View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7504_low_15 (Length: 464)
Name: NF7504_low_15
Description: NF7504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7504_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 280; Significance: 1e-156; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 13 - 429
Target Start/End: Original strand, 33791829 - 33792242
Alignment:
| Q |
13 |
aaaattattatattatagatgactatgaatgtttaattatttt-gcaattacttggatttattcaaatattacattctacttaatttaattagaagtgtg |
111 |
Q |
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|||||||||||||||||||||||||||||| |||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33791829 |
aaaattattatattatagatgactatgaatttttacttttttttgcaattacttggatttattcaaatattacattctacttaatttaattagaagtgtg |
33791928 |
T |
|
| Q |
112 |
aatgataatatggagtgttcaattctatgttaaaatttggagtannnnnnn-aaaaagccaaacaaataagaaatataatacggaaaagattctcaatgt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33791929 |
aatgataatatggagtgttcaattctatgttaaaatttggagtattttttttaaaaagccaaacaaataagaaatataatacggaaaagattctcaatgt |
33792028 |
T |
|
| Q |
211 |
tattatnnnnnnnnnnnnnnnnnnnttctggcacacgtcaaaagaccttctaaaattttaaagtcattacttaagttacagatttgcgttatcaatctca |
310 |
Q |
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|||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |
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| T |
33792029 |
tattataaaaagaaacattt-----ttctcgcacacgtcaaaagaccttctaaaattttaaaatcattacttaagttacaggtttgcgttatcaatctca |
33792123 |
T |
|
| Q |
311 |
acattattaaaagaaatattagtcagcaaatttttaatctcctccgttaacacctcctcccatcaaaaaaggattcttctccaaccccatccttcacctc |
410 |
Q |
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|||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |
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| T |
33792124 |
acattattgaaagaaatattagtcagcaaatttctaatctcctccgttaacacctcctcccatcgaaaaaggattcttctccaactccatccttcacctc |
33792223 |
T |
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| Q |
411 |
atcaaccacatttaacatt |
429 |
Q |
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||||||||||||||||||| |
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| T |
33792224 |
atcaaccacatttaacatt |
33792242 |
T |
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