View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7494_low_58 (Length: 246)
Name: NF7494_low_58
Description: NF7494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7494_low_58 |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 26568763 - 26568994
Alignment:
| Q |
8 |
ccaagaatatacatacatataattaaactacttatagataatttgagaacaatttgatattgttacactcaatagaaaagcatccatctgagtagaaagc |
107 |
Q |
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| T |
26568763 |
ccaaaaatatacctacgtataattaaactatttatagataatttgagaacaatttgatattgttacactcaatagaaaagcatccatctgagtagaaagc |
26568862 |
T |
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| Q |
108 |
attgtcaaactaattctttagcagcataatatttttcactcacaaaggatttgaaactacaaccattaagatactagtacatcatgtttcaccaataaaa |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
26568863 |
attgtcaaactaattctttagcagcataatatttttcactcacaaaggatttgaaactacaaccattaagatactagtacatcatgtttcaccaatagaa |
26568962 |
T |
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| Q |
208 |
gtaaacaaagaatttgaaactataaccattaa |
239 |
Q |
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||||||||||||||| |||||||||||||||| |
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| T |
26568963 |
gtaaacaaagaatttaaaactataaccattaa |
26568994 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 26567538 - 26567768
Alignment:
| Q |
13 |
aatatacatacatataattaaactacttatagataatttgagaacaatttgatattgttacactcaatagaaaagcatccatctgagtagaaagcattgt |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
26567538 |
aatatacatacatataattaaactacttatagataatttgagaacaatatgatattgttacactcaatagaaaagcatccatctcagtagaaagcattgt |
26567637 |
T |
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| Q |
113 |
caaactaattctttagcagcataatatttttcactcacaaaggatttgaaactacaaccattaagatactagtacatcatgtttcaccaataaaagtaaa |
212 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| | |
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| T |
26567638 |
tgcactaattctttagcagcataatatttttcactcacagaggatttgaaactacaaccattaagatactagtacaccatgtttcaccaatagaagtaga |
26567737 |
T |
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| Q |
213 |
caaagaatttgaaactataaccattaagtag |
243 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
26567738 |
caaagaatttgaaactataaccattaagtag |
26567768 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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