View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7504_high_8 (Length: 597)
Name: NF7504_high_8
Description: NF7504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7504_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 492; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 492; E-Value: 0
Query Start/End: Original strand, 14 - 579
Target Start/End: Complemental strand, 6881901 - 6881334
Alignment:
| Q |
14 |
atatagattacttattaagtctttcgaccaaaaaagattacttattaagcaaagcactacaatgcatgaaagataatgtgcaagctttggataactggct |
113 |
Q |
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| T |
6881901 |
atatagattacttattaagtctttcgaccaaaaaagattacttattaagcaaagcactacaatgcatgaaagataatgtgcaagctttggataactggct |
6881802 |
T |
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| Q |
114 |
cattttaatgcaagataggatttctccagaaaatgcaagatacatttcttatagccttgccattgtgctaggcaatgcattaatgtaagtcatgatctta |
213 |
Q |
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| T |
6881801 |
cattttaatgcaagataggatttctccagaaaatgcaagatacatttcttatagccttgccattgtgctaggcaatgcattaatgtaagccatgatctta |
6881702 |
T |
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| Q |
214 |
taattagattgagtttgagaagaaattatgtggttggcttaaatgtattggctaaatttgacaacaaatcttaatatgtattcagtatccaaatcaatga |
313 |
Q |
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| T |
6881701 |
taattagattgagtttgagaagaaattatgtggttggcttaaatgtattggctaaatttgacaacaaatcttaatatgtattcagtatccaaatcaatga |
6881602 |
T |
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| Q |
314 |
tag-catatagactatggttgccttaaagttgatagtaaacttgttcaattctgatgtgcaattcagtactgagaattcaggttcaactgtaaccgaatc |
412 |
Q |
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| T |
6881601 |
tagacatatagactatggttgccttaaagttgatagtaaacttgttcaattctgatgtgcaattcagtactgagaattcaggttcaaccgtaaccgaatt |
6881502 |
T |
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| Q |
413 |
ctgtatttaccaaactgacatataaacaatctctctttattctactctgctcataatctcttttactcaagaatactatggagaattctctgtggcagcn |
512 |
Q |
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| T |
6881501 |
ctgtatttaccaaactgacatataaacaatctctctttattctactctgctcataatctcttttactcaagaatactatggagaattctctgtggcagca |
6881402 |
T |
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| Q |
513 |
nnnnnnnnnnnnnnntcattt-cacaattgcaatgactgaattgacaatgagaacaaaccgaaaatct |
579 |
Q |
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| T |
6881401 |
aaataaaaataaaaatcatttccacaattgcaatgactgaattgacaatgagaacaaaccgaaaatct |
6881334 |
T |
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