View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7494_high_55 (Length: 233)
Name: NF7494_high_55
Description: NF7494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7494_high_55 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 8 - 233
Target Start/End: Original strand, 33455609 - 33455834
Alignment:
| Q |
8 |
aagaatatcatcatcaccagcaccaaaaccaccaccagcaaggaatcttcgccttctcgaacggattcgagagatcgaacactccagaaaacagcaatcc |
107 |
Q |
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| T |
33455609 |
aagattatcatcatcaccaccaccagaaccaccaccagcaaggaatcttcgccttctcgaacggattcgagagatcgaacactccagaaaacaacaatcc |
33455708 |
T |
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| Q |
108 |
acaccagcaacaacagcaaattcaaagagacaaagtgagaattcaagacttcgactcacaacaaccaccacaaccaccgccgccaccactaataggcaac |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
33455709 |
acaccagcaacaacagcaaattcaaagagacaaagtgagaattcaagacttcgactcacaacaaccaccacaaccaccgccgccgccactaataggcaac |
33455808 |
T |
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| Q |
208 |
atagaagaagaacaagaagctctacc |
233 |
Q |
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|||||||||||||||||||||||||| |
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| T |
33455809 |
atagaagaagaacaagaagctctacc |
33455834 |
T |
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