View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7495_low_1 (Length: 667)

Name: NF7495_low_1
Description: NF7495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7495_low_1
NF7495_low_1
[»] chr5 (12 HSPs)
chr5 (164-344)||(27845706-27845886)
chr5 (16-150)||(27845572-27845721)
chr5 (335-511)||(27845900-27846071)
chr5 (594-647)||(6515343-6515396)
chr5 (594-647)||(14206502-14206557)
chr5 (594-647)||(40223689-40223743)
chr5 (594-647)||(3141609-3141663)
chr5 (476-514)||(8787194-8787232)
chr5 (595-647)||(3634608-3634661)
chr5 (478-514)||(582905-582941)
chr5 (594-647)||(13613867-13613922)
chr5 (594-647)||(21749471-21749526)
[»] chr1 (12 HSPs)
chr1 (594-647)||(49425850-49425903)
chr1 (594-647)||(8391243-8391296)
chr1 (595-647)||(5304734-5304786)
chr1 (594-647)||(48872855-48872909)
chr1 (594-647)||(5367945-5367999)
chr1 (594-647)||(31703384-31703438)
chr1 (594-647)||(7503578-7503633)
chr1 (594-647)||(31480038-31480093)
chr1 (594-647)||(45272061-45272118)
chr1 (476-506)||(22674707-22674737)
chr1 (480-514)||(26585211-26585245)
chr1 (478-506)||(1689388-1689416)
[»] chr2 (9 HSPs)
chr2 (595-647)||(7428543-7428595)
chr2 (594-647)||(26321601-26321655)
chr2 (478-514)||(10288147-10288183)
chr2 (479-514)||(14891116-14891151)
chr2 (594-644)||(16577580-16577631)
chr2 (594-647)||(45515503-45515557)
chr2 (481-514)||(3091741-3091774)
chr2 (478-514)||(6884907-6884943)
chr2 (594-647)||(19913897-19913952)
[»] chr4 (16 HSPs)
chr4 (594-647)||(22257100-22257154)
chr4 (594-648)||(51039020-51039074)
chr4 (594-647)||(30973697-30973750)
chr4 (594-647)||(54036434-54036487)
chr4 (594-647)||(36792445-36792500)
chr4 (594-647)||(9567594-9567648)
chr4 (477-511)||(35017149-35017183)
chr4 (476-506)||(40629386-40629416)
chr4 (611-648)||(51318832-51318869)
chr4 (594-647)||(1580186-1580241)
chr4 (594-647)||(6953291-6953346)
chr4 (594-647)||(31240761-31240816)
chr4 (477-505)||(41495009-41495037)
chr4 (478-506)||(43864031-43864059)
chr4 (479-511)||(47014937-47014969)
chr4 (475-511)||(51359831-51359867)
[»] chr8 (7 HSPs)
chr8 (594-647)||(28570312-28570365)
chr8 (594-647)||(28577905-28577958)
chr8 (594-647)||(45101509-45101563)
chr8 (594-647)||(9963799-9963853)
chr8 (594-647)||(30925558-30925612)
chr8 (594-647)||(37101589-37101644)
chr8 (594-647)||(42543384-42543439)
[»] chr3 (5 HSPs)
chr3 (594-647)||(43169658-43169711)
chr3 (594-647)||(44365195-44365250)
chr3 (594-647)||(51650467-51650524)
chr3 (481-514)||(1295332-1295365)
chr3 (594-647)||(31249225-31249280)
[»] chr7 (7 HSPs)
chr7 (594-647)||(19426693-19426747)
chr7 (594-647)||(22330535-22330589)
chr7 (594-647)||(47424889-47424943)
chr7 (595-647)||(7390678-7390731)
chr7 (594-647)||(7807169-7807222)
chr7 (594-647)||(28596990-28597047)
chr7 (478-506)||(45154585-45154613)
[»] chr6 (3 HSPs)
chr6 (594-648)||(25166740-25166793)
chr6 (594-642)||(32149602-32149650)
chr6 (478-506)||(20712064-20712092)
[»] scaffold0060 (1 HSPs)
scaffold0060 (594-647)||(6930-6984)
[»] scaffold0662 (1 HSPs)
scaffold0662 (479-511)||(1076-1108)
[»] scaffold0001 (1 HSPs)
scaffold0001 (611-647)||(395993-396029)


Alignment Details
Target: chr5 (Bit Score: 143; Significance: 9e-75; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 164 - 344
Target Start/End: Original strand, 27845706 - 27845886
Alignment:
Q  164 aacattttcattacacatgctatttatgtgtagcctaattcagtgagattcatttctattttaaccgattaaagaccatgtnnnnnnnnnntctattaaa 263  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||    
T  27845706 aacattttcattacacatgctatttatgtgtagcctaattcagtgagattcatttctattttaaccgattaaagaccatgtaaaaaaaaaatctattaaa 27845805  T
Q  264 taagtgtattcatgtcaattgacacgatattgttagactaaaatcttacccaaatttaaactttatatttcatagttttat 344  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27845806 taagtatattcatatcaattgacacgatattgttagactaaaatcttacccaaatttaaactttatatttcatagttttat 27845886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 27845572 - 27845721
Alignment:
Q  16 attatactagcattgagtaacaaagtatatatcatatatggctggaagaaccatcctaacaacatttttat----------------tagatcagactta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||                ||||||||||||     
T  27845572 attatactagcattgagtaacaaagtatatatcatatatggctggaagatccatcctaacaacatttttattacaaacgacggataatagatcagactt- 27845670  T
Q  100 aaacatatcaattttgaaattgaccttatgctaacaacattttcattacac 150  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  27845671 aaacatatatattttgaaattgaccttatgctaacaacattttcattacac 27845721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 335 - 511
Target Start/End: Original strand, 27845900 - 27846071
Alignment:
Q  335 atagttttatgtgtaagttttttgttgtattatgacactttgtccaaggagagnnnnnnnnngtgtattcacggtagtttgaatgatatggagtttgtaa 434  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||| ||||||||||||||||||||||||    
T  27845900 atagttttatgtgtaagttttttgttgtattatgacactttgtccaaggagag-aaaaaaaagtgtattcacggtggtttgaatgatatggagtttgtaa 27845998  T
Q  435 ccnnnnnnnnnnnnntgatatggagtttggtgcatgtatgcatatagagaaatgatatttgtacaactatttcgtga 511  Q
    |              |||||||||||||||||| |||||| ||||||| ||||||||| |||||||||| |||||||    
T  27845999 c----aaaaaaaaaatgatatggagtttggtgcctgtatgtatatagaaaaatgatatctgtacaactacttcgtga 27846071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 6515396 - 6515343
Alignment:
Q  594 ccaatgaaaagagagagaaaaaattatcaccaaaaattgtatgaaatggttgtt 647  Q
    ||||||||||||||||||||||||| ||||||| | ||||||||||||||||||    
T  6515396 ccaatgaaaagagagagaaaaaattgtcaccaacagttgtatgaaatggttgtt 6515343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 14206502 - 14206557
Alignment:
Q  594 ccaatgaaaagagagagaaaaaat--tatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||||||||||   | ||||||||||||||||||||||||||||    
T  14206502 ccaatgaaaagagagagaaaaaaaactgtcaccaaaaattgtatgaaatggttgtt 14206557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 40223743 - 40223689
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa-ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||| | |||||||| || ||||||||||||||||||||||||||||    
T  40223743 ccaatgaaaagacaaagaaaaaagttgtcaccaaaaattgtatgaaatggttgtt 40223689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 3141609 - 3141663
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa-ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| |||||| || ||| ||||| ||||||||||||||||||    
T  3141609 ccaatgaaaagagagaaaaaaaagttgtcatcaaaagttgtatgaaatggttgtt 3141663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 514
Target Start/End: Complemental strand, 8787232 - 8787194
Alignment:
Q  476 atatagagaaatgatatttgtacaactatttcgtgataa 514  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  8787232 atatagagaaatgatatttgtacaacaatttagtgataa 8787194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 595 - 647
Target Start/End: Original strand, 3634608 - 3634661
Alignment:
Q  595 caatgaaaagagagagaaaaaa-ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||||||||| || ||| ||||| ||||||| ||||||||||    
T  3634608 caatgaaaagagagagaaaaaagttgtcatcaaaagttgtatgtaatggttgtt 3634661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 514
Target Start/End: Complemental strand, 582941 - 582905
Alignment:
Q  478 atagagaaatgatatttgtacaactatttcgtgataa 514  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  582941 atagagaaatgatatttttacaactattttgtgataa 582905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 13613922 - 13613867
Alignment:
Q  594 ccaatgaaaagagagagaaaa--aattatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| ||||  |||| ||||||||| |||||||||||| |||||    
T  13613922 ccaatgaaaagagagaaaaaagaaattgtcaccaaaagttgtatgaaatgattgtt 13613867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 21749471 - 21749526
Alignment:
Q  594 ccaatgaaaagagagagaaaa--aattatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| ||||  |||| |||||||||||| ||| |||||||||||    
T  21749471 ccaatgaaaagagagaaaaaagaaattgtcaccaaaaattatataaaatggttgtt 21749526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 7e-17; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 49425850 - 49425903
Alignment:
Q  594 ccaatgaaaagagagagaaaaaattatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  49425850 ccaatgaaaagagagaaaaaaaattatcaccaaaagttgtatgaaatggttgtt 49425903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 8391296 - 8391243
Alignment:
Q  594 ccaatgaaaagagagagaaaaaattatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| ||| |||| ||||||||||||||||||||||||||||    
T  8391296 ccaatgaaaagagagaaaaagaattgtcaccaaaaattgtatgaaatggttgtt 8391243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 595 - 647
Target Start/End: Complemental strand, 5304786 - 5304734
Alignment:
Q  595 caatgaaaagagagagaaaaaattatcaccaaaaattgtatgaaatggttgtt 647  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  5304786 caatgaaaagagagaaaaaaagttgtcaccaaaaattgtatgaaatggttgtt 5304734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 48872909 - 48872855
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa-ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  48872909 ccaatgaaaagagagagaaaaaagttgtcaccaaaagttgtatgaaatggttgtt 48872855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 5367999 - 5367945
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa-ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    ||||||||||||||||| ||||| || ||||||||||||||||||||||| ||||    
T  5367999 ccaatgaaaagagagaggaaaaagttgtcaccaaaaattgtatgaaatggatgtt 5367945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 31703438 - 31703384
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa-ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| |||||| || |||||||||||||||| |||||||||||    
T  31703438 ccaatgaaaagagagaaaaaaaagttgtcaccaaaaattgtataaaatggttgtt 31703384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 7503578 - 7503633
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa--ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| ||||||  || ||||||||| ||||||||||||||||||    
T  7503578 ccaatgaaaagagagaaaaaaaaaattgtcaccaaaagttgtatgaaatggttgtt 7503633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 31480093 - 31480038
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa--ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| ||||||  || ||||||||||||||||||||| ||||||    
T  31480093 ccaatgaaaagagagaaaaaaaaagttgtcaccaaaaattgtatgaaatagttgtt 31480038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 45272118 - 45272061
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa----ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| ||||||    |||||||||||| ||||||||||||||||||    
T  45272118 ccaatgaaaagagagaaaaaaaaaaagttatcaccaaaagttgtatgaaatggttgtt 45272061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 506
Target Start/End: Original strand, 22674707 - 22674737
Alignment:
Q  476 atatagagaaatgatatttgtacaactattt 506  Q
    |||||||||||||||||||||||||||||||    
T  22674707 atatagagaaatgatatttgtacaactattt 22674737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 480 - 514
Target Start/End: Complemental strand, 26585245 - 26585211
Alignment:
Q  480 agagaaatgatatttgtacaactatttcgtgataa 514  Q
    ||||||||||||||||||||||||||| |||||||    
T  26585245 agagaaatgatatttgtacaactattttgtgataa 26585211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 506
Target Start/End: Original strand, 1689388 - 1689416
Alignment:
Q  478 atagagaaatgatatttgtacaactattt 506  Q
    |||||||||||||||||||||||||||||    
T  1689388 atagagaaatgatatttgtacaactattt 1689416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 595 - 647
Target Start/End: Original strand, 7428543 - 7428595
Alignment:
Q  595 caatgaaaagagagagaaaaaattatcaccaaaaattgtatgaaatggttgtt 647  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  7428543 caatgaaaagagagaaaaaaagttgtcaccaaaaattgtatgaaatggttgtt 7428595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 26321655 - 26321601
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa-ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| |||||| |||||||||||| |||||||||||| |||||    
T  26321655 ccaatgaaaagagagaaaaaaaagttatcaccaaaagttgtatgaaatgattgtt 26321601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 478 - 514
Target Start/End: Original strand, 10288147 - 10288183
Alignment:
Q  478 atagagaaatgatatttgtacaactatttcgtgataa 514  Q
    ||||||||||||||||||||||||||||| |||||||    
T  10288147 atagagaaatgatatttgtacaactattttgtgataa 10288183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 514
Target Start/End: Complemental strand, 14891151 - 14891116
Alignment:
Q  479 tagagaaatgatatttgtacaactatttcgtgataa 514  Q
    |||||||||||||||||||||||||||| |||||||    
T  14891151 tagagaaatgatatttgtacaactattttgtgataa 14891116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 644
Target Start/End: Original strand, 16577580 - 16577631
Alignment:
Q  594 ccaatgaaaagagagagaa-aaaattatcaccaaaaattgtatgaaatggtt 644  Q
    |||||||||||||||| || |||||| |||| ||||||||||||||||||||    
T  16577580 ccaatgaaaagagagataagaaaattgtcacaaaaaattgtatgaaatggtt 16577631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 45515557 - 45515503
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa-ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| ||| || || ||||||||| ||||||||||||||||||    
T  45515557 ccaatgaaaagagagaaaaagaagttgtcaccaaaagttgtatgaaatggttgtt 45515503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 514
Target Start/End: Original strand, 3091741 - 3091774
Alignment:
Q  481 gagaaatgatatttgtacaactatttcgtgataa 514  Q
    |||||||||||||||||||||||||| |||||||    
T  3091741 gagaaatgatatttgtacaactattttgtgataa 3091774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 514
Target Start/End: Original strand, 6884907 - 6884943
Alignment:
Q  478 atagagaaatgatatttgtacaactatttcgtgataa 514  Q
    |||||||||||||||||||||||||| || |||||||    
T  6884907 atagagaaatgatatttgtacaactaatttgtgataa 6884943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 19913897 - 19913952
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa--ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| ||||||  || ||||| ||| ||||||||||||||||||    
T  19913897 ccaatgaaaagagagaaaaaaaaagttgtcaccgaaagttgtatgaaatggttgtt 19913952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.000000000001; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 22257154 - 22257100
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa-ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  22257154 ccaatgaaaagagagagaaaaaagttgtcaccaaaagttgtatgaaatggttgtt 22257100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 648
Target Start/End: Complemental strand, 51039074 - 51039020
Alignment:
Q  594 ccaatgaaaagagagagaaaaaattatcaccaaaaattgtatgaaatggttgttt 648  Q
    |||||||||||||| | |||||||| ||||||||| |||||||||||||||||||    
T  51039074 ccaatgaaaagagaaaaaaaaaattgtcaccaaaagttgtatgaaatggttgttt 51039020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 30973697 - 30973750
Alignment:
Q  594 ccaatgaaaagagagagaaaaaattatcaccaaaaattgtatgaaatggttgtt 647  Q
    ||||| |||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  30973697 ccaataaaaagagagaaaaaaaattatcacaaaaaattgtatgaaatagttgtt 30973750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 54036487 - 54036434
Alignment:
Q  594 ccaatgaaaagagagagaaaaaattatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| ||||| || |||||||||||||||  |||||||||||    
T  54036487 ccaatgaaaagagagaaaaaaagttgtcaccaaaaattgtacaaaatggttgtt 54036434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 36792445 - 36792500
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa--ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    ||||||||||||||||||||| |  || ||||||||| ||||||||||||||||||    
T  36792445 ccaatgaaaagagagagaaaagaagttgtcaccaaaagttgtatgaaatggttgtt 36792500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 9567648 - 9567594
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa-ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||| | |||||| || |||||||||||||||| |||||||||||    
T  9567648 ccaatgaaaagagaaaaaaaaaagttgtcaccaaaaattgtataaaatggttgtt 9567594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 477 - 511
Target Start/End: Original strand, 35017149 - 35017183
Alignment:
Q  477 tatagagaaatgatatttgtacaactatttcgtga 511  Q
    |||||||||||||||||||||||||||||| ||||    
T  35017149 tatagagaaatgatatttgtacaactattttgtga 35017183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 506
Target Start/End: Complemental strand, 40629416 - 40629386
Alignment:
Q  476 atatagagaaatgatatttgtacaactattt 506  Q
    |||||||||||||||||||||||||||||||    
T  40629416 atatagagaaatgatatttgtacaactattt 40629386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 611 - 648
Target Start/End: Original strand, 51318832 - 51318869
Alignment:
Q  611 aaaaaattatcaccaaaaattgtatgaaatggttgttt 648  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  51318832 aaaaaattgtcaccaaaaattatatgaaatggttgttt 51318869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 1580241 - 1580186
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa--ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| ||||||  || |||| |||| ||||||||||||||||||    
T  1580241 ccaatgaaaagagagaaaaaaaaagttgtcacaaaaagttgtatgaaatggttgtt 1580186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 6953346 - 6953291
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa--ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    ||||||||||||||||||||| |  || ||||||||| ||||| ||||||||||||    
T  6953346 ccaatgaaaagagagagaaaagaagttgtcaccaaaagttgtaagaaatggttgtt 6953291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 31240761 - 31240816
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa--ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| |||| |  || ||||||||| ||||||||||||||||||    
T  31240761 ccaatgaaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgtt 31240816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 477 - 505
Target Start/End: Original strand, 41495009 - 41495037
Alignment:
Q  477 tatagagaaatgatatttgtacaactatt 505  Q
    |||||||||||||||||||||||||||||    
T  41495009 tatagagaaatgatatttgtacaactatt 41495037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 506
Target Start/End: Original strand, 43864031 - 43864059
Alignment:
Q  478 atagagaaatgatatttgtacaactattt 506  Q
    |||||||||||||||||||||||||||||    
T  43864031 atagagaaatgatatttgtacaactattt 43864059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 479 - 511
Target Start/End: Original strand, 47014937 - 47014969
Alignment:
Q  479 tagagaaatgatatttgtacaactatttcgtga 511  Q
    |||||||||||||||||||||||||||| ||||    
T  47014937 tagagaaatgatatttgtacaactattttgtga 47014969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 511
Target Start/End: Complemental strand, 51359867 - 51359831
Alignment:
Q  475 catatagagaaatgatatttgtacaactatttcgtga 511  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  51359867 catatagagaaatgatatttgtacaaccattttgtga 51359831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000004; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 28570365 - 28570312
Alignment:
Q  594 ccaatgaaaagagagagaaaaaattatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| || ||||| ||||||||| ||||||||||||||||||    
T  28570365 ccaatgaaaagagagaaaagaaattgtcaccaaaagttgtatgaaatggttgtt 28570312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 28577958 - 28577905
Alignment:
Q  594 ccaatgaaaagagagagaaaaaattatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| || ||||| ||||||||| ||||||||||||||||||    
T  28577958 ccaatgaaaagagagaaaagaaattgtcaccaaaagttgtatgaaatggttgtt 28577905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 45101509 - 45101563
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa-ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| |||||| || ||||||||| ||||||||||||||||||    
T  45101509 ccaatgaaaagagagaaaaaaaagttgtcaccaaaagttgtatgaaatggttgtt 45101563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 9963799 - 9963853
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa-ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| |||||| |||||| ||||| |||||| |||||||||||    
T  9963799 ccaatgaaaagagagaaaaaaaagttatcatcaaaagttgtataaaatggttgtt 9963853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 30925612 - 30925558
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa-ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| |||||| || ||||||||| |||||| |||||||||||    
T  30925612 ccaatgaaaagagagaaaaaaaagttgtcaccaaaagttgtataaaatggttgtt 30925558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 37101644 - 37101589
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa--ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| |||| |  || |||| |||||||||||||||||||||||    
T  37101644 ccaatgaaaagagagaaaaaagaagttgtcacgaaaaattgtatgaaatggttgtt 37101589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 42543439 - 42543384
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa--ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| |||| |  || ||||||||| ||||||||||||||||||    
T  42543439 ccaatgaaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgtt 42543384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000004; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 43169711 - 43169658
Alignment:
Q  594 ccaatgaaaagagagagaaaaaattatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| ||||| || ||||||||| ||||||||||||||||||    
T  43169711 ccaatgaaaagagagaaaaaaagttgtcaccaaaagttgtatgaaatggttgtt 43169658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 44365250 - 44365195
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa--ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    ||||||||||||||||||||| |  || |||||||||||||||| |||||||||||    
T  44365250 ccaatgaaaagagagagaaaagaagttgtcaccaaaaattgtataaaatggttgtt 44365195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 51650467 - 51650524
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa----ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||||||||||    || ||||||||| ||||||||||||||||||    
T  51650467 ccaatgaaaagagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgtt 51650524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 514
Target Start/End: Original strand, 1295332 - 1295365
Alignment:
Q  481 gagaaatgatatttgtacaactatttcgtgataa 514  Q
    |||||||||||||||||||||||||| |||||||    
T  1295332 gagaaatgatatttgtacaactattttgtgataa 1295365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 31249280 - 31249225
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa--ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||| | ||||||  || ||||||||| ||||||||||||||||||    
T  31249280 ccaatgaaaagagaaaaaaaaaaagttgtcaccaaaagttgtatgaaatggttgtt 31249225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 19426693 - 19426747
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa-ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| |||||| || ||||||||| ||||||||||||||||||    
T  19426693 ccaatgaaaagagagaaaaaaaagttgtcaccaaaagttgtatgaaatggttgtt 19426747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 22330589 - 22330535
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa-ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| |||||| || |||||||||||| |||||||||||||||    
T  22330589 ccaatgaaaagagagaaaaaaaagttgtcaccaaaaattatatgaaatggttgtt 22330535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 47424943 - 47424889
Alignment:
Q  594 ccaatgaaaagagag-agaaaaaattatcaccaaaaattgtatgaaatggttgtt 647  Q
    ||||| ||||||||| | |||||||| ||||||||| ||||||||||||||||||    
T  47424943 ccaataaaaagagaggaaaaaaaattgtcaccaaaagttgtatgaaatggttgtt 47424889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 595 - 647
Target Start/End: Complemental strand, 7390731 - 7390678
Alignment:
Q  595 caatgaaaagagagagaaaaaa-ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||| |||||||||| ||| || || ||||||||||||||||||||||||||||    
T  7390731 caataaaaagagagaaaaagaagttgtcaccaaaaattgtatgaaatggttgtt 7390678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 7807169 - 7807222
Alignment:
Q  594 ccaatgaaaagagagagaaaaaattatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| || || || ||| ||||| ||||||||||||||||||    
T  7807169 ccaatgaaaagagagaaaagaagttgtcatcaaaagttgtatgaaatggttgtt 7807222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 28596990 - 28597047
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa----ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||||||||||| ||||||    || ||||||||| ||||||||||||||||||    
T  28596990 ccaatgaaaagagagaaaaaaaagaatttgtcaccaaaagttgtatgaaatggttgtt 28597047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 506
Target Start/End: Complemental strand, 45154613 - 45154585
Alignment:
Q  478 atagagaaatgatatttgtacaactattt 506  Q
    |||||||||||||||||||||||||||||    
T  45154613 atagagaaatgatatttgtacaactattt 45154585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 594 - 648
Target Start/End: Original strand, 25166740 - 25166793
Alignment:
Q  594 ccaatgaaaagagagagaaaaaattatcaccaaaaattgtatgaaatggttgttt 648  Q
    |||||||||||||||| ||||| || |||| ||||||||||||||||||||||||    
T  25166740 ccaatgaaaagagaga-aaaaagttgtcacaaaaaattgtatgaaatggttgttt 25166793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 642
Target Start/End: Original strand, 32149602 - 32149650
Alignment:
Q  594 ccaatgaaaagagagagaaaaaattatcaccaaaaattgtatgaaatgg 642  Q
    |||||||||| ||| | ||||||||||||||||||||| ||||||||||    
T  32149602 ccaatgaaaaaagaaaaaaaaaattatcaccaaaaattatatgaaatgg 32149650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 506
Target Start/End: Original strand, 20712064 - 20712092
Alignment:
Q  478 atagagaaatgatatttgtacaactattt 506  Q
    |||||||||||||||||||||||||||||    
T  20712064 atagagaaatgatatttgtacaactattt 20712092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 6930 - 6984
Alignment:
Q  594 ccaatgaaaagagagagaaaaaa-ttatcaccaaaaattgtatgaaatggttgtt 647  Q
    ||||||||||||||||||||||| || || |||||| |||||| |||||||||||    
T  6930 ccaatgaaaagagagagaaaaaagttgtcgccaaaagttgtataaaatggttgtt 6984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 479 - 511
Target Start/End: Original strand, 1076 - 1108
Alignment:
Q  479 tagagaaatgatatttgtacaactatttcgtga 511  Q
    |||||||||||||||||||||||||||| ||||    
T  1076 tagagaaatgatatttgtacaactattttgtga 1108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 611 - 647
Target Start/End: Original strand, 395993 - 396029
Alignment:
Q  611 aaaaaattatcaccaaaaattgtatgaaatggttgtt 647  Q
    |||||||| |||| |||||||||||||||||||||||    
T  395993 aaaaaattgtcacaaaaaattgtatgaaatggttgtt 396029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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