View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7494_low_34 (Length: 348)

Name: NF7494_low_34
Description: NF7494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7494_low_34
NF7494_low_34
[»] chr4 (23 HSPs)
chr4 (13-329)||(32123999-32124315)
chr4 (24-135)||(3465586-3465695)
chr4 (45-135)||(35451104-35451193)
chr4 (22-140)||(48512199-48512316)
chr4 (22-140)||(49280647-49280763)
chr4 (34-136)||(51077880-51077981)
chr4 (22-107)||(32885689-32885773)
chr4 (52-139)||(54264958-54265046)
chr4 (22-129)||(36008275-36008381)
chr4 (33-140)||(41003150-41003255)
chr4 (74-141)||(55485803-55485869)
chr4 (36-135)||(56314776-56314873)
chr4 (74-140)||(9285637-9285702)
chr4 (22-140)||(17859779-17859895)
chr4 (22-140)||(20753103-20753219)
chr4 (22-140)||(52560765-52560881)
chr4 (22-140)||(55656086-55656202)
chr4 (22-140)||(56546427-56546543)
chr4 (26-138)||(12585537-12585649)
chr4 (34-103)||(40150485-40150554)
chr4 (22-107)||(47017956-47018040)
chr4 (34-103)||(52031219-52031288)
chr4 (22-130)||(12820393-12820500)
[»] chr2 (20 HSPs)
chr2 (22-130)||(11133076-11133183)
chr2 (22-113)||(10262740-10262830)
chr2 (72-140)||(20942085-20942154)
chr2 (22-140)||(3179325-3179441)
chr2 (61-130)||(18089768-18089838)
chr2 (22-140)||(29664603-29664720)
chr2 (24-135)||(3037605-3037715)
chr2 (22-140)||(580761-580877)
chr2 (79-140)||(35352380-35352442)
chr2 (22-135)||(2114418-2114529)
chr2 (64-135)||(11837031-11837101)
chr2 (47-97)||(16261357-16261407)
chr2 (22-140)||(17154650-17154766)
chr2 (22-140)||(22538540-22538656)
chr2 (22-128)||(30474185-30474289)
chr2 (34-140)||(45523678-45523782)
chr2 (57-102)||(19843378-19843423)
chr2 (52-135)||(1244599-1244683)
chr2 (45-113)||(9520831-9520899)
chr2 (22-86)||(26807115-26807178)
[»] chr7 (27 HSPs)
chr7 (22-140)||(43635589-43635707)
chr7 (22-135)||(21285336-21285448)
chr7 (22-130)||(4169076-4169183)
chr7 (52-139)||(32309125-32309213)
chr7 (45-140)||(29658250-29658344)
chr7 (36-77)||(29990320-29990361)
chr7 (34-135)||(30644182-30644281)
chr7 (22-135)||(49012399-49012510)
chr7 (36-140)||(5787476-5787578)
chr7 (20-84)||(19356131-19356195)
chr7 (22-140)||(14967611-14967728)
chr7 (22-140)||(15397087-15397204)
chr7 (22-140)||(17900857-17900973)
chr7 (22-140)||(22965936-22966052)
chr7 (26-140)||(33202532-33202645)
chr7 (22-135)||(37410462-37410575)
chr7 (22-140)||(38451863-38451980)
chr7 (22-140)||(41139087-41139204)
chr7 (22-140)||(41417253-41417370)
chr7 (22-103)||(14818379-14818460)
chr7 (22-103)||(15265377-15265458)
chr7 (34-103)||(20527443-20527512)
chr7 (54-107)||(37995556-37995609)
chr7 (45-130)||(38792235-38792319)
chr7 (96-140)||(17997716-17997759)
chr7 (22-102)||(30741565-30741643)
chr7 (26-126)||(41507711-41507810)
[»] chr1 (24 HSPs)
chr1 (22-140)||(38019925-38020042)
chr1 (22-107)||(49251405-49251489)
chr1 (56-129)||(4288622-4288696)
chr1 (35-140)||(50859345-50859449)
chr1 (22-140)||(1721141-1721259)
chr1 (22-129)||(15774301-15774406)
chr1 (74-140)||(50501854-50501921)
chr1 (22-140)||(9527426-9527543)
chr1 (22-140)||(19793527-19793643)
chr1 (57-102)||(12148588-12148633)
chr1 (45-129)||(11405479-11405562)
chr1 (22-130)||(42831948-42832054)
chr1 (22-140)||(9768785-9768903)
chr1 (52-129)||(4605830-4605907)
chr1 (22-140)||(8364386-8364502)
chr1 (22-140)||(21884576-21884692)
chr1 (22-140)||(43555852-43555968)
chr1 (74-135)||(4616925-4616985)
chr1 (22-103)||(29491470-29491551)
chr1 (28-140)||(50199452-50199564)
chr1 (24-136)||(11802002-11802112)
chr1 (74-134)||(32711128-32711187)
chr1 (22-102)||(43237774-43237853)
chr1 (93-141)||(50755415-50755462)
[»] chr6 (19 HSPs)
chr6 (22-107)||(26528568-26528652)
chr6 (22-135)||(35190764-35190875)
chr6 (22-140)||(4844144-4844262)
chr6 (22-141)||(12127886-12128003)
chr6 (22-140)||(22389728-22389844)
chr6 (22-107)||(7563586-7563670)
chr6 (22-103)||(29284118-29284199)
chr6 (22-130)||(12089098-12089204)
chr6 (22-140)||(6530182-6530299)
chr6 (56-138)||(30668162-30668245)
chr6 (22-135)||(16251506-16251617)
chr6 (22-103)||(21507215-21507295)
chr6 (48-107)||(5544302-5544361)
chr6 (74-140)||(26669635-26669702)
chr6 (22-84)||(10373596-10373657)
chr6 (22-140)||(30566059-30566175)
chr6 (22-107)||(5288355-5288439)
chr6 (22-107)||(9491745-9491829)
chr6 (20-140)||(25020506-25020624)
[»] chr5 (18 HSPs)
chr5 (22-130)||(2029116-2029222)
chr5 (22-140)||(23925544-23925660)
chr5 (22-107)||(33800894-33800978)
chr5 (34-130)||(1244715-1244809)
chr5 (22-137)||(11246473-11246588)
chr5 (34-140)||(34010548-34010654)
chr5 (22-140)||(5156897-5157014)
chr5 (22-140)||(29096286-29096402)
chr5 (22-140)||(18872522-18872636)
chr5 (48-107)||(18101959-18102018)
chr5 (52-130)||(31556848-31556927)
chr5 (48-131)||(34921101-34921183)
chr5 (22-140)||(843346-843462)
chr5 (22-140)||(29106016-29106132)
chr5 (22-135)||(27219546-27219657)
chr5 (22-103)||(37303934-37304015)
chr5 (56-140)||(41539348-41539433)
chr5 (34-135)||(42455377-42455476)
[»] chr3 (21 HSPs)
chr3 (34-130)||(43774197-43774292)
chr3 (22-140)||(36331704-36331821)
chr3 (22-140)||(24130560-24130678)
chr3 (34-140)||(43566774-43566878)
chr3 (13-135)||(49146076-49146196)
chr3 (22-107)||(45713481-45713565)
chr3 (54-140)||(24160504-24160591)
chr3 (56-135)||(27066644-27066722)
chr3 (22-69)||(31576511-31576558)
chr3 (34-140)||(44592013-44592117)
chr3 (22-140)||(9624983-9625100)
chr3 (45-135)||(13874817-13874906)
chr3 (22-140)||(33206758-33206874)
chr3 (22-107)||(41121872-41121957)
chr3 (52-137)||(42665904-42665990)
chr3 (22-140)||(47191373-47191490)
chr3 (45-130)||(362966-363050)
chr3 (48-140)||(6054201-6054294)
chr3 (22-107)||(16006516-16006600)
chr3 (22-135)||(35483270-35483381)
chr3 (22-103)||(52030121-52030202)
[»] chr8 (28 HSPs)
chr8 (22-140)||(13537289-13537406)
chr8 (22-140)||(13626837-13626954)
chr8 (22-140)||(7540465-7540582)
chr8 (22-140)||(37154514-37154631)
chr8 (52-140)||(22847238-22847327)
chr8 (34-110)||(13762519-13762594)
chr8 (22-106)||(18577114-18577197)
chr8 (89-140)||(39208845-39208897)
chr8 (22-130)||(43468693-43468799)
chr8 (54-140)||(220338-220425)
chr8 (54-140)||(689493-689580)
chr8 (54-140)||(733961-734048)
chr8 (54-140)||(857857-857944)
chr8 (46-129)||(13702341-13702423)
chr8 (22-93)||(21133543-21133614)
chr8 (22-101)||(29937211-29937289)
chr8 (45-140)||(33570407-33570501)
chr8 (22-140)||(15042343-15042459)
chr8 (52-134)||(33982220-33982301)
chr8 (22-103)||(2696533-2696614)
chr8 (22-107)||(9524958-9525042)
chr8 (22-107)||(24608493-24608577)
chr8 (22-107)||(26703900-26703984)
chr8 (51-140)||(36359696-36359784)
chr8 (22-107)||(37219506-37219590)
chr8 (22-140)||(12560033-12560150)
chr8 (44-140)||(14683899-14683993)
chr8 (74-129)||(24572838-24572894)
[»] scaffold0119 (1 HSPs)
scaffold0119 (74-140)||(1091-1158)
[»] scaffold1086 (1 HSPs)
scaffold1086 (22-140)||(2489-2605)


Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 13 - 329
Target Start/End: Original strand, 32123999 - 32124315
Alignment:
Q  13 aatatcacttgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaag 112  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |    
T  32123999 aatatcacttgagcataactcagttggtagggacaatgtattgttatgtgcaggggccagagttcaaacccgagagacctcacttattcaccttacaatg 32124098  T
Q  113 ttgaattctagtcactagactacttgactnnnnnnnnnnnnntatgacaatatctacgaagcattttaacgtaaatgactactttgaacataatgcacaa 212  Q
    |||||||| || |||||| ||||||||||             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32124099 ttgaattcaagccactaggctacttgactaaaaaaataaaaatatgacaatatctacgaagcattttaacgtaaatgactactttgaacataatgcacaa 32124198  T
Q  213 ttaaagactatcttaaaatattttaatatattgaatgactattatatgattactcgttatacatccaggaaccaaaatgatgattaccaaaatagcgttg 312  Q
    |||||||||||||||||||||||| | | ||||||| | ||||||||||||||| ||||||||||||| ||| |||||||| ||||||||||||||||||    
T  32124199 ttaaagactatcttaaaatattttgagacattgaattattattatatgattacttgttatacatccagaaactaaaatgattattaccaaaatagcgttg 32124298  T
Q  313 ctaaatggcacgacatg 329  Q
    |||||||||||||||||    
T  32124299 ctaaatggcacgacatg 32124315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 3465586 - 3465695
Alignment:
Q  24 agcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctag 123  Q
    ||||||||| ||||||||||| ||||| ||| |||| |||||||| | |||||| |||||| || ||| |||||||||||||||  ||| ||||||||||    
T  3465586 agcataactcagttggtagga-caatgcattattatatgcaggggccggagttcgaaccccggacaccccacttattcacctta-taaggtgaattctag 3465683  T
Q  124 tcactagactac 135  Q
     |||||||||||    
T  3465684 ccactagactac 3465695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 35451193 - 35451104
Alignment:
Q  45 acaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagactac 135  Q
    |||||| ||| |||| |||||||||| |||||| |||  | || |||||||||||||||||||  ||| |||||||||| |||||||||||    
T  35451193 acaatgcattattatatgcaggggtcggagttcgaactacggacacctcacttattcacctta-taagatgaattctagccactagactac 35451104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 48512199 - 48512316
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || |||||| ||| |||||| |||||||| ||||||||  || ||||  ||||| || ||| |||||||||||||||  ||| |||||| |    
T  48512199 tgagcatagctcagttggcagggacaatgcattgttatatgcaggggctagggttcgtaccccggacaccccacttattcacctta-taaggtgaatttt 48512297  T
Q  122 agtcactagactacttgac 140  Q
    || |||||||||| |||||    
T  48512298 agccactagactatttgac 48512316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 49280763 - 49280647
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    ||||||||||| | ||||||||| ||||| ||| |||| |||||||||| | |||  |||||  || |||||||||||||||||||  ||| ||||||||    
T  49280763 tgagcataactcaattggtagga-caatgaattattatatgcaggggtcggtgtttgaaccctggacacctcacttattcacctta-taaggtgaattct 49280666  T
Q  122 agtcactagactacttgac 140  Q
    |  |||||| |||||||||    
T  49280665 aaccactaggctacttgac 49280647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 51077880 - 51077981
Alignment:
Q  34 agttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagact 133  Q
    ||||||||||| ||||| ||| |||| |||||||||| |||||| || | |  | ||| ||||||||||||||| || | |||||||||| |||||||||    
T  51077880 agttggtagga-caatgcattattatatgcaggggtcggagttcgaatctcgaacaccccacttattcaccttataagggtgaattctagccactagact 51077978  T
Q  134 act 136  Q
    |||    
T  51077979 act 51077981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 32885689 - 32885773
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctta 107  Q
    |||||||| || ||||||||||| ||||| ||| |||| |||||||||| |||||| |||| | || ||| |||||||||||||||    
T  32885689 tgagcatagctcagttggtagga-caatgcattattatatgcaggggtcggagttcgaacctcggacaccccacttattcacctta 32885773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 54264958 - 54265046
Alignment:
Q  52 attgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagtcactagactacttga 139  Q
    |||||||| || ||||||||| ||||||||| |  | |||||||||||||||||| | |||| |||||||||| |||| | ||||||||    
T  54264958 attgttatatgtaggggtcagggttcaaacctcgaacacctcacttattcaccttgaaaaagatgaattctagccactgggctacttga 54265046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 36008275 - 36008381
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || |||||| ||| |||||| |||||||| |||||||| | | |||| ||||||  | ||| |||||||||||||||  ||| ||||||||    
T  36008275 tgagcatagctcagttggcagggacaatgcattgttatatgcaggggccggggttcgaaccccgaacaccccacttattcacctta-taaggtgaattct 36008373  T
Q  122 agtcacta 129  Q
    || |||||    
T  36008374 agccacta 36008381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 41003255 - 41003150
Alignment:
Q  33 tagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagac 132  Q
    ||||||| ||| |||||| |||||||| |||||||||  |||||| ||| || || ||| |||||||||||||||| ||| |||||||||  |||||| |    
T  41003255 tagttggcagggacaatgcattgttatatgcaggggtt-gagttcgaactccggacaccccacttattcaccttac-aagatgaattctaaccactaggc 41003158  T
Q  133 tacttgac 140  Q
    ||| ||||    
T  41003157 tacctgac 41003150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 55485869 - 55485803
Alignment:
Q  74 gttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagactacttgact 141  Q
    |||| ||||||||| ||| |||||||||| ||||||| || ||||| ||| |||||||||||||||||    
T  55485869 gttcgaaccccagacaccccacttattcatcttacaatgt-gaattatagccactagactacttgact 55485803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 56314776 - 56314873
Alignment:
Q  36 ttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagactac 135  Q
    ||||||||| ||||| ||| |||| |||||||||||| |||| |||| | || ||| ||||||||||| ||| |||| |||||||||| |||||| ||||    
T  56314776 ttggtagga-caatgcattattatatgcaggggtcagggttcgaaccacggacaccacacttattcacatta-aaaggtgaattctagccactaggctac 56314873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 9285702 - 9285637
Alignment:
Q  74 gttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagactacttgac 140  Q
    |||| ||||||||| ||| |||||||| |||||| || || ||||||||| ||||||||||||||||    
T  9285702 gttcgaaccccagacaccccacttattaaccttataaggt-gaattctagccactagactacttgac 9285637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 17859779 - 17859895
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || ||||||||||| ||||| ||| ||||  | ||||| | |||||| ||||||  | |||||||||||||||||||  ||| ||||||||    
T  17859779 tgagcatagctcagttggtagga-caatgcattattatacgtaggggccggagttcgaaccccgaacacctcacttattcacctta-taaggtgaattct 17859876  T
Q  122 agtcactagactacttgac 140  Q
    || |||||| |||| ||||    
T  17859877 agccactaggctacctgac 17859895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 20753219 - 20753103
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || |||||||||||| |||| ||| |||| || ||||| | | |||| |||||| || ||| |||||||||||||||  ||| ||||||||    
T  20753219 tgagcatagctcagttggtaggaa-aatgcattattatatgtaggggccggggttcgaaccccggacaccacacttattcacctta-taaggtgaattct 20753122  T
Q  122 agtcactagactacttgac 140  Q
    || |||||| |||| ||||    
T  20753121 agccactaggctacctgac 20753103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 52560765 - 52560881
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || | ||||||||| ||||| ||| |||| |||||||| | | |||| |||| || | || ||||||||||||||||  ||| ||||||||    
T  52560765 tgagcatagctcaattggtagga-caatgcattattatatgcaggggccggggttcgaaccacatacacttcacttattcacctta-taaggtgaattct 52560862  T
Q  122 agtcactagactacttgac 140  Q
    || ||||||||||| ||||    
T  52560863 agccactagactacctgac 52560881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 55656202 - 55656086
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    ||||||||||| ||||||| ||| ||||  ||| |||| |||||||| | ||||||||| ||| || |||  ||||||||||||||  ||| ||||||||    
T  55656202 tgagcataactcagttggttgga-caatacattattatatgcaggggccggagttcaaatcccggacaccctacttattcacctta-taagatgaattct 55656105  T
Q  122 agtcactagactacttgac 140  Q
    || ||||||| ||| ||||    
T  55656104 agccactagattacctgac 55656086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 56546543 - 56546427
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || | ||||||||| ||||| ||| |||| |||||||| | | |||| |||| |||| ||| ||||||||||| ||| |||| ||||||||    
T  56546543 tgagcatagctcaattggtagga-caatgcattattatatgcaggggccggggttcgaaccacagacaccccacttattcactttaaaaag-tgaattct 56546446  T
Q  122 agtcactagactacttgac 140  Q
    || |||||| |||| ||||    
T  56546445 agccactaggctacctgac 56546427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 12585649 - 12585537
Alignment:
Q  26 cataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagt 124  Q
    ||||||| |||||| ||| ||| || |||||||| || | ||| | |||||| ||||||  | |||||||||||||| ||| | |||| ||||||||||     
T  12585649 cataactcagttggcagggaca-tgcattgttatatgtaagggccggagttcgaaccccgaacacctcacttattcatcttgaaaaaggtgaattctagc 12585551  T
Q  125 cactagactacttg 138  Q
    ||||||||||||||    
T  12585550 cactagactacttg 12585537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 40150485 - 40150554
Alignment:
Q  34 agttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcac 103  Q
    |||||| |||||||||| ||| |||| | |||||||| | |||| |||||| || |||||||||||||||    
T  40150485 agttggcaggaacaatgcattattatatacaggggtcggggttcgaaccccggacacctcacttattcac 40150554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 47018040 - 47017956
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctta 107  Q
    |||||||| || ||||||||||| ||||| ||| |||| |||||||| | | |||| |||||| || ||| |||||||||||||||    
T  47018040 tgagcatagctcagttggtagga-caatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcacctta 47017956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 52031219 - 52031288
Alignment:
Q  34 agttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcac 103  Q
    |||||| |||||||||| |||  ||| |||||||||| | |||| ||||||||| ||| |||||||||||    
T  52031219 agttggcaggaacaatgcattagtatatgcaggggtcggggttcgaaccccagacaccccacttattcac 52031288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 12820500 - 12820393
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || |||||| ||  |||||| |||||||| |||||||||| | |||  |||||  || ||| |||||||||||||||  ||| ||||||||    
T  12820500 tgagcatagctcagttggcagagacaatgcattgttatatgcaggggtcggggttagaaccctggacaccccacttattcacctta-taaggtgaattct 12820402  T
Q  122 agtcactag 130  Q
    || ||||||    
T  12820401 agccactag 12820393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 11133076 - 11133183
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || |||||||||| |||||| |||||||| |||||||||| | |||| |||||| || ||| |||||||||||||||  ||| ||||||||    
T  11133076 tgagcatagctcagttggtagggacaatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcacctta-taaggtgaattct 11133174  T
Q  122 agtcactag 130  Q
    || ||||||    
T  11133175 agccactag 11133183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 10262740 - 10262830
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagt 113  Q
    ||||||||||| ||||||||||| ||||| ||| |||| |||||||||| | |||| ||||||||| ||| ||||||||||||||| |||||    
T  10262740 tgagcataactcagttggtagga-caatgcattattatatgcaggggtcggggttcgaaccccagacaccccacttattcaccttataaagt 10262830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 20942154 - 20942085
Alignment:
Q  72 gagttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagtcactagactacttgac 140  Q
    |||||| ||||||||| |||||||||||||||||| | |||  |||||||||||||||||||||||||||    
T  20942154 gagttcgaaccccagacacctcacttattcaccttgaaaaaagtgaattctagtcactagactacttgac 20942085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 3179325 - 3179441
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    ||||||||||| ||||||||| ||||||| ||| |||| ||||||||||   |||| |||| |||| ||| |||||||||||||||  ||| ||||||||    
T  3179325 tgagcataactcagttggtag-aacaatgcattattatatgcaggggtcgaggttcgaacctcagacaccccacttattcacctta-taaggtgaattct 3179422  T
Q  122 agtcactagactacttgac 140  Q
    || |||||| |||| ||||    
T  3179423 agccactaggctacctgac 3179441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 18089768 - 18089838
Alignment:
Q  61 tgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagtcactag 130  Q
    |||||||| |||||||| ||||||||| |||||||||||||||||| | |||  |||||||||||||||||    
T  18089768 tgcaggggccagagttcgaaccccagacacctcacttattcaccttgaaaaacgtgaattctagtcactag 18089838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 29664603 - 29664720
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || | |||| ||| |||||| |||||||| |||||||||| | ||||||| ||| || ||| |||||||||| |||| || || |||||||    
T  29664603 tgagcatagctcaattggcagggacaatgcattgttatatgcaggggtcggggttcaaatcccggacaccccacttattcatcttataaggt-gaattct 29664701  T
Q  122 agtcactagactacttgac 140  Q
    || ||||||||||| ||||    
T  29664702 agccactagactacctgac 29664720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 3037715 - 3037605
Alignment:
Q  24 agcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctag 123  Q
    ||||||||| ||||||  || |||||| |||||||| |||||||| | | |||| |||||| || ||| |||||||||||||||  ||| ||||||||||    
T  3037715 agcataactcagttggctgggacaatgcattgttatatgcaggggccggggttcgaaccccggacaccccacttattcacctta-taaggtgaattctag 3037617  T
Q  124 tcactagactac 135  Q
     |||||| ||||    
T  3037616 gcactaggctac 3037605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 580877 - 580761
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || ||||||||||| ||||| ||| |||| |||||||| | | |||| |||||| || ||| |||||||||||||||  ||| ||||||||    
T  580877 tgagcatagctcagttggtagga-caatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcacctta-taagatgaattct 580780  T
Q  122 agtcactagactacttgac 140  Q
    || |||||| |||| ||||    
T  580779 agccactaggctacctgac 580761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 35352442 - 35352380
Alignment:
Q  79 aaccccagagacctcacttattcaccttacaaagt-tgaattctagtcactagactacttgac 140  Q
    ||||||||| ||| ||||||||||||||  ||| | |||||||||||||||||||||||||||    
T  35352442 aaccccagacaccccacttattcaccttgaaaaatgtgaattctagtcactagactacttgac 35352380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 2114529 - 2114418
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || ||||||||| ||||||| ||| |||| || ||||||| | |||| |||||| || |||||| ||||||||||||  ||| ||||||||    
T  2114529 tgagcatagctcagttggtag-aacaatgcattattatatgtaggggtcggggttcgaaccccggacacctcatttattcacctta-taaggtgaattct 2114432  T
Q  122 agtcactagactac 135  Q
    || |||| ||||||    
T  2114431 agccactggactac 2114418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 135
Target Start/End: Original strand, 11837031 - 11837101
Alignment:
Q  64 aggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagactac 135  Q
    ||||||| | |||| |||||| || ||||||||||||||||||| |||| |||||||||| |||||| ||||    
T  11837031 aggggtcggggttcgaaccccggacacctcacttattcaccttataaag-tgaattctagccactaggctac 11837101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 16261357 - 16261407
Alignment:
Q  47 aatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcactt 97  Q
    |||| |||||||| ||||||||||||||||| ||||||||| ||| |||||    
T  16261357 aatgcattgttatatgcaggggtcagagttcgaaccccagacaccccactt 16261407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 17154650 - 17154766
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||||||  |||||||||| ||||| ||| |||| |||||||| | | |||| |||||| || ||| |||||||||||||||  ||| ||| ||||    
T  17154650 tgagcataactcggttggtagga-caatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcacctta-taaggtgagttct 17154747  T
Q  122 agtcactagactacttgac 140  Q
    || |||||| |||| ||||    
T  17154748 agccactaggctacctgac 17154766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 22538540 - 22538656
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    ||||| ||||| ||||||||||| ||||| ||| |||| |||||||||  | |||| || |||  | |||||||||||||||||||  ||| ||||||||    
T  22538540 tgagcctaactcagttggtagga-caatgcattattatatgcaggggttggggttcgaatcccgaacacctcacttattcacctta-taaggtgaattct 22538637  T
Q  122 agtcactagactacttgac 140  Q
    || |||||| |||| ||||    
T  22538638 agccactaggctacctgac 22538656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 30474289 - 30474185
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || ||||||||||| ||||| ||| |||| |||||||| |   |||| ||||||||| ||| |||||||||||||||  ||| ||||||||    
T  30474289 tgagcatagctcagttggtagga-caatgcattattatatgcaggggccgaggttcgaaccccagacaccccacttattcacctta-taaggtgaattct 30474192  T
Q  122 agtcact 128  Q
    || ||||    
T  30474191 agccact 30474185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 45523678 - 45523782
Alignment:
Q  34 agttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagact 133  Q
    ||||||||||| ||||||||  |||| |||||||||| | |||| ||||||| | ||||||| |||||||||||  ||| |||||||||  ||||| |||    
T  45523678 agttggtagga-caatgtataattatatgcaggggtcggggttcgaaccccaaacacctcacctattcacctta-taaggtgaattctaaccactaaact 45523775  T
Q  134 acttgac 140  Q
    || ||||    
T  45523776 acctgac 45523782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 19843423 - 19843378
Alignment:
Q  57 tatgtgcaggggtcagagttcaaaccccagagacctcacttattca 102  Q
    |||||||||||||||| |||| ||||| ||| ||||||||||||||    
T  19843423 tatgtgcaggggtcagggttcgaaccctagacacctcacttattca 19843378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 1244599 - 1244683
Alignment:
Q  52 attgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagtcactagactac 135  Q
    |||| ||| |||||||||  | |||| |||||| || ||| |||||||||||||| | |||| |||||||||| |||||||||||    
T  1244599 attgctatatgcaggggtgggggttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattctagccactagactac 1244683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 9520831 - 9520899
Alignment:
Q  45 acaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagt 113  Q
    |||||| |||||||| || |||||| ||||||| ||||||  | ||| ||||||||||||||| |||||    
T  9520831 acaatgcattgttatatgtaggggttagagttcgaaccccgaacaccccacttattcaccttaaaaagt 9520899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 26807178 - 26807115
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccag 86  Q
    ||||||||||| |||||||||| |||||| ||| |||| |||||||| ||| |||| ||||||||    
T  26807178 tgagcataactcagttggtagg-acaatgcattattatatgcaggggccagggttcgaaccccag 26807115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 43635589 - 43635707
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaa-gttgaattc 120  Q
    ||||||||||| |||||| || |||| || |||||||| ||||| |||| | |||| |||||| || ||| ||||||||||||||||||| | |||||||    
T  43635589 tgagcataactcagttggcagaaaca-tgcattgttatatgcagcggtcggggttcgaaccccggacaccccacttattcaccttacaaagggtgaattc 43635687  T
Q  121 tagtcactagactacttgac 140  Q
    ||| ||||| ||||||||||    
T  43635688 tagccactaaactacttgac 43635707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 21285448 - 21285336
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || |||||| ||| |||||| |||||||| |||||||| | | |||| |||||| || ||| |||||||||||||||  ||| ||||||||    
T  21285448 tgagcatagctcagttggcagggacaatgcattgttatatgcaggggccggggttcgaaccccggacaccccacttattcacctta-taaggtgaattct 21285350  T
Q  122 agtcactagactac 135  Q
    || |||||| ||||    
T  21285349 agccactaggctac 21285336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 4169076 - 4169183
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || |||||| ||| ||||||||||||||| |||| ||| | | |||  |||||| || ||| ||||||||||||||| |||| ||||||||    
T  4169076 tgagcatagctcagttggcagggacaatgtattgttatatgcaagggccggggtttgaaccccggacaccccacttattcaccttataaag-tgaattct 4169174  T
Q  122 agtcactag 130  Q
    || ||||||    
T  4169175 agccactag 4169183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 32309213 - 32309125
Alignment:
Q  52 attgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagt-tgaattctagtcactagactacttga 139  Q
    |||||||| |||||||||| |||||| || | |||| ||| || |||||||||||| ||| | |||||||||| |||||||||||||||    
T  32309213 attgttatatgcaggggtcggagttcgaatctcagacaccccagttattcaccttaaaaaatgtgaattctagccactagactacttga 32309125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 140
Target Start/End: Complemental strand, 29658344 - 29658250
Alignment:
Q  45 acaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagactacttgac 140  Q
    |||||| |||||||| |||||||| | | |||| |||||| || ||| |||||||||||||||  ||| |||||||||| |||||| |||||||||    
T  29658344 acaatgcattgttatatgcaggggccggggttcgaaccccggacaccccacttattcacctta-taaggtgaattctagccactaggctacttgac 29658250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 29990361 - 29990320
Alignment:
Q  36 ttggtaggaacaatgtattgttatgtgcaggggtcagagttc 77  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  29990361 ttggtaggaacaatgtattgttatatgcaggggttagagttc 29990320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 30644182 - 30644281
Alignment:
Q  34 agttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagact 133  Q
    ||||||||||| ||||| ||| |||| |||||||| | | |||| ||||||||| ||| |||||||||||||||  ||| |||||||||| |||||| ||    
T  30644182 agttggtagga-caatgcattattatatgcaggggccggtgttcgaaccccagacaccccacttattcacctta-taaggtgaattctagccactagtct 30644279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 49012399 - 49012510
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || ||||||||||| ||||| ||| |||| || ||||||||| |||||||  ||||| |||  |||||||||||||  |||| |||||| |    
T  49012399 tgagcatagctcagttggtagga-caatgcattattatatgaaggggtcagggttcaaattccagacaccctacttattcacctt-taaagatgaattat 49012496  T
Q  122 agtcactagactac 135  Q
    | ||||||||||||    
T  49012497 aatcactagactac 49012510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 140
Target Start/End: Original strand, 5787476 - 5787578
Alignment:
Q  36 ttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagactac 135  Q
    ||||||||| ||||| ||| |||| |||||||| | | |||  ||||||| | ||| ||||||||||||||| || || |||||||||||||||| ||||    
T  5787476 ttggtagga-caatgcattattatatgcaggggccggggtttgaaccccaaacaccccacttattcaccttataaggt-gaattctagtcactaggctac 5787573  T
Q  136 ttgac 140  Q
    |||||    
T  5787574 ttgac 5787578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 19356131 - 19356195
Alignment:
Q  20 cttgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaacccc 84  Q
    |||||||||||| ||||||  | ||||||||||||||||| ||||| || || ||||||||||||    
T  19356131 cttgagcataacatagttgacatgaacaatgtattgttatatgcagaggccaaagttcaaacccc 19356195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 14967728 - 14967611
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcactt-attcaccttacaaagttgaattc 120  Q
    ||||||||||| ||||||||||| ||||| ||| |||| || ||||||| | |||  |||| |||| ||||||||| ||||| |||| || || ||||||    
T  14967728 tgagcataactcagttggtagga-caatgcattattatatgtaggggtcggggtttgaacctcagacacctcactttattcaacttataaggt-gaattc 14967631  T
Q  121 tagtcactagactacttgac 140  Q
    ||| ||||||||||| ||||    
T  14967630 tagccactagactacctgac 14967611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 15397204 - 15397087
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcactt-attcaccttacaaagttgaattc 120  Q
    ||||||||||| ||||||||||| ||||| ||| |||| || ||||||| | |||  |||| |||| ||||||||| ||||| |||| || || ||||||    
T  15397204 tgagcataactcagttggtagga-caatgcattattatatgtaggggtcggggtttgaacctcagacacctcactttattcaacttataaggt-gaattc 15397107  T
Q  121 tagtcactagactacttgac 140  Q
    ||| ||||||||||| ||||    
T  15397106 tagccactagactacctgac 15397087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 17900973 - 17900857
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| ||||||||||||| |||||| ||| |||| |||||||| | | | || |||||| ||  || ||||||||| |||||  ||| ||||||||    
T  17900973 tgagcatagcttagttggtagg-acaatgcattattatatgcaggggccggggctcgaaccccggactccccacttattctcctta-taaggtgaattct 17900876  T
Q  122 agtcactagactacttgac 140  Q
    || |||||| |||||||||    
T  17900875 agccactaggctacttgac 17900857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 22966052 - 22965936
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || | ||||||||| ||||| ||| |||| |||||||| |   |||| ||||||||| ||| |||||||||||||||  ||| ||||||||    
T  22966052 tgagcatagctcaattggtagga-caatgcattattatatgcaggggccgaggttcgaaccccagacaccccacttattcacctta-taaggtgaattct 22965955  T
Q  122 agtcactagactacttgac 140  Q
    |  ||||||||||| ||||    
T  22965954 aaccactagactacatgac 22965936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 140
Target Start/End: Complemental strand, 33202645 - 33202532
Alignment:
Q  26 cataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtc 125  Q
    ||||||| |||||| ||| ||| ||||||||||| | |||||| | | |||| |||||| || ||| |||||||||| ||||  ||| |||||||||| |    
T  33202645 cataactcagttggcagggacattgtattgttatatacaggggccggggttcgaaccccggacaccccacttattcatctta-taaggtgaattctagcc 33202547  T
Q  126 actagactacttgac 140  Q
    ||||| |||| ||||    
T  33202546 actaggctacctgac 33202532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 37410575 - 37410462
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaa-gttgaattc 120  Q
    |||||||| || |||||||| | ||| || |||||||| |||||||||||  |||| ||| || || ||||||||||||| ||||| ||| |  ||||||    
T  37410575 tgagcatagctcagttggtaaggaca-tgcattgttatatgcaggggtcaaggttcgaactccggacacctcacttattctccttaaaaagggagaattc 37410477  T
Q  121 tagtcactagactac 135  Q
    ||| |||||||||||    
T  37410476 tagccactagactac 37410462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 38451863 - 38451980
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || |||||  ||| |||||| |||||||| |||||||| | | |||| || ||| || ||| ||||||||||| |||  ||| ||||||||    
T  38451863 tgagcatagctcagttgacagggacaatgcattgttatatgcaggggccggggttcgaatcccggacaccccacttattcacatta-taaggtgaattct 38451961  T
Q  122 agtcactagactacttgac 140  Q
    || ||||||||||| ||||    
T  38451962 agccactagactacctgac 38451980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 41139087 - 41139204
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || |||||| ||| |||||| ||| |||| |||||||||| | |||| || ||| || || |||||||||||| ||| |||||  | ||||    
T  41139087 tgagcatagctcagttggcagggacaatgcattattatatgcaggggtcggggttcgaatcccggacacttcacttattcacttta-aaagtgaatttct 41139185  T
Q  122 agtcactagactacttgac 140  Q
    || |||||| |||||||||    
T  41139186 agccactaggctacttgac 41139204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 41417370 - 41417253
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || |||||| ||||||| || ||  |||| |||||||||| | |||| ||||||||| ||| ||||||||||| ||| |||||  | || |    
T  41417370 tgagcatagctcagttggcaggaacagtgcatcattatatgcaggggtcggggttcgaaccccagacaccccacttattcacttta-aaagtgaattttt 41417272  T
Q  122 agtcactagactacttgac 140  Q
    || || |||||||||||||    
T  41417271 agccattagactacttgac 41417253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 14818460 - 14818379
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcac 103  Q
    |||||||| || |||||| ||| ||| || ||| |||| |||||||||| | |||||||||||| | ||| |||||||||||    
T  14818460 tgagcatagctcagttggcagggacagtgcattattatatgcaggggtcggggttcaaaccccaaacaccccacttattcac 14818379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 15265458 - 15265377
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcac 103  Q
    |||||||| || |||||| ||| ||| || ||| |||| |||||||||| | |||||||||||| | ||| |||||||||||    
T  15265458 tgagcatagctcagttggcagggacagtgcattattatatgcaggggtcggggttcaaaccccaaacaccccacttattcac 15265377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 20527512 - 20527443
Alignment:
Q  34 agttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcac 103  Q
    |||||| ||| |||||| |||||||| |||||||| | |||||| ||||||  | |||||||||||||||    
T  20527512 agttggcagggacaatgcattgttatatgcaggggccggagttcgaaccccgaacacctcacttattcac 20527443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 107
Target Start/End: Complemental strand, 37995609 - 37995556
Alignment:
Q  54 tgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctta 107  Q
    |||||| |||||||| | | |||||||||||||| ||||||||| |||||||||    
T  37995609 tgttatatgcaggggccggggttcaaaccccagacacctcacttgttcacctta 37995556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 38792235 - 38792319
Alignment:
Q  45 acaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactag 130  Q
    |||||| ||| |||| ||||||||||||||||  |||||| || |||  ||||||||||||||  ||| |||||||||| ||||||    
T  38792235 acaatgcattattatatgcaggggtcagagtttgaaccccggacaccctacttattcacctta-taaggtgaattctagccactag 38792319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 17997759 - 17997716
Alignment:
Q  96 ttattcaccttacaaagttgaattctagtcactagactacttgac 140  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||    
T  17997759 ttattcacctta-aaaggtgaattctagccactagactacttgac 17997716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 30741565 - 30741643
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattca 102  Q
    ||||||||||| |||||||||| | ||||||||||||| |||||||| | | |||| |||||| || ||| ||||||||||    
T  30741565 tgagcataactcagttggtagg-ataatgtattgttatatgcaggggccggtgttcgaaccccggacacc-cacttattca 30741643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 41507810 - 41507711
Alignment:
Q  26 cataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtc 125  Q
    ||||||| ||||||||||||||||| |||||||| |  | ||||| |||||| |||| || | ||| || |||||||| |||  ||| ||||||||||||    
T  41507810 cataactcagttggtaggaacaatgcattgttatatataagggtcggagttcgaacctcaaacaccccatttattcacttta-taagatgaattctagtc 41507712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 5e-16; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 38020042 - 38019925
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttc-aaaccccagagacctcacttattcaccttacaaagttgaattc 120  Q
    |||||||| || ||||||||||| ||||| ||| |||| |||||||| | |||||| |||||||||| ||| ||||||||||||||| |||| |||||||    
T  38020042 tgagcatagctcagttggtagga-caatgcattattatatgcaggggccggagttcgaaaccccagacaccccacttattcaccttataaag-tgaattc 38019945  T
Q  121 tagtcactagactacttgac 140  Q
    ||| |||||| |||| ||||    
T  38019944 tagccactaggctacctgac 38019925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 49251489 - 49251405
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctta 107  Q
    ||||||||||| ||||||||||| ||||| ||| |||| |||||||||| | |||| ||||||||| ||| |||||||||||||||    
T  49251489 tgagcataactcagttggtagga-caatgcattattatatgcaggggtcggggttcgaaccccagacaccccacttattcacctta 49251405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 4288622 - 4288696
Alignment:
Q  56 ttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagtcacta 129  Q
    |||| ||||||||||||||||| ||||||||| |||||| ||||||||||| | |||| |||||||||| |||||    
T  4288622 ttatatgcaggggtcagagttcgaaccccagacacctcatttattcaccttaaaaaagatgaattctagccacta 4288696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 140
Target Start/End: Complemental strand, 50859449 - 50859345
Alignment:
Q  35 gttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagacta 134  Q
    ||||||||  |||||| |||| ||| |||||||| | | ||||||||||| || ||| ||| ||||||||||| |||| |||||||||| |||||| |||    
T  50859449 gttggtagagacaatgcattgatatatgcaggggccggggttcaaaccccggacaccccacatattcacctta-aaaggtgaattctagccactaggcta 50859351  T
Q  135 cttgac 140  Q
    ||||||    
T  50859350 cttgac 50859345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 1721141 - 1721259
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattc 120  Q
    |||||||| || |||||||||||||| || |||||||| |||||||| | |  ||| |||||| || |||||||||||||||||| | |||| |||||||    
T  1721141 tgagcatagctcagttggtaggaaca-tgcattgttatatgcaggggccgggtttcgaaccccggacacctcacttattcaccttaaaaaaggtgaattc 1721239  T
Q  121 tagtcactagactacttgac 140  Q
    ||| |  ||| |||||||||    
T  1721240 tagccgttaggctacttgac 1721259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 15774406 - 15774301
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    ||||||||||| ||||||||||| ||||| ||| |||| || ||||||| | |||| |||||| || ||| |||||||||||||||  ||| ||||||||    
T  15774406 tgagcataactcagttggtagga-caatgcattattatatgtaggggtcggggttcgaaccccggacaccccacttattcacctta-taaggtgaattct 15774309  T
Q  122 agtcacta 129  Q
    || |||||    
T  15774308 agccacta 15774301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 50501921 - 50501854
Alignment:
Q  74 gttcaaaccccagagacctcacttattcaccttacaaagt-tgaattctagtcactagactacttgac 140  Q
    ||||||||| || | ||||||||||||||||||| ||||  ||||||||||||| |||||||||||||    
T  50501921 gttcaaacctcaaacacctcacttattcaccttaaaaaggatgaattctagtcaatagactacttgac 50501854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 9527426 - 9527543
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || |||||| ||| |||||| |||||||| |||||||||| | |||  |||||  || ||| |||||||||| |||| || || |||||||    
T  9527426 tgagcatagctcagttggcagggacaatgcattgttatatgcaggggtcggggtttgaaccctggacaccccacttattcatcttataaggt-gaattct 9527524  T
Q  122 agtcactagactacttgac 140  Q
    || ||||||||||| ||||    
T  9527525 agccactagactacctgac 9527543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 19793527 - 19793643
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    ||||||||||| ||||||||||| ||||| ||| |||| |||||||| | || ||| |||||| || ||| |||||||||||||||  ||| ||||||||    
T  19793527 tgagcataactcagttggtagga-caatgcattattatatgcaggggccggaattcgaaccccggacaccccacttattcacctta-taaggtgaattct 19793624  T
Q  122 agtcactagactacttgac 140  Q
    |  |||||| |||| ||||    
T  19793625 aaccactaggctacctgac 19793643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 12148633 - 12148588
Alignment:
Q  57 tatgtgcaggggtcagagttcaaaccccagagacctcacttattca 102  Q
    |||||||||||||| |||||||||||||||| ||| ||||||||||    
T  12148633 tatgtgcaggggtcggagttcaaaccccagacaccccacttattca 12148588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 11405479 - 11405562
Alignment:
Q  45 acaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcacta 129  Q
    |||||| |||||||| |||||||||| | |||| |||||| || ||| |||||||||||||||  ||| |||||||||| |||||    
T  11405479 acaatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcacctta-taaggtgaattctagccacta 11405562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 42831948 - 42832054
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || ||||||||||| || || ||| |||| ||||||||   | ||||||||||| || ||| |||||||||||||||  ||| ||||||||    
T  42831948 tgagcatagctcagttggtagga-cattgcattattatatgcaggggctggggttcaaaccccggacaccccacttattcacctta-taaggtgaattct 42832045  T
Q  122 agtcactag 130  Q
    |||||||||    
T  42832046 agtcactag 42832054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 9768903 - 9768785
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattc 120  Q
    |||||||| || |||||| ||| ||| || |||||||| |||||||||| | |||| |||||| || ||| |||||||||||||| | |||| |||||||    
T  9768903 tgagcatagctcagttggcagggaca-tgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattc 9768805  T
Q  121 tagtcactagactacttgac 140  Q
    |||  ||||| |||| ||||    
T  9768804 tagctactaggctacctgac 9768785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 4605907 - 4605830
Alignment:
Q  52 attgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagtcacta 129  Q
    |||||||| |||||||| || |||||||||| |||| |||||| ||||||||||| | |||| ||||||||| ||||||    
T  4605907 attgttatatgcaggggcca-agttcaaacctcagacacctcatttattcaccttaaaaaaggtgaattctaatcacta 4605830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 8364502 - 8364386
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    ||||||||||| |||||||||||| |||| ||| |||| || | ||||| |||||| ||||||  |  || ||||||||||||||   ||| ||||||||    
T  8364502 tgagcataactcagttggtaggaa-aatgcattattatatgtatgggtcggagttcgaaccccgaacgccccacttattcacctt-ttaaggtgaattct 8364405  T
Q  122 agtcactagactacttgac 140  Q
    ||||||||| |||| ||||    
T  8364404 agtcactaggctacctgac 8364386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 21884576 - 21884692
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || | ||||||||| ||||| ||| |||| |||||||| |   |||| ||||||||| ||| |||||||||||||||  ||| ||||||||    
T  21884576 tgagcatagctcaattggtagga-caatgcattattatatgcaggggccgaggttcgaaccccagacaccccacttattcacctta-taaggtgaattct 21884673  T
Q  122 agtcactagactacttgac 140  Q
    |  ||||||||||| ||||    
T  21884674 aaccactagactacatgac 21884692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 43555968 - 43555852
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || ||||||||||| ||||| ||| |||| ||||||| || | ||||||||||  || ||| |||||||| |||||| || || || ||||    
T  43555968 tgagcatagctcagttggtagga-caatgcattattatatgcagggatcggggttcaaacccaggacaccccacttatttaccttataaggtgga-ttct 43555871  T
Q  122 agtcactagactacttgac 140  Q
    || ||||||||||| ||||    
T  43555870 agccactagactacctgac 43555852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 4616925 - 4616985
Alignment:
Q  74 gttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagactac 135  Q
    |||| |||| |||| ||| ||||||||||||||| |||| |||||||||| |||||||||||    
T  4616925 gttcgaaccacagacaccccacttattcaccttataaag-tgaattctagccactagactac 4616985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 29491470 - 29491551
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcac 103  Q
    |||||||| || |||||| ||| |||||| ||| |||| |||||||||| | |||| |||||| || ||| |||||||||||    
T  29491470 tgagcatagctcagttggcagggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcac 29491551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 140
Target Start/End: Complemental strand, 50199564 - 50199452
Alignment:
Q  28 taacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagtca 126  Q
    ||||| |||||||||| ||| || |||||||| |||||||| | | |||| |||||| || ||| |||||||||||||| | |||| | |||||||| ||    
T  50199564 taactcagttggtagggaca-tgcattgttatatgcaggggccggggttcgaaccccggacaccccacttattcaccttgaaaaaggtcaattctagcca 50199466  T
Q  127 ctagactacttgac 140  Q
    |||| |||| ||||    
T  50199465 ctaggctacctgac 50199452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 11802112 - 11802002
Alignment:
Q  24 agcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctag 123  Q
    ||||||||| ||||||||||| ||||| ||| |||| || ||||||  | |||| |||||| || || ||| |||||||| ||| || ||  ||||||||    
T  11802112 agcataactcagttggtagga-caatgcattattatatgtaggggttggggttcgaaccccggacacttcatttattcacgttataaggta-aattctag 11802015  T
Q  124 tcactagactact 136  Q
    |||||||||||||    
T  11802014 tcactagactact 11802002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 32711187 - 32711128
Alignment:
Q  74 gttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagacta 134  Q
    |||| ||||||||| ||| |||||||||||||||  ||| |||||||||| ||||||||||    
T  32711187 gttcgaaccccagacaccccacttattcacctta-taaggtgaattctagccactagacta 32711128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 43237774 - 43237853
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattca 102  Q
    |||| |||||| || |||||||| ||||| ||| |||| ||||||||||||||||| |||| |||| ||| || |||||||    
T  43237774 tgagtataactcagctggtagga-caatgcattattatatgcaggggtcagagttcgaaccacagacaccccagttattca 43237853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 50755415 - 50755462
Alignment:
Q  93 cacttattcaccttacaaagttgaattctagtcactagactacttgact 141  Q
    ||||||||||||||| |||| |||||||||| |||||| ||||||||||    
T  50755415 cacttattcaccttataaag-tgaattctagccactaggctacttgact 50755462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 26528568 - 26528652
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctta 107  Q
    ||||||||||||||||||||| ||||||| ||| |||| |||||||||| | ||||||||| | || ||| |||||||||||||||    
T  26528568 tgagcataacttagttggtag-aacaatgcattattatatgcaggggtcggggttcaaacctcggacaccccacttattcacctta 26528652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 35190764 - 35190875
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || ||||||||| ||||||| ||| |||| |||||||||| |||||| ||||||  | ||| |||||||||||||||  ||| ||||||||    
T  35190764 tgagcatagctcagttggtag-aacaatgcattattatatgcaggggtcggagttcgaaccccgaacaccccacttattcacctta-taaggtgaattct 35190861  T
Q  122 agtcactagactac 135  Q
    || |||||||||||    
T  35190862 agccactagactac 35190875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 4844144 - 4844262
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattc 120  Q
    |||| |||||| |||||| ||| ||| || |||||||| |||||||||| | ||| ||||| |||| |||||||||||||||||| | |||  |||||||    
T  4844144 tgagtataactcagttggcagggaca-tgcattgttatatgcaggggtcggggtttaaacctcagacacctcacttattcaccttgaaaaaagtgaattc 4844242  T
Q  121 tagtcactagactacttgac 140  Q
    ||  ||||||||||||||||    
T  4844243 taaccactagactacttgac 4844262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 12128003 - 12127886
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || ||||||||||| ||||| ||| |||| |||||||||| || ||| |||||| || ||  |||||||||||||||  ||| ||||||||    
T  12128003 tgagcatagctcagttggtagga-caatgcattattatatgcaggggtcggaattcgaaccccggacacgccacttattcacctta-taaggtgaattct 12127906  T
Q  122 agtcactagactacttgact 141  Q
    || ||||||||||| |||||    
T  12127905 agccactagactacctgact 12127886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 22389844 - 22389728
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || ||||||||||| ||||| ||| |||| |||||||||||| |||| || ||| || ||| |||||||||||||||  ||| ||||||||    
T  22389844 tgagcatagctcagttggtagga-caatgcattattatatgcaggggtcagggttcgaatcccggacaccccacttattcacctta-taaggtgaattct 22389747  T
Q  122 agtcactagactacttgac 140  Q
    || | ||||||||| ||||    
T  22389746 agccgctagactacctgac 22389728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 7563670 - 7563586
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctta 107  Q
    |||||||| || ||||||||||| ||||| ||| |||  |||||||||||| ||||||||||| || ||| |||||||||||||||    
T  7563670 tgagcatagctcagttggtagga-caatgcattattacatgcaggggtcagggttcaaaccccggacaccccacttattcacctta 7563586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 29284118 - 29284199
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcac 103  Q
    ||||||||||| ||||||||||||||||||||| |||| || |||| || | |||| |||||| || ||| |||||||||||    
T  29284118 tgagcataactcagttggtaggaacaatgtattattatatgtagggatcggggttcgaaccccggacaccccacttattcac 29284199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 12089098 - 12089204
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || ||||||||||| ||||| ||| |||| |||||||| | |||||| |||||| || ||| |||||||||||||||  ||| ||||||||    
T  12089098 tgagcatagctcagttggtagga-caatgcattattatatgcaggggccggagttcgaaccccggacaccccacttattcacctta-taaggtgaattct 12089195  T
Q  122 agtcactag 130  Q
    || ||||||    
T  12089196 agccactag 12089204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 6530299 - 6530182
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgta-ttgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattc 120  Q
    ||||||||| | ||||||||| ||||||| | || |||| |||||||| | | ||||||||| | || ||| ||||||||||||||| || || ||||||    
T  6530299 tgagcataaatcagttggtag-aacaatgcaattattatatgcaggggccggggttcaaacctcggacaccccacttattcaccttataaggt-gaattc 6530202  T
Q  121 tagtcactagactacttgac 140  Q
    ||| ||||||||||||||||    
T  6530201 tagccactagactacttgac 6530182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 138
Target Start/End: Complemental strand, 30668245 - 30668162
Alignment:
Q  56 ttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagt-tgaattctagtcactagactacttg 138  Q
    |||| ||||||||||||||||| |||| |  | ||| ||||||||||||||| ||| | |||||| ||||||||||||||||||    
T  30668245 ttatatgcaggggtcagagttcgaaccacgaacaccccacttattcaccttaaaaaatgtgaattatagtcactagactacttg 30668162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 16251617 - 16251506
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||||||||||||||||| |||||| |   |||| ||||||||||   |||| ||| || || ||| |||||||||||||||  ||| ||||||||    
T  16251617 tgagcataacttagttggtagg-acaatgcacaattatatgcaggggtcgttgttcgaactccggacaccccacttattcacctta-taaggtgaattct 16251520  T
Q  122 agtcactagactac 135  Q
    ||||||||| ||||    
T  16251519 agtcactaggctac 16251506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 21507295 - 21507215
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcac 103  Q
    |||||||| |||||||||||||| ||||||||| |||| |||||||||| |||||  ||| || || ||| |||||||||||    
T  21507295 tgagcatagcttagttggtagga-caatgtattattatatgcaggggtcggagtttgaactccggacaccccacttattcac 21507215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 5544302 - 5544361
Alignment:
Q  48 atgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctta 107  Q
    |||||||||||| |||||||||| | |||| ||||||||| ||| ||||||||| |||||    
T  5544302 atgtattgttatatgcaggggtcggggttcgaaccccagataccccacttattctcctta 5544361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 26669702 - 26669635
Alignment:
Q  74 gttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagtcactagactacttgac 140  Q
    |||| ||||||||| ||| |||||||||||||| | |||| |||||||||| ||||| ||||||||||    
T  26669702 gttcgaaccccagacaccccacttattcaccttgaaaaaggtgaattctagccactaaactacttgac 26669635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 10373596 - 10373657
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaacccc 84  Q
    |||||||||||||||||||| |||||||| ||| |||| |||||||||| | |||| ||||||    
T  10373596 tgagcataacttagttggta-gaacaatgcattattatatgcaggggtcggggttcgaacccc 10373657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 30566059 - 30566175
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    ||||||||||| |||||||||| |||||| ||| |||| ||||| |||   ||||  |||||| || ||| |||||||||||||||  ||| |||||||     
T  30566059 tgagcataactcagttggtagg-acaatgcattattatatgcagaggttgaagtttgaaccccggacaccccacttattcacctta-taaggtgaattcc 30566156  T
Q  122 agtcactagactacttgac 140  Q
    || ||||||||||| ||||    
T  30566157 agccactagactacctgac 30566175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 5288439 - 5288355
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctta 107  Q
    ||||||||||| ||||||||||| ||||| ||| |||| |||||||||| | || | ||| || || |||||| ||||||||||||    
T  5288439 tgagcataactcagttggtagga-caatgcattattatatgcaggggtcggggtccgaactccggacacctcaattattcacctta 5288355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 9491829 - 9491745
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctta 107  Q
    ||||||||||| ||||||||||| ||||| ||| |||| || ||||| | | |||| |||||| || ||| |||||||||||||||    
T  9491829 tgagcataactcagttggtagga-caatgcattattatatgtaggggccggggttcgaaccccggacaccccacttattcacctta 9491745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 25020624 - 25020506
Alignment:
Q  20 cttgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaatt 119  Q
    |||||||||| || || |||||||| | ||| ||| |||| |||||||| | | |||| |||||| || ||| |||||||||||||||  ||| ||||||    
T  25020624 cttgagcatagctcagctggtagga-cgatgcattattatatgcaggggcctgggttcgaaccccggacaccccacttattcacctta-taaggtgaatt 25020527  T
Q  120 ctagtcactagactacttgac 140  Q
    |||| |||||| |||| ||||    
T  25020526 ctagccactaggctacctgac 25020506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 2029222 - 2029116
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    ||||||||||||||||||||||| ||||||||| |||| |||||||||| |  ||| ||||||  | ||| |||||||||||||||  ||| ||||||||    
T  2029222 tgagcataacttagttggtagga-caatgtattattatatgcaggggtcgggattcgaaccccgaacaccccacttattcacctta-taaggtgaattct 2029125  T
Q  122 agtcactag 130  Q
    || ||||||    
T  2029124 agccactag 2029116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 23925544 - 23925660
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    ||||||||||| ||||| ||||| ||||| ||| |||| |||||||||| | |||| || ||| || ||| |||||||||| |||| || || |||||||    
T  23925544 tgagcataactcagttgatagga-caatgcattattatatgcaggggtctgggttcgaatcccggataccccacttattcatcttataaggt-gaattct 23925641  T
Q  122 agtcactagactacttgac 140  Q
    || ||||||||||||||||    
T  23925642 agccactagactacttgac 23925660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 33800894 - 33800978
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctta 107  Q
    ||||||||||| ||||||||||| ||||| ||| |||| |||||||| | | |||| ||||||||| ||| |||||||||||||||    
T  33800894 tgagcataactcagttggtagga-caatgcattattatatgcaggggccggggttcgaaccccagacaccccacttattcacctta 33800978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 1244809 - 1244715
Alignment:
Q  34 agttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactag 130  Q
    ||||||||||| ||| | ||| |||| |||||||||||| |||| ||||||||| ||| |||||||||||||||  ||| |||||||||| ||||||    
T  1244809 agttggtagga-caaagcattattatatgcaggggtcagggttcgaaccccagacaccccacttattcacctta-taaggtgaattctagccactag 1244715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 11246588 - 11246473
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattc 120  Q
    |||||||| || |||||| ||| ||| || |||||||| |||||||||| | | |||||||||||| | | |||||||||| ||| | |||| |||||||    
T  11246588 tgagcatagctcagttggcagggaca-tgcattgttatatgcaggggtcggggctcaaaccccagacatcccacttattcagcttgaaaaaggtgaattc 11246490  T
Q  121 tagtcactagactactt 137  Q
    ||| |||||||||||||    
T  11246489 tagccactagactactt 11246473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 34010548 - 34010654
Alignment:
Q  34 agttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttaca-aagttgaattctagtcactagac 132  Q
    ||||||||||| ||||| ||| |||| |  ||||||| |||||| |||||| || | |||| |||||||||||| | ||| |||||||||||||||||||    
T  34010548 agttggtagga-caatgcattattatatataggggtcggagttcgaaccccggacatctcatttattcaccttatataaggtgaattctagtcactagac 34010646  T
Q  133 tacttgac 140  Q
    ||| ||||    
T  34010647 tacctgac 34010654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 5156897 - 5157014
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || |||||  | |||||||| |||||||| |||| ||||||  |||| ||||| ||| |||  ||||||||||||||  ||| ||||||||    
T  5156897 tgagcatagctcagttgacatgaacaatgcattgttatatgcaagggtcaaggttcgaaccctagacaccctacttattcacctta-taaggtgaattct 5156995  T
Q  122 agtcactagactacttgac 140  Q
    || ||||||||||| ||||    
T  5156996 agccactagactacctgac 5157014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 29096402 - 29096286
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || ||||||||||| ||||| ||| |||| |||| ||| | |||||| |||||| || ||| |||||||||||||||  ||| ||||||||    
T  29096402 tgagcatagctcagttggtagga-caatgcattattatatgcaagggccggagttcgaaccccggacaccccacttattcacctta-taaggtgaattct 29096305  T
Q  122 agtcactagactacttgac 140  Q
    || |||||| |||| ||||    
T  29096304 agccactaggctacctgac 29096286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 18872522 - 18872636
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || ||||||||||| ||||| ||| |||| |||||||||| | |||| ||||||  | ||| ||||||||||||||   ||| ||||||||    
T  18872522 tgagcatagctcagttggtagga-caatgcattattatatgcaggggtcggggttcgaaccccgaacaccccacttattcacctt---aaggtgaattct 18872617  T
Q  122 agtcactagactacttgac 140  Q
    || |||||| |||| ||||    
T  18872618 agccactaggctacctgac 18872636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 18102018 - 18101959
Alignment:
Q  48 atgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctta 107  Q
    ||||||| |||| |||||||| | |||||| ||||||||| ||| |||||||||||||||    
T  18102018 atgtattattatatgcaggggccggagttcgaaccccagacaccccacttattcacctta 18101959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 31556848 - 31556927
Alignment:
Q  52 attgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagtcactag 130  Q
    |||||||| |||||||||| |||||| |||||| || ||| |||||||||||||| | || | |||||||||| ||||||    
T  31556848 attgttatatgcaggggtcggagttcgaaccccggacaccccacttattcaccttgaaaagggtgaattctagccactag 31556927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 34921183 - 34921101
Alignment:
Q  48 atgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactaga 131  Q
    ||||||| |||| |||||||||| | |||| ||||| ||| | | |||||||||||||||  |||||||||||||| |||||||    
T  34921183 atgtattattatatgcaggggtcggggttctaacccaagacatcccacttattcacctta-taagttgaattctagccactaga 34921101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 843462 - 843346
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || |||||||| || ||||| ||| |||| || ||||| | | |||| |||||| || ||| ||||||||||||||| ||| |||||||||    
T  843462 tgagcatatctcagttggtatga-caatgcattattatatgtaggggacggggttcgaaccccggacaccccacttattcaccttataaa-ttgaattct 843365  T
Q  122 agtcactagactacttgac 140  Q
    || |||||| |||| ||||    
T  843364 agccactaggctacctgac 843346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 29106132 - 29106016
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || | ||||||||| ||||| ||| |||| |||||||| |  ||||| ||||| ||| ||| ||||||||||||||| || ||| ||||||    
T  29106132 tgagcatagctcaattggtagga-caatgcattattatatgcaggggccgaagttcgaaccctagacaccccacttattcaccttataaggtt-aattct 29106035  T
Q  122 agtcactagactacttgac 140  Q
    || ||| ||||||| ||||    
T  29106034 agccaccagactacctgac 29106016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 27219657 - 27219546
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| ||||||||||||| |||||| ||| |||| |||| ||| | | |||||||||||  | ||| |||||||||||| ||  ||| ||||||||    
T  27219657 tgagcatagcttagttggtagg-acaatgcattattatatgcatgggccggggttcaaaccccgtacaccccacttattcacc-taataaggtgaattct 27219560  T
Q  122 agtcactagactac 135  Q
    || |||||| ||||    
T  27219559 agccactaggctac 27219546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 37303934 - 37304015
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcac 103  Q
    |||||||| || |||||| ||| |||||||||| |||| |||||||||| | |||| |||||  || ||| |||||||||||    
T  37303934 tgagcatagctcagttggcagggacaatgtattattatatgcaggggtcggggttcgaaccctggacaccccacttattcac 37304015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 41539348 - 41539433
Alignment:
Q  56 ttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagtcactagactacttgac 140  Q
    |||| |||||||||   ||||| ||||||||| ||| |||||||| | ||| | |||| ||||||||||||||||||||| |||||    
T  41539348 ttatatgcaggggttgtagttcgaaccccagacaccccacttattaatcttgaaaaaggtgaattctagtcactagactatttgac 41539433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 42455476 - 42455377
Alignment:
Q  34 agttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagact 133  Q
    ||||||||||| ||||| ||| |||| |||||||| | |||||| |||||| || ||  |||||||||||||||  ||| |||||||||| |||||| ||    
T  42455476 agttggtagga-caatgcattattatatgcaggggccggagttcgaaccccggacactccacttattcacctta-taaggtgaattctagccactaggct 42455379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 130
Target Start/End: Original strand, 43774197 - 43774292
Alignment:
Q  34 agttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactag 130  Q
    |||||| ||| |||||| |||||||| |||||||||| | |||| ||||||||| ||| |||||||||||||||  ||| |||||||||| ||||||    
T  43774197 agttggcagggacaatgcattgttatatgcaggggtcggggttcgaaccccagacaccccacttattcacctta-taaggtgaattctagccactag 43774292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 36331821 - 36331704
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || | |||| ||| |||||| ||| |||| |||||||||| | |||| |||||| || ||| ||||||||||| ||| |||| ||||||||    
T  36331821 tgagcatagctcaattggcagggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttaaaaag-tgaattct 36331723  T
Q  122 agtcactagactacttgac 140  Q
    || ||||||||||| ||||    
T  36331722 agccactagactacctgac 36331704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 24130560 - 24130678
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattc 120  Q
    ||||||||||| |||||| ||| ||| |  |||||||| |||||||| | | |||  |||||| || ||| |||||||||||||| | |||||||||| |    
T  24130560 tgagcataactcagttggcagggaca-tacattgttatatgcaggggacggggtttgaaccccggacaccccacttattcaccttgaaaaagttgaatac 24130658  T
Q  121 tagtcactagactacttgac 140  Q
    ||| ||||||||||||||||    
T  24130659 tagccactagactacttgac 24130678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 43566878 - 43566774
Alignment:
Q  34 agttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagact 133  Q
    ||||||||||| ||||| ||| |||| |||||||||| | |||| |||| |||| ||| |||||||||||||||  ||| |||||||||| |||||| ||    
T  43566878 agttggtagga-caatgcattattatatgcaggggtcggggttcgaacctcagacaccccacttattcacctta-taaggtgaattctagccactaggct 43566781  T
Q  134 acttgac 140  Q
    || ||||    
T  43566780 acctgac 43566774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 49146076 - 49146196
Alignment:
Q  13 aatatcacttgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaag 112  Q
    |||||| | ||||| ||||| ||||||||||| ||||| ||| |||| |||||||||| | |||| |||||| || ||| ||||||||||| |||  |||    
T  49146076 aatatcccgtgagcttaactcagttggtagga-caatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcacttta-taag 49146173  T
Q  113 ttgaattctagtcactagactac 135  Q
     |||||||||| ||||| |||||    
T  49146174 gtgaattctagccactaaactac 49146196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 45713481 - 45713565
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctta 107  Q
    |||||||||||||||||||||| |||||| ||| |||| || ||||| | |||||| ||| || || ||| |||||||||||||||    
T  45713481 tgagcataacttagttggtagg-acaatgcattattatatgtaggggccggagttcgaactccggacaccccacttattcacctta 45713565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 140
Target Start/End: Complemental strand, 24160591 - 24160504
Alignment:
Q  54 tgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagtcactagactacttgac 140  Q
    |||||| |||||||||| | |||| |||||| || ||  ||||||||||| || | ||||||||||||||| ||| ||||||||||||    
T  24160591 tgttatatgcaggggtcggggttcgaaccccggacactccacttattcactttcaaaaagttgaattctagccaccagactacttgac 24160504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 56 - 135
Target Start/End: Original strand, 27066644 - 27066722
Alignment:
Q  56 ttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagactac 135  Q
    |||| |||||||||||| |||| |||||| || ||| |||||||||||||||   || ||||||||||||||||| ||||    
T  27066644 ttatatgcaggggtcagggttcgaaccccggacaccccacttattcacctta-tgaggtgaattctagtcactaggctac 27066722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 31576511 - 31576558
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggt 69  Q
    |||||||| || ||||||||||||||||| |||||||| |||||||||    
T  31576511 tgagcatagctcagttggtaggaacaatgcattgttatatgcaggggt 31576558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 44592013 - 44592117
Alignment:
Q  34 agttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagtcactagac 132  Q
    |||||||||||||| || |||||||| |||||||||||||||||||| |||  | | || ||||||||||||| | |||| |||||| ||| |||||| |    
T  44592013 agttggtaggaaca-tgcattgttatatgcaggggtcagagttcaaaacccgaacatct-acttattcaccttgaaaaaggtgaattatagccactag-c 44592109  T
Q  133 tacttgac 140  Q
    ||||||||    
T  44592110 tacttgac 44592117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 9624983 - 9625100
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || |||||| ||| |||||| ||| |||| |||||||| | | |||| |||||| || ||| ||||||||||| ||| |||||  | ||||    
T  9624983 tgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcacttta-aaagtgaatttct 9625081  T
Q  122 agtcactagactacttgac 140  Q
    || ||||||||||| ||||    
T  9625082 agccactagactacctgac 9625100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 13874906 - 13874817
Alignment:
Q  45 acaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagactac 135  Q
    |||||| ||| |||| |||||||||| | ||||||| |||||| | | || ||||||||||||  ||| |||||||||| |||||||||||    
T  13874906 acaatgcattattatatgcaggggtcggggttcaaatcccagacatcccatttattcacctta-taaggtgaattctagccactagactac 13874817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 33206758 - 33206874
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || ||||||||||| ||||| ||| |||| ||||||||   | |||| |||||| || ||| |||||||||||||||  ||| ||||||||    
T  33206758 tgagcatagctcagttggtagga-caatgcattattatatgcaggggctggggttcgaaccccggacaccccacttattcacctta-taaggtgaattct 33206855  T
Q  122 agtcactagactacttgac 140  Q
    || |||||| |||| ||||    
T  33206856 agccactaggctacctgac 33206874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 41121872 - 41121957
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcac-ttattcacctta 107  Q
    ||||||||||| |||||||||| |||||| ||| |||| ||||| |||| | ||||||||||| || ||| ||| ||||||||||||    
T  41121872 tgagcataactcagttggtagg-acaatgcattattatatgcagaggtcggggttcaaaccccggacaccccactttattcacctta 41121957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 42665990 - 42665904
Alignment:
Q  52 attgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagtcactagactactt 137  Q
    |||||||  |||||||||| |||||| ||| || || ||| |||||||||||||| | |||  ||||||||| ||||||||||||||    
T  42665990 attgttaaatgcaggggtcggagttcgaactccggacaccccacttattcaccttgaaaaaaatgaattctaatcactagactactt 42665904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 47191373 - 47191490
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || |||||| ||| |||||| ||| |||| ||||||||   |||||| ||||||  | ||| |||||||||||||||  ||| ||||||||    
T  47191373 tgagcatagctcagttggcagggacaatgcattattatatgcaggggctggagttcgaaccccgaacaccccacttattcacctta-taagatgaattct 47191471  T
Q  122 agtcactagactacttgac 140  Q
    || |||||| |||| ||||    
T  47191472 agccactaggctacctgac 47191490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 362966 - 363050
Alignment:
Q  45 acaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactag 130  Q
    |||||| ||| |||| |||||||||| |||||| |||||| || ||| ||||||||||| |||  ||| ||||||||| |||||||    
T  362966 acaatgcattattatatgcaggggtcggagttcgaaccccggataccccacttattcacttta-taaggtgaattctaatcactag 363050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 140
Target Start/End: Complemental strand, 6054294 - 6054201
Alignment:
Q  48 atgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagtcactagactacttgac 140  Q
    |||||||||||  ||||| |||| |||||| ||| ||  | |||||||||||||||||| | |||| |||||||||  |||||||||| |||||    
T  6054294 atgtattgttagatgcagaggtcggagttcgaactccgaacacctcacttattcaccttgaaaaaggtgaattctaaccactagactatttgac 6054201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 16006600 - 16006516
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctta 107  Q
    ||||||||||| ||||||||| ||||||| ||| | || |||| | ||| | |||| ||||||||| ||| |||||||||||||||    
T  16006600 tgagcataactcagttggtag-aacaatgcattataatatgcaagagtcggggttcgaaccccagacaccccacttattcacctta 16006516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 35483270 - 35483381
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || |||| |||||| ||||| ||| |||| |||||||||| | |||| || ||| || ||| |||||||||||||||  ||| | ||||||    
T  35483270 tgagcatagctcagttagtagga-caatgcattattatatgcaggggtcggggttcgaatcccggacaccccacttattcacctta-taaggtaaattct 35483367  T
Q  122 agtcactagactac 135  Q
    || |||||||||||    
T  35483368 agccactagactac 35483381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 52030121 - 52030202
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcac 103  Q
    ||||||||||| |||||| ||| |||||||||| |||| |||||||| | | |||| |||||| || |||  ||||||||||    
T  52030121 tgagcataactcagttggcagggacaatgtattattatatgcaggggccggggttcgaaccccggacaccctacttattcac 52030202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 13537406 - 13537289
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    ||||||||||| |||||  | |||||||| |||||||| |||||| ||| | |||| ||||||||| ||| |||||||||| ||||  ||| |||||| |    
T  13537406 tgagcataactcagttgacatgaacaatgcattgttatatgcaggtgtcggggttcgaaccccagacaccccacttattcatctta-taaggtgaattgt 13537308  T
Q  122 agtcactagactacttgac 140  Q
    || ||||| ||||||||||    
T  13537307 agccactaaactacttgac 13537289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 13626954 - 13626837
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    ||||||||||| |||||  | |||||||| |||||||| |||||| ||| | |||| ||||||||| ||| |||||||||| ||||  ||| |||||| |    
T  13626954 tgagcataactcagttgacatgaacaatgcattgttatatgcaggtgtcggggttcgaaccccagacaccccacttattcatctta-taaggtgaattgt 13626856  T
Q  122 agtcactagactacttgac 140  Q
    || ||||| ||||||||||    
T  13626855 agccactaaactacttgac 13626837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 7540582 - 7540465
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    ||||||||||| | ||||||||| ||||| ||| |||| |||||||||| | |||| |||||  || | | ||||||||||||||| || | |||||| |    
T  7540582 tgagcataactcacttggtagga-caatgcattattatatgcaggggtcggggttctaaccctggacaacccacttattcaccttataagggtgaattat 7540484  T
Q  122 agtcactagactacttgac 140  Q
    || ||||||||||| ||||    
T  7540483 agccactagactacctgac 7540465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 37154514 - 37154631
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| ||||||||| ||  |||||| || ||||| |||||||||| || ||| |||||  || ||| || ||||||||||||  ||| ||||||||    
T  37154514 tgagcatagcttagttggcagagacaatgcatcgttatatgcaggggtcggaattcgaaccctggacaccccatttattcacctta-taaggtgaattct 37154612  T
Q  122 agtcactagactacttgac 140  Q
    || ||||||||||| ||||    
T  37154613 aggcactagactacctgac 37154631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 22847327 - 22847238
Alignment:
Q  52 attgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagtcactagactacttgac 140  Q
    |||||||| ||||||||||   |||| ||||||| | |||||||||||||||||| | |||| |||||||||| |||| |||||| ||||    
T  22847327 attgttatatgcaggggtcgaggttcgaaccccacacacctcacttattcaccttaaaaaaggtgaattctagccacttgactacatgac 22847238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 13762594 - 13762519
Alignment:
Q  34 agttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaa 110  Q
    ||||||||||| ||||| ||| |||| |||||||||||| |||| |||| | || ||| ||||||||||||||||||    
T  13762594 agttggtagga-caatgcattattatatgcaggggtcagtgttcgaaccacggacaccccacttattcaccttacaa 13762519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 18577114 - 18577197
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt 106  Q
    ||||||||||| |||||  ||| ||| ||||||||||| |||||||||| | |||||||||||| | |  |||||||||||||||    
T  18577114 tgagcataactcagttgacagggaca-tgtattgttatatgcaggggtcggggttcaaaccccaaacatttcacttattcacctt 18577197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 140
Target Start/End: Complemental strand, 39208897 - 39208845
Alignment:
Q  89 acctcacttattcacctt-acaaagttgaattctagtcactagactacttgac 140  Q
    |||||||||||||||||| | |||| |||||||||| ||||||||||||||||    
T  39208897 acctcacttattcacctttaaaaaggtgaattctagccactagactacttgac 39208845  T

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Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 43468799 - 43468693
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || ||||||||||| ||||| |||||||| || ||||||| | |||| ||| || || ||| |||||||||||||||  ||| ||||||||    
T  43468799 tgagcatagctcagttggtagga-caatgcattgttatatgtaggggtcggggttcgaactccggacaccccacttattcacctta-taaggtgaattct 43468702  T
Q  122 agtcactag 130  Q
    || ||||||    
T  43468701 agccactag 43468693  T

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Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 140
Target Start/End: Complemental strand, 220425 - 220338
Alignment:
Q  54 tgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagtcactagactacttgac 140  Q
    |||||| ||||| |||||| |||| || ||| || ||| |||||||||||||| | |||| |||||||||  ||||||||||||||||    
T  220425 tgttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaattctaaccactagactacttgac 220338  T

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Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 140
Target Start/End: Complemental strand, 689580 - 689493
Alignment:
Q  54 tgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagtcactagactacttgac 140  Q
    |||||| ||||| |||||| |||| || ||| || ||| |||||||||||||| | |||| |||||||||  ||||||||||||||||    
T  689580 tgttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaattctaaccactagactacttgac 689493  T

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Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 140
Target Start/End: Complemental strand, 734048 - 733961
Alignment:
Q  54 tgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagtcactagactacttgac 140  Q
    |||||| ||||| |||||| |||| || ||| || ||| |||||||||||||| | |||| |||||||||  ||||||||||||||||    
T  734048 tgttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaattctaaccactagactacttgac 733961  T

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Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 140
Target Start/End: Complemental strand, 857944 - 857857
Alignment:
Q  54 tgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagtcactagactacttgac 140  Q
    |||||| ||||| |||||| |||| || ||| || ||| |||||||||||||| | |||| |||||||||  ||||||||||||||||    
T  857944 tgttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaattctaaccactagactacttgac 857857  T

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Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 13702423 - 13702341
Alignment:
Q  46 caatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcacta 129  Q
    ||||| ||| |||| |||||||||| | |||| |||| |||| |||||||||||||||||||  ||| |||||||||| |||||    
T  13702423 caatgcattattatatgcaggggtcggggttcgaacctcagacacctcacttattcacctta-taaggtgaattctagccacta 13702341  T

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Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 21133614 - 21133543
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctc 93  Q
    ||||||||||| |||||| |||||||||| ||| |||| |||||| ||| | |||| ||||||||| |||||    
T  21133614 tgagcataactcagttggcaggaacaatgcattattatatgcaggagtcggggttcgaaccccagacacctc 21133543  T

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Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 29937211 - 29937289
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattc 101  Q
    |||||||| || |||||||||| ||| ||||||||||| |||||||| | |||||| |||| |||| ||| |||||||||    
T  29937211 tgagcatagctcagttggtagggaca-tgtattgttatatgcaggggccggagttcgaacctcagacaccccacttattc 29937289  T

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Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 140
Target Start/End: Complemental strand, 33570501 - 33570407
Alignment:
Q  45 acaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagactacttgac 140  Q
    |||||| |||||||| |||| ||||| | |||| |||| | || ||| |||||||||||||||  ||| |||||||||| ||||| ||||||||||    
T  33570501 acaatgcattgttatatgcatgggtcggggttcgaacctcggacaccccacttattcacctta-taaggtgaattctagccactaaactacttgac 33570407  T

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Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 15042459 - 15042343
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    |||||||| || ||||||||||| ||||| ||| |||| |||||||| | | |||| |||||| || ||| |||||||||||||||  ||| ||||||||    
T  15042459 tgagcatagctcagttggtagga-caatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcacctta-taaggtgaattct 15042362  T
Q  122 agtcactagactacttgac 140  Q
    |  |||||  |||||||||    
T  15042361 aaccactacgctacttgac 15042343  T

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Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 134
Target Start/End: Original strand, 33982220 - 33982301
Alignment:
Q  52 attgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagacta 134  Q
    |||||||| |||||||||| | |||| ||||||||| ||| ||||||||||| |||  ||| |||||||||| || |||||||    
T  33982220 attgttatatgcaggggtcggggttcgaaccccagacaccgcacttattcacttta-taaggtgaattctagccaatagacta 33982301  T

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Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 2696533 - 2696614
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcac 103  Q
    ||||||||||| |||||| ||| |||||| ||| |||| |||||||| | | |||| |||||| || ||| |||||||||||    
T  2696533 tgagcataactcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 2696614  T

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Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 9524958 - 9525042
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctta 107  Q
    |||||||| || ||||||||||| ||||| ||| |||| |||||||| | | |||| ||||||||| |||  ||||||||||||||    
T  9524958 tgagcatagctcagttggtagga-caatgcattattatatgcaggggccggggttcgaaccccagacaccctacttattcacctta 9525042  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 24608577 - 24608493
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctta 107  Q
    |||||||| || ||||||||||| ||||| ||| |||| |||||||| | | |||| ||||||||| |||  ||||||||||||||    
T  24608577 tgagcatagctcagttggtagga-caatgcattattatatgcaggggccggggttcgaaccccagacaccctacttattcacctta 24608493  T

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Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 26703984 - 26703900
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctta 107  Q
    ||||||||||| ||||||||||| ||||| ||| |||| |||| ||||| | |||| || |||  | |||||||||||||||||||    
T  26703984 tgagcataactcagttggtagga-caatgcattattatatgcaagggtcggggttcgaatcccgaacacctcacttattcacctta 26703900  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 140
Target Start/End: Complemental strand, 36359784 - 36359696
Alignment:
Q  51 tattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagactacttgac 140  Q
    |||| |||| |||||||| | |||||| || ||| || ||| |||||||||||||||  ||| |||||||||| ||||||||||| ||||    
T  36359784 tattattatatgcaggggccggagttcgaatcccggacaccccacttattcacctta-taaggtgaattctagccactagactacctgac 36359696  T

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Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 37219506 - 37219590
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctta 107  Q
    ||||||||||| |||||||||| ||||| |||| |||| |||||| ||  | ||||||||||| || ||| || ||||||||||||    
T  37219506 tgagcataactcagttggtagg-acaatatattattatatgcaggtgttggggttcaaaccccggacaccccatttattcacctta 37219590  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 12560033 - 12560150
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcacctt-acaaagttgaattc 120  Q
    |||||||| || |||||| ||||||||   |||||||| |||||||||  | |||| |||| || | |||||||||||| ||||| | |||| | |||||    
T  12560033 tgagcatagctcagttggcaggaacaac--attgttatatgcaggggttggggttcgaacctcaaacacctcacttatttaccttgaaaaaggtcaattc 12560130  T
Q  121 tagtcactagactacttgac 140  Q
    ||| || |||||||||||||    
T  12560131 tagccattagactacttgac 12560150  T

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Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 140
Target Start/End: Original strand, 14683899 - 14683993
Alignment:
Q  44 aacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattctagtcactagactacttgac 140  Q
    ||||||| ||| |||| ||||||| || | |||| |||||| || | | ||||||||||||||| || || ||||||||||||||||||||| ||||    
T  14683899 aacaatgcattattatatgcaggg-tcggggttcgaaccccggacatcccacttattcaccttataaggt-gaattctagtcactagactacctgac 14683993  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 129
Target Start/End: Complemental strand, 24572894 - 24572838
Alignment:
Q  74 gttcaaaccccagagacctcacttattcaccttacaaa-gttgaattctagtcacta 129  Q
    |||||||||||| | |||||| |||||||||||| ||| |||||||||||| |||||    
T  24572894 gttcaaaccccatacacctcatttattcaccttaaaaatgttgaattctagccacta 24572838  T

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Target: scaffold0119 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 1091 - 1158
Alignment:
Q  74 gttcaaaccccagagacctcacttattcacctt-acaaagttgaattctagtcactagactacttgac 140  Q
    |||| ||||||||| ||| |||||||||||||| | |||| |||||||||| ||||| ||||||||||    
T  1091 gttcgaaccccagacaccccacttattcaccttgaaaaaggtgaattctagccactaaactacttgac 1158  T

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Target: scaffold1086 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 2489 - 2605
Alignment:
Q  22 tgagcataacttagttggtaggaacaatgtattgttatgtgcaggggtcagagttcaaaccccagagacctcacttattcaccttacaaagttgaattct 121  Q
    ||||||||||| |||||||||| |||||| ||| |||| ||||| |||   ||||  |||||| || ||| |||||||||||||||  ||| |||||||     
T  2489 tgagcataactcagttggtagg-acaatgcattattatatgcagaggttgaagtttgaaccccggacaccccacttattcacctta-taaggtgaattcc 2586  T
Q  122 agtcactagactacttgac 140  Q
    || ||||||||||| ||||    
T  2587 agccactagactacctgac 2605  T

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