View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7495_high_9 (Length: 308)
Name: NF7495_high_9
Description: NF7495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7495_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 129; Significance: 9e-67; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 24 - 230
Target Start/End: Original strand, 43867824 - 43868032
Alignment:
| Q |
24 |
agaacatggccaacaagcacaataatgagataacaatgaatgtgttaaattctacaaa-tgtgaattaatgagtaaacagcagcatcaagattcatcagc |
122 |
Q |
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| T |
43867824 |
agaacatggccaacaagcacaataatgagataataatgaatgtgttaaactgtacaaaatgtgattgaatgagtaaagagcagcatcgtgattcatcagc |
43867923 |
T |
|
| Q |
123 |
aacattgtgaaaaaagataacaaaagaatgaaaa-caataaatcgcactatacctttcaaatcttctgccaaacctagatttggagtgttttggtgactg |
221 |
Q |
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|||||||||| | ||||| ||||||||| ||||| |||||||||||||| |||||||| |||||||||| ||||||||||||||||| |||||||||||| |
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| T |
43867924 |
aacattgtgagacaagatgacaaaagaaggaaaaacaataaatcgcactgtacctttcgaatcttctgcaaaacctagatttggagtcttttggtgactg |
43868023 |
T |
|
| Q |
222 |
atggaatca |
230 |
Q |
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| T |
43868024 |
atggaatca |
43868032 |
T |
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