View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7504_low_55 (Length: 287)
Name: NF7504_low_55
Description: NF7504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7504_low_55 |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 13 - 272
Target Start/End: Original strand, 6974166 - 6974425
Alignment:
| Q |
13 |
aaaatttgcatccataacatgaacaccttgaaatccattcatgtgtcctcacaaaccaatcaaatacaagcccccacaaattatttttccatgcaaatat |
112 |
Q |
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| T |
6974166 |
aaaatttgcatccataacatgaacaccttgaaatccattcatgtgtcctcacaaaccaatcaaatacaagcccccacaaattatttttctatgcaaatat |
6974265 |
T |
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| Q |
113 |
tagattcatcaatcgaaaatctaataaaatcatggaagagaaggcaaagatggttgtttctttttacaacatcaaaccaacaagatttattgaataatag |
212 |
Q |
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|||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
6974266 |
tagattcatcaatccaaaatctaataaaatcatgtaagagaaggcaaagatggttatttctttttaccacatcaaaccaacaagatttattgaataatag |
6974365 |
T |
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| Q |
213 |
agcatcatggcgtattcatttggctcattttctagaatcaacaatgattcgtgtgttatc |
272 |
Q |
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||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |
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| T |
6974366 |
ggcatcatggcgtattcatttgtcaaattttctagaatcaacaatgattcgtgtgttatc |
6974425 |
T |
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