View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7494_high_59 (Length: 224)
Name: NF7494_high_59
Description: NF7494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7494_high_59 |
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Alignment Details
Target: chr8 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 79 - 206
Target Start/End: Original strand, 39724189 - 39724316
Alignment:
| Q |
79 |
aatagtacattaatagctggttaccaatgtactagactactagtcgttagcacagaaataattcattagaggtatatatgacaacataataaaatgaaca |
178 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39724189 |
aatagtacattaatagctggttaccaatgtactagactactagtagtaagcacataaataattcattagaggtatatatgacaacataataaaatgaaca |
39724288 |
T |
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| Q |
179 |
actacaggtataaaaacaaggacaaaca |
206 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
39724289 |
actacaggtataaaaacaaggacaaaca |
39724316 |
T |
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