View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7503_low_9 (Length: 395)
Name: NF7503_low_9
Description: NF7503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7503_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 248; Significance: 1e-137; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 89 - 377
Target Start/End: Complemental strand, 7150032 - 7149746
Alignment:
| Q |
89 |
caactagtagacatactaagattactctcaccaaaattacattcatggattatttatgcatacatctttattacaagttgatagtaaaataagatgattg |
188 |
Q |
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| T |
7150032 |
caactagtagacatactaagattactctcaccaaaattacattcatggattatttatgcatacatctttattacaagttgatagtaaaataagatgattg |
7149933 |
T |
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| Q |
189 |
acacatataattgaactttccacttacatcattaacattatatgagacattctcctctaatctaaattacttttagtaactaaatgatttgagtttgttt |
288 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
7149932 |
acacatataattgaactttccacttacatcattaacattatatgagacattctcctctaatctaaattacgtttagtaactaaatgatttgagtttgttt |
7149833 |
T |
|
| Q |
289 |
tagtnnnnnnntaaatcatatatgtttcaattgtattgtatgactattaaatataatattctctttaagttaaattctaaagttgaatc |
377 |
Q |
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|||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
7149832 |
tagtaaaaaa--aaatcatatatgtgtcaattgtattgtatgactattaaatattatattctctttaagttaaattctaaagttgaatc |
7149746 |
T |
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