View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7504_low_40 (Length: 340)

Name: NF7504_low_40
Description: NF7504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7504_low_40
NF7504_low_40
[»] chr7 (38 HSPs)
chr7 (174-310)||(7482225-7482361)
chr7 (180-310)||(38441460-38441590)
chr7 (174-310)||(7240749-7240885)
chr7 (179-310)||(1738446-1738577)
chr7 (180-310)||(46840860-46840990)
chr7 (180-312)||(23314139-23314271)
chr7 (171-310)||(94309-94448)
chr7 (179-310)||(9268756-9268887)
chr7 (179-310)||(38063912-38064043)
chr7 (180-310)||(31319399-31319529)
chr7 (173-310)||(28536744-28536881)
chr7 (180-304)||(22285705-22285829)
chr7 (179-310)||(1565728-1565859)
chr7 (179-310)||(36583395-36583526)
chr7 (177-310)||(4790248-4790381)
chr7 (190-304)||(36016206-36016320)
chr7 (186-288)||(33418398-33418500)
chr7 (187-310)||(40840126-40840249)
chr7 (180-300)||(9575419-9575539)
chr7 (187-314)||(7269412-7269539)
chr7 (179-239)||(7661147-7661207)
chr7 (174-226)||(7482219-7482271)
chr7 (179-226)||(1565813-1565860)
chr7 (179-226)||(1738531-1738578)
chr7 (179-226)||(7240748-7240795)
chr7 (179-226)||(22285698-22285745)
chr7 (179-226)||(28536835-28536882)
chr7 (187-238)||(29993251-29993302)
chr7 (179-226)||(38063997-38064044)
chr7 (179-226)||(46840859-46840906)
chr7 (180-226)||(23314223-23314269)
chr7 (180-226)||(31319483-31319529)
chr7 (180-226)||(36016280-36016326)
chr7 (180-226)||(36583395-36583441)
chr7 (180-237)||(7269478-7269535)
chr7 (214-279)||(14706727-14706792)
chr7 (186-226)||(94402-94442)
chr7 (187-235)||(46877665-46877713)
[»] chr6 (37 HSPs)
chr6 (179-314)||(6330111-6330246)
chr6 (179-310)||(11572144-11572275)
chr6 (179-310)||(26602323-26602454)
chr6 (180-310)||(2830335-2830465)
chr6 (180-310)||(8382969-8383099)
chr6 (179-310)||(8099530-8099661)
chr6 (179-310)||(13853592-13853723)
chr6 (179-310)||(35031000-35031131)
chr6 (179-310)||(9644696-9644827)
chr6 (179-310)||(9650713-9650844)
chr6 (187-310)||(33052801-33052924)
chr6 (179-310)||(6068566-6068697)
chr6 (170-310)||(6143554-6143694)
chr6 (180-300)||(8417793-8417913)
chr6 (191-294)||(28747145-28747248)
chr6 (218-310)||(13043758-13043850)
chr6 (180-280)||(17992018-17992118)
chr6 (179-304)||(22896477-22896593)
chr6 (192-295)||(7596989-7597092)
chr6 (214-302)||(6068974-6069062)
chr6 (179-251)||(3788096-3788168)
chr6 (214-310)||(4251309-4251405)
chr6 (195-288)||(6549905-6549997)
chr6 (214-300)||(14936491-14936577)
chr6 (188-236)||(8186441-8186489)
chr6 (179-226)||(2830334-2830381)
chr6 (179-226)||(8099529-8099576)
chr6 (179-226)||(8383053-8383100)
chr6 (179-226)||(11572229-11572276)
chr6 (179-226)||(33052878-33052925)
chr6 (180-226)||(6330115-6330161)
chr6 (180-226)||(26602323-26602369)
chr6 (185-234)||(14936533-14936582)
chr6 (178-226)||(6143552-6143600)
chr6 (174-226)||(13853677-13853729)
chr6 (186-234)||(31849586-31849634)
chr6 (199-247)||(33393165-33393213)
[»] chr1 (46 HSPs)
chr1 (179-310)||(14984837-14984968)
chr1 (180-313)||(39401966-39402099)
chr1 (180-310)||(27159358-27159488)
chr1 (180-310)||(31842795-31842925)
chr1 (180-310)||(44668093-44668223)
chr1 (185-310)||(9981647-9981772)
chr1 (179-310)||(47216698-47216829)
chr1 (180-310)||(11795933-11796063)
chr1 (180-310)||(26471065-26471195)
chr1 (179-310)||(1050888-1051019)
chr1 (179-310)||(34042696-34042827)
chr1 (180-302)||(47777481-47777603)
chr1 (186-310)||(44955212-44955336)
chr1 (179-310)||(12483627-12483758)
chr1 (179-298)||(25694331-25694450)
chr1 (204-310)||(23278025-23278131)
chr1 (195-310)||(47588352-47588467)
chr1 (179-304)||(11897060-11897185)
chr1 (174-310)||(47969694-47969831)
chr1 (179-300)||(17556762-17556884)
chr1 (186-304)||(16448114-16448232)
chr1 (179-304)||(37552147-37552272)
chr1 (172-236)||(11897046-11897110)
chr1 (180-295)||(11989796-11989911)
chr1 (190-304)||(12213484-12213598)
chr1 (179-236)||(16448182-16448239)
chr1 (218-287)||(11774536-11774605)
chr1 (179-226)||(9981646-9981693)
chr1 (179-226)||(11795932-11795979)
chr1 (187-298)||(12043616-12043726)
chr1 (179-226)||(12483712-12483759)
chr1 (179-226)||(26471149-26471196)
chr1 (179-226)||(27159442-27159489)
chr1 (179-226)||(44668177-44668224)
chr1 (195-261)||(571556-571622)
chr1 (180-226)||(1050888-1050934)
chr1 (187-261)||(1598389-1598461)
chr1 (180-226)||(31842879-31842925)
chr1 (256-302)||(37552217-37552263)
chr1 (180-226)||(39402050-39402096)
chr1 (180-226)||(47216783-47216829)
chr1 (179-224)||(34042695-34042740)
chr1 (256-304)||(11897130-11897178)
chr1 (186-226)||(14984843-14984883)
chr1 (180-224)||(23278087-23278131)
chr1 (264-304)||(44955212-44955252)
[»] chr5 (34 HSPs)
chr5 (172-310)||(9395350-9395488)
chr5 (172-310)||(36563530-36563668)
chr5 (173-304)||(13103030-13103161)
chr5 (179-310)||(17025624-17025755)
chr5 (179-310)||(41989406-41989537)
chr5 (180-310)||(23359942-23360072)
chr5 (180-310)||(37148955-37149085)
chr5 (179-310)||(11795168-11795299)
chr5 (173-304)||(13033057-13033188)
chr5 (180-310)||(20848074-20848203)
chr5 (179-310)||(37641953-37642085)
chr5 (205-310)||(582989-583094)
chr5 (179-304)||(26350349-26350474)
chr5 (172-288)||(6126846-6126962)
chr5 (179-286)||(21575970-21576077)
chr5 (185-301)||(4443969-4444085)
chr5 (232-304)||(38361743-38361815)
chr5 (185-301)||(966157-966273)
chr5 (222-303)||(13539909-13539986)
chr5 (194-286)||(2366352-2366444)
chr5 (192-247)||(9006894-9006949)
chr5 (179-226)||(13033050-13033097)
chr5 (179-226)||(13103023-13103070)
chr5 (239-312)||(27080999-27081072)
chr5 (173-226)||(37149039-37149092)
chr5 (266-314)||(11574166-11574214)
chr5 (179-226)||(4443959-4444006)
chr5 (188-251)||(36595782-36595845)
chr5 (186-296)||(3549553-3549663)
chr5 (180-226)||(9395350-9395396)
chr5 (176-226)||(23359938-23359988)
chr5 (211-272)||(40138821-40138882)
chr5 (174-226)||(582983-583035)
chr5 (216-304)||(39290781-39290868)
[»] chr3 (54 HSPs)
chr3 (180-310)||(48340397-48340527)
chr3 (179-315)||(10297974-10298110)
chr3 (179-310)||(40690995-40691126)
chr3 (179-310)||(49823380-49823511)
chr3 (180-310)||(2787832-2787962)
chr3 (176-310)||(4238594-4238728)
chr3 (180-310)||(19557052-19557182)
chr3 (180-310)||(44785396-44785526)
chr3 (185-310)||(9111499-9111624)
chr3 (179-304)||(17653718-17653843)
chr3 (179-304)||(37508927-37509052)
chr3 (187-310)||(22721931-22722054)
chr3 (180-310)||(34080030-34080160)
chr3 (179-310)||(8437425-8437556)
chr3 (187-310)||(8817393-8817516)
chr3 (179-310)||(51406673-51406804)
chr3 (180-310)||(21295326-21295456)
chr3 (180-310)||(38964392-38964522)
chr3 (185-310)||(42507360-42507485)
chr3 (179-304)||(46208036-46208161)
chr3 (190-310)||(42170356-42170476)
chr3 (186-304)||(36095686-36095804)
chr3 (180-304)||(6013336-6013460)
chr3 (180-301)||(35513482-35513603)
chr3 (192-303)||(33942944-33943055)
chr3 (180-302)||(5323214-5323337)
chr3 (180-245)||(34988140-34988205)
chr3 (179-235)||(9027141-9027197)
chr3 (180-304)||(9213522-9213646)
chr3 (215-279)||(49687902-49687966)
chr3 (210-295)||(29285790-29285873)
chr3 (173-226)||(4238587-4238640)
chr3 (169-226)||(17653701-17653758)
chr3 (180-236)||(2131746-2131802)
chr3 (179-226)||(19557136-19557183)
chr3 (179-226)||(21295410-21295457)
chr3 (179-226)||(22721930-22721977)
chr3 (255-310)||(33128206-33128261)
chr3 (179-226)||(34080114-34080161)
chr3 (179-226)||(44785480-44785527)
chr3 (179-226)||(46208029-46208076)
chr3 (179-226)||(49823465-49823512)
chr3 (172-226)||(2787916-2787970)
chr3 (180-226)||(10297979-10298025)
chr3 (180-226)||(37508921-37508967)
chr3 (214-303)||(8092595-8092684)
chr3 (179-236)||(9213515-9213572)
chr3 (187-296)||(26019487-26019595)
chr3 (179-236)||(34988074-34988131)
chr3 (227-271)||(8951943-8951987)
chr3 (264-304)||(21295332-21295372)
chr3 (174-226)||(38964386-38964438)
chr3 (179-239)||(45652068-45652128)
chr3 (264-304)||(46208114-46208154)
[»] chr2 (41 HSPs)
chr2 (179-311)||(37666609-37666741)
chr2 (179-310)||(3055558-3055689)
chr2 (179-310)||(37990012-37990143)
chr2 (179-310)||(41478638-41478769)
chr2 (179-310)||(44398686-44398817)
chr2 (180-310)||(13197710-13197840)
chr2 (180-310)||(15896842-15896972)
chr2 (180-310)||(16044317-16044447)
chr2 (173-310)||(16243776-16243913)
chr2 (179-310)||(9047754-9047885)
chr2 (179-310)||(44397547-44397678)
chr2 (174-310)||(6648513-6648649)
chr2 (179-310)||(38917521-38917652)
chr2 (180-304)||(15372232-15372356)
chr2 (179-310)||(13344484-13344615)
chr2 (180-310)||(12337937-12338067)
chr2 (179-299)||(41492895-41493015)
chr2 (179-304)||(30099181-30099306)
chr2 (199-310)||(4683951-4684062)
chr2 (174-304)||(12170393-12170523)
chr2 (185-282)||(44804583-44804680)
chr2 (185-288)||(16734805-16734908)
chr2 (189-310)||(31150653-31150769)
chr2 (220-279)||(41453090-41453149)
chr2 (173-226)||(15896835-15896888)
chr2 (174-234)||(23227348-23227408)
chr2 (179-226)||(3055557-3055604)
chr2 (179-226)||(4684016-4684063)
chr2 (253-304)||(13724108-13724159)
chr2 (179-226)||(37990097-37990144)
chr2 (179-226)||(41478723-41478770)
chr2 (179-226)||(44397546-44397593)
chr2 (179-226)||(44398685-44398732)
chr2 (180-226)||(13197794-13197840)
chr2 (180-226)||(16044401-16044447)
chr2 (215-305)||(36688887-36688977)
chr2 (180-226)||(37666694-37666740)
chr2 (180-245)||(13724102-13724167)
chr2 (173-226)||(15372219-15372272)
chr2 (211-304)||(30852648-30852741)
chr2 (264-304)||(41492902-41492942)
[»] chr8 (51 HSPs)
chr8 (179-310)||(54611-54742)
chr8 (179-310)||(2890161-2890292)
chr8 (179-310)||(7785777-7785908)
chr8 (180-310)||(6552655-6552785)
chr8 (180-304)||(31654619-31654743)
chr8 (178-310)||(43199352-43199484)
chr8 (179-310)||(7805698-7805829)
chr8 (179-310)||(39571202-39571333)
chr8 (179-310)||(44498186-44498317)
chr8 (180-310)||(3304278-3304408)
chr8 (186-310)||(12343146-12343270)
chr8 (179-310)||(7012171-7012302)
chr8 (179-310)||(12763653-12763784)
chr8 (179-310)||(25600999-25601130)
chr8 (179-310)||(32114474-32114605)
chr8 (179-310)||(32211362-32211493)
chr8 (180-310)||(33289261-33289391)
chr8 (179-310)||(15888351-15888482)
chr8 (172-310)||(13578857-13578995)
chr8 (179-304)||(8587176-8587301)
chr8 (179-304)||(28463617-28463742)
chr8 (187-298)||(24691986-24692096)
chr8 (173-261)||(27422239-27422327)
chr8 (248-310)||(4245649-4245711)
chr8 (195-304)||(17006917-17007026)
chr8 (195-304)||(17570221-17570330)
chr8 (185-234)||(28463616-28463665)
chr8 (180-234)||(8587170-8587224)
chr8 (173-226)||(54696-54749)
chr8 (173-226)||(43199438-43199491)
chr8 (188-236)||(15688038-15688086)
chr8 (179-226)||(2890246-2890293)
chr8 (179-226)||(4245665-4245712)
chr8 (179-226)||(7785862-7785909)
chr8 (179-226)||(7805783-7805830)
chr8 (185-236)||(17006916-17006967)
chr8 (185-236)||(17570280-17570331)
chr8 (196-247)||(35564706-35564757)
chr8 (180-226)||(3304362-3304408)
chr8 (180-226)||(6552655-6552701)
chr8 (180-226)||(12343224-12343270)
chr8 (180-226)||(15888436-15888482)
chr8 (180-226)||(31654613-31654659)
chr8 (180-226)||(32114559-32114605)
chr8 (187-249)||(33057655-33057717)
chr8 (180-226)||(44498271-44498317)
chr8 (256-301)||(27422266-27422311)
chr8 (179-224)||(32211449-32211494)
chr8 (178-226)||(12763738-12763786)
chr8 (256-304)||(25601006-25601054)
chr8 (185-233)||(30171487-30171535)
[»] chr4 (51 HSPs)
chr4 (180-310)||(47833611-47833741)
chr4 (173-310)||(48336263-48336400)
chr4 (179-310)||(53337370-53337501)
chr4 (180-310)||(3372121-3372251)
chr4 (180-310)||(6121893-6122023)
chr4 (180-310)||(7579310-7579440)
chr4 (180-310)||(20538686-20538816)
chr4 (180-304)||(43900555-43900679)
chr4 (179-310)||(3992976-3993107)
chr4 (179-310)||(24704370-24704501)
chr4 (180-311)||(46797724-46797855)
chr4 (179-310)||(52756675-52756806)
chr4 (180-310)||(42797732-42797862)
chr4 (174-310)||(47838611-47838747)
chr4 (179-298)||(3422073-3422191)
chr4 (179-310)||(3904682-3904813)
chr4 (179-301)||(33621805-33621927)
chr4 (180-310)||(51894582-51894712)
chr4 (179-301)||(41469765-41469887)
chr4 (186-310)||(5986876-5987000)
chr4 (185-304)||(40913194-40913313)
chr4 (199-310)||(33551201-33551312)
chr4 (199-310)||(26231577-26231688)
chr4 (187-298)||(41615683-41615794)
chr4 (195-304)||(17344219-17344328)
chr4 (180-299)||(29845656-29845769)
chr4 (177-262)||(45478140-45478225)
chr4 (180-295)||(50430418-50430533)
chr4 (211-300)||(25855093-25855182)
chr4 (180-247)||(4780358-4780425)
chr4 (186-234)||(17236864-17236912)
chr4 (256-313)||(4780371-4780428)
chr4 (238-310)||(17236845-17236918)
chr4 (174-226)||(47833605-47833657)
chr4 (179-226)||(3372120-3372167)
chr4 (179-226)||(3992975-3993022)
chr4 (179-226)||(33551200-33551247)
chr4 (179-226)||(43900548-43900595)
chr4 (179-226)||(48336262-48336309)
chr4 (180-226)||(20538770-20538816)
chr4 (180-226)||(24704370-24704416)
chr4 (179-225)||(26231576-26231622)
chr4 (180-226)||(53337370-53337416)
chr4 (192-304)||(1716307-1716417)
chr4 (214-295)||(31013036-31013117)
chr4 (169-226)||(42797721-42797778)
chr4 (180-236)||(1716301-1716357)
chr4 (254-310)||(5986950-5987006)
chr4 (180-236)||(23226077-23226133)
chr4 (264-304)||(42797816-42797856)
chr4 (180-236)||(44900080-44900136)
[»] scaffold0204 (2 HSPs)
scaffold0204 (173-310)||(23785-23922)
scaffold0204 (179-226)||(23784-23831)
[»] scaffold0482 (2 HSPs)
scaffold0482 (179-310)||(12860-12991)
scaffold0482 (179-226)||(12859-12906)
[»] scaffold0464 (2 HSPs)
scaffold0464 (174-312)||(6125-6263)
scaffold0464 (180-226)||(6215-6261)
[»] scaffold0009 (2 HSPs)
scaffold0009 (180-310)||(49505-49635)
scaffold0009 (179-226)||(49504-49551)
[»] scaffold1707 (1 HSPs)
scaffold1707 (192-303)||(1342-1453)
[»] scaffold0011 (1 HSPs)
scaffold0011 (179-304)||(231302-231427)
[»] scaffold0415 (1 HSPs)
scaffold0415 (180-299)||(13731-13845)
[»] scaffold0003 (1 HSPs)
scaffold0003 (183-281)||(312747-312845)
[»] scaffold0650 (1 HSPs)
scaffold0650 (215-272)||(20-77)
[»] scaffold0017 (1 HSPs)
scaffold0017 (215-295)||(30042-30122)


Alignment Details
Target: chr7 (Bit Score: 113; Significance: 3e-57; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 174 - 310
Target Start/End: Complemental strand, 7482361 - 7482225
Alignment:
Q  174 aaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttt 273  Q
    |||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  7482361 aaataatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttg 7482262  T
Q  274 acctaaatttctcttgtaaataggaccggagatagta 310  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  7482261 acctaaatttctcttataaataggaccggaggtagta 7482225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 180 - 310
Target Start/End: Complemental strand, 38441590 - 38441460
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||    
T  38441590 tacttcctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacataa 38441491  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  38441490 atttctcttataaataggaccggaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 174 - 310
Target Start/End: Complemental strand, 7240885 - 7240749
Alignment:
Q  174 aaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttt 273  Q
    |||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  7240885 aaataatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttg 7240786  T
Q  274 acctaaatttctcttgtaaataggaccggagatagta 310  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  7240785 acctaaatttctcttataaataggaccggaggtagta 7240749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 1738446 - 1738577
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  1738446 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 1738545  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  1738546 aatttctcttataaataggaccggaggtagta 1738577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 310
Target Start/End: Complemental strand, 46840990 - 46840860
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  46840990 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 46840891  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  46840890 atttctcttataaataggaccggaggtagta 46840860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 180 - 312
Target Start/End: Original strand, 23314139 - 23314271
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  23314139 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 23314238  T
Q  280 atttctcttgtaaataggaccggagatagtagt 312  Q
    ||||||||| ||||||||||||||| |||||||    
T  23314239 atttctcttataaataggaccggaggtagtagt 23314271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 171 - 310
Target Start/End: Original strand, 94309 - 94448
Alignment:
Q  171 gttaaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttg 270  Q
    |||||||  |||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  94309 gttaaattgtactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttg 94408  T
Q  271 tttacctaaatttctcttgtaaataggaccggagatagta 310  Q
    || ||||||||||||||| |||||||||||||||||||||    
T  94409 ttgacctaaatttctcttataaataggaccggagatagta 94448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 9268887 - 9268756
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  9268887 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 9268788  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||| ||| |||||    
T  9268787 aatttctcttataaataggaccagaggtagta 9268756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 38063912 - 38064043
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  38063912 atactccctctggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 38064011  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  38064012 aatttctcttataaataggaccggaggtagta 38064043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 31319399 - 31319529
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  31319399 tactccctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 31319498  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  31319499 atttctcttataaataggaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 173 - 310
Target Start/End: Original strand, 28536744 - 28536881
Alignment:
Q  173 taaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtt 272  Q
    ||||||||||| |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  28536744 taaatgatactccctccggtcctatttataagagaattttggatcaataaaagttgatgtatctagttaaaaattcattccaaatacattcacttttgtt 28536843  T
Q  273 tacctaaatttctcttgtaaataggaccggagatagta 310  Q
     ||||||||||||||| ||||||||||||||| |||||    
T  28536844 gacctaaatttctcttataaataggaccggaggtagta 28536881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 180 - 304
Target Start/End: Complemental strand, 22285829 - 22285705
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||    
T  22285829 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaa 22285730  T
Q  280 atttctcttgtaaataggaccggag 304  Q
    ||||||||| |||||||||||||||    
T  22285729 atttctcttataaataggaccggag 22285705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 1565728 - 1565859
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| ||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  1565728 atactcccttcggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 1565827  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  1565828 aatttctcttataaataggaccggaggtagta 1565859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 36583526 - 36583395
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||    
T  36583526 atactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgaccta 36583427  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  36583426 aatttctcttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 177 - 310
Target Start/End: Complemental strand, 4790381 - 4790248
Alignment:
Q  177 tgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacc 276  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||| ||||||| |||    
T  4790381 tgatacttcctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgacc 4790282  T
Q  277 taaatttctcttgtaaataggaccggagatagta 310  Q
    ||||||| |||| ||||||||||||||| |||||    
T  4790281 taaatttttcttataaataggaccggaggtagta 4790248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 190 - 304
Target Start/End: Original strand, 36016206 - 36016320
Alignment:
Q  190 ggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttg 289  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||     
T  36016206 ggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctta 36016305  T
Q  290 taaataggaccggag 304  Q
    |||||||||||||||    
T  36016306 taaataggaccggag 36016320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 186 - 288
Target Start/End: Complemental strand, 33418500 - 33418398
Alignment:
Q  186 ctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttct 285  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||    
T  33418500 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 33418401  T
Q  286 ctt 288  Q
    |||    
T  33418400 ctt 33418398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 187 - 310
Target Start/End: Original strand, 40840126 - 40840249
Alignment:
Q  187 tccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctc 286  Q
    |||||||||||||||| ||||| |||  |||||||||||||||||||  |||||||||||||||| |||||||||| | ||||||| || ||| ||||||    
T  40840126 tccggtcctatttataagagaaatttttgtcaacaaaagttgatgtacttagttaaaaattcagtccaaatacattgatttttgttaacttaactttctc 40840225  T
Q  287 ttgtaaataggaccggagatagta 310  Q
    || |||||||||||||||| ||||    
T  40840226 ttctaaataggaccggagagagta 40840249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 180 - 300
Target Start/End: Complemental strand, 9575539 - 9575419
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| ||| |||||||||||||| |||||  || ||||||||||| ||||||||||||||||||||||||||  |||||| || ||||||||| ||| ||    
T  9575539 tactcccttcggtcctatttataagagaaagtttggtcaacaaaacttgatgtatctagttaaaaattcagtctaaatacgttaacttttgttgacccaa 9575440  T
Q  280 atttctcttgtaaataggacc 300  Q
     ||||||||  ||||||||||    
T  9575439 ctttctcttacaaataggacc 9575419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 187 - 314
Target Start/End: Original strand, 7269412 - 7269539
Alignment:
Q  187 tccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctc 286  Q
    |||||||||||||||| |||||  |||||| |||||||||||||| |||| ||||||||||||||| | ||||||  | ||||||| ||| || ||| ||    
T  7269412 tccggtcctatttataagagaaagttgggttaacaaaagttgatgcatctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttc 7269511  T
Q  287 ttgtaaataggaccggagatagtagtaa 314  Q
    || |||||| ||||||||  ||||||||    
T  7269512 ttataaataagaccggagggagtagtaa 7269539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 7661207 - 7661147
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagt 239  Q
    ||||| |||| ||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  7661207 atactccctctggtcctatttatatgagacatttgggtcaacaaaagttgatgtatctagt 7661147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 7482219 - 7482271
Alignment:
Q  174 aaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  7482219 aaattatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 7482271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 1565860 - 1565813
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  1565860 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 1565813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 1738578 - 1738531
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  1738578 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 1738531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 7240748 - 7240795
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  7240748 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 7240795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 22285698 - 22285745
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  22285698 atactccctccggtcctatttataagagaaatttaggtcaacaaaagt 22285745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 28536882 - 28536835
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  28536882 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 28536835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 29993251 - 29993302
Alignment:
Q  187 tccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctag 238  Q
    ||||||||||||| || |||||| ||||||||||||||||| || |||||||    
T  29993251 tccggtcctatttgtaagagaatgttgggtcaacaaaagttaatatatctag 29993302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 38064044 - 38063997
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  38064044 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 38063997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 46840859 - 46840906
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  46840859 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 46840906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 23314269 - 23314223
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  23314269 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 23314223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 31319529 - 31319483
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  31319529 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 31319483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 36016326 - 36016280
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  36016326 tactccctccggtcctatttataagagaaatttaggtcaacaaaagt 36016280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 36583395 - 36583441
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  36583395 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 36583441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 7269535 - 7269478
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatcta 237  Q
    |||| ||||||||| |||||||| || ||  |||||||||||||| ||||||||||||    
T  7269535 tactccctccggtcttatttataagaaaaagttgggtcaacaaaaattgatgtatcta 7269478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 279
Target Start/End: Complemental strand, 14706792 - 14706727
Alignment:
Q  214 ggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    ||||||||||||||||| |||||  |||| |||||| |||| ||||||  ||||||||| ||||||    
T  14706792 ggtcaacaaaagttgatatatctgattaacaattcaattcagatacatcaacttttgttaacctaa 14706727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 94442 - 94402
Alignment:
Q  186 ctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||||||||||||||| ||||| ||| |||||||||||||    
T  94442 ctccggtcctatttataagagaaatttaggtcaacaaaagt 94402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 46877713 - 46877665
Alignment:
Q  187 tccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatc 235  Q
    ||||||||||| |||| |||||  ||||||||||||||||| |||||||    
T  46877713 tccggtcctatatataagagaaagttgggtcaacaaaagttaatgtatc 46877665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 1e-56; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 179 - 314
Target Start/End: Complemental strand, 6330246 - 6330111
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  6330246 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 6330147  T
Q  279 aatttctcttgtaaataggaccggagatagtagtaa 314  Q
    |||||||||| ||||||||||||||| |||||||||    
T  6330146 aatttctcttataaataggaccggaggtagtagtaa 6330111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 11572144 - 11572275
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  11572144 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 11572243  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  11572244 aatttctcttataaataggaccggaggtagta 11572275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 26602454 - 26602323
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  26602454 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 26602355  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  26602354 aatttctcttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 310
Target Start/End: Complemental strand, 2830465 - 2830335
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  2830465 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 2830366  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  2830365 atttctcttataaataggaccggaggtagta 2830335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 8382969 - 8383099
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  8382969 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 8383068  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  8383069 atttctcttataaataggaccggaggtagta 8383099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 8099661 - 8099530
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||    
T  8099661 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgaccta 8099562  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  8099561 aatttctcttataaataggaccggaggtagta 8099530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 13853592 - 13853723
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  13853592 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 13853691  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| |||||||||||| || |||||    
T  13853692 aatttctcttataaataggaccgaaggtagta 13853723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 35031000 - 35031131
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  35031000 atacttcctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 35031099  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    ||||| |||| ||||||||||||||| |||||    
T  35031100 aatttttcttataaataggaccggaggtagta 35031131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 9644827 - 9644696
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||| |||||    
T  9644827 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgaccta 9644728  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  9644727 aatttctcttataaataggaccggaggtagta 9644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 9650844 - 9650713
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||| |||||    
T  9650844 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgaccta 9650745  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  9650744 aatttctcttataaataggaccggaggtagta 9650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 187 - 310
Target Start/End: Original strand, 33052801 - 33052924
Alignment:
Q  187 tccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctc 286  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  33052801 tccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 33052900  T
Q  287 ttgtaaataggaccggagatagta 310  Q
    || ||||||||||||||| |||||    
T  33052901 ttataaataggaccggaggtagta 33052924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 6068697 - 6068566
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| || |||||    
T  6068697 atactccctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgaccta 6068598  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    ||||| |||| ||||||||||||||| |||||    
T  6068597 aatttttcttataaataggaccggaggtagta 6068566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 170 - 310
Target Start/End: Complemental strand, 6143694 - 6143554
Alignment:
Q  170 agttaaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcactttt 269  Q
    ||||||||  |||| | |||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  6143694 agttaaatactactccttccggttctatttataagagaattttgggacaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcactttt 6143595  T
Q  270 gtttacctaaatttctcttgtaaataggaccggagatagta 310  Q
    ||| ||||||||||||||| ||||||||| ||||| |||||    
T  6143594 gttgacctaaatttctcttataaataggatcggaggtagta 6143554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 8417793 - 8417913
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||    
T  8417793 tactcccttcggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaa 8417892  T
Q  280 atttctcttgtaaataggacc 300  Q
    ||||||||| |||||| ||||    
T  8417893 atttctcttataaataagacc 8417913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 191 - 294
Target Start/End: Original strand, 28747145 - 28747248
Alignment:
Q  191 gtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgt 290  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| | ||||||||||||| |    
T  28747145 gtcctatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttat 28747244  T
Q  291 aaat 294  Q
    ||||    
T  28747245 aaat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 218 - 310
Target Start/End: Complemental strand, 13043850 - 13043758
Alignment:
Q  218 aacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||| |||||    
T  13043850 aacaaaagttgatgtatctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13043758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 180 - 280
Target Start/End: Complemental strand, 17992118 - 17992018
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| ||| |||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||| | ||||||||||||||||| || ||||||    
T  17992118 tactcccttcggtcctatttataagagaattttgggtcaacaaaaatcgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaa 17992019  T
Q  280 a 280  Q
    |    
T  17992018 a 17992018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 179 - 304
Target Start/End: Complemental strand, 22896593 - 22896477
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| || ||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||| |||||||         |||| |||||    
T  22896593 atactcccgccggtcctatttataagagaattttttgtcaacaaaagttgatgtatctagttaaaaattcagtccaaatac---------tgttgaccta 22896503  T
Q  279 aatttctcttgtaaataggaccggag 304  Q
    || ||||||| |||||||||||||||    
T  22896502 aacttctcttataaataggaccggag 22896477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 7596989 - 7597092
Alignment:
Q  192 tcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgta 291  Q
    ||||||||||| ||||| |||| ||||| |||||||||||||| ||||||||||||||||||  ||||||  ||||||||| ||  || |||||||| ||    
T  7596989 tcctatttataggagaaatttgagtcaataaaagttgatgtatttagttaaaaattcagttcggatacatcaacttttgttaacacaactttctcttata 7597088  T
Q  292 aata 295  Q
    ||||    
T  7597089 aata 7597092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 6068974 - 6069062
Alignment:
Q  214 ggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaataggaccgg 302  Q
    |||||||||||| ||| ||||| ||||||||||| ||  |||||||||| ||||||||| |||||||| ||| || |||||||||||||    
T  6068974 ggtcaacaaaagatgaagtatcgagttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaataggaccgg 6069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 3788168 - 3788096
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagt 251  Q
    ||||| ||||||||| |||||||| || || ||| ||||||||||||||||||||| ||||||| ||||||||    
T  3788168 atactccctccggtcttatttataagataaatttaggtcaacaaaagttgatgtatttagttaacaattcagt 3788096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 310
Target Start/End: Complemental strand, 4251405 - 4251309
Alignment:
Q  214 ggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaataggaccggagatagta 310  Q
    |||||| ||||  |||||||||||||||| ||||  | |||| ||| || ||||||||| ||  ||||||||||||||||||||| || ||||||||    
T  4251405 ggtcaataaaatgtgatgtatctagttaagaatttggatcaagtacgttaacttttgttgactcaaatttctcttgtaaataggatcgaagatagta 4251309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 288
Target Start/End: Complemental strand, 6549997 - 6549905
Alignment:
Q  195 tatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaatt-cagttcaaatacattcacttttgtttacctaaatttctctt 288  Q
    |||||||| ||||  ||| ||| ||||||||||||||||||||||  ||| || ||  ||||||||||| ||||||||| |||||||||||||||    
T  6549997 tatttataagagatattttggttaacaaaagttgatgtatctagtccaaattttca--tcaaatacattaacttttgttgacctaaatttctctt 6549905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 300
Target Start/End: Original strand, 14936491 - 14936577
Alignment:
Q  214 ggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaataggacc 300  Q
    |||||||||||| |||||||||||||||| ||||   | |||||||||  ||| ||||| ||| |||| |||||| |||||||||||    
T  14936491 ggtcaacaaaaggtgatgtatctagttaagaatttgttccaaatacatcaactattgttgacccaaatatctcttataaataggacc 14936577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 8186489 - 8186441
Alignment:
Q  188 ccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatct 236  Q
    |||||||||||||||  |||| ||||| |||||||||||||||||||||    
T  8186489 ccggtcctatttataaaagaaatttggatcaacaaaagttgatgtatct 8186441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 2830334 - 2830381
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  2830334 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 2830381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 8099529 - 8099576
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  8099529 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 8099576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 8383100 - 8383053
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  8383100 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 8383053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 11572276 - 11572229
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  11572276 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 11572229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 33052925 - 33052878
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  33052925 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 33052878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 6330115 - 6330161
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  6330115 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 6330161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 26602323 - 26602369
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  26602323 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 26602369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 14936582 - 14936533
Alignment:
Q  185 cctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtat 234  Q
    |||| ||||||||||||| ||||  ||||||||||||| |||||||||||    
T  14936582 cctctggtcctatttataagagatatttgggtcaacaatagttgatgtat 14936533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 6143552 - 6143600
Alignment:
Q  178 gatacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||||| |||||| ||||||||||| ||||| ||| |||||||||||||    
T  6143552 gatactacctccgatcctatttataagagaaatttaggtcaacaaaagt 6143600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 13853729 - 13853677
Alignment:
Q  174 aaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| ||||| ||| |||||||||||||| ||||| ||| |||||||||||||    
T  13853729 aaataatactaccttcggtcctatttataagagaaatttaggtcaacaaaagt 13853677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 31849586 - 31849634
Alignment:
Q  186 ctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtat 234  Q
    |||||||| |||||||| ||||  | |||||||||||||||||||||||    
T  31849586 ctccggtcatatttataagagacatatgggtcaacaaaagttgatgtat 31849634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 33393165 - 33393213
Alignment:
Q  199 tatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaatt 247  Q
    |||| ||||| |||| ||||| |||||||||||||||||||| ||||||    
T  33393165 tataagagaaatttgagtcaataaaagttgatgtatctagtttaaaatt 33393213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 14984968 - 14984837
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  14984968 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 14984869  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| |||||||||||||||||||||    
T  14984868 aatttctcttataaataggaccggagatagta 14984837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 39401966 - 39402099
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  39401966 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 39402065  T
Q  280 atttctcttgtaaataggaccggagatagtagta 313  Q
    ||||||||| ||||||||||||||| ||||||||    
T  39402066 atttctcttataaataggaccggaggtagtagta 39402099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 27159358 - 27159488
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  27159358 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 27159457  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  27159458 atttctcttataaataggaccggaggtagta 27159488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 31842795 - 31842925
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  31842795 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 31842894  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  31842895 atttctcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 44668093 - 44668223
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  44668093 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 44668192  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  44668193 atttctcttataaataggaccggaggtagta 44668223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 185 - 310
Target Start/End: Complemental strand, 9981772 - 9981647
Alignment:
Q  185 cctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttc 284  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  9981772 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 9981673  T
Q  285 tcttgtaaataggaccggagatagta 310  Q
    |||| ||||||||||||||| |||||    
T  9981672 tcttataaataggaccggaggtagta 9981647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 47216698 - 47216829
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  47216698 atactccctccggtactatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 47216797  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  47216798 aatttctcttataaataggaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 180 - 310
Target Start/End: Complemental strand, 11796063 - 11795933
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||    
T  11796063 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaa 11795964  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  11795963 atttctcttataaataggaccggaggtagta 11795933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 26471065 - 26471195
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  26471065 tactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 26471164  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  26471165 atttctcttataaataggaccggaggtagta 26471195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 1051019 - 1050888
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||    
T  1051019 atactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgaccta 1050920  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  1050919 aatttctcttataaataggaccggaggtagta 1050888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 34042827 - 34042696
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  34042827 atactccctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgaccta 34042728  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  34042727 aatttctcttataaataggaccggaggtagta 34042696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 180 - 302
Target Start/End: Original strand, 47777481 - 47777603
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||    
T  47777481 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaa 47777580  T
Q  280 atttctcttgtaaataggaccgg 302  Q
    ||||||||| |||||||||||||    
T  47777581 atttctcttataaataggaccgg 47777603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 186 - 310
Target Start/End: Original strand, 44955212 - 44955336
Alignment:
Q  186 ctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttct 285  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |    
T  44955212 ctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaattttt 44955311  T
Q  286 cttgtaaataggaccggagatagta 310  Q
    ||| ||||||||||||||| |||||    
T  44955312 cttataaataggaccggaggtagta 44955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 12483627 - 12483758
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||  ||||||||||||||||||| |||||    
T  12483627 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgaccta 12483726  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  12483727 aatttctcttataaataggaccggaggtagta 12483758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 179 - 298
Target Start/End: Complemental strand, 25694450 - 25694331
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| || | |||    
T  25694450 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgatcta 25694351  T
Q  279 aatttctcttgtaaatagga 298  Q
    |||||||||| |||||||||    
T  25694350 aatttctcttataaatagga 25694331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 204 - 310
Target Start/End: Original strand, 23278025 - 23278131
Alignment:
Q  204 gagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaataggaccgga 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||||||||||||    
T  23278025 gagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccgga 23278124  T
Q  304 gatagta 310  Q
    | |||||    
T  23278125 ggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 195 - 310
Target Start/End: Original strand, 47588352 - 47588467
Alignment:
Q  195 tatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaat 294  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||    
T  47588352 tatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 47588451  T
Q  295 aggaccggagatagta 310  Q
    | |||| ||| |||||    
T  47588452 aagaccagaggtagta 47588467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 179 - 304
Target Start/End: Complemental strand, 11897185 - 11897060
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||| ||||||  ||||||||| |||||    
T  11897185 atactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgaccta 11897086  T
Q  279 aatttctcttgtaaataggaccggag 304  Q
    | |||||||| |||||||||||||||    
T  11897085 actttctcttataaataggaccggag 11897060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 174 - 310
Target Start/End: Complemental strand, 47969831 - 47969694
Alignment:
Q  174 aaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttt 273  Q
    |||| ||||| ||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||     
T  47969831 aaataatactccctccggtcctatttataaaataattttggatcaacaaaagttgatgtatctagttaaaaattcagtctaaatacatttacttttgttg 47969732  T
Q  274 acctaaatttctc-ttgtaaataggaccggagatagta 310  Q
    ||||||||||||| || |||||||||||||||| ||||    
T  47969731 acctaaatttctctttataaataggaccggagagagta 47969694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 179 - 300
Target Start/End: Complemental strand, 17556884 - 17556762
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaataca-ttcacttttgtttacct 277  Q
    ||||| |||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||| ||||    
T  17556884 atactccctccggtcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgacct 17556785  T
Q  278 aaatttctcttgtaaataggacc 300  Q
    || |||||||| |||||||||||    
T  17556784 aactttctcttataaataggacc 17556762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 186 - 304
Target Start/End: Original strand, 16448114 - 16448232
Alignment:
Q  186 ctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttct 285  Q
    |||||||| |||||||| | |||| ||||||||||||||||| |||||||| ||| |||||||||| || ||||||  ||||||||| ||| || |||||    
T  16448114 ctccggtcttatttataggggaatattgggtcaacaaaagtttatgtatctggttcaaaattcagtccagatacatcaacttttgttgacccaactttct 16448213  T
Q  286 cttgtaaataggaccggag 304  Q
    ||| |||||||||||||||    
T  16448214 cttataaataggaccggag 16448232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 304
Target Start/End: Complemental strand, 37552272 - 37552147
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| || ||||||||||||||| ||||| ||||||||||||||| |  |||||||| |||||||||||||| || ||||||  ||| ||||| ||  |    
T  37552272 atactccccccggtcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccagatacatgaactgttgttgactca 37552173  T
Q  279 aatttctcttgtaaataggaccggag 304  Q
    | ||| |||| |||||||||||||||    
T  37552172 actttatcttataaataggaccggag 37552147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 11897046 - 11897110
Alignment:
Q  172 ttaaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatct 236  Q
    |||||||||||| |||||||||||||||||| |||||  || |||||||||||||||||||||||    
T  11897046 ttaaatgatactccctccggtcctatttataagagaaagttaggtcaacaaaagttgatgtatct 11897110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 180 - 295
Target Start/End: Complemental strand, 11989911 - 11989796
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| ||||||||||||||||||  |||| |||| ||||| |||| ||||||||| | |||||||||||||| |||||| |||   ||||||| ||| ||    
T  11989911 tactccctccggtcctatttataaaagaaatttgagtcaataaaaattgatgtatttggttaaaaattcagtccaaatatattagtttttgttgacccaa 11989812  T
Q  280 atttctcttgtaaata 295  Q
     |||||||| ||||||    
T  11989811 ctttctcttataaata 11989796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 304
Target Start/End: Original strand, 12213484 - 12213598
Alignment:
Q  190 ggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttg 289  Q
    ||||||||||||  |||||  |||||||||||||| ||||| ||| |||||||||||||| |  ||||||||| | ||||||| ||||||  |||||||     
T  12213484 ggtcctatttattagagaaacttgggtcaacaaaaattgatttatttagttaaaaattcaatctaaatacattaatttttgttgacctaacattctctta 12213583  T
Q  290 taaataggaccggag 304  Q
    |||||| ||| ||||    
T  12213584 taaataagactggag 12213598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 16448239 - 16448182
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatct 236  Q
    ||||| |||||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  16448239 atactccctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatct 16448182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 11774605 - 11774536
Alignment:
Q  218 aacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctct 287  Q
    |||||||||||| |||||||||| ||||||||||| || |||||  | ||||||| |||||| |||||||    
T  11774605 aacaaaagttgacgtatctagttcaaaattcagtttaattacatcaatttttgttgacctaactttctct 11774536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 9981646 - 9981693
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  9981646 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 9981693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 11795932 - 11795979
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  11795932 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 11795979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 298
Target Start/End: Complemental strand, 12043726 - 12043616
Alignment:
Q  187 tccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctc 286  Q
    |||||||||||||||| || || |||   ||||||||| || |||||||| |||||||||| |  ||||||||||  ||||||||| || ||||| |||     
T  12043726 tccggtcctatttataagaaaaatttaaatcaacaaaaattaatgtatcttgttaaaaattga-atcaaatacatcaacttttgttgacttaaatatctt 12043628  T
Q  287 ttgtaaatagga 298  Q
    || |||||||||    
T  12043627 ttataaatagga 12043616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 12483759 - 12483712
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  12483759 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 12483712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 26471196 - 26471149
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  26471196 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 26471149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 27159489 - 27159442
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  27159489 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 27159442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 44668224 - 44668177
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  44668224 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 44668177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 571622 - 571556
Alignment:
Q  195 tatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacat 261  Q
    |||||||| |||||| || | |||||||||||| ||||| |||||| ||||||||||  ||||||||    
T  571622 tatttataggagaatatttgatcaacaaaagttaatgtacctagttcaaaattcagtctaaatacat 571556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 1050888 - 1050934
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  1050888 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 1050934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 261
Target Start/End: Original strand, 1598389 - 1598461
Alignment:
Q  187 tccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacat 261  Q
    |||| ||||||||||| ||||| | ||| ||||||||| ||||||||| | |||||||||||||| |||||||||    
T  1598389 tccgatcctatttataagagaaatatgg-tcaacaaaaattgatgtatat-gttaaaaattcagtccaaatacat 1598461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 31842925 - 31842879
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  31842925 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 31842879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 37552217 - 37552263
Alignment:
Q  256 atacattcacttttgtttacctaaatttctcttgtaaataggaccgg 302  Q
    ||||||||| ||||||| ||| ||||||||||| |||||||||||||    
T  37552217 atacattcatttttgttgacccaaatttctcttataaataggaccgg 37552263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 39402096 - 39402050
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  39402096 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 39402050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 47216829 - 47216783
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  47216829 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 47216783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 34042695 - 34042740
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaa 224  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||    
T  34042695 atactacctccggtcctatttataagagaaatttaggtcaacaaaa 34042740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 304
Target Start/End: Original strand, 11897130 - 11897178
Alignment:
Q  256 atacattcacttttgtttacctaaatttctcttgtaaataggaccggag 304  Q
    ||||||  ||||||||| ||| ||||||||||| |||||||||||||||    
T  11897130 atacatcaacttttgttgacccaaatttctcttataaataggaccggag 11897178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 14984843 - 14984883
Alignment:
Q  186 ctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||||||||||||||| ||||| ||| |||||||||||||    
T  14984843 ctccggtcctatttataagagaaatttaggtcaacaaaagt 14984883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 23278131 - 23278087
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaa 224  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||    
T  23278131 tactacctccggtcctatttataagagaaatttaggtcaacaaaa 23278087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 304
Target Start/End: Complemental strand, 44955252 - 44955212
Alignment:
Q  264 acttttgtttacctaaatttctcttgtaaataggaccggag 304  Q
    ||||||||| ||||||| ||||||| |||||||||||||||    
T  44955252 acttttgttgacctaaaattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 5e-56; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 172 - 310
Target Start/End: Complemental strand, 9395488 - 9395350
Alignment:
Q  172 ttaaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgt 271  Q
    |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9395488 ttaaataatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgt 9395389  T
Q  272 ttacctaaatttctcttgtaaataggaccggagatagta 310  Q
    | ||||||||||||||| ||||||||||||||| |||||    
T  9395388 tgacctaaatttctcttataaataggaccggaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 172 - 310
Target Start/End: Original strand, 36563530 - 36563668
Alignment:
Q  172 ttaaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgt 271  Q
    |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36563530 ttaaatcatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgt 36563629  T
Q  272 ttacctaaatttctcttgtaaataggaccggagatagta 310  Q
    | ||||||||||||||| ||||||||| ||||| |||||    
T  36563630 tgacctaaatttctcttataaataggatcggaggtagta 36563668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 173 - 304
Target Start/End: Complemental strand, 13103161 - 13103030
Alignment:
Q  173 taaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtt 272  Q
    ||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  13103161 taaataatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgtt 13103062  T
Q  273 tacctaaatttctcttgtaaataggaccggag 304  Q
     ||||||||||||||| |||||||||||||||    
T  13103061 gacctaaatttctcttataaataggaccggag 13103030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 17025755 - 17025624
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||    
T  17025755 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggaccta 17025656  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  17025655 aatttctcttataaataggaccggaggtagta 17025624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 41989406 - 41989537
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  41989406 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 41989505  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    ||||||||||  |||||||||||||| |||||    
T  41989506 aatttctcttacaaataggaccggaggtagta 41989537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 180 - 310
Target Start/End: Complemental strand, 23360072 - 23359942
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  23360072 tactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 23359973  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||| ||| |||||    
T  23359972 atttctcttataaataggaccagaggtagta 23359942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 37148955 - 37149085
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  37148955 tactccctccggtcctatttataatagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 37149054  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  37149055 atttctcttataaataggaccggaggtagta 37149085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 11795299 - 11795168
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  11795299 atactccctccagtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 11795200  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||| ||||| |||||    
T  11795199 aatttctcttataaataggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 173 - 304
Target Start/End: Complemental strand, 13033188 - 13033057
Alignment:
Q  173 taaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtt 272  Q
    ||||| ||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  13033188 taaataatactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgtt 13033089  T
Q  273 tacctaaatttctcttgtaaataggaccggag 304  Q
     ||||||||||||||| |||||||||||||||    
T  13033088 gacctaaatttctcttataaataggaccggag 13033057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 180 - 310
Target Start/End: Complemental strand, 20848203 - 20848074
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||| || ||||||    
T  20848203 tactccctccggtcctatttataagagaattttggg-caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaa 20848105  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  20848104 atttctcttataaataggaccggaggtagta 20848074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 37642085 - 37641953
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcac-ttttgtttacct 277  Q
    ||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||| |||| || ||||    
T  37642085 atactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccacatacattcactttttattgacct 37641986  T
Q  278 aaatttctcttgtaaataggaccggagatagta 310  Q
    ||||||||||| ||||||||||||||| |||||    
T  37641985 aaatttctcttataaataggaccggaggtagta 37641953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 205 - 310
Target Start/End: Complemental strand, 583094 - 582989
Alignment:
Q  205 agaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaataggaccggag 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  583094 agaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggag 582995  T
Q  305 atagta 310  Q
     |||||    
T  582994 gtagta 582989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 179 - 304
Target Start/End: Original strand, 26350349 - 26350474
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| ||||||||||||||||||  |||||||||  |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  26350349 atactccctccggtcctatttataaaagaattttgaatcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 26350448  T
Q  279 aatttctcttgtaaataggaccggag 304  Q
    |||||||||| ||||||||| |||||    
T  26350449 aatttctcttataaataggatcggag 26350474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 172 - 288
Target Start/End: Complemental strand, 6126962 - 6126846
Alignment:
Q  172 ttaaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgt 271  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||    
T  6126962 ttaaatgctactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgt 6126863  T
Q  272 ttacctaaatttctctt 288  Q
    | | |||||||||||||    
T  6126862 tgatctaaatttctctt 6126846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 21576077 - 21575970
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||    
T  21576077 atactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgaccta 21575978  T
Q  279 aatttctc 286  Q
    ||||||||    
T  21575977 aatttctc 21575970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 185 - 301
Target Start/End: Complemental strand, 4444085 - 4443969
Alignment:
Q  185 cctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttc 284  Q
    ||||||||| |||||||| ||||||||| | |||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| |||||||||||    
T  4444085 cctccggtcttatttataagagaattttagatcaacaaaagttgatgtatctatttaaaaattcagtctaaatacattcacttttgttgacctaaatttc 4443986  T
Q  285 tcttgtaaataggaccg 301  Q
    |||| ||||||||||||    
T  4443985 tcttataaataggaccg 4443969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 38361743 - 38361815
Alignment:
Q  232 tatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaataggaccggag 304  Q
    |||||| ||||||||||||| ||||||||||||||||| || |||||||||| |||| ||||||||| |||||    
T  38361743 tatctatttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggatcggag 38361815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 301
Target Start/End: Complemental strand, 966273 - 966157
Alignment:
Q  185 cctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttc 284  Q
    ||||| |||||||||||| ||||| ||||| ||||||||| |  |||||||| ||||||||||||||  | ||||||  ||| ||||| |   || ||||    
T  966273 cctccagtcctatttataagagaaatttggatcaacaaaaatgaatgtatctggttaaaaattcagtcaagatacatgaactgttgttgattcaactttc 966174  T
Q  285 tcttgtaaataggaccg 301  Q
    |||||||||||||||||    
T  966173 tcttgtaaataggaccg 966157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 13539909 - 13539986
Alignment:
Q  222 aaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaataggaccgga 303  Q
    ||||||||||||||||||||||||||||||     || ||| | ||||||| ||||||||||||||| ||||||||||||||    
T  13539909 aaagttgatgtatctagttaaaaattcagt----ctaaatttatttttgttgacctaaatttctcttataaataggaccgga 13539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 194 - 286
Target Start/End: Original strand, 2366352 - 2366444
Alignment:
Q  194 ctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctc 286  Q
    ||||||||| ||||| ||||||||||||| |||| |||||| | ||||||| |||||| |||||||||  |||||| || ||| || ||||||    
T  2366352 ctatttataagagaaatttgggtcaacaagagttcatgtatttggttaaaatttcagtccaaatacatcaacttttattaaccaaactttctc 2366444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 9006894 - 9006949
Alignment:
Q  192 tcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaatt 247  Q
    |||||||||||  ||| |||| ||||||||||||||||||||||||||| ||||||    
T  9006894 tcctatttataacagacttttaggtcaacaaaagttgatgtatctagttcaaaatt 9006949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 13033050 - 13033097
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||||    
T  13033050 atacttcctccggtcctatttataagagaaatttaggtcaacaaaagt 13033097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 13103023 - 13103070
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||||    
T  13103023 atacttcctccggtcctatttataagagaaatttaggtcaacaaaagt 13103070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 312
Target Start/End: Original strand, 27080999 - 27081072
Alignment:
Q  239 ttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaataggaccggagatagtagt 312  Q
    ||||||||| || | ||||||||  ||||||||| |||||||| |||||||||||||||| |||| | ||||||    
T  27080999 ttaaaaatttagattaaatacatcaacttttgttgacctaaatgtctcttgtaaataggatcggaaagagtagt 27081072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 37149092 - 37149039
Alignment:
Q  173 taaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  37149092 taaataatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 37149039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 11574166 - 11574214
Alignment:
Q  266 ttttgtttacctaaatttctcttgtaaataggaccggagatagtagtaa 314  Q
    ||||||| |||||||| |||||| |||||||||||||||| ||||||||    
T  11574166 ttttgttgacctaaatgtctcttataaataggaccggagagagtagtaa 11574214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 4443959 - 4444006
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||||||| |||||||||||||| ||||| ||| |||||||||||||    
T  4443959 atacttccttcggtcctatttataagagaaatttaggtcaacaaaagt 4444006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 36595782 - 36595845
Alignment:
Q  188 ccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagt 251  Q
    |||||| |||||||| |||||  || ||||||||||| |||||||||||  |||||||||||||    
T  36595782 ccggtcttatttataagagaaagttaggtcaacaaaaattgatgtatctgattaaaaattcagt 36595845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 3549553 - 3549663
Alignment:
Q  186 ctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttct 285  Q
    ||||||||||||||||| ||||| |||   | |||||||||||||||||   |||||||||| ||  || ||||||| | ||||||| ||  |||| |||    
T  3549553 ctccggtcctatttataagagaaatttatattaacaaaagttgatgtattcggttaaaaatttagaccagatacattaatttttgttgactaaaatatct 3549652  T
Q  286 cttgtaaatag 296  Q
    ||| |||||||    
T  3549653 cttataaatag 3549663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 9395350 - 9395396
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  9395350 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 9395396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 23359938 - 23359988
Alignment:
Q  176 atgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||||||| |||| ||||||||||||| ||||| ||| |||||||||||||    
T  23359938 atgatactacctctggtcctatttataagagaaatttaggtcaacaaaagt 23359988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 272
Target Start/End: Original strand, 40138821 - 40138882
Alignment:
Q  211 ttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtt 272  Q
    |||||| || |||||||||||||| |  |||||||||||||||||||| ||| | |||||||    
T  40138821 ttgggttaataaaagttgatgtatttgattaaaaattcagttcaaatatatttatttttgtt 40138882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 582983 - 583035
Alignment:
Q  174 aaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| ||||| |||||||||||||||||| ||||| ||| |||||||| ||||    
T  582983 aaataatactacctccggtcctatttataagagaaatttaggtcaacataagt 583035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 304
Target Start/End: Complemental strand, 39290868 - 39290781
Alignment:
Q  216 tcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaataggaccggag 304  Q
    |||||||||||| ||||||||| ||||||||| | | |||||||||  | ||||||| |||| |  ||||||| | |||||||||||||    
T  39290868 tcaacaaaagttaatgtatctaattaaaaatttaatccaaatacatcaatttttgttgacctgatattctcttat-aataggaccggag 39290781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 5e-56; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 180 - 310
Target Start/End: Complemental strand, 48340527 - 48340397
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  48340527 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 48340428  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||||||||||||||||||| |||||    
T  48340427 atttctcttgtaaataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 179 - 315
Target Start/End: Complemental strand, 10298110 - 10297974
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  10298110 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 10298011  T
Q  279 aatttctcttgtaaataggaccggagatagtagtaac 315  Q
    |||||||||| ||||||||||||||| ||||| ||||    
T  10298010 aatttctcttataaataggaccggaggtagtactaac 10297974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 40690995 - 40691126
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  40690995 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaaccta 40691094  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  40691095 aatttctcttataaataggaccggagttagta 40691126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 49823380 - 49823511
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  49823380 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 49823479  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  49823480 aatttctcttataaataggaccggaggtagta 49823511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 2787832 - 2787962
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  2787832 tactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 2787931  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| |||||||||||||||||||||    
T  2787932 atttctcttataaataggaccggagatagta 2787962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 176 - 310
Target Start/End: Complemental strand, 4238728 - 4238594
Alignment:
Q  176 atgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttac 275  Q
    |||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  4238728 atgatactacctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgac 4238629  T
Q  276 ctaaatttctcttgtaaataggaccggagatagta 310  Q
    ||||||||||||| ||||||||||||||| |||||    
T  4238628 ctaaatttctcttataaataggaccggaggtagta 4238594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 19557052 - 19557182
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  19557052 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 19557151  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  19557152 atttctcttataaataggaccggaggtagta 19557182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 44785396 - 44785526
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  44785396 tacttcctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 44785495  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  44785496 atttctcttataaataggaccggaggtagta 44785526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 185 - 310
Target Start/End: Original strand, 9111499 - 9111624
Alignment:
Q  185 cctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttc 284  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9111499 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttc 9111598  T
Q  285 tcttgtaaataggaccggagatagta 310  Q
    |||| |||||||||||| || |||||    
T  9111599 tcttataaataggaccgaaggtagta 9111624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 179 - 304
Target Start/End: Complemental strand, 17653843 - 17653718
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  17653843 atactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 17653744  T
Q  279 aatttctcttgtaaataggaccggag 304  Q
    |||||||||| |||||||||||||||    
T  17653743 aatttctcttataaataggaccggag 17653718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 179 - 304
Target Start/End: Complemental strand, 37509052 - 37508927
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  37509052 atactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 37508953  T
Q  279 aatttctcttgtaaataggaccggag 304  Q
    |||||||||| |||||||||||||||    
T  37508952 aatttctcttataaataggaccggag 37508927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 187 - 310
Target Start/End: Complemental strand, 22722054 - 22721931
Alignment:
Q  187 tccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctc 286  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  22722054 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 22721955  T
Q  287 ttgtaaataggaccggagatagta 310  Q
    || ||||||||||||||| |||||    
T  22721954 ttataaataggaccggaggtagta 22721931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 34080030 - 34080160
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||    
T  34080030 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaa 34080129  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  34080130 atttctcttataaataggaccggaggtagta 34080160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 8437556 - 8437425
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  8437556 atactccctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgaccta 8437457  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  8437456 aatttctcttataaataggaccggaggtagta 8437425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 187 - 310
Target Start/End: Original strand, 8817393 - 8817516
Alignment:
Q  187 tccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctc 286  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  8817393 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 8817492  T
Q  287 ttgtaaataggaccggagatagta 310  Q
    || |||||||||||| || |||||    
T  8817493 ttataaataggaccgaaggtagta 8817516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 51406804 - 51406673
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  51406804 atactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 51406705  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| |||||| |||||||| |||||    
T  51406704 aatttctcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 21295326 - 21295456
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||    
T  21295326 tactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaa 21295425  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  21295426 atttctcttataaataggaccggaggtagta 21295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 180 - 310
Target Start/End: Complemental strand, 38964522 - 38964392
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||    
T  38964522 tactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaa 38964423  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  38964422 atttctcttataaataggaccggaggtagta 38964392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 185 - 310
Target Start/End: Original strand, 42507360 - 42507485
Alignment:
Q  185 cctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttc 284  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||    
T  42507360 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttc 42507459  T
Q  285 tcttgtaaataggaccggagatagta 310  Q
    | || ||||||||||||||| |||||    
T  42507460 tattataaataggaccggaggtagta 42507485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 179 - 304
Target Start/End: Complemental strand, 46208161 - 46208036
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||    
T  46208161 atactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgaccta 46208062  T
Q  279 aatttctcttgtaaataggaccggag 304  Q
    |||||||||| |||||||||||||||    
T  46208061 aatttctcttataaataggaccggag 46208036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 190 - 310
Target Start/End: Original strand, 42170356 - 42170476
Alignment:
Q  190 ggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttg 289  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||| |||||||||||||||     
T  42170356 ggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctctta 42170455  T
Q  290 taaataggaccggagatagta 310  Q
    |||||| |||||||| |||||    
T  42170456 taaataagaccggaggtagta 42170476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 186 - 304
Target Start/End: Original strand, 36095686 - 36095804
Alignment:
Q  186 ctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttct 285  Q
    |||||||| |||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |    
T  36095686 ctccggtcttatttacaagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttat 36095785  T
Q  286 cttgtaaataggaccggag 304  Q
    ||| |||||||||||||||    
T  36095786 cttataaataggaccggag 36095804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 180 - 304
Target Start/End: Original strand, 6013336 - 6013460
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||  || |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  6013336 tactccctccggtcctatttataagagaattttgggtcaacaaaagtaaatttatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 6013435  T
Q  280 atttctcttgtaaataggaccggag 304  Q
    ||||||||| ||||| |||| ||||    
T  6013436 atttctcttataaattggactggag 6013460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 180 - 301
Target Start/End: Complemental strand, 35513603 - 35513482
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||| |||||||||||  |||||| ||| |||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  35513603 tactccctccgatcctatttataaaagaattctggatcaataaaaggtgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 35513504  T
Q  280 atttctcttgtaaataggaccg 301  Q
    ||||||||| ||||||||||||    
T  35513503 atttctcttataaataggaccg 35513482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 192 - 303
Target Start/End: Original strand, 33942944 - 33943055
Alignment:
Q  192 tcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgta 291  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||| ||||| || ||    
T  33942944 tcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttata 33943043  T
Q  292 aataggaccgga 303  Q
    ||||||| ||||    
T  33943044 aataggatcgga 33943055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 180 - 302
Target Start/End: Complemental strand, 5323337 - 5323214
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagtt-aaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    |||| |||||| | ||||||||| |  || ||||||||||||||||||||||||| | ||| ||||||||| ||||||||||||   ||||||| ||  |    
T  5323337 tactccctccgatactatttataagtaaaatttgggtcaacaaaagttgatgtatttggttaaaaaattcaattcaaatacattattttttgttgactca 5323238  T
Q  279 aatttctcttgtaaataggaccgg 302  Q
    | ||||| ||||||||||||||||    
T  5323237 attttcttttgtaaataggaccgg 5323214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 34988205 - 34988140
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaa 245  Q
    |||| |||||||||||||||||| || |  |||| |||||||| ||||||||||||||||||||||    
T  34988205 tactccctccggtcctatttataagaaatatttgagtcaacaatagttgatgtatctagttaaaaa 34988140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 9027141 - 9027197
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatc 235  Q
    ||||| |||||||||||||||||| || ||  |||||||||||||||||||||||||    
T  9027141 atactccctccggtcctatttataagataaagttgggtcaacaaaagttgatgtatc 9027197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 304
Target Start/End: Complemental strand, 9213646 - 9213522
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| ||||| |||||||||||  ||||| ||| ||||||||||| ||||||||| | |||| ||| | ||| || ||||||  ||||||||| ||  ||    
T  9213646 tactccctcccgtcctatttattagagaaatttaggtcaacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttgactaaa 9213547  T
Q  280 atttctcttgtaaataggaccggag 304  Q
    || ||| || |||||||||||||||    
T  9213546 atgtcttttataaataggaccggag 9213522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 49687966 - 49687902
Alignment:
Q  215 gtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||||||||||||||| ||||||||| |||||| || | ||||||||  ||||||||||||||||    
T  49687966 gtcaacaaaagttgatttatctagtttaaaatttagataaaatacatcaacttttgtttacctaa 49687902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 29285790 - 29285873
Alignment:
Q  210 tttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaata 295  Q
    ||||| |||||||||||| |||||| ||||| |||||| || ||| |||  |||||||||||| |||||||||| |||| ||||||    
T  29285790 tttggatcaacaaaagtttatgtatgtagttcaaaatttagatcagata--ttcacttttgttgacctaaatttatcttataaata 29285873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 4238587 - 4238640
Alignment:
Q  173 taaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  4238587 taaataatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 4238640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 17653701 - 17653758
Alignment:
Q  169 aagttaaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||||||| | |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  17653701 aagttaaaaggtactccctccggtcctatttataagagaaatttaggtcaacaaaagt 17653758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 2131802 - 2131746
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatct 236  Q
    |||| |||||||||||| ||||  ||||  |||||||||||||||||||||||||||    
T  2131802 tactccctccggtcctacttatgagagacatttgggtcaacaaaagttgatgtatct 2131746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 19557183 - 19557136
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  19557183 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 19557136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 21295457 - 21295410
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  21295457 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 21295410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 22721930 - 22721977
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  22721930 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 22721977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 33128261 - 33128206
Alignment:
Q  255 aatacattcacttttgtttacctaaatttctcttgtaaataggaccggagatagta 310  Q
    |||||||| ||||||||| ||||||||||||||| ||| |||||| ||||| ||||    
T  33128261 aatacattaacttttgttgacctaaatttctcttataattaggactggagagagta 33128206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 34080161 - 34080114
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  34080161 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 34080114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 44785527 - 44785480
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  44785527 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 44785480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 46208029 - 46208076
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  46208029 atactccctccggtcctatttataagagaaatttaggtcaacaaaagt 46208076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 49823512 - 49823465
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  49823512 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 49823465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 2787970 - 2787916
Alignment:
Q  172 ttaaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||||| |||||  ||||||||||||||||| ||||| ||| |||||||||||||    
T  2787970 ttaaataatactatctccggtcctatttataagagaaatttaggtcaacaaaagt 2787916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 10297979 - 10298025
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  10297979 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 10298025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 37508921 - 37508967
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  37508921 tactccctccggtcctatttataagagaaatttaggtcaacaaaagt 37508967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 303
Target Start/End: Complemental strand, 8092684 - 8092595
Alignment:
Q  214 ggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaataggaccgga 303  Q
    |||||||| |||||||||||||| |||||||||| |||  | ||||||  ||||| ||| |   || |||||||| ||||||||||||||    
T  8092684 ggtcaacagaagttgatgtatctggttaaaaatttagtcgagatacatcaactttagttgattcaattttctcttataaataggaccgga 8092595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 9213515 - 9213572
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatct 236  Q
    ||||| ||||||||||||||||||  |||  |||  ||||||||||||||||||||||    
T  9213515 atactccctccggtcctatttataaaagacattttagtcaacaaaagttgatgtatct 9213572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 296
Target Start/End: Original strand, 26019487 - 26019595
Alignment:
Q  187 tccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctc 286  Q
    |||| ||||||||||| |||||  || ||||||| |||||| |||||||| ||| |||||| |||  | ||||||| || |||||| ||| || ||||||    
T  26019487 tccgatcctatttataagagaaaatttggtcaaccaaagtttatgtatctggttcaaaatttagtcaagatacattaac-tttgttaacccaactttctc 26019585  T
Q  287 ttgtaaatag 296  Q
    || |||||||    
T  26019586 ttataaatag 26019595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 34988074 - 34988131
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatct 236  Q
    ||||| ||| |||||||||||||  ||||  ||||||||||||||||||||| |||||    
T  34988074 atactcccttcggtcctatttattagagacatttgggtcaacaaaagttgatctatct 34988131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 8951943 - 8951987
Alignment:
Q  227 tgatgtatctagttaaaaattcagttcaaatacattcacttttgt 271  Q
    |||||||| | |||||||||||||| |||||||||| ||||||||    
T  8951943 tgatgtattttgttaaaaattcagtccaaatacattaacttttgt 8951987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 304
Target Start/End: Complemental strand, 21295372 - 21295332
Alignment:
Q  264 acttttgtttacctaaatttctcttgtaaataggaccggag 304  Q
    ||||||||| ||||||| ||||||| |||||||||||||||    
T  21295372 acttttgttgacctaaaattctcttataaataggaccggag 21295332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 38964386 - 38964438
Alignment:
Q  174 aaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| ||||| |||||||||||||||||| ||||| ||| | |||||||||||    
T  38964386 aaataatactacctccggtcctatttataagagaaatttagatcaacaaaagt 38964438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 45652068 - 45652128
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagt 239  Q
    ||||| ||||| |||||||||||| ||||  |||| |||||||||| | ||||||||||||    
T  45652068 atactccctccagtcctatttataagagacatttgagtcaacaaaaatggatgtatctagt 45652128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 304
Target Start/End: Original strand, 46208114 - 46208154
Alignment:
Q  264 acttttgtttacctaaatttctcttgtaaataggaccggag 304  Q
    ||||||||| ||||||| ||||||| |||||||||||||||    
T  46208114 acttttgttgacctaaaattctcttataaataggaccggag 46208154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 8e-55; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 179 - 311
Target Start/End: Original strand, 37666609 - 37666741
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37666609 atactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgaccta 37666708  T
Q  279 aatttctcttgtaaataggaccggagatagtag 311  Q
    |||||||||| ||||||||||||||| ||||||    
T  37666709 aatttctcttataaataggaccggaggtagtag 37666741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 3055689 - 3055558
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  3055689 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 3055590  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  3055589 aatttctcttataaataggaccggaggtagta 3055558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 37990012 - 37990143
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  37990012 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 37990111  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  37990112 aatttctcttataaataggaccggaggtagta 37990143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 41478638 - 41478769
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  41478638 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 41478737  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  41478738 aatttctcttataaataggaccggaggtagta 41478769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 44398817 - 44398686
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  44398817 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 44398718  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  44398717 aatttctcttataaataggaccggaggtagta 44398686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 13197710 - 13197840
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  13197710 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 13197809  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  13197810 atttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 310
Target Start/End: Complemental strand, 15896972 - 15896842
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  15896972 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 15896873  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  15896872 atttctcttataaataggaccggaggtagta 15896842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 16044317 - 16044447
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16044317 tactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaa 16044416  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  16044417 atttctcttataaataggaccggaggtagta 16044447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 173 - 310
Target Start/End: Original strand, 16243776 - 16243913
Alignment:
Q  173 taaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtt 272  Q
    ||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16243776 taaataatactccatccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgtt 16243875  T
Q  273 tacctaaatttctcttgtaaataggaccggagatagta 310  Q
     |||||||||| |||| |||||||||||||||||||||    
T  16243876 gacctaaatttttcttataaataggaccggagatagta 16243913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 9047754 - 9047885
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  9047754 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactttttttgaccta 9047853  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| |||||| ||||||||||||||    
T  9047854 aatttctcttataaatatgaccggagatagta 9047885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 44397678 - 44397547
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  44397678 atactccccccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 44397579  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  44397578 aatttctcttataaataggaccggaggtagta 44397547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 174 - 310
Target Start/End: Original strand, 6648513 - 6648649
Alignment:
Q  174 aaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttt 273  Q
    |||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||     
T  6648513 aaataatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttg 6648612  T
Q  274 acctaaatttctcttgtaaataggaccggagatagta 310  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  6648613 acctaaatttctcttataaataggaccggaggtagta 6648649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 38917521 - 38917652
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  38917521 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgaccta 38917620  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    ||||| |||| ||||||||||||||| |||||    
T  38917621 aatttatcttataaataggaccggaggtagta 38917652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 180 - 304
Target Start/End: Complemental strand, 15372356 - 15372232
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||    
T  15372356 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaa 15372257  T
Q  280 atttctcttgtaaataggaccggag 304  Q
    ||||||||| |||||||||| ||||    
T  15372256 atttctcttataaataggactggag 15372232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 13344615 - 13344484
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  13344615 atactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgaccta 13344516  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||| ||||||| |||||    
T  13344515 aatttctcttataaatagaaccggaggtagta 13344484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 12337937 - 12338067
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  12337937 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaa 12338036  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    |||| |||| ||||||| ||||||| |||||    
T  12338037 atttttcttataaatagaaccggaggtagta 12338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 179 - 299
Target Start/End: Original strand, 41492895 - 41493015
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||    
T  41492895 atactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgaccta 41492994  T
Q  279 aatttctcttgtaaataggac 299  Q
    ||||||| || ||||||||||    
T  41492995 aatttcttttataaataggac 41493015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 179 - 304
Target Start/End: Original strand, 30099181 - 30099306
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||| ||||||| |||||    
T  30099181 atactccctccggtcctatttattagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcaatccaaatacattcatttttgttgaccta 30099280  T
Q  279 aatttctcttgtaaataggaccggag 304  Q
    |||||||||| ||||||||| |||||    
T  30099281 aatttctcttataaataggatcggag 30099306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 199 - 310
Target Start/End: Original strand, 4683951 - 4684062
Alignment:
Q  199 tatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaatagga 298  Q
    |||| ||||||||| |||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||    
T  4683951 tataagagaattttcggtttacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 4684050  T
Q  299 ccggagatagta 310  Q
    |||||| |||||    
T  4684051 ccggaggtagta 4684062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 174 - 304
Target Start/End: Original strand, 12170393 - 12170523
Alignment:
Q  174 aaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttt 273  Q
    |||| ||||||| |||| || |||||||| |||||  |||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||| ||     
T  12170393 aaataatacttcatccgatcttatttataagagaaacttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattaacttttattg 12170492  T
Q  274 acctaaatttctcttgtaaataggaccggag 304  Q
    |||||| |||||||||||||||||| |||||    
T  12170493 acctaattttctcttgtaaataggatcggag 12170523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 185 - 282
Target Start/End: Original strand, 44804583 - 44804680
Alignment:
Q  185 cctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatt 282  Q
    |||||||||||||||||| |||||||||  || |||||||||||||||||||||||||||||||||| |||||||||||| || |||| |||||||||    
T  44804583 cctccggtcctatttataagagaattttaagttaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatt 44804680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 288
Target Start/End: Complemental strand, 16734908 - 16734805
Alignment:
Q  185 cctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttc 284  Q
    ||||| |||||||||||| |||||  ||| || ||||||||||||||||| | |||||||||||||| || ||||||  ||||||||| ||| || ||||    
T  16734908 cctccagtcctatttataagagaaagttgagtaaacaaaagttgatgtatttggttaaaaattcagtccagatacatcaacttttgttgaccaaactttc 16734809  T
Q  285 tctt 288  Q
    ||||    
T  16734808 tctt 16734805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 310
Target Start/End: Complemental strand, 31150769 - 31150653
Alignment:
Q  189 cggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctctt 288  Q
    |||||||||||||| |||||   ||||||||||||      |||||||||||||||||| ||| |||||||||  ||||||||| ||  || ||||||||    
T  31150769 cggtcctatttataagagaaacatgggtcaacaaat-----tgtatctagttaaaaatttagtccaaatacataaacttttgttgacgcaactttctctt 31150675  T
Q  289 gtaaataggaccggagatagta 310  Q
     ||||||||| |||||| ||||    
T  31150674 ataaataggatcggagagagta 31150653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 279
Target Start/End: Complemental strand, 41453149 - 41453090
Alignment:
Q  220 caaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    ||||||||||||||| | |||||||||||||| |||||||||| |||||| || ||||||    
T  41453149 caaaagttgatgtattttgttaaaaattcagtccaaatacattaacttttattgacctaa 41453090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 15896835 - 15896888
Alignment:
Q  173 taaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  15896835 taaattatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 15896888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 23227408 - 23227348
Alignment:
Q  174 aaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtat 234  Q
    |||| ||||||||| | |||||||||||| ||||  ||| |||||||||||||||||||||    
T  23227408 aaataatacttccttcagtcctatttataagagacattttggtcaacaaaagttgatgtat 23227348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 3055557 - 3055604
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  3055557 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 3055604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 4684063 - 4684016
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  4684063 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 4684016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 304
Target Start/End: Complemental strand, 13724159 - 13724108
Alignment:
Q  253 caaatacattcacttttgtttacctaaatttctcttgtaaataggaccggag 304  Q
    |||||||||  ||||||||| ||||| || ||||||||||||||||||||||    
T  13724159 caaatacatcaacttttgttgacctagatgtctcttgtaaataggaccggag 13724108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 37990144 - 37990097
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  37990144 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 37990097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 41478770 - 41478723
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  41478770 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 41478723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 44397546 - 44397593
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  44397546 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 44397593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 44398685 - 44398732
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  44398685 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 44398732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 13197840 - 13197794
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  13197840 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 13197794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 16044447 - 16044401
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  16044447 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 16044401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 305
Target Start/End: Complemental strand, 36688977 - 36688887
Alignment:
Q  215 gtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaataggaccggaga 305  Q
    |||||||||| ||||||||||| ||| |||||||||   | ||||||  || |||||| ||| || |||||||| ||||||||||| ||||    
T  36688977 gtcaacaaaaattgatgtatcttgtttaaaattcagacaagatacatcaacgtttgttgaccaaactttctcttataaataggaccagaga 36688887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 37666740 - 37666694
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  37666740 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 37666694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 13724102 - 13724167
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaa 245  Q
    |||| |||||||||||||||| | ||||  | | ||||||||||||||||||||| | ||||||||    
T  13724102 tactccctccggtcctatttacaagagacatctaggtcaacaaaagttgatgtatttggttaaaaa 13724167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 15372219 - 15372272
Alignment:
Q  173 taaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| ||||| ||||| |||||||||||| ||||| ||| |||||||||||||    
T  15372219 taaataatactccctccagtcctatttataagagaaatttaggtcaacaaaagt 15372272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 304
Target Start/End: Original strand, 30852648 - 30852741
Alignment:
Q  211 ttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaataggaccggag 304  Q
    ||||| ||||||||||| ||||||||  || || |||||||  | ||||||  |||||| || | |||| |||||||| |||||||||||||||    
T  30852648 ttgggacaacaaaagtttatgtatctgattcaatattcagtctagatacataaacttttattaatctaactttctcttataaataggaccggag 30852741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 304
Target Start/End: Complemental strand, 41492942 - 41492902
Alignment:
Q  264 acttttgtttacctaaatttctcttgtaaataggaccggag 304  Q
    ||||||||| ||| ||||||||||| |||||||||||||||    
T  41492942 acttttgttgacccaaatttctcttataaataggaccggag 41492902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 3e-54; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 54611 - 54742
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  54611 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 54710  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  54711 aatttctcttataaataggaccggaggtagta 54742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 2890161 - 2890292
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  2890161 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 2890260  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  2890261 aatttctcttataaataggaccggaggtagta 2890292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 7785777 - 7785908
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  7785777 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 7785876  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  7785877 aatttctcttataaataggaccggaggtagta 7785908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 310
Target Start/End: Complemental strand, 6552785 - 6552655
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  6552785 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 6552686  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  6552685 atttctcttataaataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 180 - 304
Target Start/End: Complemental strand, 31654743 - 31654619
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  31654743 tacttcctccggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 31654644  T
Q  280 atttctcttgtaaataggaccggag 304  Q
    ||||||||| |||||||||||||||    
T  31654643 atttctcttataaataggaccggag 31654619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 178 - 310
Target Start/End: Original strand, 43199352 - 43199484
Alignment:
Q  178 gatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacct 277  Q
    |||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  43199352 gatactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 43199451  T
Q  278 aaatttctcttgtaaataggaccggagatagta 310  Q
    ||||||||||| ||||||||||||||| |||||    
T  43199452 aaatttctcttataaataggaccggaggtagta 43199484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 7805698 - 7805829
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  7805698 atactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 7805797  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  7805798 aatttctcttataaataggaccggaggtagta 7805829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 39571202 - 39571333
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||    
T  39571202 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatcta 39571301  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  39571302 aatttctcttataaataggaccggaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 44498186 - 44498317
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  44498186 atactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 44498285  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  44498286 aatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 3304278 - 3304408
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  3304278 tactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 3304377  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  3304378 atttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 186 - 310
Target Start/End: Original strand, 12343146 - 12343270
Alignment:
Q  186 ctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttct 285  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  12343146 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 12343245  T
Q  286 cttgtaaataggaccggagatagta 310  Q
    ||| ||||||||||||||| |||||    
T  12343246 cttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 7012302 - 7012171
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| | |||    
T  7012302 atacttcctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgatcta 7012203  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  7012202 aatttctcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 12763653 - 12763784
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  12763653 atactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 12763752  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| |||||| |||||||| |||||    
T  12763753 aatttctcttataaataagaccggaggtagta 12763784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 25600999 - 25601130
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  25600999 atactccctccggtcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 25601098  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||| ||||| |||||    
T  25601099 aatttctcttataaataggatcggaggtagta 25601130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 32114474 - 32114605
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  32114474 atactccctccggtcctatttataagaaaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 32114573  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  32114574 aatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 32211362 - 32211493
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  32211362 atactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcatttttgttgaccta 32211461  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  32211462 aatttctcttataaataggaccggaggtagta 32211493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 33289261 - 33289391
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | ||||    
T  33289261 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatctaa 33289360  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  33289361 atttctcttataaataggaccggaggtagta 33289391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 15888351 - 15888482
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| ||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||    
T  15888351 atactccctccagttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgaccta 15888450  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  15888451 aatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 172 - 310
Target Start/End: Complemental strand, 13578995 - 13578857
Alignment:
Q  172 ttaaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgt 271  Q
    ||||| |||||| | ||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  13578995 ttaaaagatactccatccagtcatatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttat 13578896  T
Q  272 ttacctaaatttctcttgtaaataggaccggagatagta 310  Q
    | ||||||||||||||| ||||||| || |||| |||||    
T  13578895 tgacctaaatttctcttataaatagaactggaggtagta 13578857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 179 - 304
Target Start/End: Complemental strand, 8587301 - 8587176
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||||||||||||| |||||||| |||||  ||| ||||| ||||||||||||||||||||||||||| |||  ||||||||  ||||||||| ||| |    
T  8587301 atacttcctccggtcttatttataagagaaacttgagtcaataaaagttgatgtatctagttaaaaatttagtcaaaatacatcaacttttgttgaccaa 8587202  T
Q  279 aatttctcttgtaaataggaccggag 304  Q
    | |||||||| |||||||||||||||    
T  8587201 actttctcttataaataggaccggag 8587176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 179 - 304
Target Start/End: Complemental strand, 28463742 - 28463617
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||| ||||||||||   ||||| |||||||| | ||||||||| ||||| ||| |||||||||| |||||||||  ||||||||| ||| |    
T  28463742 atactccctccgatcctatttattgcagaatattgggtcaccgaaagttgatatatctggttcaaaattcagtccaaatacatcaacttttgttgaccca 28463643  T
Q  279 aatttctcttgtaaataggaccggag 304  Q
    | |||||||| |||||||||||||||    
T  28463642 actttctcttataaataggaccggag 28463617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 187 - 298
Target Start/End: Original strand, 24691986 - 24692096
Alignment:
Q  187 tccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctc 286  Q
    ||||||||||||| ||  |||| ||||||||||||||||||||| ||||| ||| ||||||||||||| ||||||  ||||||||| |||||| ||| ||    
T  24691986 tccggtcctatttttaaaagaaatttgggtcaacaaaagttgatatatctggtt-aaaattcagttcagatacatcaacttttgttgacctaactttttc 24692084  T
Q  287 ttgtaaatagga 298  Q
    || |||||||||    
T  24692085 ttataaatagga 24692096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 173 - 261
Target Start/End: Complemental strand, 27422327 - 27422239
Alignment:
Q  173 taaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacat 261  Q
    ||||| ||||| ||| |||||||||||||| ||||| ||||||||||||||| |  |||||||| |||||||||||||| |||||||||    
T  27422327 taaataatactcccttcggtcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccaaatacat 27422239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 248 - 310
Target Start/End: Original strand, 4245649 - 4245711
Alignment:
Q  248 cagttcaaatacattcacttttgtttacctaaatttctcttgtaaataggaccggagatagta 310  Q
    |||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||    
T  4245649 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4245711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 304
Target Start/End: Complemental strand, 17007026 - 17006917
Alignment:
Q  195 tatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaat 294  Q
    |||||||| ||||| |||  ||||| ||||||||||||||||  |||| |||||||| || || |||  ||||||||| ||| || |||||||| |||||    
T  17007026 tatttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaat 17006927  T
Q  295 aggaccggag 304  Q
    |||| |||||    
T  17006926 aggatcggag 17006917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 304
Target Start/End: Original strand, 17570221 - 17570330
Alignment:
Q  195 tatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaat 294  Q
    |||||||| ||||| |||  ||||| ||||||||||||||||  |||| |||||||| || || |||  ||||||||| ||| || |||||||| |||||    
T  17570221 tatttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaat 17570320  T
Q  295 aggaccggag 304  Q
    |||| |||||    
T  17570321 aggatcggag 17570330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 28463616 - 28463665
Alignment:
Q  185 cctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtat 234  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  28463616 cctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtat 28463665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 8587170 - 8587224
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtat 234  Q
    |||| |||||||||||||||||| |||||  || |||||||||||||||||||||    
T  8587170 tactccctccggtcctatttataagagaaagtttggtcaacaaaagttgatgtat 8587224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 54749 - 54696
Alignment:
Q  173 taaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  54749 taaataatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 54696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 43199491 - 43199438
Alignment:
Q  173 taaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  43199491 taaattatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 43199438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 15688038 - 15688086
Alignment:
Q  188 ccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatct 236  Q
    |||||||| |||||| |||||  ||||||||||||||||||||||||||    
T  15688038 ccggtcctgtttataagagaaagttgggtcaacaaaagttgatgtatct 15688086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 2890293 - 2890246
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  2890293 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 2890246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 4245712 - 4245665
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  4245712 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 4245665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 7785909 - 7785862
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  7785909 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 7785862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 7805830 - 7805783
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  7805830 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 7805783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 17006916 - 17006967
Alignment:
Q  185 cctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatct 236  Q
    |||||| ||||||||||| |||||  ||||||||||||||||||||| ||||    
T  17006916 cctccgatcctatttataagagaaagttgggtcaacaaaagttgatggatct 17006967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 17570331 - 17570280
Alignment:
Q  185 cctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatct 236  Q
    |||||| ||||||||||| |||||  ||||||||||||||||||||| ||||    
T  17570331 cctccgatcctatttataagagaaagttgggtcaacaaaagttgatggatct 17570280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 35564706 - 35564757
Alignment:
Q  196 atttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaatt 247  Q
    ||||||| |||| ||||| |||||||||| ||||||||||||||| ||||||    
T  35564706 atttataagagatttttgagtcaacaaaatttgatgtatctagttcaaaatt 35564757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 3304408 - 3304362
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  3304408 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 3304362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 6552655 - 6552701
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  6552655 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 6552701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 12343270 - 12343224
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  12343270 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 12343224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 15888482 - 15888436
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  15888482 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 15888436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 31654613 - 31654659
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  31654613 tactccctccggtcctatttataagagaaatttaggtcaacaaaagt 31654659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 32114605 - 32114559
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  32114605 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 32114559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 33057717 - 33057655
Alignment:
Q  187 tccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattca 249  Q
    ||||||| |||||||| |||||  || ||||||||||| ||||||||||| ||||||| ||||    
T  33057717 tccggtcttatttataagagaaagtttggtcaacaaaaattgatgtatctggttaaaatttca 33057655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 44498317 - 44498271
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  44498317 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 44498271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 27422266 - 27422311
Alignment:
Q  256 atacattcacttttgtttacctaaatttctcttgtaaataggaccg 301  Q
    ||||||||| ||||||| ||| ||||||||||| ||||||||||||    
T  27422266 atacattcatttttgttgacccaaatttctcttataaataggaccg 27422311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 32211494 - 32211449
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaa 224  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||    
T  32211494 atactacctccggtcctatttataagagaaatttaggtcaacaaaa 32211449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 12763786 - 12763738
Alignment:
Q  178 gatacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||||| ||||||||| |||||||| ||||| ||| |||||||||||||    
T  12763786 gatactacctccggtcttatttataagagaaatttaggtcaacaaaagt 12763738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 304
Target Start/End: Complemental strand, 25601054 - 25601006
Alignment:
Q  256 atacattcacttttgtttacctaaatttctcttgtaaataggaccggag 304  Q
    ||||||| ||||||||| ||| ||| ||||||| |||||||||||||||    
T  25601054 atacattaacttttgttgacccaaaattctcttataaataggaccggag 25601006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 30171487 - 30171535
Alignment:
Q  185 cctccggtcctatttatacgagaattttgggtcaacaaaagttgatgta 233  Q
    |||||| ||||||||| | |||||||||| ||||||||||||| |||||    
T  30171487 cctccgatcctatttacaagagaattttgagtcaacaaaagttaatgta 30171535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 1e-53; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 310
Target Start/End: Complemental strand, 47833741 - 47833611
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  47833741 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 47833642  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  47833641 atttctcttataaataggaccggaggtagta 47833611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 173 - 310
Target Start/End: Complemental strand, 48336400 - 48336263
Alignment:
Q  173 taaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtt 272  Q
    ||||| ||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  48336400 taaataatactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgtt 48336301  T
Q  273 tacctaaatttctcttgtaaataggaccggagatagta 310  Q
     ||||||||||||||| ||||||||||||||| |||||    
T  48336300 gacctaaatttctcttataaataggaccggaggtagta 48336263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 53337501 - 53337370
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  53337501 atactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 53337402  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  53337401 aatttctcttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 180 - 310
Target Start/End: Complemental strand, 3372251 - 3372121
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  3372251 tactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 3372152  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  3372151 atttctcttataaataggaccggaggtagta 3372121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 6121893 - 6122023
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||    
T  6121893 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaa 6121992  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  6121993 atttctcttataaataggaccggaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 180 - 310
Target Start/End: Complemental strand, 7579440 - 7579310
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||    
T  7579440 tacttcctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacctaa 7579341  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  7579340 atttctcttataaataggaccggaggtagta 7579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 20538686 - 20538816
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  20538686 tactccctccggtcctatttataagagaattttgggtcaacaaaatttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 20538785  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  20538786 atttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 180 - 304
Target Start/End: Complemental strand, 43900679 - 43900555
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||    
T  43900679 tacttcctccggtcctatttataagagaattttgggttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaa 43900580  T
Q  280 atttctcttgtaaataggaccggag 304  Q
    ||||||||| |||||||||||||||    
T  43900579 atttctcttataaataggaccggag 43900555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 3993107 - 3992976
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |    
T  3993107 atactccctccggtcttatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccga 3993008  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  3993007 aatttctcttataaataggaccggaggtagta 3992976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 24704501 - 24704370
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  24704501 atactccctccgatcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 24704402  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  24704401 aatttctcttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 180 - 311
Target Start/End: Complemental strand, 46797855 - 46797724
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  46797855 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 46797756  T
Q  280 atttctcttgtaaataggaccggagatagtag 311  Q
    ||||||||| ||||||| ||||||| ||||||    
T  46797755 atttctcttataaatagaaccggaggtagtag 46797724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 52756806 - 52756675
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| ||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||    
T  52756806 atactcccttcggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgaccta 52756707  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| |||||||||||||||||||||    
T  52756706 aatttctcttataaataggaccggagatagta 52756675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 180 - 310
Target Start/End: Complemental strand, 42797862 - 42797732
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  42797862 tactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 42797763  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| || |||||||||||| |||||    
T  42797762 atttctcttatatataggaccggaggtagta 42797732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 174 - 310
Target Start/End: Original strand, 47838611 - 47838747
Alignment:
Q  174 aaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttt 273  Q
    |||| ||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  47838611 aaataatactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttg 47838710  T
Q  274 acctaaatttctcttgtaaataggaccggagatagta 310  Q
    ||| ||||||||||| ||||||||| ||||| |||||    
T  47838711 accgaaatttctcttataaataggatcggaggtagta 47838747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 179 - 298
Target Start/End: Complemental strand, 3422191 - 3422073
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  3422191 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattca-ttttgttgaccta 3422093  T
Q  279 aatttctcttgtaaatagga 298  Q
    |||||||||| |||||||||    
T  3422092 aatttctcttataaatagga 3422073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 3904682 - 3904813
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||| |||||    
T  3904682 atactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgaccta 3904781  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    ||||||| || ||||||||||||||| |||||    
T  3904782 aatttcttttataaataggaccggaggtagta 3904813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 301
Target Start/End: Complemental strand, 33621927 - 33621805
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  33621927 atactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 33621828  T
Q  279 aatttctcttgtaaataggaccg 301  Q
    |||||||||| ||||||| ||||    
T  33621827 aatttctcttataaatagaaccg 33621805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 51894582 - 51894712
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||| ||||||    
T  51894582 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaa 51894681  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    |||| |||| ||||||||||||||| |||||    
T  51894682 atttttcttataaataggaccggaggtagta 51894712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 179 - 301
Target Start/End: Original strand, 41469765 - 41469887
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||    
T  41469765 atactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgaccta 41469864  T
Q  279 aatttctcttgtaaataggaccg 301  Q
    ||||||| || ||||||||||||    
T  41469865 aatttcttttataaataggaccg 41469887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 186 - 310
Target Start/End: Complemental strand, 5987000 - 5986876
Alignment:
Q  186 ctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttct 285  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||| ||||||    
T  5987000 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctatatttct 5986901  T
Q  286 cttgtaaataggaccggagatagta 310  Q
    ||| ||||||| | ||||| |||||    
T  5986900 cttataaatagaatcggaggtagta 5986876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 185 - 304
Target Start/End: Original strand, 40913194 - 40913313
Alignment:
Q  185 cctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttc 284  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||| | |||||||||    
T  40913194 cctccggtcctatttataagagaaatttggatcaacaaaagttgatatatccagttaaaaattcagtccaaatacattcacttttgttgatctaaatttc 40913293  T
Q  285 tcttgtaaataggaccggag 304  Q
    |||| |||||||||||||||    
T  40913294 tcttataaataggaccggag 40913313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 199 - 310
Target Start/End: Complemental strand, 33551312 - 33551201
Alignment:
Q  199 tatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaatagga 298  Q
    |||| |||||||||||||  |||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||| |||||||||    
T  33551312 tataagagaattttgggtttacaaaagttgatgtatctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaatagga 33551213  T
Q  299 ccggagatagta 310  Q
    |||||| |||||    
T  33551212 ccggaggtagta 33551201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 199 - 310
Target Start/End: Complemental strand, 26231688 - 26231577
Alignment:
Q  199 tatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaatagga 298  Q
    |||| ||||||||| |||  |||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||| |||||||||    
T  26231688 tataagagaattttcggtttacaaaagttgatatatctagttaaaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataaatagga 26231589  T
Q  299 ccggagatagta 310  Q
    |||||| |||||    
T  26231588 ccggaggtagta 26231577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 187 - 298
Target Start/End: Original strand, 41615683 - 41615794
Alignment:
Q  187 tccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctc 286  Q
    |||||||||||||||| |||||  |||| ||||||||||||||||||| |||||||||||| ||| |||||||||| ||||||||| |||||| ||||||    
T  41615683 tccggtcctatttataagagaaaattggatcaacaaaagttgatgtatttagttaaaaattaagtccaaatacattaacttttgttgacctaattttctc 41615782  T
Q  287 ttgtaaatagga 298  Q
    || |||||||||    
T  41615783 ttataaatagga 41615794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 304
Target Start/End: Complemental strand, 17344328 - 17344219
Alignment:
Q  195 tatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaat 294  Q
    |||||||| ||||| ||||| ||||||||||||||||||||   |||||||||||||||| ||||||  ||||||||| |  ||| |||||||| |||||    
T  17344328 tatttataagagaaatttggatcaacaaaagttgatgtatccgattaaaaattcagttcagatacatcaacttttgttgatttaactttctcttataaat 17344229  T
Q  295 aggaccggag 304  Q
    || |||||||    
T  17344228 agaaccggag 17344219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 29845769 - 29845656
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagtt-gatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    |||| |||||||||||||||||| |||      || |||||||||||| ||||||| ||||||||||||||||||||||| ||| | ||||||| |||||    
T  29845769 tactccctccggtcctatttataagag------ggatcaacaaaagtttgatgtat-tagttaaaaattcagttcaaatatattaatttttgttgaccta 29845677  T
Q  279 aatttctcttgtaaataggac 299  Q
    |||||||||| ||| ||||||    
T  29845676 aatttctcttataagtaggac 29845656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 45478225 - 45478140
Alignment:
Q  177 tgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacatt 262  Q
    |||||| ||||||| ||||||||||| ||||| | |||||||| |||||||||||||||  ||||||||||||||| | |||||||    
T  45478225 tgatacgtcctccgatcctatttataagagaaatgtgggtcaataaaagttgatgtatccggttaaaaattcagttgagatacatt 45478140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 180 - 295
Target Start/End: Original strand, 50430418 - 50430533
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    ||||||||||   |||||||||| || |  ||||||||||||||| ||||||||||| |||||||||||| | |||||||||  ||||||||| ||| ||    
T  50430418 tacttcctccttgcctatttataagatatatttgggtcaacaaaaattgatgtatctggttaaaaattcaatccaaatacatcaacttttgttgacccaa 50430517  T
Q  280 atttctcttgtaaata 295  Q
     || ||||| ||||||    
T  50430518 cttgctcttataaata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 211 - 300
Target Start/End: Complemental strand, 25855182 - 25855093
Alignment:
Q  211 ttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaataggacc 300  Q
    ||||||| |||||||| ||||||| | |||||||||||||| |||||||||| ||||||||| ||  || |||||||  |||||||||||    
T  25855182 ttgggtctacaaaagtcgatgtatttggttaaaaattcagtccaaatacattaacttttgttgactcaactttctctcataaataggacc 25855093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 247
Target Start/End: Complemental strand, 4780425 - 4780358
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaatt 247  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||| ||||||||  |||||||||    
T  4780425 tactccctccggtcctatttataagagaaattttggtcaacaaaagttaatgtatctgattaaaaatt 4780358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 17236912 - 17236864
Alignment:
Q  186 ctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtat 234  Q
    ||||||||||||||||| || || |||||||||||||||||||||||||    
T  17236912 ctccggtcctatttataagaaaaatttgggtcaacaaaagttgatgtat 17236864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 313
Target Start/End: Original strand, 4780371 - 4780428
Alignment:
Q  256 atacattcacttttgtttacctaaatttctcttgtaaataggaccggagatagtagta 313  Q
    ||||||| ||||||||| ||| ||||||||||| |||||||||||||||  |||||||    
T  4780371 atacattaacttttgttgaccaaaatttctcttataaataggaccggagggagtagta 4780428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 310
Target Start/End: Original strand, 17236845 - 17236918
Alignment:
Q  238 gttaaaaattcagt-tcaaatacattcacttttgtttacctaaatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||||||| | ||||||||  ||||||||| ||| |||||| |||| |||||||||||||||| ||||    
T  17236845 gttaaaaattcagtctaaaatacatcaacttttgttgacccaaatttttcttataaataggaccggagagagta 17236918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 47833605 - 47833657
Alignment:
Q  174 aaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  47833605 aaataatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 47833657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 3372120 - 3372167
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  3372120 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 3372167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 3992975 - 3993022
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  3992975 atactacctccggtcctatttataagagaaatttcggtcaacaaaagt 3993022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 33551200 - 33551247
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  33551200 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 33551247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 43900548 - 43900595
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  43900548 atactccctccggtcctatttataagagaaatttaggtcaacaaaagt 43900595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 48336262 - 48336309
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  48336262 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 48336309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 20538816 - 20538770
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  20538816 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 20538770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 24704370 - 24704416
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  24704370 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 24704416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 26231576 - 26231622
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaag 225  Q
    ||||| |||||||||||||||||| ||||| ||| ||||||||||||    
T  26231576 atactacctccggtcctatttataagagaaatttaggtcaacaaaag 26231622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 53337370 - 53337416
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  53337370 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 53337416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 304
Target Start/End: Complemental strand, 1716417 - 1716307
Alignment:
Q  192 tcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgta 291  Q
    ||||||||||| ||||| ||| ||||||| |||||||||| |||| |||||||  |  | ||| ||||||  ||||||||| ||| || | |||||| ||    
T  1716417 tcctatttataagagaagtttaggtcaaccaaagttgatgcatctggttaaaa--ttggatcagatacatcaacttttgttgaccaaattatctcttata 1716320  T
Q  292 aataggaccggag 304  Q
    |||| ||||||||    
T  1716319 aataagaccggag 1716307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 31013117 - 31013036
Alignment:
Q  214 ggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaata 295  Q
    |||||||||||| |||||||||||||||| |||| |   |||||||||  ||||||||| | |||||| ||| || ||||||    
T  31013117 ggtcaacaaaagatgatgtatctagttaagaatttaaaccaaatacatctacttttgttgatctaaatgtcttttataaata 31013036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 42797721 - 42797778
Alignment:
Q  169 aagttaaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||||| | ||||| ||||||||||||| |||| ||||| ||| |||||||||||||    
T  42797721 aagttaactaatactacctccggtcctatatataagagaaatttaggtcaacaaaagt 42797778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 1716301 - 1716357
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatct 236  Q
    |||| ||||||||| |||||||| ||||   || |||||||||||||||||||||||    
T  1716301 tactccctccggtcttatttataagagataatttggtcaacaaaagttgatgtatct 1716357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 5986950 - 5987006
Alignment:
Q  254 aaatacattcacttttgtttacctaaatttctcttgtaaataggaccggagatagta 310  Q
    ||||||||  ||||||||| ||| ||| ||||||| |||||||||||||||| ||||    
T  5986950 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagagagta 5987006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 23226133 - 23226077
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatct 236  Q
    ||||||||||  |||||||||||  |||  |||||||||||||||||| ||||||||    
T  23226133 tacttcctccaatcctatttatagaagatatttgggtcaacaaaagtttatgtatct 23226077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 304
Target Start/End: Original strand, 42797816 - 42797856
Alignment:
Q  264 acttttgtttacctaaatttctcttgtaaataggaccggag 304  Q
    ||||||||| ||||||| ||||||| |||||||||||||||    
T  42797816 acttttgttgacctaaaattctcttataaataggaccggag 42797856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 44900080 - 44900136
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatct 236  Q
    |||| |||||||||||||||||| ||||  ||  ||||||||||||||||| |||||    
T  44900080 tactccctccggtcctatttataagagatattctggtcaacaaaagttgatatatct 44900136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 106; Significance: 5e-53; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 173 - 310
Target Start/End: Complemental strand, 23922 - 23785
Alignment:
Q  173 taaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtt 272  Q
    ||||| ||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23922 taaataatactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgtt 23823  T
Q  273 tacctaaatttctcttgtaaataggaccggagatagta 310  Q
     ||||||||||||||| ||||||||||||||| |||||    
T  23822 gacctaaatttctcttataaataggaccggaggtagta 23785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 23784 - 23831
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  23784 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 23831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 104; Significance: 8e-52; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 12991 - 12860
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  12991 atactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 12892  T
Q  279 aatttctcttgtaaataggaccggagatagta 310  Q
    |||||||||| ||||||||||||||| |||||    
T  12891 aatttctcttataaataggaccggaggtagta 12860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 12859 - 12906
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  12859 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 12906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 174 - 312
Target Start/End: Original strand, 6125 - 6263
Alignment:
Q  174 aaatgatacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttt 273  Q
    |||| ||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||     
T  6125 aaataatactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccacatacattcacttttgttg 6224  T
Q  274 acctaaatttctcttgtaaataggaccggagatagtagt 312  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  6225 acctaaatttctcttataaataggaccggaggtagtagt 6263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 6261 - 6215
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  6261 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 6215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 180 - 310
Target Start/End: Complemental strand, 49635 - 49505
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaa 279  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||    
T  49635 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaa 49536  T
Q  280 atttctcttgtaaataggaccggagatagta 310  Q
    ||||||||| ||||||||||||||| |||||    
T  49535 atttctcttataaataggaccggaggtagta 49505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 49504 - 49551
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagt 226  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  49504 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 49551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 192 - 303
Target Start/End: Complemental strand, 1453 - 1342
Alignment:
Q  192 tcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgta 291  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||    
T  1453 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 1354  T
Q  292 aataggaccgga 303  Q
    ||||||||||||    
T  1353 aataggaccgga 1342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 179 - 304
Target Start/End: Original strand, 231302 - 231427
Alignment:
Q  179 atacttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttaccta 278  Q
    ||||| |||||||||||||||||| |||||| || ||||||||||||||||| || |||||| |||||||||| || ||||||  ||||||||| | | |    
T  231302 atactccctccggtcctatttataggagaatattaggtcaacaaaagttgatatacctagttcaaaattcagtccagatacataaacttttgttgatcca 231401  T
Q  279 aatttctcttgtaaataggaccggag 304  Q
    | |||||||| ||| ||||| |||||    
T  231402 actttctcttataattaggatcggag 231427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 13731 - 13845
Alignment:
Q  180 tacttcctccggtcctatttatacgagaattttgggtcaacaaaagtt--gatgtatctagttaaaaattcagttcaaatacattcacttttgtttacct 277  Q
    |||| |||||||||||||||||| |||      || ||||||||||||  ||||||| ||||||||||||||||||||||| ||| | ||||||| ||||    
T  13731 tactccctccggtcctatttataagag------ggatcaacaaaagttttgatgtat-tagttaaaaattcagttcaaatatattaatttttgttgacct 13823  T
Q  278 aaatttctcttgtaaataggac 299  Q
    ||||||||||| ||| ||||||    
T  13824 aaatttctcttataagtaggac 13845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 281
Target Start/End: Complemental strand, 312845 - 312747
Alignment:
Q  183 ttcctccggtcctatttatacgagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaat 281  Q
    ||||||||||  |||||| | |||| |||| | ||||||||| ||||||||||||||| ||||||  | ||| ||||||| ||||||||| ||| ||||    
T  312845 ttcctccggttttatttaaaagagactttttgatcaacaaaaattgatgtatctagtttaaaatttggatcagatacattaacttttgttgaccaaaat 312747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 20 - 77
Alignment:
Q  215 gtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtt 272  Q
    |||||||||||||||||||| | |||||||||| ||| |||||||||  |||||||||    
T  20 gtcaacaaaagttgatgtatttggttaaaaatttagtccaaatacatcaacttttgtt 77  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 30042 - 30122
Alignment:
Q  215 gtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgtttacctaaatttctcttgtaaata 295  Q
    ||||| ||||| |||||||||||||||| |||| ||  |||||||||  |||||||||||  ||||| ||| || ||||||    
T  30042 gtcaataaaagatgatgtatctagttaagaatttagaccaaatacatctacttttgtttatttaaatgtctattataaata 30122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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