View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7495_low_15 (Length: 239)
Name: NF7495_low_15
Description: NF7495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7495_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 16827290 - 16827092
Alignment:
| Q |
19 |
atatcacaaatttggccaacagatagatatggttacttttggattacacataaataagaagagacaatgttattgtacctcaaatattgaccaataatga |
118 |
Q |
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| T |
16827290 |
atatcccaaatttggccaacagatagatatggttacttttggattacacataaataagaagagacaatgttgttgtacctcaaatattgaccaataatga |
16827191 |
T |
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| Q |
119 |
cttgtgtcttgtgacaaagaaaagtgtaaacaagaatcaaggtatatatgccacgtgttttatcacttgatcccacatcattactagtctttggaccgta |
218 |
Q |
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| T |
16827190 |
ct--tgtcttgtgacaaagaaaagtgtaaataagaatcaaggtgtatatgccacgtgttttatcacttgatcccacatcattactagtctttggaccgta |
16827093 |
T |
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