View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7494_high_35 (Length: 335)
Name: NF7494_high_35
Description: NF7494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7494_high_35 |
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Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 33455824 - 33456138
Alignment:
| Q |
1 |
gaagctctaccggtttacgaaacaaccggaatgttgtctgagatgttcaatttccctcacggcgcctcggcagccgaattattagaacaannnnnnnnnn |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33455824 |
gaagctctaccggtttacgaaacaaccggaatgttgtccgagatgttcaatttccctcacggcgcctcggcagccgaattattagaacagcagcagcagc |
33455923 |
T |
|
| Q |
101 |
nnnnnnnacaacaaatggcatcaacaagaacaccacaagcaccacatggaataggtaattccagtgactggtacggaaacagacaaacgatgttaacaga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33455924 |
agcaacaacaacaaatggcatcaacaagaacaccacaagcaccacatggaataggcaattccagtgactggtacggaaacagacaaacgatgttaacaga |
33456023 |
T |
|
| Q |
201 |
ttcaaaaaatcatcataataatcgtgacagtagcagcagcagcagcatatttcatcatcaaaatcatcatcagatgtcaaacattaatgctgagtcagca |
300 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33456024 |
ttcaaaaaatcatcataataatcgtgacagtagcagcagcagcagcatatttcatcatcaaaatcatcatcagatgtcaaacattaatgctgagtcagca |
33456123 |
T |
|
| Q |
301 |
gctgccatgcagctt |
315 |
Q |
| |
|
||||||||||||||| |
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| T |
33456124 |
gctgccatgcagctt |
33456138 |
T |
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