtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||||||||||||  ||  |||||||| ||||||    
T  33332132 gtgtcacgatttggacaattgtgacacgattttga 33332166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 421 - 530
Target Start/End: Complemental strand, 2761759 - 2761650
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgac 520  Q
    |||||||||||||||  |||| | | || |||||||||||||| || |||||| | || |||||||||| ||| ||||||||||||||| ||||||||||    
T  2761759 cgtgacacgattttcagcttgctgggcaagttttcaggataagattggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgac 2761660  T
Q  521 acgtttttga 530  Q
    ||| ||||||    
T  2761659 acgattttga 2761650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 523
Target Start/End: Original strand, 19495590 - 19495785
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    |||||||||||||||||  |||| ||||||  ||| | |||| || |||| |||||| |||||| |||||||||||||| |||||| ||||||||| |||    
T  19495590 aatcgtgacacgatttggcaagcatgtcacattttggtaatgtcgagagc-tgtttt-cagggtgtccaatcgtgacacaattttgggaaaacgtgccac 19495687  T
Q  429 ga-ttttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgat-ttggcaaaacgtgacacg 523  Q
    || |||| | |||| | | || | |||||||||||||||| |||||| | || |||||||||||||| |||| |||||| | || |||||||||||||    
T  19495688 gattttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgatctgggaaaaacgtgacacg 19495785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 329 - 413
Target Start/End: Original strand, 1113296 - 1113380
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgatttt 413  Q
    ||||||||||||||||   |||||||||||||||||||||||||   ||||| ||||||| ||| ||||||||||||||||||||    
T  1113296 aatcgtgacacgatttagcaagcgtgtcacgatttcgcaatgccaatagcatattttgcatggtgtccaatcgtgacacgatttt 1113380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 351 - 530
Target Start/End: Complemental strand, 21989466 - 21989289
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacac 449  Q
    |||| |||||||| |||||| ||||||| || |||||||||   ||||||||| |||||||||| |||| ||||||||||||||| | |||| | |  ||    
T  21989466 cgtgacacgattttgcaatgtcgtgagc-tggtttgcagggcgaccaatcgtggcacgattttgtgaaa-cgtgacacgattttccaacttgatgggtac 21989369  T
Q  450 gttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||||||||||||||||  ||||| | || ||| |||||| ||| ||||||| ||||||| |||| |||||||| ||||||    
T  21989368 gttttcaggataaggttgatcgtaccttgggtcatacgcagcaatcgtgtcatgatttgg-aaaatgtgacacgattttga 21989289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 329 - 528
Target Start/End: Complemental strand, 47264224 - 47264026
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||||||  | | |||| |||||||| | |||| ||||||| || |||| ||||| || ||||||| ||| ||| || |||| ||||||||    
T  47264224 aatcgtgacacgattttggcatcgtgacacgattttgtaatgtcgtgagc-tggtttgtagggtgtcaaatcgtggcacaattgtgtgaaatcgtgacac 47264126  T
Q  429 gattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttt 527  Q
    ||||||| | |||| | |  | ||||||||||||||||| |||||||| || |||||||| ||||| | || |||||||||| |||||||| |||| |||    
T  47264125 gattttcaaacttgctggttaagttttcaggataaggttggtcgtatcttgggtcgtacgtatcaatcttgacacgatttgg-aaaacgtggcacgattt 47264027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 421 - 530
Target Start/End: Original strand, 1113367 - 1113476
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgac 520  Q
    |||||||||||||||| | || | | ||  |||||||||||||||| |||||| | || |||||||||| ||| |||||||||  |||||||||||||||    
T  1113367 cgtgacacgattttcggcctgatgggcaaattttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgtattggcaaaacgtgac 1113466  T
Q  521 acgtttttga 530  Q
    ||| ||||||    
T  1113467 acgattttga 1113476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 421 - 530
Target Start/End: Original strand, 46515915 - 46516024
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgac 520  Q
    |||| ||||||||| | |||||| | |||||||||||||||||||| |||  | | || |||||| ||| ||| | ||||||||||||||||||||||||    
T  46515915 cgtgtcacgatttttggcttgttgggcacgttttcaggataaggttggtcacaccttgggtcgtatgcaccaagcatgtcacgatttggcaaaacgtgac 46516014  T
Q  521 acgtttttga 530  Q
    ||| ||||||    
T  46516015 acgattttga 46516024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 373 - 530
Target Start/End: Complemental strand, 49092230 - 49092070
Alignment:
Q  373 gtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcg-acttgtttgacacg-ttttcaggataaggttagtc 470  Q
    ||||||||| ||||||||||   |||||||| |||||||||| ||||| ||||||||||||||| ||||| | |  ||| |||||||||||||||| |||    
T  49092230 gtgagcatggtttgcagggtgctcaatcgtgtcacgattttgggaaaatgtgacacgattttcgaacttgctgggtacgtttttcaggataaggttggtc 49092131  T
Q  471 gtatcatgagtcgtacgcatcaaccgtgtcacgatttg-gcaaaacgtgacacgtttttga 530  Q
    ||| | ||  ||||| ||| |||  ||| |||||||||  |||||||||||||| ||||||    
T  49092130 gtaccttggatcgtatgcaccaatagtgacacgatttgaacaaaacgtgacacgattttga 49092070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 411 - 530
Target Start/End: Complemental strand, 496461 - 496342
Alignment:
Q  411 tttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggc 510  Q
    |||| ||||||||| |||| |||| | | || ||||||| |||||||||||||||| |   || | ||||||||||||||||||||||||||||||| |     
T  496461 tttgggaaaacgtgtcacggtttttggcatgcttgacacattttcaggataaggttggatttaccttgagtcgtacgcatcaaccgtgtcacgattttgg 496362  T
Q  511 aaaacgtgacacgtttttga 530  Q
     |||||||| ||| ||||||    
T  496361 gaaacgtgatacgattttga 496342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 351 - 435
Target Start/End: Complemental strand, 25767481 - 25767398
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttc 435  Q
    |||| ||||||||||  ||||||||||| || ||||||||||  | |||||||||||||||||| |||| |||||||||||||||    
T  25767481 cgtgacacgatttcgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgattttgggaaatcgtgacacgattttc 25767398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 487
Target Start/End: Complemental strand, 30026554 - 30026391
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgtttt------gcagggtatccaatcgtgacacgattttgagaaaacg 422  Q
    |||||||||||||||| | | |||||||||||||| || |||||| |||||||||||      |  | ||   ||||||||||| ||||||| | |||||    
T  30026554 aatcgtgacacgatttcttaggcgtgtcacgatttggctatgccgagagcatgttttctgagtgatgagtgatcaatcgtgacatgattttggggaaacg 30026455  T
Q  423 tgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacg 487  Q
    |||||||||||||  ||||   | |||| ||||||||||||||| |||||| | |||||||||||    
T  30026454 tgacacgattttcagcttgccgggcacg-tttcaggataaggttggtcgtaccttgagtcgtacg 30026391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 413
Target Start/End: Complemental strand, 34311369 - 34311285
Alignment:
Q  328 gaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgatttt 413  Q
    ||||||||||||||||||  || |||||||||||||  | | || ||||||||| |||||||||| ||||||| ||||||||||||    
T  34311369 gaatcgtgacacgatttggcaaacgtgtcacgatttt-ctaggcagtgagcatggtttgcagggtgtccaatcatgacacgatttt 34311285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 433
Target Start/End: Original strand, 48408441 - 48408544
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| |||||||| |  ||||||||||| || ||||||||||  | |||||||||||||| |||||||| ||||||||    
T  48408441 aatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcttgagaaatcgtgacac 48408539  T
Q  429 gattt 433  Q
    |||||    
T  48408540 gattt 48408544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 450 - 528
Target Start/End: Original strand, 44847762 - 44847839
Alignment:
Q  450 gttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttttt 528  Q
    ||||||||||||||||| |||||| | || |||||||| ||||| |||| |||||||||| |||||||| |||| ||||    
T  44847762 gttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtggcacgatttgg-aaaacgtggcacgatttt 44847839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 435
Target Start/End: Complemental strand, 21646578 - 21646495
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttc 435  Q
    |||| ||||||||||  ||||||||||| || ||||||||||  | |||||||||||||| |||  ||| |||||||||||||||    
T  21646578 cgtgacacgatttcgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgattttc 21646495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 433
Target Start/End: Original strand, 39730976 - 39731079
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| |||||||| |  ||||||||||| || ||||||||||  | |||||||||||||| ||||| || ||||||||    
T  39730976 aatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacac 39731074  T
Q  429 gattt 433  Q
    |||||    
T  39731075 gattt 39731079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 433
Target Start/End: Complemental strand, 43504678 - 43504575
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| ||||||||||  ||||||||||| || ||||||||||  | ||||||||||||||  || |||| ||||||||    
T  43504678 aatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcgtgggaaatcgtgacac 43504580  T
Q  429 gattt 433  Q
    |||||    
T  43504579 gattt 43504575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 474
Target Start/End: Complemental strand, 2361639 - 2361561
Alignment:
Q  397 aatcgtgacacgattttgagaaaacgtgacacga-ttttcgacttgtttgacacgttttcaggataaggttagtcgtat 474  Q
    |||||||||||||||||| | ||||||||||| | ||||||| ||| | ||||  |||| ||||||||||| |||||||    
T  2361639 aatcgtgacacgattttggggaaacgtgacacaatttttcgatttgctggacaaatttttaggataaggttggtcgtat 2361561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 3529869 - 3529903
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  3529869 aaattgtgtgagctctagccactagactacttgac 3529903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 7401368 - 7401334
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  7401368 aaattgtgtgagctctagccactagactacttgac 7401334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 24061310 - 24061276
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  24061310 aaattgtgtgagctctagccactagactacttgac 24061276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 29281323 - 29281289
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  29281323 aaattgtgtgagctctagccactagactacttgac 29281289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 530
Target Start/End: Complemental strand, 30025114 - 30025080
Alignment:
Q  496 gtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||||||||||||||||||||||||||| ||||||    
T  30025114 gtgtcacgatttggcaaaacgtgacacgattttga 30025080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 31077884 - 31077850
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  31077884 aaattgtgtgagctctagccactagactacttgac 31077850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 530
Target Start/End: Complemental strand, 31733360 - 31733310
Alignment:
Q  480 gtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||||||||| ||| ||||| ||||||||| ||||||||||||| ||||||    
T  31733360 gtcgtacgcaccaaacgtgtaacgatttgggaaaacgtgacacgattttga 31733310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 36174479 - 36174513
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  36174479 aaattgtgtgagctctagccactagactacttgac 36174513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 48288390 - 48288356
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  48288390 aaattgtgtgagctctagccactagactacttgac 48288356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 49089589 - 49089622
Alignment:
Q  5 aattgtgtgagctctagccactcgactacttgac 38  Q
    |||||||||||||||||||||| |||||||||||    
T  49089589 aattgtgtgagctctagccactagactacttgac 49089622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 8e-44; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 286 - 530
Target Start/End: Original strand, 32636401 - 32636644
Alignment:
Q  286 gtgttgtgtatgccttcaaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgtttt 385  Q
    |||||||||||| ||||||| ||||||| ||| |||   |  ||||||||||||||||||  ||||||||||| |||||   | || |||| ||||||||    
T  32636401 gtgttgtgtatgtcttcaaatttgtgaagttgagaatgataagaatcgtgacacgatttggcaagcgtgtcaccatttct--aggcagtgaacatgtttt 32636498  T
Q  386 gcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgt 484  Q
    ||| ||| ||||||||||||||||||||| ||||||||| |||||||||||||||| | | || | |||||||||||||||| |||||| | || ||| |    
T  32636499 gcaaggtgtccaatcgtgacacgattttgggaaaacgtggcacgattttcgacttgctgggcaagtttttcaggataaggttggtcgtaccttgggtctt 32636598  T
Q  485 acgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||| ||| ||||||||||||||| ||||||||||| | ||||||    
T  32636599 acgcaccaaacgtgtcacgatttgggaaaacgtgacatgattttga 32636644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 374 - 529
Target Start/End: Original strand, 5057495 - 5057650
Alignment:
Q  374 tgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgta 473  Q
    |||||||  ||| |||||| |||||||||||||||||||||  |||||||||||| ||||||||||||||   || ||||||||||||||||| ||||||    
T  5057495 tgagcatagttttcagggtgtccaatcgtgacacgattttggtaaaacgtgacacaattttcgacttgttgagcaagttttcaggataaggttggtcgta 5057594  T
Q  474 tcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttg 529  Q
     | |  ||||||||||||||||||||||| |||||| ||||||||||||| |||||    
T  5057595 cctttggtcgtacgcatcaaccgtgtcacaatttgggaaaacgtgacacgattttg 5057650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 379 - 530
Target Start/End: Complemental strand, 16651121 - 16650970
Alignment:
Q  379 atgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatg 478  Q
    ||||||| |||||||  ||||| ||||||||||||| ||||||||||||||||||   ||||||| |  ||||||||||||||||||| |||||| | ||    
T  16651121 atgtttttcagggtactcaatcatgacacgattttgggaaaacgtgacacgatttataacttgttgggtacgttttcaggataaggttggtcgtaccttg 16651022  T
Q  479 agtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
      ||||||||| |||||||||||||||||||||||| |||||||| ||||||    
T  16651021 gatcgtacgcaccaaccgtgtcacgatttggcaaaatgtgacacgattttga 16650970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 373 - 522
Target Start/End: Complemental strand, 42426741 - 42426591
Alignment:
Q  373 gtgagcatg-ttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcg 471  Q
    ||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||  ||| | | || ||||||||||||||||| ||||    
T  42426741 gtgagcatggttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacaattttcggtttgctgggcaagttttcaggataaggttggtcg 42426642  T
Q  472 tatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacac 522  Q
    || | || |||||||||| ||| | ||||||||||||| ||||||||||||    
T  42426641 taccttgggtcgtacgcaccaaacatgtcacgatttgggaaaacgtgacac 42426591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 396 - 530
Target Start/End: Complemental strand, 14520745 - 14520611
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaac 494  Q
    |||||||| || ||||||| |||||||||||||||||||| | |||||| |  ||||||||||||||||||| |||||| | || ||||||||||| ||     
T  14520745 caatcgtgtcatgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcattaat 14520646  T
Q  495 cgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||||||||||||| ||||||||||||| ||||||    
T  14520645 cgtgtcacgatttgg-aaaacgtgacacgattttga 14520611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 329 - 506
Target Start/End: Original strand, 13239372 - 13239548
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgc-aatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    |||||||||||||||||  |||||||||||||||| |  |||| || |||| ||||||  ||||| | ||||||||||| ||||||| | ||||||||||    
T  13239372 aatcgtgacacgatttggtaagcgtgtcacgattttggtaatgtcgagagc-tgttttt-agggtgttcaatcgtgacaagattttgggtaaacgtgaca 13239469  T
Q  428 cgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatt 506  Q
    |||| || |||||| | |||| ||||||||||||||||| |||||| | || |||||||||||||| |||| |||||||    
T  13239470 cgatctttgacttgctggacaagttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgatt 13239548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 287 - 506
Target Start/End: Original strand, 37438724 - 37438942
Alignment:
Q  287 tgttgtgtatgccttcaaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttg 386  Q
    |||||| |||| ||||||| ||||||| ||| |||   |||||||||||||| |||||  | | ||||  |||||||  ||| || ||||||||| |||     
T  37438724 tgttgtatatgtcttcaaatttgtgaagttgagaatg-ttggaatcgtgacatgattttggcatcgtggtacgatttt-caaggcagtgagcatggtttt 37438821  T
Q  387 cagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgta 485  Q
    ||| || ||||||||||||| ||||||| ||||||||||||||||||| | |||||| | || | |||||||||||||||| |||||| | || ||||||    
T  37438822 cagagtgtccaatcgtgacatgattttgggaaaacgtgacacgatttttggcttgttgggcaagattttcaggataaggtttgtcgtaccttgggtcgta 37438921  T
Q  486 cgcatcaaccgtgtcacgatt 506  Q
    |||||||| |||| |||||||    
T  37438922 cgcatcaatcgtgacacgatt 37438942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 413
Target Start/End: Original strand, 27014944 - 27015038
Alignment:
Q  318 ggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgatttt 413  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||| |||||| || |||| |||||||||||||  |||||||||||||||||||    
T  27014944 ggaaaacttggaatcgtgacactatttgtgaagcgtgtcatgattttgcaatgtcgagagc-tgttttgcagggtgcccaatcgtgacacgatttt 27015038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 374 - 522
Target Start/End: Original strand, 13487869 - 13488015
Alignment:
Q  374 tgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgta 473  Q
    ||||||| |||| ||||||   ||||||||||||||||||| ||||||    ||||||||||| |||| | | || ||||||||||||||||| ||||||    
T  13487869 tgagcatatttttcagggtgctcaatcgtgacacgattttgggaaaacag--cacgattttcggcttgctgggcaagttttcaggataaggttggtcgta 13487966  T
Q  474 tcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacac 522  Q
     | || |||||||||| ||| ||||||||||||||| ||||||||||||    
T  13487967 ccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacac 13488015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 320 - 413
Target Start/End: Original strand, 19806038 - 19806130
Alignment:
Q  320 aaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgatttt 413  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| |||||| || |||| |||||||||||||  |||||||||||||||||||    
T  19806038 aaaactttgaatcgtgacacgatttgtgacgcgtgtcacgattttgcaatgtcgagagc-tgttttgcagggtgcccaatcgtgacacgatttt 19806130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 329 - 473
Target Start/End: Complemental strand, 30683456 - 30683313
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgc-aatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    ||||||||||| |||||  |||||||||||||||| |  |||| || ||| ||||||| ||| || |||||||||||||| |||||| ||||||||||||    
T  30683456 aatcgtgacacaatttgacaagcgtgtcacgattttggtaatgtcgagag-atgtttt-cagagtgtccaatcgtgacacaattttgggaaaacgtgaca 30683359  T
Q  428 cgattttcgacttgtttgacacgttttcaggataaggttagtcgta 473  Q
    |||||||||||||| | | || ||||||||||||||||| ||||||    
T  30683358 cgattttcgacttgctaggcaagttttcaggataaggttggtcgta 30683313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 383 - 530
Target Start/End: Original strand, 11916540 - 11916688
Alignment:
Q  383 tttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagt 481  Q
    ||||||||||   |||||||| |||||||||| |||||||||||||||||||| | |||||| |  | ||||||||||| ||||| |||||| | || ||    
T  11916540 tttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttgggtatgttttcaggatcaggttggtcgtaccttgggt 11916639  T
Q  482 cgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||||||| ||| ||| ||||||||||  ||||||||||||| ||||||    
T  11916640 cgtacgcaccaatcgtatcacgatttgagaaaacgtgacacgattttga 11916688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 330 - 473
Target Start/End: Complemental strand, 42428966 - 42428823
Alignment:
Q  330 atcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatg-ttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    |||||||||||||||   ||||||||||||||||  | | |  ||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||    
T  42428966 atcgtgacacgatttagtaagcgtgtcacgatttt-ctaggaagtgagcatggttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacac 42428868  T
Q  429 gattttcgacttgtttgacacgttttcaggataaggttagtcgta 473  Q
    |||||| | |||| | | || ||||| ||||||||||| ||||||    
T  42428867 gatttttggcttgctgggcaagtttttaggataaggttggtcgta 42428823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 522
Target Start/End: Original strand, 12083693 - 12083885
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||||||    | |||||||||||||| ||  || ||||||||| ||| ||||||   |||| ||| |||  ||||| |||||||||||||    
T  12083693 aatcgtgacacgatttcatcaacgtgtcacgatttcccag-gcagtgagcatggtttacagggtgctcaattgtgtcacagttttgggaaaacgtgacac 12083791  T
Q  429 gattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacac 522  Q
    ||||||| | |||||| |  ||||||||||||||||||| |||||| | || |||||| ||| ||| ||||||||||||||| ||||||||||||    
T  12083792 gattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcgtatgcaccaatcgtgtcacgatttgg-aaaacgtgacac 12083885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 315 - 413
Target Start/End: Complemental strand, 39469073 - 39468976
Alignment:
Q  315 ttgggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgatttt 413  Q
    ||||||||||||  ||||||||||||||||||||||||||||| ||||| |||||| || |||| ||||||||||| |  |||||||||||||||||||    
T  39469073 ttgggaaaactttaaatcgtgacacgatttgtgaagcgtgtcatgattttgcaatgtcgagagc-tgttttgcaggatgcccaatcgtgacacgatttt 39468976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 421 - 530
Target Start/End: Original strand, 19806117 - 19806226
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgac 520  Q
    |||||||||||||||| |||| | | |||||||| ||||||||||| |||||| | || |||||||||| ||| |||||||||| |||| ||||||||||    
T  19806117 cgtgacacgattttcggcttgctaggcacgtttttaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgacttgggaaaacgtgac 19806216  T
Q  521 acgtttttga 530  Q
    ||| ||||||    
T  19806217 acgattttga 19806226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 421 - 529
Target Start/End: Original strand, 27015025 - 27015133
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgac 520  Q
    |||||||||||||||  |||||| | || ||||||||||||||||| |||||| | || |||||||||| ||| ||||||||||||||| ||| ||||||    
T  27015025 cgtgacacgattttcagcttgttgggcatgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 27015124  T
Q  521 acgtttttg 529  Q
    ||| |||||    
T  27015125 acgattttg 27015133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 351 - 528
Target Start/End: Original strand, 9352872 - 9353048
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgacac 449  Q
    |||| |||||||| | |||||||||||| || |||||||||| || ||||||| ||||||| || |||| |||||||||||||||  ||||| | |  |     
T  9352872 cgtgacacgattttgtaatgccgtgagc-tggtttgcagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggttaa 9352970  T
Q  450 gttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttttt 528  Q
    ||||||||||||||||| |||||| | || |||||||  ||||| |||| |||||||||| |||||||| |||| ||||    
T  9352971 gttttcaggataaggttggtcgtaccttgggtcgtacatatcaatcgtggcacgatttgg-aaaacgtggcacgatttt 9353048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 328 - 486
Target Start/End: Original strand, 40146668 - 40146825
Alignment:
Q  328 gaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    ||||||||||||||| | |||| |||| ||||||||  | | || |||| |||| ||| |||||| ||||||||||||||||||||| ||||| |||||     
T  40146668 gaatcgtgacacgatctatgaaccgtggcacgatttt-ctaggcagtgaacatggttttcagggtgtccaatcgtgacacgattttgggaaaatgtgact 40146766  T
Q  428 cgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtac 486  Q
    ||||||||  |||||| | ||||||||||||| || ||| |||||| | || |||||||    
T  40146767 cgattttcagcttgttggtcacgttttcaggaaaaagttggtcgtaccttgggtcgtac 40146825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 434
Target Start/End: Original strand, 213007 - 213068
Alignment:
Q  373 gtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgatttt 434  Q
    ||||||||| |||||||||  ||||||||||||||||||||| |||||||||||||||||||    
T  213007 gtgagcatggtttgcagggcgtccaatcgtgacacgattttgggaaaacgtgacacgatttt 213068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 396 - 528
Target Start/End: Original strand, 31004735 - 31004868
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttc-aggataaggttagtcgtatcatgagtcgtacgcatcaac 494  Q
    |||||||| ||||||| || |||||||||| ||||| ||| ||||| | | ||||||||  ||||||||||| || |||   || |||||||||| |||     
T  31004735 caatcgtgtcacgattgtgggaaaacgtgatacgatattcaacttgctgggcacgttttttaggataaggttggttgtactttgggtcgtacgcaccaat 31004834  T
Q  495 cgtgtcacgatttggcaaaacgtgacacgttttt 528  Q
    |||||||||||||||  |||||||||||||||||    
T  31004835 cgtgtcacgatttggacaaacgtgacacgttttt 31004868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 421 - 507
Target Start/End: Original strand, 535614 - 535700
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    |||||||||||||||| |||| | |||| ||||||||||||||||| |||||| | || |||||| ||| ||| |||||||||||||    
T  535614 cgtgacacgattttcggcttgctggacaagttttcaggataaggttggtcgtaccttgggtcgtatgcaccaaacgtgtcacgattt 535700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 433
Target Start/End: Complemental strand, 28751178 - 28751027
Alignment:
Q  283 tatgtgttgtgtatgccttcaaaattgtgaatttgggaaaacttggaatcgtgacacgatttgtg--aagcgtgtcacgatttcgcaatgccgtgagcat 380  Q
    ||||||||||||||| ||||||| |||| || ||| |||      ||||||||||||||| | ||  || ||| ||||||||||| |||| || |||  |    
T  28751178 tatgtgttgtgtatgtcttcaaatttgtaaagttgagaatgtaaagaatcgtgacacgatatttggcaatcgtttcacgatttcgtaatgtcgagagt-t 28751080  T
Q  381 gttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattt 433  Q
    |||||||||||| | ||||||||||||||||||| ||||||||||||| ||||    
T  28751079 gttttgcagggtgttcaatcgtgacacgattttgggaaaacgtgacacaattt 28751027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 473
Target Start/End: Original strand, 38746456 - 38746533
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgta 473  Q
    ||||||||||||  |||||  |||||||||||||||||||| |||| | |||| ||||||||||||||||| ||||||    
T  38746456 caatcgtgacacatttttggaaaaacgtgacacgattttcggcttgctggacaagttttcaggataaggttggtcgta 38746533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 421 - 528
Target Start/End: Original strand, 11181437 - 11181544
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgac 520  Q
    ||||||||||||||||| ||||||| ||||| | || ||||||||| ||| || | || || ||||| |||||||||||||| ||||||  || ||||||    
T  11181437 cgtgacacgattttcgatttgtttggcacgtatacaagataaggttggtcataccgtgggttgtacgtatcaaccgtgtcacaatttggtcaatcgtgac 11181536  T
Q  521 acgttttt 528  Q
    || |||||    
T  11181537 acattttt 11181544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 507
Target Start/End: Complemental strand, 39468989 - 39468903
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    |||||||||||||||| |||| | |||||||||| ||||||||||| |||||| | || |||||| ||| ||| ||||||| |||||    
T  39468989 cgtgacacgattttcggcttgctggacacgtttttaggataaggttggtcgtaccttgggtcgtatgcaccaaacgtgtcatgattt 39468903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 457 - 530
Target Start/End: Complemental strand, 16650044 - 16649971
Alignment:
Q  457 ggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||||||||| |||||| | ||  ||||||||| |||||||||||||||||||||||| |||||| | ||||||    
T  16650044 ggataaggttggtcgtaccttggatcgtacgcaccaaccgtgtcacgatttggcaaaatgtgacatgattttga 16649971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 433
Target Start/End: Complemental strand, 9789766 - 9789663
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| ||||||||||  ||||||||||| || ||||||||||  | ||||||||||||||| || |||| ||||||||    
T  9789766 aatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacac 9789668  T
Q  429 gattt 433  Q
    |||||    
T  9789667 gattt 9789663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 480 - 523
Target Start/End: Complemental strand, 3076023 - 3075980
Alignment:
Q  480 gtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacg 523  Q
    ||||||||||||||| |||||||||||||||||| |||||||||    
T  3076023 gtcgtacgcatcaactgtgtcacgatttggcaaatcgtgacacg 3075980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 480 - 530
Target Start/End: Original strand, 533539 - 533589
Alignment:
Q  480 gtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||||||||| ||| ||||||||||||||| ||||||||||||| ||||||    
T  533539 gtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttga 533589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 413
Target Start/End: Original strand, 11181412 - 11181450
Alignment:
Q  375 gagcatgttttgcagggtatccaatcgtgacacgatttt 413  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  11181412 gagcatgttttgcagggtgtccaatcgtgacacgatttt 11181450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 329 - 434
Target Start/End: Complemental strand, 3076169 - 3076064
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||||||||||||||||| |||||||  | |||  |||||||||||||   | || | |||  |||||| ||||||| | || ||||||||    
T  3076169 aatcgtgacacgatttgtgaagcgtgttacgattttcctatgttgtgagcatgttttcttgtgtgtacaaatgtgacaagattttgggcaaccgtgacac 3076070  T
Q  429 gatttt 434  Q
    ||||||    
T  3076069 gatttt 3076064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 433
Target Start/End: Complemental strand, 18442190 - 18442087
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| |||||||||   ||||||||||| || ||||||||||  | ||||||||||||||| || |||| ||||||||    
T  18442190 aatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacac 18442092  T
Q  429 gattt 433  Q
    |||||    
T  18442091 gattt 18442087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 433
Target Start/End: Original strand, 26177509 - 26177612
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| ||||||||||  ||||||||||| || ||||||||||  | ||||||||||||||  || |||| ||||||||    
T  26177509 aatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcatgggaaatcgtgacac 26177607  T
Q  429 gattt 433  Q
    |||||    
T  26177608 gattt 26177612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 11897337 - 11897371
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  11897337 aaattgtgtgagctctagccactagactacttgac 11897371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 15241485 - 15241519
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  15241485 aaattgtgtgagctctagccactagactacttgac 15241519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 16386722 - 16386688
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  16386722 aaattgtgtgagctctagccactagactacttgac 16386688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 433
Target Start/End: Original strand, 16407706 - 16407787
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattt 433  Q
    |||| |||||||| |  ||||||||||| || ||||||||||  | |||||||||||||| ||||| || |||||||||||||    
T  16407706 cgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgattt 16407787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 16891435 - 16891469
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  16891435 aaattgtgtgagctctagccactagactacttgac 16891469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 435
Target Start/End: Complemental strand, 24136441 - 24136336
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| ||| ||||||  |||||||||||  |||| |||||||  | |||||||||||||| ||| |||| ||||||||    
T  24136441 aatcgtgacacgaatttggcatcgtgacacaatttcgtgatgccgtgagctagttt-gcagggtgccaaatcgtgacacgatcttgggaaatcgtgacac 24136343  T
Q  429 gattttc 435  Q
    |||||||    
T  24136342 gattttc 24136336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 451 - 530
Target Start/End: Original strand, 30182329 - 30182410
Alignment:
Q  451 ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatt--tggcaaaacgtgacacgtttttga 530  Q
    |||||||||||||||| |||||| | ||  ||||||||||||| |||| |||||||   || ||||||||||||| ||||||    
T  30182329 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattgggggaaaaacgtgacacgattttga 30182410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 434
Target Start/End: Complemental strand, 30683307 - 30683269
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgatttt 434  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  30683307 caatcgtgacacaattttgggaaaacgtgacacgatttt 30683269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 39886193 - 39886159
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  39886193 aaattgtgtgagctctagccactagactacttgac 39886159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 41319432 - 41319398
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  41319432 aaattgtgtgagctctagccactagactacttgac 41319398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 43580967 - 43581001
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  43580967 aaattgtgtgagctctagccactagactacttgac 43581001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 8478873 - 8478840
Alignment:
Q  5 aattgtgtgagctctagccactcgactacttgac 38  Q
    |||||||||||||||||||||| |||||||||||    
T  8478873 aattgtgtgagctctagccactagactacttgac 8478840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 11786041 - 11786008
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttga 37  Q
    ||||||||||||||||||||||| ||||||||||    
T  11786041 aaattgtgtgagctctagccactagactacttga 11786008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 16789159 - 16789192
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttga 37  Q
    ||||||||||||||||||||||| ||||||||||    
T  16789159 aaattgtgtgagctctagccactagactacttga 16789192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 523
Target Start/End: Original strand, 25412503 - 25412576
Alignment:
Q  451 ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatt-tggcaaaacgtgacacg 523  Q
    |||||||||||||||| |||||| | ||  ||||||||||||| |||| |||||||  || |||||||||||||    
T  25412503 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacg 25412576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 451 - 530
Target Start/End: Original strand, 13342802 - 13342882
Alignment:
Q  451 ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatt-tggcaaaacgtgacacgtttttga 530  Q
    |||||||||||||||| |||||| | |   ||||||||||||| |||| |||||||  || ||||||||||||| ||||||    
T  13342802 ttttcaggataaggttggtcgtaccttagatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattttga 13342882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 508
Target Start/End: Original strand, 36931956 - 36932044
Alignment:
Q  421 cgtgacacgattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttg 508  Q
    ||||||||||||||| | |||| |||  | ||||||||||||||||| |||||| | || |||||||| ||||| |||| ||| |||||    
T  36931956 cgtgacacgattttcaaacttgcttgttaagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacaatttg 36932044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 373 - 529
Target Start/End: Complemental strand, 81006 - 80850
Alignment:
Q  373 gtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgt 472  Q
    ||||||||  ||| |||||||||||||||||||||||||||| ||||||||| ||||||||||| |||| | | || ||||||||||||||||| |||||    
T  81006 gtgagcattgttttcagggtatccaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgggcaagttttcaggataaggttggtcgt 80907  T
Q  473 atcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttg 529  Q
    | | || |||||||||| ||| ||||||||||||||| ||| ||||||||| |||||    
T  80906 accttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacgattttg 80850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 3e-34; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 329 - 530
Target Start/End: Complemental strand, 22964280 - 22964079
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgc-aatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    ||||||||||||||||   | |||||||||||||| |  |||| || |||| ||||||||||||| | ||||||||| ||||||||| ||||||||||||    
T  22964280 aatcgtgacacgatttcataggcgtgtcacgattttggtaatgtcgagagc-tgttttgcagggtgttcaatcgtgatacgattttgggaaaacgtgaca 22964182  T
Q  428 cgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttt 527  Q
    ||||||| | |||| | |||| ||||||||||||||||| |||||| | ||  ||||||||  ||| |||||||| |||||| ||||||||||||| |||    
T  22964181 cgatttttggcttgctggacaagttttcaggataaggttggtcgtaccttgtatcgtacgcgccaaacgtgtcacaatttgggaaaacgtgacacgattt 22964082  T
Q  528 tga 530  Q
    |||    
T  22964081 tga 22964079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 329 - 530
Target Start/End: Original strand, 23824113 - 23824314
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgc-aatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    ||||||||||||||||   | |||||||||||||| |  |||| || |||| ||||||||||||| | ||||||||| ||||||||| ||||||||||||    
T  23824113 aatcgtgacacgatttcataggcgtgtcacgattttggtaatgtcgagagc-tgttttgcagggtgttcaatcgtgatacgattttgggaaaacgtgaca 23824211  T
Q  428 cgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttt 527  Q
    ||||||| | |||| | |||| ||||||||||||||||| |||||| | ||  ||||||||  ||| |||||||| |||||| ||||||||||||| |||    
T  23824212 cgatttttggcttgctggacaagttttcaggataaggttggtcgtaccttgtatcgtacgcgccaaacgtgtcacaatttgggaaaacgtgacacgattt 23824311  T
Q  528 tga 530  Q
    |||    
T  23824312 tga 23824314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 397 - 523
Target Start/End: Original strand, 24435555 - 24435681
Alignment:
Q  397 aatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccg 496  Q
    ||||||| || ||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||| | || || ||||||| ||||||    
T  24435555 aatcgtgtcatgattttgggaaaacgtgacacgattttcaacttgtttggcacgttttcaggataaggttggtcgtaccttgggttgtacgcaccaaccg 24435654  T
Q  497 tgtcacgatttggcaaaacgtgacacg 523  Q
    |||||||||||||| || |||||||||    
T  24435655 tgtcacgatttggccaatcgtgacacg 24435681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 328 - 529
Target Start/End: Original strand, 21593067 - 21593267
Alignment:
Q  328 gaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgaca 427  Q
    ||||||||||| ||||||  || |||||||||||||  | | |  ||||||||| ||| |||||| |||||||||||||| |||||| ||||||||||||    
T  21593067 gaatcgtgacatgatttggcaaccgtgtcacgatttt-ctaggtagtgagcatggttttcagggtgtccaatcgtgacacaattttgggaaaacgtgaca 21593165  T
Q  428 cgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttt 527  Q
    ||||||||| |||| | | || ||||| ||||||||||| |||||| | || ||||| || | ||||||||||||||||||| |||| |||||||| |||    
T  21593166 cgattttcggcttgctgggcatgtttttaggataaggttggtcgtaccttgggtcgttcgtaccaaccgtgtcacgatttgggaaaatgtgacacgattt 21593265  T
Q  528 tg 529  Q
    ||    
T  21593266 tg 21593267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 522
Target Start/End: Original strand, 21272525 - 21272697
Alignment:
Q  350 gcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacac 449  Q
    |||||||||||||| ||||| ||   ||| ||||||| ||||| ||||||||||||||||||||| | || |||| ||||||||| ||| |||||| |||    
T  21272525 gcgtgtcacgatttggcaataccaatagcttgttttgaagggtgtccaatcgtgacacgattttgggtaatcgtgtcacgatttttgacatgtttggcac 21272624  T
Q  450 gttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacac 522  Q
    ||||||||||||||||| ||| || | ||  ||||||||| ||||||||||| |||||||| || ||||||||    
T  21272625 gttttcaggataaggttggtcataccttggatcgtacgcaccaaccgtgtcaagatttggccaatcgtgacac 21272697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 349 - 523
Target Start/End: Original strand, 10076727 - 10076900
Alignment:
Q  349 agcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgaca 448  Q
    ||||||||||||||| |||||| || |||| |||||||||||||  |||||| ||| ||||||||| |||||||||| ||||||||  ||||| |    |    
T  10076727 agcgtgtcacgattttgcaatgtcgagagc-tgttttgcagggtgcccaatcatgatacgattttgggaaaacgtgatacgatttttaacttgctgatta 10076825  T
Q  449 cgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacg 523  Q
    |||||||||||||||||| |||||| | || |||||||||| ||| |||||||||||||||  ||||||||||||    
T  10076826 cgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacg 10076900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 318 - 466
Target Start/End: Original strand, 17759346 - 17759493
Alignment:
Q  318 ggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgaga 417  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||| || |||  ||| ||  |||||  |||| ||||||||||||||| |     
T  17759346 ggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacaattttgcaatgtcgagag-ttgtattttagggtgcccaaccgtgacacgattttgggg 17759444  T
Q  418 aaacgtgacacgattttcgacttgtttgacacgttttcaggataaggtt 466  Q
    ||||||||||| ||||||| |||| | |||| |||||||||||||||||    
T  17759445 aaacgtgacacaattttcggcttgctggacaagttttcaggataaggtt 17759493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 388 - 507
Target Start/End: Complemental strand, 9183500 - 9183381
Alignment:
Q  388 agggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacg 487  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||| |||||| | | || ||||||||||||||||| |||||| | || ||||||||    
T  9183500 agggtgtccaatcgtgacacgattttgggaaaacgtgacacgatttttgacttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacg 9183401  T
Q  488 catcaaccgtgtcacgattt 507  Q
    |||||| |||| ||||||||    
T  9183400 catcaatcgtgacacgattt 9183381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 396 - 530
Target Start/End: Complemental strand, 31980032 - 31979898
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    |||||||| ||||||||||  |||||||||||| |||||| ||||| | | |||||||||||||||||||| ||||||   ||||||||||||| ||| |    
T  31980032 caatcgtgtcacgattttggaaaaacgtgacacaattttcaacttgctgggcacgttttcaggataaggttggtcgtactttgagtcgtacgcaccaatc 31979933  T
Q  496 gtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    ||||||||||||||  |||||||||||| ||||||    
T  31979932 gtgtcacgatttggacaaacgtgacacgattttga 31979898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 400 - 521
Target Start/End: Original strand, 26661421 - 26661542
Alignment:
Q  400 cgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgt 499  Q
    ||||||||||||||| ||||| |||||| ||||||||||||| | ||| |||||||||||||||||| |||||| | || |||||||||| ||||  |||    
T  26661421 cgtgacacgattttgggaaaatgtgacaagattttcgacttgctggactcgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaacattgt 26661520  T
Q  500 cacgatttggcaaaacgtgaca 521  Q
    |||||||||| |||||||||||    
T  26661521 cacgatttgggaaaacgtgaca 26661542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 400 - 521
Target Start/End: Original strand, 26767392 - 26767513
Alignment:
Q  400 cgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgt 499  Q
    ||||||||||||||| ||||| |||||| ||||||||||||| | ||| |||||||||||||||||| |||||| | || |||||||||| ||||  |||    
T  26767392 cgtgacacgattttgggaaaatgtgacaagattttcgacttgctggactcgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaacattgt 26767491  T
Q  500 cacgatttggcaaaacgtgaca 521  Q
    |||||||||| |||||||||||    
T  26767492 cacgatttgggaaaacgtgaca 26767513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 329 - 531
Target Start/End: Original strand, 31085988 - 31086191
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||||||    ||||||||| ||||||   | || ||||||||| ||||||||||   |||||||| ||||||||||  ||||||||||||    
T  31085988 aatcgtgacacgatttcatcagcgtgtcatgatttcc--aggcagtgagcatggtttgcagggtgctcaatcgtgtcacgattttggaaaaacgtgacac 31086085  T
Q  429 gattttc-gacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggc-aaaacgtgacacgtt 525  Q
    |||||||  ||||| | |  ||| |||||||||||||||| |||||| | || |||||||||| ||| |||||||||||||||| ||||||||||||| |    
T  31086086 gattttcaaacttgctaggtacgtttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggcaaaaacgtgacacgat 31086185  T
Q  526 tttgat 531  Q
    ||||||    
T  31086186 tttgat 31086191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 287 - 530
Target Start/End: Complemental strand, 33211774 - 33211533
Alignment:
Q  287 tgttgtgtatgccttcaaaattgtgaatttgggaaaacttggaa-tcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgtttt 385  Q
    |||||| |||||||||||| ||||||| ||| ||||||   ||| ||||||||||||||   | | |||||||||||| || |||||| |||||||||||    
T  33211774 tgttgtttatgccttcaaa-ttgtgaagttgtgaaaacagagaaatcgtgacacgatttcataggtgtgtcacgatttggctatgccgagagcatgtttt 33211676  T
Q  386 gcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgta 485  Q
     | | || ||||||||| |||||||||||  |||||||| || |||||| | |||||| | |||||||| |||||| ||||  |||||   || ||||||    
T  33211675 -ctgagtgtccaatcgtaacacgattttggaaaaacgtgtcatgattttgg-cttgttgggcacgtttttaggatatggtttatcgtactttgggtcgta 33211578  T
Q  486 cgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||| ||||| |||||||||||| |||||| ||||||| ||||||    
T  33211577 cgcaccaaccatgtcacgatttgacaaaacatgacacgattttga 33211533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 329 - 530
Target Start/End: Original strand, 5017011 - 5017212
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||||||    | |||||||||||||| ||| || ||||||||| ||||||||||   |||||||| ||||||||||||||||||||||||    
T  5017011 aatcgtgacacgatttcatcaacgtgtcacgatttc-caa-gcagtgagcatggtttgcagggtgctcaatcgtgtcacgattttgagaaaacgtgacac 5017108  T
Q  429 gattttc-gacttgtttgacac-gttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttt 526  Q
    |||||||  ||||  | |  ||  |||||||||||||||| |||||| | || |||||||||| ||| ||||||||||||||  |||| |||||||| ||    
T  5017109 gattttcaaacttactgggtacatttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttgaaaaaatgtgacacgatt 5017208  T
Q  527 ttga 530  Q
    ||||    
T  5017209 ttga 5017212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 396 - 507
Target Start/End: Original strand, 5571846 - 5571957
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||| | | |||||||| ||| ||||||| |||||| | || |||||||||| ||| |    
T  5571846 caatcgtgtcacgattttgagaaaacgtgacacgattttcaacttgctgggcacgtttttaggttaaggttggtcgtaccttgggtcgtacgcaccaatc 5571945  T
Q  496 gtgtcacgattt 507  Q
    ||| ||||||||    
T  5571946 gtgacacgattt 5571957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 396 - 530
Target Start/End: Complemental strand, 18234599 - 18234464
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaac 494  Q
    |||||||| || ||||||| |||||||||| ||||||||| | |||| | |  ||||||||||||||||||| |||||| | || |||||||||| |||     
T  18234599 caatcgtgtcaggattttgggaaaacgtgatacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaat 18234500  T
Q  495 cgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||||||||||||||  |||||||||||| ||||||    
T  18234499 cgtgtcacgatttggacaaacgtgacacgattttga 18234464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 402 - 507
Target Start/End: Complemental strand, 26954778 - 26954674
Alignment:
Q  402 tgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtca 501  Q
    ||||||||||| || |||||||| ||||||||| | | || ||||||| |||||||||||||||| |||||| | || ||||||||||||||||||||||    
T  26954778 tgacacgattt-gataaaacgtgtcacgatttttggcatgcttgacacattttcaggataaggttggtcgtaccttgggtcgtacgcatcaaccgtgtca 26954680  T
Q  502 cgattt 507  Q
    ||||||    
T  26954679 cgattt 26954674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 396 - 503
Target Start/End: Complemental strand, 603719 - 603612
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaacc 495  Q
    ||||||||||||||||||| |||||||||||| |||||||| |||| | | || |||||||||||||||||  ||||||| ||  ||||||||| ||| |    
T  603719 caatcgtgacacgattttgggaaaacgtgacatgattttcggcttgctgggcaagttttcaggataaggttgatcgtatcttggatcgtacgcaccaaac 603620  T
Q  496 gtgtcacg 503  Q
    ||||||||    
T  603619 gtgtcacg 603612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 351 - 529
Target Start/End: Complemental strand, 3809450 - 3809276
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacg 450  Q
    |||| |||||||| |||||| || |||| ||||| | |||||  |||||||||||||||||||| | ||||||||||||||||||| ||||   |  | |    
T  3809450 cgtgacacgattttgcaatgtcgagagc-tgtttcgaagggtgcccaatcgtgacacgattttggggaaacgtgacacgattttcggcttg---ggaaag 3809355  T
Q  451 ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttg 529  Q
    |||||||||||||||| |||||| | || |||||||| | |||  |||||| ||||||| ||| ||||| ||| |||||    
T  3809354 ttttcaggataaggttggtcgtaccttgggtcgtacgtaccaaatgtgtcatgatttgggaaatcgtgatacgattttg 3809276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 522
Target Start/End: Complemental strand, 24714885 - 24714761
Alignment:
Q  397 aatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccg 496  Q
    ||||||| |||||||| || ||||||||||||||||||| ||||| | | ||||||||||||||||| || ||||||   || ||| ||||   ||||||    
T  24714885 aatcgtgccacgatttgga-aaaacgtgacacgattttcaacttgctgggcacgttttcaggataagattggtcgtactgtgggtcatacgatccaaccg 24714787  T
Q  497 tgtcacgatttggcaaaacgtgacac 522  Q
    ||||||||| |||| || ||||||||    
T  24714786 tgtcacgatatggccaatcgtgacac 24714761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 383 - 528
Target Start/End: Original strand, 5757047 - 5757192
Alignment:
Q  383 tttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgacacgttttcaggataaggttagtcgtatcatgagt 481  Q
    |||||||||| || |||||||  ||||||||| |||| |||||||||||||||  ||||| | |  | ||||||||||||||||| |||||| | |  ||    
T  5757047 tttgcagggtgtcaaatcgtggtacgattttgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtacctttggt 5757146  T
Q  482 cgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttttt 528  Q
    |||| | ||||| |||| |||||||||| |||||||| |||| ||||    
T  5757147 cgtatgtatcaatcgtggcacgatttgg-aaaacgtggcacgatttt 5757192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 344 - 430
Target Start/End: Complemental strand, 26830781 - 26830696
Alignment:
Q  344 tgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacga 430  Q
    |||||||||||||||||||| |||||| || |||| ||||||| |||||   |||||||||||||||||||   |||||||||||||    
T  26830781 tgtgaagcgtgtcacgattttgcaatgtcgagagc-tgttttgtagggtgctcaatcgtgacacgattttggagaaacgtgacacga 26830696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 507
Target Start/End: Complemental strand, 23896914 - 23896736
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||||||  | | |||| |||||||| | |||  ||||||  || |||||||||| || |||||||  ||||||||| |||| ||||||||    
T  23896914 aatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgagt-tggtttgcagggtgtcaaatcgtggtacgattttgtgaaatcgtgacac 23896816  T
Q  429 ga-ttttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    || ||||  ||||| | |  | ||||||||||||||||| |||||| | |  |||||||| ||||| |||| ||||||||    
T  23896815 gatttttaaacttgctggttaagttttcaggataaggttggtcgtaccttcggtcgtacgtatcaatcgtggcacgattt 23896736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 351 - 432
Target Start/End: Complemental strand, 2172039 - 2171959
Alignment:
Q  351 cgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgatt 432  Q
    |||| ||||||||||  ||||||||||| || ||||||||||  | |||||||||||||| ||| |||| ||||||||||||    
T  2172039 cgtgacacgatttcgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgatt 2171959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 451 - 523
Target Start/End: Complemental strand, 16452867 - 16452794
Alignment:
Q  451 ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatt-tggcaaaacgtgacacg 523  Q
    |||||||||||||||| |||||| | || |||||||||||||| |||| |||||||  || |||||||||||||    
T  16452867 ttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacg 16452794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 506
Target Start/End: Complemental strand, 5413875 - 5413820
Alignment:
Q  451 ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatt 506  Q
    |||||||||||||||| |||||| | || |||||||||||||| |||| |||||||    
T  5413875 ttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgatt 5413820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 7545418 - 7545452
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  7545418 aaattgtgtgagctctagccactagactacttgac 7545452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 12284210 - 12284244
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  12284210 aaattgtgtgagctctagccactagactacttgac 12284244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 22997425 - 22997459
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  22997425 aaattgtgtgagctctagccactagactacttgac 22997459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 23790976 - 23790942
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  23790976 aaattgtgtgagctctagccactagactacttgac 23790942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 451 - 530
Target Start/End: Complemental strand, 30834964 - 30834883
Alignment:
Q  451 ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttgg--caaaacgtgacacgtttttga 530  Q
    |||||||||||||||| |||||| | ||  ||||||||||||| |||| ||||||| ||   ||||||||||||| ||||||    
T  30834964 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaaacgtgacacgattttga 30834883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 31802142 - 31802176
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  31802142 aaattgtgtgagctctagccactagactacttgac 31802176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 31803576 - 31803542
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  31803576 aaattgtgtgagctctagccactagactacttgac 31803542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 3640604 - 3640637
Alignment:
Q  5 aattgtgtgagctctagccactcgactacttgac 38  Q
    |||||||||||||||||||||| |||||||||||    
T  3640604 aattgtgtgagctctagccactagactacttgac 3640637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 523
Target Start/End: Complemental strand, 5406625 - 5406552
Alignment:
Q  451 ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatt-tggcaaaacgtgacacg 523  Q
    |||| ||||||||||| |||||| | || |||||||||||||| |||| |||||||  || |||||||||||||    
T  5406625 tttttaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacg 5406552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 523
Target Start/End: Complemental strand, 5410950 - 5410877
Alignment:
Q  451 ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatt-tggcaaaacgtgacacg 523  Q
    |||| ||||||||||| |||||| | || |||||||||||||| |||| |||||||  || |||||||||||||    
T  5410950 tttttaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacg 5410877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 7418368 - 7418401
Alignment:
Q  5 aattgtgtgagctctagccactcgactacttgac 38  Q
    |||||||||||||||||||||||| |||||||||    
T  7418368 aattgtgtgagctctagccactcggctacttgac 7418401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 523
Target Start/End: Complemental strand, 16452756 - 16452683
Alignment:
Q  451 ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatt-tggcaaaacgtgacacg 523  Q
    |||||||||||||||| |||||| | || |||||||||||||| | || |||||||  || |||||||||||||    
T  16452756 ttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcatggcacgattggggaaaaacgtgacacg 16452683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 26347494 - 26347527
Alignment:
Q  5 aattgtgtgagctctagccactcgactacttgac 38  Q
    |||||||||||||||||||||| |||||||||||    
T  26347494 aattgtgtgagctctagccactagactacttgac 26347527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 435
Target Start/End: Complemental strand, 22709549 - 22709497
Alignment:
Q  383 tttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttc 435  Q
    ||||||||||  | |||||||||||||| ||| |||| |||||||||||||||    
T  22709549 tttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttc 22709497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 452 - 523
Target Start/End: Complemental strand, 31405100 - 31405028
Alignment:
Q  452 tttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatt-tggcaaaacgtgacacg 523  Q
    ||||||||||||||| |||||| | |  |||||||||||||| |||| |||||||  || |||||||||||||    
T  31405100 tttcaggataaggttggtcgtaccttaggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacg 31405028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 366 - 507
Target Start/End: Complemental strand, 17776 - 17635
Alignment:
Q  366 caatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgacacgttttcaggataaggt 465  Q
    ||||| || |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||| | |||| | | || | ||||| ||||||||    
T  17776 caatgtcgagagcatgttttgcagggtgtccaaccgtgacacgattttgggaaaacgtgacacgatttttggcttgctgggcaagctttcatgataaggt 17677  T
Q  466 tagtcgtatcatgagtcgtacgcatcaaccgtgtcacgattt 507  Q
    | |||||| | ||||||||||||| ||| |||||||||||||    
T  17676 tggtcgtaccctgagtcgtacgcaccaaacgtgtcacgattt 17635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 55; Significance: 2e-22; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 381 - 530
Target Start/End: Complemental strand, 6216 - 6066
Alignment:
Q  381 gttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatga 479  Q
    ||||| || ||||| |||||||| || ||||||| ||||| |||||||||||||| | |||| | |  ||||||||||||||||||| |||||| | ||     
T  6216 gtttttcaaggtattcaatcgtgtcatgattttgggaaaatgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgg 6117  T
Q  480 gtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttga 530  Q
    |||||||||| ||| |||||||| ||||||  |||||||||||| ||||||    
T  6116 gtcgtacgcaccaatcgtgtcacaatttggacaaacgtgacacgattttga 6066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 396 - 528
Target Start/End: Complemental strand, 3009 - 2876
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaac 494  Q
    |||||||| |||||||||| ||||||||||| |||||||| | |||| | |  | ||||||||||||||||| |||||| | || |||||||||| |||     
T  3009 caatcgtgtcacgattttgggaaaacgtgacccgattttcaaacttgctgggtatgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaat 2910  T
Q  495 cgtgtcacgatttggcaaaacgtgacacgttttt 528  Q
    |||||||||||||||  |||||||||||| ||||    
T  2909 cgtgtcacgatttggacaaacgtgacacgatttt 2876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 528
Target Start/End: Original strand, 132795 - 132993
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    |||||||||||||||   | | |||| |||||||| |  ||| ||||||| || ||||||| || || |||||||||||||||||| | || |||||||     
T  132795 aatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagc-tggtttgcagtgtgtcaaatcgtgacacgattttgtggaatcgtgacat 132893  T
Q  429 gattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttt 527  Q
    ||||||| | |||| | |  | ||||||||||||||||| |||||| | || |||||||| ||||| |||| |||||||||| |||||||| |||| |||    
T  132894 gattttcaaacttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacgatttgg-aaaacgtggcacgattt 132992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 329 - 452
Target Start/End: Complemental strand, 149616 - 149487
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatcc------aatcgtgacacgattttgagaaaacg 422  Q
    |||||||||| |||||   | |||||||||||||| ||||||||| ||||||||||||  |||| | |      |||||||| ||||||||| ||||| |    
T  149616 aatcgtgacatgatttcataggcgtgtcacgatttggcaatgccgagagcatgttttgatgggtgttcttgttcaatcgtgatacgattttgggaaaatg 149517  T
Q  423 tgacacgattttcgacttgtttgacacgtt 452  Q
    || ||||||||||| |||| ||||||||||    
T  149516 tgtcacgattttcggcttgcttgacacgtt 149487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 357 - 528
Target Start/End: Original strand, 36376 - 36546
Alignment:
Q  357 acgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttc-gacttgtttgacacgttttc 455  Q
    ||||||| | |||| ||||||| || |||||||||| || ||||||| |||||||||| ||||||||||||| ||||||  ||||| | |  ||||||||    
T  36376 acgattttgtaatgtcgtgagc-tggtttgcagggtgtcaaatcgtggcacgattttgtgaaaacgtgacacaattttcaaacttgctgggtacgttttc 36474  T
Q  456 aggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttttt 528  Q
    ||||||||||| |||||| | || |||||||||| ||| | || |||||||||| |||||||| |||| ||||    
T  36475 aggataaggttggtcgtaccttgggtcgtacgcaccaatcatggcacgatttgg-aaaacgtggcacgatttt 36546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 329 - 528
Target Start/End: Original strand, 43477 - 43675
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    |||||||||||||||   | | |||| |||||||| | |||| ||||||| || ||| |||||| || |||||||  ||||||||| |||| |||||||     
T  43477 aatcgtgacacgattgtggcatcgtgacacgattttgtaatgtcgtgagc-tggtttacagggtgtcaaatcgtggtacgattttgtgaaatcgtgacat 43575  T
Q  429 gattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttt 527  Q
    ||||||| | |||| | |  | ||||||||||||||||| |||||| | || |||||| | ||||| |||| |||||||||| |||||||| |||| |||    
T  43576 gattttcaaacttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtatgtatcaatcgtggcacgatttgg-aaaacgtggcacgattt 43674  T

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Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 383 - 528
Target Start/End: Complemental strand, 45727 - 45582
Alignment:
Q  383 tttgcagggtatccaatcgtgacacgattttgagaaaacgtgacacgattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagt 481  Q
    |||||||||| || ||||||| ||||||| || |||| ||||||||||||||| | |||| | |  | ||||||||||||||||| |||||| | || ||    
T  45727 tttgcagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggctaagttttcaggataaggttggtcgtaccttgggt 45628  T
Q  482 cgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgttttt 528  Q
    |||||  ||||| |||| |||||||||| |||||||| |||| ||||    
T  45627 cgtacatatcaatcgtgacacgatttgg-aaaacgtggcacgatttt 45582  T

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Target: scaffold0466 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 529
Target Start/End: Original strand, 6820 - 6929
Alignment:
Q  421 cgtgacacgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttg-gcaaaacgtga 519  Q
    ||||||||||||||| ||||| | |  ||||||||||||||||||| || ||| | || |||||||||| ||||| |||||||||||| | |||||||||    
T  6820 cgtgacacgattttcaacttgctaggaacgttttcaggataaggttggttgtaccttgggtcgtacgcaccaaccatgtcacgatttgtggaaaacgtga 6919  T
Q  520 cacgtttttg 529  Q
     ||| |||||    
T  6920 tacgattttg 6929  T

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Target: scaffold0466; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 413
Target Start/End: Original strand, 6746 - 6833
Alignment:
Q  325 ttggaatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgatttt 413  Q
    ||||||||||||||||||||  | | |||| ||||||||  | | || ||||||||| |||||||||| ||||||||||||||||||||    
T  6746 ttggaatcgtgacacgattttggcatcgtggcacgatttt-ctaggcagtgagcatggtttgcagggtgtccaatcgtgacacgatttt 6833  T

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Target: scaffold1519 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 435
Target Start/End: Original strand, 525 - 630
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| ||||||||||  |||||||||||  |||| |||||||  | |||||||||||||| ||||| || ||||||||    
T  525 aatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagttt-gcagggtgccaaatcgtgacacgatcttgaggaatcgtgacac 623  T
Q  429 gattttc 435  Q
    |||||||    
T  624 gattttc 630  T

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Target: scaffold0188 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 435
Target Start/End: Original strand, 17474 - 17579
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| ||||||||||  ||||||||||| || ||||||||||  | |||||||||||||| ||| |||| |||||||     
T  17474 aatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacat 17572  T
Q  429 gattttc 435  Q
    |||||||    
T  17573 gattttc 17579  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 530
Target Start/End: Original strand, 434217 - 434354
Alignment:
Q  396 caatcgtgacacgattttgagaaaacgtgacacga-ttttcgacttgtttgacacg-ttttcaggataaggttagtcgtatcatgagtcgtacgcatcaa 493  Q
    ||||||||||||||||||| |||| |||||||||| |||| | |||| | | || | |||||||||||||||| |||||| | ||  |||||||||| ||    
T  434217 caatcgtgacacgattttgggaaatcgtgacacgattttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcataaa 434316  T
Q  494 ccgtgtcacgatt-tggcaaaacgtgacacgtttttga 530  Q
     |||| |||||||  || |||||||| |||| ||||||    
T  434317 tcgtggcacgattggggaaaaacgtggcacgattttga 434354  T

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Target: scaffold0140 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 508
Target Start/End: Original strand, 8024 - 8112
Alignment:
Q  421 cgtgacacgattttcga-cttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacgatttg 508  Q
    ||||||||||||||| | |||||| |  | ||||||||||||||||| |||||| | || |||||||| ||||| |||| |||||||||    
T  8024 cgtgacacgattttcaaacttgttggttaagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacgatttg 8112  T

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Target: scaffold0510 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 503
Target Start/End: Original strand, 1126 - 1300
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||||||  | | |||| |||||||| | |||  ||||||  || |||||||||| || |||||||  ||||||||| |||| ||||||||    
T  1126 aatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgagt-tggtttgcagggtgtcaaatcgtggtacgattttgtgaaatcgtgacac 1224  T
Q  429 ga-ttttcgacttgtttgacacgttttcaggataaggttagtcgtatcatgagtcgtacgcatcaaccgtgtcacg 503  Q
    || ||||  ||||| | |  | ||||||||||||||||| |||||| | |  |||||||| ||||| |||| ||||    
T  1225 gatttttaaacttgctggttaagttttcaggataaggttggtcgtaccttcggtcgtacgtatcaatcgtggcacg 1300  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 59872 - 59906
Alignment:
Q  4 aaattgtgtgagctctagccactcgactacttgac 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  59872 aaattgtgtgagctctagccactagactacttgac 59906  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 532
Target Start/End: Original strand, 114270 - 114409
Alignment:
Q  394 tccaatcgtgacacgattttgagaaaacgtgacacgattttcgacttgtttgac-acgttttcaggataaggttagtcgtatcatgagtcgtacgcatca 492  Q
    ||||||| ||||||||| ||| ||||||||||||||||||| | |||| | | | |  |||||||||||||||| || ||| | || |||||||||||||    
T  114270 tccaatcatgacacgatattgggaaaacgtgacacgatttt-ggcttgctgggcaaaattttcaggataaggttggtggtaccttgggtcgtacgcatca 114368  T
Q  493 accgtgtcacgatt--tggcaaaacgtgacacgtttttgatg 532  Q
      |||| |||||||  ||| ||||||||||||| ||| ||||    
T  114369 ctcgtgacacgattgatgg-aaaacgtgacacgatttcgatg 114409  T

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Target: scaffold0491 (Bit Score: 29; Significance: 0.0000008; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 329 - 433
Target Start/End: Complemental strand, 9265 - 9163
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| ||||||||||  ||||||||||| || ||||||||||  | |||||||||| || |||| |||| ||||||||    
T  9265 aatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacatga-tttgggaaatcgtgacac 9168  T
Q  429 gattt 433  Q
    |||||    
T  9167 gattt 9163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 329 - 433
Target Start/End: Complemental strand, 11710 - 11608
Alignment:
Q  329 aatcgtgacacgatttgtgaagcgtgtcacgatttcgcaatgccgtgagcatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgacac 428  Q
    ||||||||||||| ||  | | |||| |||||||||   ||||||||||| || ||||||||||  | ||||||||||||| |||| |||| ||||||||    
T  11710 aatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacga-tttgggaaatcgtgacac 11613  T
Q  429 gattt 433  Q
    |||||    
T  11612 gattt 11608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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