View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7504_low_13 (Length: 489)
Name: NF7504_low_13
Description: NF7504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7504_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 385; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 1 - 473
Target Start/End: Original strand, 34222512 - 34222985
Alignment:
| Q |
1 |
aacctaaatagttaatcagttcatctaatgatctatcaataatacaaagagacaaaatcctttttctaatgatctacaaacaaatcaagttttgattgct |
100 |
Q |
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| T |
34222512 |
aacctaaatagttaatcagttcatctaatgatctatcaataatacaaagagacaaaatcctttttctaatgatctacaaacaaatcaagttttgattgct |
34222611 |
T |
|
| Q |
101 |
atcnnnnnnnnttactacctaaaacgtaaactctgttccttgctagtaaaataataaattacaccttcaaatttgtgattgtgatgtttccatgcaaaga |
200 |
Q |
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| T |
34222612 |
accaaaaaaaattactacctaaaacgtaaactctgttccttgctagtaaaataataaattacaccttcaaatttgtgattgtgatgtttccatgcaaaga |
34222711 |
T |
|
| Q |
201 |
atatgttaaaatcatgcaattcacacattggaaaattcttagcatgcattcaatattttagcaaatttaaatcaatattttaggtgcgtgtatagtgtta |
300 |
Q |
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| T |
34222712 |
gtatgttaaaatcatgcaattcacacattggaaaattcttagcatgcattcaatattttagcaaatttaaatcaatattttaggtgcgtgtatagtgtta |
34222811 |
T |
|
| Q |
301 |
ttacacttagaatgatcgcgaattgaaattaaattaacgattaaaactaattagtaag-cnnnnnnngagattatgaagattgaagacttacaatgtgaa |
399 |
Q |
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||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||| |
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| T |
34222812 |
ttacaattagaatgatcgcgaattgaaatcaaattaacgtttaaaactaattagtaagaaaaaaaaagagattatgaagattaaagacttacaatgtgaa |
34222911 |
T |
|
| Q |
400 |
tggcgtccgaagtgacaatttggactgagtggcgaacgagtgaactcatcaagaacagaaacaggactcggttg |
473 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |
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| T |
34222912 |
tggcgtccgaagtgacaatttggactgagtggcgaacgagtgaactcgtcaagtacagaaacaggactcggttg |
34222985 |
T |
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