View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7504_low_29 (Length: 397)
Name: NF7504_low_29
Description: NF7504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7504_low_29 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 278; Significance: 1e-155; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 9 - 379
Target Start/End: Original strand, 2611680 - 2612049
Alignment:
| Q |
9 |
gaagaatatcccactcatagctaatttaattgtactctagnnnnnnnnnnnnnnnnggttaaagcaatgaaaatagaatgcaaaccaggattaaggcctg |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2611680 |
gaagaatatcccactcatagctaatttaattgtactctagttttttttttttttt-ggttaaagcaatgaaaatagaatgcaaaccaggattaaggcctg |
2611778 |
T |
|
| Q |
109 |
aacctatttacaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaactaagagtagcctgccaagaaagcatatggctgcacatgttcctaa |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| | ||| |
|
|
| T |
2611779 |
aacctatttacaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaactaagagtagcctgccaagaaaacatatggctgcatatgtccttaa |
2611878 |
T |
|
| Q |
209 |
agaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttcctaatccgctaatcaccatatttgggattgcttttgataacacc |
308 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2611879 |
agaattctaatcagatatagcatctgtaaagcaaaaaagatgaatatcaaaatttcctaatccgctaatcaccatatttgagattgcttttgataacacc |
2611978 |
T |
|
| Q |
309 |
atgtttggatcttgtagtcacaatatcagagccggtctcagtaagatctgtagagattttgtgttttgatt |
379 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||||||| |
|
|
| T |
2611979 |
atgtttggatcttgtagtcacagtatcagagccggtctcaataagatctctagaggttttgtgttttgatt |
2612049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 69 - 379
Target Start/End: Original strand, 40318405 - 40318714
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaactaaga |
168 |
Q |
| |
|
||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
40318405 |
aaagcaatgaaaataaaattcaaaccaggattaaagcctgaacctatttacaaaagagagaaaggaagccaaaggctatcctatagcaacaaaacaaagt |
40318504 |
T |
|
| Q |
169 |
gtagcctgccaagaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttcctaa |
268 |
Q |
| |
|
||||||||||||||||||||| || |||||||| | |||||||||| |||||||||||| |||| | | |||||| |||||| |||||||||||||||| |
|
|
| T |
40318505 |
gtagcctgccaagaaagcatagggttgcacatgc-cttaaagaattcaaatcagatatagcatctcttatgcaaaatagatgagtatcaaaatttcctaa |
40318603 |
T |
|
| Q |
269 |
tccgctaatcaccatatttgggattgcttttgataacaccatgtttggatcttgtagtcacaatatcagagccggtctcagtaagatctgtagagatttt |
368 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||| ||||||||| ||||||| ||||| ||||||||| ||||||||||||||| ||||| |||| |
|
|
| T |
40318604 |
tcctctaatcaccatatttgggattacttttgataatgtcatgtttggctcttgtattcacagtatcagagctagtctcagtaagatctatagaggtttt |
40318703 |
T |
|
| Q |
369 |
gtgttttgatt |
379 |
Q |
| |
|
||||||||||| |
|
|
| T |
40318704 |
gtgttttgatt |
40318714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 69 - 379
Target Start/End: Original strand, 15795853 - 15796164
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttaca--aaagagggaaaggaagccaaaggctatcctaaagcaacaaaactaa |
166 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||| ||||| | |||||| |||||| |||| |||| |||||||| ||||| ||||||||||| || |
|
|
| T |
15795853 |
aaagcaatgaaaataaaatgcaaaccatgattaaggtctgaatttgtttacacaaaagagagaaatgaagtcaaaggctttcctatagcaacaaaacaaa |
15795952 |
T |
|
| Q |
167 |
gagtagcctgccaagaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttcct |
266 |
Q |
| |
|
| ||||||||||| ||||||||| ||||||||||| ||||||||| |||||||||||||| |||| | | |||| | |||||| || | ||||||||| |
|
|
| T |
15795953 |
gtgtagcctgcca-gaaagcatagggctgcacatgcccctaaagaaatctaatcagatataacatctattatgcaacatagatgagtaacgaaatttcct |
15796051 |
T |
|
| Q |
267 |
aatccgctaatcaccatatttgggattgcttttgataacaccatgtttggatcttgtagtcacaatatcagagccggtctcagtaagatctgtagagatt |
366 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| ||||| ||||||||||||||| || |
|
|
| T |
15796052 |
aatcctctaatcatcatatttgggattgcttttgataacatcatgtttggatcttgtattcacagtatcagagccagtctcggtaagatctgtagaggtt |
15796151 |
T |
|
| Q |
367 |
ttgtgttttgatt |
379 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
15796152 |
tagtgttttgatt |
15796164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 40716196 - 40716113
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctattt--acaaaagagggaaaggaagccaaaggctatcct |
150 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||| ||||| |||||| |
|
|
| T |
40716196 |
aaagcaatgaaaataaaatgcaaaccaggattaaggcatgaacctatttacacaaaagagagaaaggaaggtaaaggttatcct |
40716113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 10150758 - 10150704
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaa |
123 |
Q |
| |
|
||||||||||||||| | ||||||| ||||||||||| ||||||| ||||||||| |
|
|
| T |
10150758 |
aaagcaatgaaaataaattgcaaactaggattaaggcttgaacctgtttacaaaa |
10150704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 40716032 - 40715991
Alignment:
| Q |
262 |
ttcctaatccgctaatcaccatatttgggattgcttttgata |
303 |
Q |
| |
|
|||||||||| |||||||| |||||| ||||||||||||||| |
|
|
| T |
40716032 |
ttcctaatcctctaatcacaatatttaggattgcttttgata |
40715991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 11)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 65 - 379
Target Start/End: Complemental strand, 43699608 - 43699293
Alignment:
| Q |
65 |
ggttaaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaact |
164 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
43699608 |
ggttaaagcaatgaaaatagaatgcaaacgaggattaaggcctgaacctgtttacaaaagaggaaaaggaagccaaaggctatcctatagcaacaaaact |
43699509 |
T |
|
| Q |
165 |
aagagtagcctgccaagaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagc-aaaaaagatgaatatcaaaattt |
263 |
Q |
| |
|
||| ||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||| | ||||||||||||||||||||||| |
|
|
| T |
43699508 |
aagtgtagcttgccaagaaagcatatggctgcacatgtccctaaagaattctaataagatatagcatctgtaaaacaaaaaaagatgaatatcaaaattt |
43699409 |
T |
|
| Q |
264 |
cctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttggatcttgtagtcacaatatcagagccggtctcagtaagatctgtagag |
363 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
43699408 |
cctaatcctctaatcaccatatttgggattgcttttaataacaccatgtttgaatcttgtactcacagtatcagagccggtctcaataagatctgtagag |
43699309 |
T |
|
| Q |
364 |
attttgtgttttgatt |
379 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
43699308 |
gttttgtgttttgatt |
43699293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 69 - 377
Target Start/End: Complemental strand, 13129367 - 13129059
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaactaaga |
168 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||| ||||||||||| ||| |
|
|
| T |
13129367 |
aaagcaatgaaaataaaatgcaaaccaggattaaggcctgaacctgtttacaaaagtaagaaaggaagccaaaggctaccctatagcaacaaaacaaagt |
13129268 |
T |
|
| Q |
169 |
gtagcctgccaagaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttcctaa |
268 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||| | |||||| | |||| |||||||||||||||| |
|
|
| T |
13129267 |
gtagcctgccaagaaagcatagggctgcacatgcccctaaagaattctaatcagatatagcatctgttatgcaaaataaatgagtatcaaaatttcctaa |
13129168 |
T |
|
| Q |
269 |
tccgctaatcaccatatttgggattgcttttgataacaccatgtttggatcttgtagtcacaatatcagagccggtctcagtaagatctgtagagatttt |
368 |
Q |
| |
|
||| |||||||||||||||||||||| ||||||| ||||||||||||||| ||||| ||||| ||| |||||| |||||| |||||||||||||| |||| |
|
|
| T |
13129167 |
tcctctaatcaccatatttgggattgattttgatgacaccatgtttggatattgtattcacagtattagagccagtctcaataagatctgtagaggtttt |
13129068 |
T |
|
| Q |
369 |
gtgttttga |
377 |
Q |
| |
|
||||||||| |
|
|
| T |
13129067 |
gtgttttga |
13129059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 69 - 379
Target Start/End: Complemental strand, 27492062 - 27491752
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaactaaga |
168 |
Q |
| |
|
||||||||||||||| ||| ||||||| ||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| ||||||||| | ||| |
|
|
| T |
27492062 |
aaagcaatgaaaataaaattcaaaccatgattaaggcttgaatctatttacaaaagagagaaaggaagccaaaggctatcctatagcaacaaagcaaagt |
27491963 |
T |
|
| Q |
169 |
gtagcctgccaagaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttcctaa |
268 |
Q |
| |
|
||||||| | ||||||||||| |||||||||||| ||||||| ||||||||||||||| |||||| | |||||| |||||| ||||||||||| |||| |
|
|
| T |
27491962 |
gtagcctactaagaaagcatagggctgcacatgtctttaaagaagtctaatcagatatagcatctgttatgcaaaatagatgagtatcaaaattttctaa |
27491863 |
T |
|
| Q |
269 |
tccgctaatcaccatatttgggattgcttttgataacaccatgtttggatcttgtagtcacaatatcagagccggtctcagtaagatctgtagagatttt |
368 |
Q |
| |
|
||| |||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||| |||||||| | |||| ||||||||||||||||||||| |
|
|
| T |
27491862 |
tcctctaatcaccatatttggggttgcttttgataacaccaagtttggatcttgtattcacagtatcagagtcagtcttagtaagatctgtagagatttt |
27491763 |
T |
|
| Q |
369 |
gtgttttgatt |
379 |
Q |
| |
|
||||||||||| |
|
|
| T |
27491762 |
gtgttttgatt |
27491752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 69 - 377
Target Start/End: Original strand, 34106296 - 34106604
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaactaaga |
168 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||| |||| |||||||||| ||| |
|
|
| T |
34106296 |
aaagcaatgaaaataaaatgcaaaccatgattaaggcctgaacctgtttacaaaagagagaaaggaagccaaaggctaccctatagcaacaaaataaagt |
34106395 |
T |
|
| Q |
169 |
gtagcctgccaagaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttcctaa |
268 |
Q |
| |
|
|| ||||||||||||||||| || |||||||| | |||||||||||||||||||||| |||||| | |||||| |||||| ||| |||| ||| ||| |
|
|
| T |
34106396 |
ataacctgccaagaaagcatagggttgcacatgcccttaaagaattctaatcagatataacatctgttatgcaaaatagatgagtataaaaaattcataa |
34106495 |
T |
|
| Q |
269 |
tccgctaatcaccatatttgggattgcttttgataacaccatgtttggatcttgtagtcacaatatcagagccggtctcagtaagatctgtagagatttt |
368 |
Q |
| |
|
||| |||||| ||||||||||||||| ||||||| ||||||||||||||||||||| ||||| |||||||||| |||||| |||||||| ||||| |||| |
|
|
| T |
34106496 |
tcctctaatccccatatttgggattgattttgatgacaccatgtttggatcttgtattcacagtatcagagccagtctcaataagatctttagaggtttt |
34106595 |
T |
|
| Q |
369 |
gtgttttga |
377 |
Q |
| |
|
||||||||| |
|
|
| T |
34106596 |
gtgttttga |
34106604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 74 - 379
Target Start/End: Complemental strand, 3526125 - 3525823
Alignment:
| Q |
74 |
aatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaactaagagtagc |
173 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| || ||||||| ||||||||||| ||| ||| | |
|
|
| T |
3526125 |
aatgaaaataaaatgcaaatcaggattaaggcctgaacctgtttacaaaagagagaaaggaagccaa-ggttatcctatagcaacaaaacaaagtgtaac |
3526027 |
T |
|
| Q |
174 |
ctgccaagaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttcctaatccgc |
273 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||| |||||||| |||||| || ||| | |||||| |||||| |||||||||||||| |||| | |
|
|
| T |
3526026 |
ctgccaagaaagcatagagctgcacatgcccctaaagaaatctaatcaaatatagcatatgttatgcaaaatagatgagtatcaaaatttcctgatcctc |
3525927 |
T |
|
| Q |
274 |
taatcaccatatttgggattgcttttgataacaccatgtttggatcttgtagtcacaatatcagagccggtctcagtaagatctgtagagattttgtgtt |
373 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||| || ||||||| |
|
|
| T |
3525926 |
taatcaccatatctaggattgcttttgataacaccatgtttggatcttgtattcacagtatcagagccaatctcagtaagatctgtagcga--ttgtgtt |
3525829 |
T |
|
| Q |
374 |
ttgatt |
379 |
Q |
| |
|
|||||| |
|
|
| T |
3525828 |
ttgatt |
3525823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 69 - 379
Target Start/End: Complemental strand, 52316302 - 52316005
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaactaaga |
168 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||| ||||||| |||||||||||| |||| ||| ||||||||||||||| ||||||||||| ||| |
|
|
| T |
52316302 |
aaagcaatgaaaataacatgcaaatcaggattaaggcatgaacctgtttacaaaagagagaaacgaaaccaaaggctatcctatagcaacaaaacaaagt |
52316203 |
T |
|
| Q |
169 |
gtagcctgccaagaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttcctaa |
268 |
Q |
| |
|
||| | ||||||||||||||| ||||||||||| ||||||||| | |||||||||| || || ||| | ||| |||||||||||||| |
|
|
| T |
52316202 |
gtaacttgccaagaaagcatagggctgcacatgcccctaaagaaatataatcagataaagcatttgttatgca-------------tcaaaatttcctaa |
52316116 |
T |
|
| Q |
269 |
tccgctaatcaccatatttgggattgcttttgataacaccatgtttggatcttgtagtcacaatatcagagccggtctcagtaagatctgtagagatttt |
368 |
Q |
| |
|
||| ||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||| |||||||||||| | |||| |
|
|
| T |
52316115 |
tcctctaatcaccatatctaggattgcttttgataacaccatgtttggatcttgtattcacagtatcagagccagtctcaataagatctgtagcggtttt |
52316016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 191 - 379
Target Start/End: Complemental strand, 41114597 - 41114409
Alignment:
| Q |
191 |
ggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttcctaatccgctaatcaccatatttggg |
290 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
41114597 |
ggctgcacatgtccctaaagaattctaatcagatatagcatctgtaaaacaaaaaagttgaatatcaaaatttcctaatcctctaatcaccatatttggg |
41114498 |
T |
|
| Q |
291 |
attgcttttgataacaccatgtttggatcttgtagtcacaatatcagagccggtctcagtaagatctgtagagattttgtgttttgatt |
379 |
Q |
| |
|
||| |||||||||||||||| ||||||||||||| ||||| ||||||||||| |||||| |||||||| |||| ||||||||||||||| |
|
|
| T |
41114497 |
attacttttgataacaccatatttggatcttgtattcacagtatcagagccgatctcagaaagatctgcagaggttttgtgttttgatt |
41114409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 140 - 349
Target Start/End: Complemental strand, 11084748 - 11084539
Alignment:
| Q |
140 |
aaggctatcctaaagcaacaaaactaagagtagcctgccaagaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaag |
239 |
Q |
| |
|
||||||| |||| ||||||||||| ||| ||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||| |||||| | | |
|
|
| T |
11084748 |
aaggctaccctatagcaacaaaacaaagtgtagcctgccaagaaagcataggactgcacatgcccctaaagaattctaatcagatatagcatctgttatg |
11084649 |
T |
|
| Q |
240 |
caaaaaagatgaatatcaaaatttcctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttggatcttgtagtcacaatatcagag |
339 |
Q |
| |
|
||||| |||||| ||||||||||||||||||| | ||||||||||||| |||||| ||||||| |||||||||||||||||| || ||||| |||||||| |
|
|
| T |
11084648 |
caaaatagatgagtatcaaaatttcctaatcctccaatcaccatatttaggattgattttgatgacaccatgtttggatcttatattcacagtatcagag |
11084549 |
T |
|
| Q |
340 |
ccggtctcag |
349 |
Q |
| |
|
| ||||||| |
|
|
| T |
11084548 |
gcagtctcag |
11084539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 68 - 192
Target Start/End: Complemental strand, 41114745 - 41114623
Alignment:
| Q |
68 |
taaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaactaag |
167 |
Q |
| |
|
||||||||| |||||||||||||||||||||| |||| |||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
41114745 |
taaagcaatcaaaatagaatgcaaaccaggat-aaggtctgaacctgtttacaaaagagggaa-ggaagccaaaggctatcctatagcaacaaaactaag |
41114648 |
T |
|
| Q |
168 |
agtagcctgccaagaaagcatatgg |
192 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
41114647 |
tgtagcctgccaagaaagcatatgg |
41114623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 183
Target Start/End: Original strand, 45602846 - 45602957
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaactaaga |
168 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||| |||| ||||| |||||||||||| ||||||| |||||| ||||||| | ||| ||||| ||| |
|
|
| T |
45602846 |
aaagcaatgaaaataaaatgcaaatcaggattaaagcctcaacctgtttacaaaagagagaaagga---caaaggatatcctatatcaataaaacaaagt |
45602942 |
T |
|
| Q |
169 |
gtagcctgccaagaa |
183 |
Q |
| |
|
||| | ||||||||| |
|
|
| T |
45602943 |
gtaacttgccaagaa |
45602957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 112
Target Start/End: Complemental strand, 11084816 - 11084773
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacc |
112 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
11084816 |
aaagcaatgaaaataaaatgcaaaccaggattaaggcctgaacc |
11084773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 65 - 379
Target Start/End: Complemental strand, 21203512 - 21203203
Alignment:
| Q |
65 |
ggttaaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaact |
164 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| | |
|
|
| T |
21203512 |
ggttaaagcaatgaaaataaaatgcaaatcaggattaaggcctgaacctatttacaaaagagg-aaaggaaggcaaaggctatcctatagcaacaaaagt |
21203414 |
T |
|
| Q |
165 |
aagagtagcctgccaagaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttc |
264 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||| || ||| |||||||||||||||||||||||||||| |
|
|
| T |
21203413 |
----gtagcctgccaagaaagcttatggctgcacatgtccctaaagaattctaatcatatatagcatgtgtgaagcaaaaaagatgaatatcaaaatttc |
21203318 |
T |
|
| Q |
265 |
ctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttggatcttgtagtcacaatatcagagccggtctcagtaagatctgtagaga |
364 |
Q |
| |
|
||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
21203317 |
ctaatcctctaatcatcatatttgggattgcttttgataacaccatgtttggatctagtattcacagtatcagagccaatctcagtaagatctgtagagg |
21203218 |
T |
|
| Q |
365 |
ttttgtgttttgatt |
379 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
21203217 |
ttttgtgttttgatt |
21203203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 21949749 - 21949800
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttaca |
120 |
Q |
| |
|
|||||||| |||||| |||| |||||||||||||||||||||||| |||||| |
|
|
| T |
21949749 |
aaagcaatcaaaataaaatgaaaaccaggattaaggcctgaacctgtttaca |
21949800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 308
Target Start/End: Original strand, 21949822 - 21949927
Alignment:
| Q |
204 |
cctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttcctaatccgctaatcacca-tatttgggattgcttttgat |
302 |
Q |
| |
|
|||||||||||||||||||| |||||| | || | | || | ||||||||||| |||||||||| |||||||| | |||||||||||||||||||| |
|
|
| T |
21949822 |
cctaaagaattctaatcagacatagtagcagttttgtagaatatttgaatatcaaatcttcctaatcctctaatcacaaatatttgggattgcttttgat |
21949921 |
T |
|
| Q |
303 |
aacacc |
308 |
Q |
| |
|
||||| |
|
|
| T |
21949922 |
tacacc |
21949927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 280
Target Start/End: Complemental strand, 45212962 - 45212798
Alignment:
| Q |
118 |
acaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaact-aagagtagcctgccaag-aaagcatatggctgcacatgttcctaaagaattc |
215 |
Q |
| |
|
||||||||| |||||||||||||| | ||||||| |||||||||| | ||||||| ||||||| | |||||| | ||| | ||| |||| ||||| |
|
|
| T |
45212962 |
acaaaagagagaaaggaagccaaatgatatcctatagcaacaaaaataaagagtaacctgccatgaaaagcaaagggccgtgcatacctttaaaaaattc |
45212863 |
T |
|
| Q |
216 |
taatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttcctaatccgctaatcac |
280 |
Q |
| |
|
||||||| |||| |||||| | |||||| | |||| ||||||| |||||||||| |||||||| |
|
|
| T |
45212862 |
taatcaggcatagcatctgttatgcaaaatatatgagtatcaaaccttcctaatcctctaatcac |
45212798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 69 - 377
Target Start/End: Complemental strand, 41310130 - 41309822
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaactaaga |
168 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||| ||||||| ||||||||||| |||| ||||||||||| ||| |
|
|
| T |
41310130 |
aaagcaatgaaaataaaatgcaaaccaggattaaggcttgaacctgtttacaaaagagagaaaggacgccaaaggctaccctatagcaacaaaacaaagt |
41310031 |
T |
|
| Q |
169 |
gtagcctgccaagaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttcctaa |
268 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||| | |||||| |||||| |||||||||||||||| |
|
|
| T |
41310030 |
gtagcctgccaagaaagcatagggctgcacatgcccctaaagaattctaatcagatatagcatctgttatgcaaaatagatgagtatcaaaatttcctaa |
41309931 |
T |
|
| Q |
269 |
tccgctaatcaccatatttgggattgcttttgataacaccatgtttggatcttgtagtcacaatatcagagccggtctcagtaagatctgtagagatttt |
368 |
Q |
| |
|
||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
41309930 |
tcctctaatcaccatatttgggattgattttgattacaccatgtttggatcttgtattcacagtatcagagccagtctcagtaagatctgtagaggtttt |
41309831 |
T |
|
| Q |
369 |
gtgttttga |
377 |
Q |
| |
|
||||||||| |
|
|
| T |
41309830 |
gtgttttga |
41309822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 85 - 379
Target Start/End: Original strand, 34160855 - 34161149
Alignment:
| Q |
85 |
aatgcaaaccaggattaaggcctgaacctatttacaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaactaagagtagcctgccaagaaa |
184 |
Q |
| |
|
|||||||| || |||||||||||| | | |||||||||||| |||||||||||||| ||||||||| ||||||||||| ||| ||| | |||||||||| |
|
|
| T |
34160855 |
aatgcaaatcattattaaggcctgagcatgtttacaaaagagagaaaggaagccaaaagctatcctatagcaacaaaacaaagtgtaacttgccaagaaa |
34160954 |
T |
|
| Q |
185 |
gcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttcctaatccgctaatcaccata |
284 |
Q |
| |
|
||||| || |||||||| ||||||||| |||||||||||| || || |||||||||||| |||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
34160955 |
gcatagggttgcacatgcccctaaagaaatctaatcagataaagcatatgtaaagcaaaatagatgagtatcaaaatttcctaatcctctaatcaccata |
34161054 |
T |
|
| Q |
285 |
tttgggattgcttttgataacaccatgtttggatcttgtagtcacaatatcagagccggtctcagtaagatctgtagagattttgtgttttgatt |
379 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||| | |||| || ||||||||| | ||||||||||||||| |
|
|
| T |
34161055 |
tttaggattgcttttgataacaccatgtttggatcttgtattcacagcatcagagccagactcaataggatctgtagcggttttgtgttttgatt |
34161149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 69 - 317
Target Start/End: Complemental strand, 2049264 - 2049015
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctattt--acaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaactaa |
166 |
Q |
| |
|
||||||||||||||| || ||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||| |
|
|
| T |
2049264 |
aaagcaatgaaaatataaagcaaatcaggattaaggcctgaacctatttgcacaaaagagagaaaggaagccaaaggctatcctatagcaacaaaac--- |
2049168 |
T |
|
| Q |
167 |
gagtagcctgccaagaaagcatatggctgcacatgttcctaaagaa--ttctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttc |
264 |
Q |
| |
|
||||||||||||| |||| | | |||| || || ||||||||| ||||||||||| |||| | ||| | |||||| | |||| ||||||| ||| |
|
|
| T |
2049167 |
gagtagcctgccatgaaaacgaagggctacatatacccctaaagaattttctaatcagacatagcagatgttatgcaaaatacatgagtatcaaaccttc |
2049068 |
T |
|
| Q |
265 |
ctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttgga |
317 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||||||| | |||||| |
|
|
| T |
2049067 |
ctaatcctctaatcacaatatttgggattgcttttgataacaccctttttgga |
2049015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 12763218 - 12763332
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctattt--acaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaactaa |
166 |
Q |
| |
|
||||||||||||||| || ||||| |||||||||||||||||||| ||| ||||||||| |||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
12763218 |
aaagcaatgaaaatataaagcaaatcaggattaaggcctgaacctgtttacacaaaagagagaaaggaagccaaaagctatcctatagcaacaaaac--- |
12763314 |
T |
|
| Q |
167 |
gagtagcctgccaagaaa |
184 |
Q |
| |
|
||||||||||||| |||| |
|
|
| T |
12763315 |
gagtagcctgccatgaaa |
12763332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 10457425 - 10457479
Alignment:
| Q |
72 |
gcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaagag |
126 |
Q |
| |
|
||||||| |||| |||||||| |||||||||||||||||||| |||||| ||||| |
|
|
| T |
10457425 |
gcaatgagaataaaatgcaaatcaggattaaggcctgaacctgtttacacaagag |
10457479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 69 - 379
Target Start/End: Original strand, 34466623 - 34466930
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaactaaga |
168 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| || ||||||| |||||||||||| |||||||||||||||||||||||| | |||||||| || |
|
|
| T |
34466623 |
aaagcaatgaaaataaaatgcaaaccaggattaaagcatgaacctgtttacaaaagagagaaaggaagccaaaggctatcctataacaacaaaa---agt |
34466719 |
T |
|
| Q |
169 |
gtagcctgccaagaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttcctaa |
268 |
Q |
| |
|
||||||||| | ||||||||| |||||||||| ||||||||| |||||| |||||||| |||||| | |||||| |||||| |||||||||||||||| |
|
|
| T |
34466720 |
gtagcctgctatgaaagcatagagctgcacatgcccctaaagaaatctaattagatatagcatctgttatgcaaaatagatgagtatcaaaatttcctaa |
34466819 |
T |
|
| Q |
269 |
tccgctaatcaccatatttgggattgcttttgataacaccatgtttggatcttgtagtcacaatatcagagccggtctcagtaagatctgtagagatttt |
368 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||| |||| | |||||||||||||||||||||||||| |
|
|
| T |
34466820 |
tcctctaatcaccatatttgggattgcttttgataacatcatgtttggatcttgtattcacagtatgagagtcagtctcagtaagatctgtagagatttt |
34466919 |
T |
|
| Q |
369 |
gtgttttgatt |
379 |
Q |
| |
|
||||||||||| |
|
|
| T |
34466920 |
gtgttttgatt |
34466930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 51499657 - 51499785
Alignment:
| Q |
72 |
gcaatgaaaatagaatgcaaaccaggattaaggcctgaacctattt--acaaaagagggaaaggaagccaaaggctatcctaaagcaac-aaaactaaga |
168 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| || ||| |||||||| ||||||||||| ||||||||||| | |||| ||||| |||| |
|
|
| T |
51499657 |
gcaatgaaaataaaatgcaaaccaggattaaggcctgaatctgtttacacaaaagaaagaaaggaagcctaaggctatcctttatcaacaaaaacaaaga |
51499756 |
T |
|
| Q |
169 |
gtagcctgccaagaaagcatatggctgca |
197 |
Q |
| |
|
| ||||||||| |||||| | ||||||| |
|
|
| T |
51499757 |
ggagcctgccataaaagcaaagggctgca |
51499785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 76 - 162
Target Start/End: Original strand, 3847675 - 3847763
Alignment:
| Q |
76 |
tgaaaatagaatgcaaaccaggattaaggcctgaacctatttac--aaaagagggaaaggaagccaaaggctatcctaaagcaacaaaa |
162 |
Q |
| |
|
|||||||| | ||||||| ||||||||||||||| ||| ||||| |||||| |||||||||| | |||||||||||| |||||||||| |
|
|
| T |
3847675 |
tgaaaataaattgcaaactaggattaaggcctgaccctgtttacaaaaaagaaggaaaggaagtctaaggctatcctatagcaacaaaa |
3847763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 183; Significance: 7e-99; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 65 - 375
Target Start/End: Complemental strand, 37370650 - 37370340
Alignment:
| Q |
65 |
ggttaaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaact |
164 |
Q |
| |
|
||||||||||||||||||| |||||||| ||| ||||| ||||| |||||||||||||||| |||||||||| |||| |||||||| | |||||||||| |
|
|
| T |
37370650 |
ggttaaagcaatgaaaataaaatgcaaatcagtattaatacctgagcctatttacaaaagagtgaaaggaagctaaagactatcctataacaacaaaact |
37370551 |
T |
|
| Q |
165 |
aagagtagcctgccaagaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttc |
264 |
Q |
| |
|
||| |||||||||||| |||| |||||||| || |||| |||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
37370550 |
aagtgtagcctgccaataaagaatatggcttcaaatgtccctacagaaatctaatcagatatagcatctgtaaagcaaaaaagatgaatatcaaaatttc |
37370451 |
T |
|
| Q |
265 |
ctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttggatcttgtagtcacaatatcagagccggtctcagtaagatctgtagaga |
364 |
Q |
| |
|
||||||| ||||||| |||||||||||||| |||||||||||||||||||| |||||||| ||| | |||||||| | |||||| |||||| ||||||| |
|
|
| T |
37370450 |
ctaatcctctaatcatcatatttgggattgtttttgataacaccatgtttgaatcttgtattcatattatcagagtcagtctcaataagatttgtagagg |
37370351 |
T |
|
| Q |
365 |
ttttgtgtttt |
375 |
Q |
| |
|
||||||||||| |
|
|
| T |
37370350 |
ttttgtgtttt |
37370340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 34484095 - 34483856
Alignment:
| Q |
73 |
caatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaactaagagtag |
172 |
Q |
| |
|
|||| |||||| |||||||||||| ||||||| ||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| ||| ||| |
|
|
| T |
34484095 |
caataaaaataaaatgcaaaccagaattaaggtctgaacctatttacaaaagagagaaaggaagcctaaggctatcctatagcaacaaaacaaagtgtaa |
34483996 |
T |
|
| Q |
173 |
cctgccaagaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttcctaatccg |
272 |
Q |
| |
|
| ||||||| ||||||| |||||||||||| | ||| || |||||||||||| || |||| | | | |||| |||||| |||||||||||| || ||| |
|
|
| T |
34483995 |
catgccaaggaagcataaggctgcacatgtctcaaaaaaaatctaatcagataaagcatctattatgtaaaatagatgagtatcaaaatttcatattcct |
34483896 |
T |
|
| Q |
273 |
ctaatcaccatatttgggattgcttttgataacaccatgt |
312 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
34483895 |
ctaatcaccatatctaggattgcttttgataacaccatgt |
34483856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 98 - 317
Target Start/End: Complemental strand, 38836390 - 38836170
Alignment:
| Q |
98 |
attaaggcctgaacctatttaca--aaagagggaaaggaagccaaaggctatcctaaagcaacaaaactaagagtagcctgccaagaaagcatatggctg |
195 |
Q |
| |
|
||||||| |||||||| |||||| |||||| |||||||||||||||||||||||| ||||||||||| |||||||||| || |||| | | |||| |
|
|
| T |
38836390 |
attaaggtctgaacctgtttacacaaaagagagaaaggaagccaaaggctatcctatagcaacaaaac---gagtagcctgtcatgaaaacgaagggcta |
38836294 |
T |
|
| Q |
196 |
cacatgttcctaaagaattct--aatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttcctaatccgctaatcaccatatttgggatt |
293 |
Q |
| |
|
|| || || |||||||||| ||||||| ||| || ||| | |||||| | |||| ||||||| |||||||||| |||||||| |||||||||||| |
|
|
| T |
38836293 |
catataccccaaaagaattctctaatcagacatatcatatgttatgcaaaatacatgagtatcaaatcttcctaatcctctaatcacaatatttgggatt |
38836194 |
T |
|
| Q |
294 |
gcttttgataacaccatgtttgga |
317 |
Q |
| |
|
||||||||||||||||| |||||| |
|
|
| T |
38836193 |
gcttttgataacaccatttttgga |
38836170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 117 - 317
Target Start/End: Original strand, 49094381 - 49094584
Alignment:
| Q |
117 |
tacaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaa-ctaagagtagcctgccaagaaa-gcatatggctgcacatgttcctaaagaatt |
214 |
Q |
| |
|
|||||||||| |||| ||| ||||||| ||||||| |||||||||| | ||||||| |||| || |||| ||| |||||||||| | ||||||||||| |
|
|
| T |
49094381 |
tacaaaagagagaaaagaaaccaaaggttatcctatagcaacaaaaacaaagagtatcctggcatgaaaagcaaatggctgcacgtacccctaaagaatt |
49094480 |
T |
|
| Q |
215 |
ctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttcctaatccgctaatcacca-tatttgggattgcttttgataacaccatgtt |
313 |
Q |
| |
|
||| || || |||| | || | | |||||| | |||| || |||| |||||||||| |||||||| | |||||||||||||||||||||||||| | || |
|
|
| T |
49094481 |
ctactctgacatagcaactattatgcaaaatatatgagtaccaaaccttcctaatcctctaatcacaaatatttgggattgcttttgataacaccttttt |
49094580 |
T |
|
| Q |
314 |
tgga |
317 |
Q |
| |
|
|||| |
|
|
| T |
49094581 |
tgga |
49094584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 39540610 - 39540534
Alignment:
| Q |
87 |
tgcaaaccaggattaaggcctgaacctattt--acaaaagagggaaaggaagccaaaggctatcctaaagcaacaaa |
161 |
Q |
| |
|
||||||||||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||| ||||||||| |
|
|
| T |
39540610 |
tgcaaaccaggattaaggcctgaacctttttacacaaaagaaataaaggaagcctaaggctatcctatagcaacaaa |
39540534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 144; Significance: 1e-75; HSPs: 17)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 73 - 336
Target Start/End: Complemental strand, 8859411 - 8859148
Alignment:
| Q |
73 |
caatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaactaagagtag |
172 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||||| || |||||||||||| |||||||||||||||||||||||| || |||||||| ||| |||| |
|
|
| T |
8859411 |
caatgaaaataaaatgcaaattaggattaaggcctgaatctgtttacaaaagagagaaaggaagccaaaggctatcctatagaaacaaaacaaagtgtag |
8859312 |
T |
|
| Q |
173 |
cctgccaagaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttcctaatccg |
272 |
Q |
| |
|
||| ||||||||||||| ||||||||||| ||||| ||| |||||| |||||||| |||||| | |||||| | || | ||||||||||||||||||| |
|
|
| T |
8859311 |
cctaccaagaaagcatagggctgcacatgcccctaatgaaatctaataagatatagcatctgttatgcaaaataaataagtatcaaaatttcctaatcct |
8859212 |
T |
|
| Q |
273 |
ctaatcaccatatttgggattgcttttgataacaccatgtttggatcttgtagtcacaatatca |
336 |
Q |
| |
|
|||||||| |||| | |||||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
8859211 |
ctaatcacaatatctaggattgcttttgataacaccatgtttggatcttgtattcacagtatca |
8859148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 317
Target Start/End: Original strand, 5764362 - 5764614
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaa--gagggaaaggaagccaaaggctatcctaaagcaac-aaaacta |
165 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||||| |||||| || ||| |||||||||||||||||||||||| |||||| ||||| | |
|
|
| T |
5764362 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5764461 |
T |
|
| Q |
166 |
agagtagcctgcca-agaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttc |
264 |
Q |
| |
|
|||||||||||||| | ||| || | |||| || || | |||||||||||||||||||| |||| | ||| | |||||| | || | ||||||| ||| |
|
|
| T |
5764462 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5764561 |
T |
|
| Q |
265 |
ctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttgga |
317 |
Q |
| |
|
||||||| ||||| || ||||||| ||||| |||| |||||||||| |||||| |
|
|
| T |
5764562 |
ctaatcctctaattacaatatttgagattgttttttataacaccatttttgga |
5764614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 317
Target Start/End: Original strand, 5767897 - 5768149
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaa--gagggaaaggaagccaaaggctatcctaaagcaac-aaaacta |
165 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||||| |||||| || ||| |||||||||||||||||||||||| |||||| ||||| | |
|
|
| T |
5767897 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5767996 |
T |
|
| Q |
166 |
agagtagcctgcca-agaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttc |
264 |
Q |
| |
|
|||||||||||||| | ||| || | |||| || || | |||||||||||||||||||| |||| | ||| | |||||| | || | ||||||| ||| |
|
|
| T |
5767997 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5768096 |
T |
|
| Q |
265 |
ctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttgga |
317 |
Q |
| |
|
||||||| ||||| || ||||||| ||||| |||| |||||||||| |||||| |
|
|
| T |
5768097 |
ctaatcctctaattacaatatttgagattgttttttataacaccatttttgga |
5768149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 317
Target Start/End: Original strand, 5771432 - 5771684
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaa--gagggaaaggaagccaaaggctatcctaaagcaac-aaaacta |
165 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||||| |||||| || ||| |||||||||||||||||||||||| |||||| ||||| | |
|
|
| T |
5771432 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5771531 |
T |
|
| Q |
166 |
agagtagcctgcca-agaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttc |
264 |
Q |
| |
|
|||||||||||||| | ||| || | |||| || || | |||||||||||||||||||| |||| | ||| | |||||| | || | ||||||| ||| |
|
|
| T |
5771532 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5771631 |
T |
|
| Q |
265 |
ctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttgga |
317 |
Q |
| |
|
||||||| ||||| || ||||||| ||||| |||| |||||||||| |||||| |
|
|
| T |
5771632 |
ctaatcctctaattacaatatttgagattgttttttataacaccatttttgga |
5771684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 317
Target Start/End: Original strand, 5774967 - 5775219
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaa--gagggaaaggaagccaaaggctatcctaaagcaac-aaaacta |
165 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||||| |||||| || ||| |||||||||||||||||||||||| |||||| ||||| | |
|
|
| T |
5774967 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5775066 |
T |
|
| Q |
166 |
agagtagcctgcca-agaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttc |
264 |
Q |
| |
|
|||||||||||||| | ||| || | |||| || || | |||||||||||||||||||| |||| | ||| | |||||| | || | ||||||| ||| |
|
|
| T |
5775067 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5775166 |
T |
|
| Q |
265 |
ctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttgga |
317 |
Q |
| |
|
||||||| ||||| || ||||||| ||||| |||| |||||||||| |||||| |
|
|
| T |
5775167 |
ctaatcctctaattacaatatttgagattgttttttataacaccatttttgga |
5775219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 317
Target Start/End: Original strand, 5778502 - 5778754
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaa--gagggaaaggaagccaaaggctatcctaaagcaac-aaaacta |
165 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||||| |||||| || ||| |||||||||||||||||||||||| |||||| ||||| | |
|
|
| T |
5778502 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5778601 |
T |
|
| Q |
166 |
agagtagcctgcca-agaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttc |
264 |
Q |
| |
|
|||||||||||||| | ||| || | |||| || || | |||||||||||||||||||| |||| | ||| | |||||| | || | ||||||| ||| |
|
|
| T |
5778602 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5778701 |
T |
|
| Q |
265 |
ctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttgga |
317 |
Q |
| |
|
||||||| ||||| || ||||||| ||||| |||| |||||||||| |||||| |
|
|
| T |
5778702 |
ctaatcctctaattacaatatttgagattgttttttataacaccatttttgga |
5778754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 317
Target Start/End: Original strand, 5782037 - 5782289
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaa--gagggaaaggaagccaaaggctatcctaaagcaac-aaaacta |
165 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||||| |||||| || ||| |||||||||||||||||||||||| |||||| ||||| | |
|
|
| T |
5782037 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5782136 |
T |
|
| Q |
166 |
agagtagcctgcca-agaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttc |
264 |
Q |
| |
|
|||||||||||||| | ||| || | |||| || || | |||||||||||||||||||| |||| | ||| | |||||| | || | ||||||| ||| |
|
|
| T |
5782137 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5782236 |
T |
|
| Q |
265 |
ctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttgga |
317 |
Q |
| |
|
||||||| ||||| || ||||||| ||||| |||| |||||||||| |||||| |
|
|
| T |
5782237 |
ctaatcctctaattacaatatttgagattgttttttataacaccatttttgga |
5782289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 317
Target Start/End: Original strand, 5785572 - 5785824
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaa--gagggaaaggaagccaaaggctatcctaaagcaac-aaaacta |
165 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||||| |||||| || ||| |||||||||||||||||||||||| |||||| ||||| | |
|
|
| T |
5785572 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5785671 |
T |
|
| Q |
166 |
agagtagcctgcca-agaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttc |
264 |
Q |
| |
|
|||||||||||||| | ||| || | |||| || || | |||||||||||||||||||| |||| | ||| | |||||| | || | ||||||| ||| |
|
|
| T |
5785672 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5785771 |
T |
|
| Q |
265 |
ctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttgga |
317 |
Q |
| |
|
||||||| ||||| || ||||||| ||||| |||| |||||||||| |||||| |
|
|
| T |
5785772 |
ctaatcctctaattacaatatttgagattgttttttataacaccatttttgga |
5785824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 317
Target Start/End: Original strand, 5789107 - 5789359
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaa--gagggaaaggaagccaaaggctatcctaaagcaac-aaaacta |
165 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||||| |||||| || ||| |||||||||||||||||||||||| |||||| ||||| | |
|
|
| T |
5789107 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5789206 |
T |
|
| Q |
166 |
agagtagcctgcca-agaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttc |
264 |
Q |
| |
|
|||||||||||||| | ||| || | |||| || || | |||||||||||||||||||| |||| | ||| | |||||| | || | ||||||| ||| |
|
|
| T |
5789207 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5789306 |
T |
|
| Q |
265 |
ctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttgga |
317 |
Q |
| |
|
||||||| ||||| || ||||||| ||||| |||| |||||||||| |||||| |
|
|
| T |
5789307 |
ctaatcctctaattacaatatttgagattgttttttataacaccatttttgga |
5789359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 317
Target Start/End: Original strand, 5792642 - 5792894
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaa--gagggaaaggaagccaaaggctatcctaaagcaac-aaaacta |
165 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||||| |||||| || ||| |||||||||||||||||||||||| |||||| ||||| | |
|
|
| T |
5792642 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5792741 |
T |
|
| Q |
166 |
agagtagcctgcca-agaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttc |
264 |
Q |
| |
|
|||||||||||||| | ||| || | |||| || || | |||||||||||||||||||| |||| | ||| | |||||| | || | ||||||| ||| |
|
|
| T |
5792742 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5792841 |
T |
|
| Q |
265 |
ctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttgga |
317 |
Q |
| |
|
||||||| ||||| || ||||||| ||||| |||| |||||||||| |||||| |
|
|
| T |
5792842 |
ctaatcctctaattacaatatttgagattgttttttataacaccatttttgga |
5792894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 317
Target Start/End: Original strand, 5796177 - 5796429
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaa--gagggaaaggaagccaaaggctatcctaaagcaac-aaaacta |
165 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||||| |||||| || ||| |||||||||||||||||||||||| |||||| ||||| | |
|
|
| T |
5796177 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5796276 |
T |
|
| Q |
166 |
agagtagcctgcca-agaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttc |
264 |
Q |
| |
|
|||||||||||||| | ||| || | |||| || || | |||||||||||||||||||| |||| | ||| | |||||| | || | ||||||| ||| |
|
|
| T |
5796277 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5796376 |
T |
|
| Q |
265 |
ctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttgga |
317 |
Q |
| |
|
||||||| ||||| || ||||||| ||||| |||| |||||||||| |||||| |
|
|
| T |
5796377 |
ctaatcctctaattacaatatttgagattgttttttataacaccatttttgga |
5796429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 317
Target Start/End: Original strand, 5799712 - 5799964
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaa--gagggaaaggaagccaaaggctatcctaaagcaac-aaaacta |
165 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||||| |||||| || ||| |||||||||||||||||||||||| |||||| ||||| | |
|
|
| T |
5799712 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5799811 |
T |
|
| Q |
166 |
agagtagcctgcca-agaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttc |
264 |
Q |
| |
|
|||||||||||||| | ||| || | |||| || || | |||||||||||||||||||| |||| | ||| | |||||| | || | ||||||| ||| |
|
|
| T |
5799812 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5799911 |
T |
|
| Q |
265 |
ctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttgga |
317 |
Q |
| |
|
||||||| ||||| || ||||||| ||||| |||| |||||||||| |||||| |
|
|
| T |
5799912 |
ctaatcctctaattacaatatttgagattgttttttataacaccatttttgga |
5799964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 317
Target Start/End: Original strand, 5803247 - 5803499
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaa--gagggaaaggaagccaaaggctatcctaaagcaac-aaaacta |
165 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||||| |||||| || ||| |||||||||||||||||||||||| |||||| ||||| | |
|
|
| T |
5803247 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5803346 |
T |
|
| Q |
166 |
agagtagcctgcca-agaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttc |
264 |
Q |
| |
|
|||||||||||||| | ||| || | |||| || || | |||||||||||||||||||| |||| | ||| | |||||| | || | ||||||| ||| |
|
|
| T |
5803347 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5803446 |
T |
|
| Q |
265 |
ctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttgga |
317 |
Q |
| |
|
||||||| ||||| || ||||||| ||||| |||| |||||||||| |||||| |
|
|
| T |
5803447 |
ctaatcctctaattacaatatttgagattgttttttataacaccatttttgga |
5803499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 317
Target Start/End: Original strand, 5806782 - 5807034
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaa--gagggaaaggaagccaaaggctatcctaaagcaac-aaaacta |
165 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||||| |||||| || ||| |||||||||||||||||||||||| |||||| ||||| | |
|
|
| T |
5806782 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5806881 |
T |
|
| Q |
166 |
agagtagcctgcca-agaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttc |
264 |
Q |
| |
|
|||||||||||||| | ||| || | |||| || || | |||||||||||||||||||| |||| | ||| | |||||| | || | ||||||| ||| |
|
|
| T |
5806882 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5806981 |
T |
|
| Q |
265 |
ctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttgga |
317 |
Q |
| |
|
||||||| ||||| || ||||||| ||||| |||| |||||||||| |||||| |
|
|
| T |
5806982 |
ctaatcctctaattacaatatttgagattgttttttataacaccatttttgga |
5807034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 317
Target Start/End: Original strand, 5810317 - 5810569
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaa--gagggaaaggaagccaaaggctatcctaaagcaac-aaaacta |
165 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||||| |||||| || ||| |||||||||||||||||||||||| |||||| ||||| | |
|
|
| T |
5810317 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5810416 |
T |
|
| Q |
166 |
agagtagcctgcca-agaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttc |
264 |
Q |
| |
|
|||||||||||||| | ||| || | |||| || || | |||||||||||||||||||| |||| | ||| | |||||| | || | ||||||| ||| |
|
|
| T |
5810417 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5810516 |
T |
|
| Q |
265 |
ctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttgga |
317 |
Q |
| |
|
||||||| ||||| || ||||||| ||||| |||| |||||||||| |||||| |
|
|
| T |
5810517 |
ctaatcctctaattacaatatttgagattgttttttataacaccatttttgga |
5810569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 317
Target Start/End: Original strand, 5813852 - 5814104
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaa--gagggaaaggaagccaaaggctatcctaaagcaac-aaaacta |
165 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||||| |||||| || ||| |||||||||||||||||||||||| |||||| ||||| | |
|
|
| T |
5813852 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5813951 |
T |
|
| Q |
166 |
agagtagcctgcca-agaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttc |
264 |
Q |
| |
|
|||||||||||||| | ||| || | |||| || || | |||||||||||||||||||| |||| | ||| | |||||| | || | ||||||| ||| |
|
|
| T |
5813952 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5814051 |
T |
|
| Q |
265 |
ctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttgga |
317 |
Q |
| |
|
||||||| ||||| || ||||||| ||||| |||| |||||||||| |||||| |
|
|
| T |
5814052 |
ctaatcctctaattacaatatttgagattgttttttataacaccatttttgga |
5814104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 317
Target Start/End: Original strand, 5817387 - 5817639
Alignment:
| Q |
69 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaa--gagggaaaggaagccaaaggctatcctaaagcaac-aaaacta |
165 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||||| |||||| || ||| |||||||||||||||||||||||| |||||| ||||| | |
|
|
| T |
5817387 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5817486 |
T |
|
| Q |
166 |
agagtagcctgcca-agaaagcatatggctgcacatgttcctaaagaattctaatcagatatagtatctgtaaagcaaaaaagatgaatatcaaaatttc |
264 |
Q |
| |
|
|||||||||||||| | ||| || | |||| || || | |||||||||||||||||||| |||| | ||| | |||||| | || | ||||||| ||| |
|
|
| T |
5817487 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5817586 |
T |
|
| Q |
265 |
ctaatccgctaatcaccatatttgggattgcttttgataacaccatgtttgga |
317 |
Q |
| |
|
||||||| ||||| || ||||||| ||||| |||| |||||||||| |||||| |
|
|
| T |
5817587 |
ctaatcctctaattacaatatttgagattgttttttataacaccatttttgga |
5817639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 68 - 162
Target Start/End: Original strand, 36863585 - 36863681
Alignment:
| Q |
68 |
taaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttaca--aaagagggaaaggaagccaaaggctatcctaaagcaacaaaa |
162 |
Q |
| |
|
|||||||||| ||||| ||||||||||| |||||||||||||| | ||| || |||||| ||||||||||||||| |||||||| |||||||||| |
|
|
| T |
36863585 |
taaagcaatggaaataaaatgcaaaccaaaattaaggcctgaacatgtttgcataaaagagagaaaggaagccaaagactatcctatagcaacaaaa |
36863681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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