View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7495_high_7 (Length: 343)
Name: NF7495_high_7
Description: NF7495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7495_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 40745215 - 40744886
Alignment:
| Q |
1 |
ccttgcatataacaaatacataagaaattccctatcaagttaaactatgtgattcttttgaacctatagtgcttcacttggtagttggtagcaaggtttg |
100 |
Q |
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| T |
40745215 |
ccttgaatataacaaatacataagaaattccgtacaaagttaaactatgtgattcttttgaaactatagtgcttcacttggtagttggtagcaaggtttg |
40745116 |
T |
|
| Q |
101 |
aaaaagtgattgcggcaatggtcctgttacaatttttcattttgcaaggaatcacagtcaaatgtgattgatgcaacattaatccaaattaaagttacag |
200 |
Q |
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| T |
40745115 |
aaaaagtgattgcggcaatggtcctgttacaatttttcattttgcaaggaatcacagtcaaatgtgattgatgcaacattaatccaaattaaagttacag |
40745016 |
T |
|
| Q |
201 |
ttaaagagatagcaaaaaccgattttgttgaccaaatcgcagtcccagaccttcatttaaagtcatggcc--ggtgtttcctatatttgtctactataac |
298 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |
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| T |
40745015 |
ttaaagagatagcaaaaaccgattttgttgaccaaatcgcggtcccagaccttcatttaaagtcatggccggggtgtttcctatatttgtctactaaaac |
40744916 |
T |
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| Q |
299 |
attagtttcagatattaacaacatacacat |
328 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
40744915 |
attagtttcagatattaacaacatacacat |
40744886 |
T |
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