View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7504_low_48 (Length: 301)
Name: NF7504_low_48
Description: NF7504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7504_low_48 |
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Alignment Details
Target: chr1 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 28 - 283
Target Start/End: Original strand, 32836978 - 32837233
Alignment:
| Q |
28 |
cgacaaagatgagaaaaccacatggaggatatttgaccaatctaagtcagtctagaatactatgatgtctgctccataacagttgtttctttagtctgat |
127 |
Q |
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| T |
32836978 |
cgacaaagatgagaaaaccacatggaggatatttgaccaatctaagtcagtctagaatactatgatgtctgctccataacagttgtttctttagtctgat |
32837077 |
T |
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| Q |
128 |
ttttgaaaattgcattagatgaaagttctagacagtgcattagatggaagtaaattaaaatagtctagtacaacattgtctaacttagccaggtgcaatg |
227 |
Q |
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| T |
32837078 |
ttttgaaaattgcattagatgaaagttctagacagtgcattagatggaagtaaattaaaatagtctagtacaacattgtctaacttagccaggtgcaatg |
32837177 |
T |
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| Q |
228 |
ctttattgtgcatgataaaggaagttgctataaatcaattaattaagcagcatatg |
283 |
Q |
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| T |
32837178 |
ctttattgtgcatgataaaggaagttgctataaatcaatcaattaagcagcatatg |
32837233 |
T |
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