View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7504_low_79 (Length: 240)
Name: NF7504_low_79
Description: NF7504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7504_low_79 |
 | |
|
| [»] scaffold0204 (1 HSPs) |
| | |
|
| [»] scaffold0500 (1 HSPs) |
| | |
|
| [»] scaffold0289 (1 HSPs) |
| | |
|
| [»] scaffold0221 (1 HSPs) |
| | |
|
| [»] scaffold0001 (1 HSPs) |
| | |
|
| [»] scaffold0283 (1 HSPs) |
| | |
|
| [»] scaffold1248 (1 HSPs) |
| | |
|
| [»] scaffold0952 (1 HSPs) |
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|
| [»] scaffold0069 (1 HSPs) |
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|
Alignment Details
Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 35)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 2799696 - 2799638
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgga |
78 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2799696 |
tcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatctattacggaacgga |
2799638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 33402583 - 33402652
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||| ||||||||| |
|
|
| T |
33402583 |
aatatgatcaaagtaagttaggtcaaaattacacatttttaaacagatcatctattacgggacggaggga |
33402652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 2805862 - 2805806
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacg |
76 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
2805862 |
tcaaagtaaattaggtcaaaattgcacattttcaaatgggtcatctattacggaacg |
2805806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 32110671 - 32110733
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
32110671 |
tcaaagtaaattagatcaaaattgcacattttcaaatggattatctattgcggaacggaggga |
32110733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 14057780 - 14057711
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||| |||||| |||| ||| ||||||||| |
|
|
| T |
14057780 |
aatatgatcaaagtaagttaggtcaaaattgcatattttcaaacagatcatttattgcgggacggaggga |
14057711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 20040407 - 20040476
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| | |||| |||||||| ||||||||| |
|
|
| T |
20040407 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggaggga |
20040476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 30788277 - 30788208
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||||||| ||||||||| ||||||||||||||| |||| |||||||| ||||||||| |
|
|
| T |
30788277 |
aatatggtcaaagtaagttatgtcaaaattacacattttcaaatgggtcatatattacgggacggaggga |
30788208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 1098247 - 1098178
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
1098247 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga |
1098178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 8627207 - 8627142
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgga |
78 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||||||| | ||||||||| ||| ||||| |
|
|
| T |
8627207 |
aatatggtcaaagtaagttagatcaaaattgcacattttcaaataggtcatctattgcgggacgga |
8627142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 14633079 - 14633010
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |||||| |||| | | ||||||||| |
|
|
| T |
14633079 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcaggacggaggga |
14633010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 34347539 - 34347474
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgga |
78 |
Q |
| |
|
|||||| ||||||||||||| ||||||||| ||||||||||||| | ||||||||| ||||||||| |
|
|
| T |
34347539 |
aatatggtcaaagtaagttatgtcaaaattacacattttcaaataggtcatctattgcggaacgga |
34347474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 39925275 - 39925206
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||| || |||||||||| || |||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
39925275 |
aatatggtcaaagtaaatttggtcaaaattacaaattttcaaatggatcatctattgcgggacggaggga |
39925206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 13548285 - 13548243
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
13548285 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa |
13548243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 20022932 - 20022890
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
20022932 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa |
20022890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 1781137 - 1781206
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
1781137 |
aatatggtcaaagtaacttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga |
1781206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 20503040 - 20503109
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| || |||||||||||||||||||| |||||||| ||||||| |||| ||| ||| ||||||||| |
|
|
| T |
20503040 |
aatatggtctaagtaagttaggtcaaaattacacatttttaaatggaccatcaatttcgggacggaggga |
20503109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 27675612 - 27675543
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||||||||| |||| |||| ||| ||||||||| |
|
|
| T |
27675612 |
aatatgatcaaagtaagctaggtcaaaattgcaaattttcaaataagtcatttattgcgggacggaggga |
27675543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 2551619 - 2551674
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||||| | ||| |||||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
2551619 |
aatatggttaaaataagttaggtcaaaattgcacatttttaaatgggtcatctatt |
2551674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 28143000 - 28142945
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||||| ||||||||| |||| | |||||||||||||||||||||||| ||||||| |
|
|
| T |
28143000 |
aatatggtcaaagtaaattagattaaaattgcacattttcaaatggattatctatt |
28142945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 30721677 - 30721720
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaat |
56 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
30721677 |
aatatggtcaaaataagttaggtcaaaattgcacattttcaaat |
30721720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 19344691 - 19344733
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
19344691 |
aatatggtcaaaataagttaggtcaaaattgcacattttcaaa |
19344733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 31191169 - 31191211
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
31191169 |
aatatggtcaaagtaaattaggtcaaaattgcacattttcaaa |
31191211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 41263121 - 41263159
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacatttt |
51 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
41263121 |
aatatggtcaaagtaagttaggtcaaaattgcacatttt |
41263159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 14140007 - 14139938
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||| |||||||| | ||||||||||| ||| || |||||| |
|
|
| T |
14140007 |
aatatgatcaaagtaaactagatcaaaattgcaaattttcaattagatcatctattgcgggacagaggga |
14139938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 34169901 - 34169832
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||| ||| ||||||||||| |||||||||| ||||||||||| ||| ||| ||||| |
|
|
| T |
34169901 |
aatatggtcaaagtaaactagatcaaaattgcaaattttcaaatagatcatctattgcgggacgaaggga |
34169832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 40316890 - 40316821
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| || |||||| |||||||||||||||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
40316890 |
aatatggtcgaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga |
40316821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 41410651 - 41410720
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| || |||||| |||||||||||||||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
41410651 |
aatatggtcgaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga |
41410720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 967255 - 967220
Alignment:
| Q |
22 |
aaagtaagttaggtcaaaattgcacattttcaaatg |
57 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| |
|
|
| T |
967255 |
aaagtaagttaggtcaaaattgcaaattttcaaatg |
967220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 32474014 - 32474069
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||||| ||||| ||||||| || |||||| ||||||||||||||| ||||||||| |
|
|
| T |
32474014 |
aatatggtcaaaataagttatgttaaaattacacattttcaaatgggtcatctatt |
32474069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 40080053 - 40079998
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||||| |||||||||||||||| ||||||| | |||||||||| | ||||||||| |
|
|
| T |
40080053 |
aatatggtcaaagtaagttaggttaaaattgtaaattttcaaataggtcatctatt |
40079998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 14607549 - 14607591
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| ||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
14607549 |
aatatggtcaaattaaattaggtcaaaattgcacattttcaaa |
14607591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 30211733 - 30211771
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacatttt |
51 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
30211733 |
aatatggtcaaagtaagttagatcaaaattgcacatttt |
30211771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 1831423 - 1831354
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| || |||||| ||| |||||||||||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
1831423 |
aatatggtcgaagtaaattatgtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga |
1831354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 9936880 - 9936949
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||| ||| |||| ||||||||||||||||| |||| ||||| |||| ||| ||||||||| |
|
|
| T |
9936880 |
aatatggtcaaaataaattagatcaaaattgcacatttttaaatatatcatttattgcgggacggaggga |
9936949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 10465287 - 10465356
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||| |||||||||||| | |||||||||| | ||||||||| ||| | ||||||| |
|
|
| T |
10465287 |
aatatggtcaaagtaagataggtcaaaattataaattttcaaataggtcatctattgcgggagggaggga |
10465356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 43)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 18013457 - 18013526
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
18013457 |
aatatgatcaaagtaaattatgtcaaaattgcacattttcaaatgggtcatctattacgggacggaggga |
18013526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 901075 - 901144
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||| ||||||||| |
|
|
| T |
901075 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggaggga |
901144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 29720467 - 29720398
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| |||||| |||| ||| ||||||||| |
|
|
| T |
29720467 |
aataggatcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggaggga |
29720398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 36594406 - 36594458
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatct |
65 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
36594406 |
aatatgatcaaaataagttaggtcaaaattacacattttcaaatggatcatct |
36594458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 42098614 - 42098689
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagggattaact |
88 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| | |||| |||| ||| ||||||||| ||||| |
|
|
| T |
42098614 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagtaact |
42098689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 53274982 - 53275057
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagggattaact |
88 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||| | |||| |||| ||| ||||| ||| ||||| |
|
|
| T |
53274982 |
aatatgatcaaaataagttaggtcaaaattgcacattttcaaataggtcatttattgcgggacggaaggagtaact |
53275057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 34669680 - 34669638
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34669680 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
34669638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 1334282 - 1334351
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| | ||| |||||||| |||||||| ||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
1334282 |
aatatggtaaaattaagttagatcaaaattacacattttcaaatgggtcatctattgcggaacggaggga |
1334351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 9484668 - 9484599
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
9484668 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga |
9484599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 29455695 - 29455764
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| | |||| |||||| | ||||||||| |
|
|
| T |
29455695 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacaggacggaggga |
29455764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 29793365 - 29793434
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
29793365 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga |
29793434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 48927789 - 48927858
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||||||||| |||||| |||| ||| ||||||||| |
|
|
| T |
48927789 |
aatatggtcaaagtaagttaggtaaaaattgcacattttcaaacagatcatttattgcgggacggaggga |
48927858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 49076413 - 49076482
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
49076413 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga |
49076482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 50673749 - 50673680
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||||||||||||| | |||| |||| ||||||||||||| |
|
|
| T |
50673749 |
aatatggtcaaagtaagttaagtcaaaattgcacattttcaaacaggtcatttattgcggaacggaggga |
50673680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 52094081 - 52094148
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg |
80 |
Q |
| |
|
|||||| ||||| |||||||| ||||||||||| ||||||||||| ||||||||| ||||||||||| |
|
|
| T |
52094081 |
aatatggtcaaattaagttagatcaaaattgcaaattttcaaatgagtcatctattgcggaacggagg |
52094148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 12948112 - 12948070
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
12948112 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa |
12948070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 47340071 - 47340133
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaac |
75 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||||| ||||||||| |||| |||| |||||| |
|
|
| T |
47340071 |
aatatgatcaaagtaaattagatcaaaattgcacatcttcaaatgggtcatatattgcggaac |
47340133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 2643256 - 2643325
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||| |||||||||| | ||||||||| ||| ||||||||| |
|
|
| T |
2643256 |
aatatggtcaaagtaaactaggtcaaaattgcaaattttcaaataggtcatctattgcgggacggaggga |
2643325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 3804512 - 3804451
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaa |
74 |
Q |
| |
|
|||||||||||||||| |||| ||||||||| |||||||||||||| |||| |||| ||||| |
|
|
| T |
3804512 |
aatatgatcaaagtaaattagatcaaaattgtacattttcaaatgggtcatgtattgcggaa |
3804451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 4464953 - 4464884
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||||||||||||| ||||| || |||||| |||||||||| ||||||||||| ||| ||||||||| |
|
|
| T |
4464953 |
aatatgatcaaagtaaactaggttaacattgcaaattttcaaatagatcatctattgcgggacggaggga |
4464884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 16434844 - 16434913
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
16434844 |
aatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga |
16434913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 28958986 - 28959055
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||| ||||| |||| ||||||||||| || ||||||||| |
|
|
| T |
28958986 |
aatatggtcaaagtaagctaggtcaaaattgcaaatttttaaatagatcatctattgcgagacggaggga |
28959055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 34263691 - 34263760
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| ||| | |||| |||| ||| ||||||||| |
|
|
| T |
34263691 |
aatatggtcaaagtaagttaggtcaaaattgcacatttttaaacaggtcatttattgcgggacggaggga |
34263760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 43370363 - 43370310
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatcta |
66 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||||||| | ||||||| |
|
|
| T |
43370363 |
aatacgatcaaagtaagttatgtcaaaattgcacattttcaaataggtcatcta |
43370310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 44781979 - 44782039
Alignment:
| Q |
22 |
aaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||| | ||||||||| ||| ||||||||| |
|
|
| T |
44781979 |
aaagtaagttagttcaaaattgcaaattttcaaataggtcatctattgcgggacggaggga |
44782039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 1778433 - 1778366
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg |
80 |
Q |
| |
|
|||||| |||||||||| || |||||||||||| |||||||||| | ||||||||| ||| ||||||| |
|
|
| T |
1778433 |
aatatggtcaaagtaagctaagtcaaaattgcaaattttcaaataggtcatctattgcgggacggagg |
1778366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 4229175 - 4229218
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaat |
56 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
4229175 |
aatatgatcaaagtaagctaggtcaaaattgcaaattttcaaat |
4229218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 32961318 - 32961263
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||| ||||| |||||| ||||||||| |
|
|
| T |
32961318 |
aatatggtcaaactaagttaggtcaaaattgcaaatttttaaatgggtcatctatt |
32961263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 14751040 - 14751098
Alignment:
| Q |
24 |
agtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | ||||||||| ||| | ||||||| |
|
|
| T |
14751040 |
agtaagttaggtcaaaattgcacattttcaaacaggtcatctattgcgggagggaggga |
14751098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 34555223 - 34555181
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
34555223 |
aatatggtcaaagtaagttaggtcaaaaatgcacattttcaaa |
34555181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 36179123 - 36179165
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
36179123 |
aatatgatcaaagtaaattaagtcaaaattgcacattttcaaa |
36179165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 49818829 - 49818755
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagggattaac |
87 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||| |||||||| | |||||||||| ||| ||| ||||| |||| |
|
|
| T |
49818829 |
aatatggtcaaagtaaattaggtcaaaattgcaaattttcaactaaatcatctattgcgggacgaagggaataac |
49818755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 29809417 - 29809348
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| || ||||||| ||| ||||||||||| |||||||||| | ||||||||| ||| ||||||||| |
|
|
| T |
29809417 |
aatatggtcgaagtaagctagatcaaaattgcaaattttcaaataggtcatctattgcgggacggaggga |
29809348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 26759551 - 26759495
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatta |
69 |
Q |
| |
|
|||||| ||||||||||||||||||||||| || ||||| |||| |||||| ||||| |
|
|
| T |
26759551 |
aatatggtcaaagtaagttaggtcaaaattacaaatttttaaatagatcatttatta |
26759495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 43170064 - 43170000
Alignment:
| Q |
15 |
tatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggag |
79 |
Q |
| |
|
|||| ||||||||||||| |||||||||| | ||||| ||| |||||||||||| ||||| |||| |
|
|
| T |
43170064 |
tatggtcaaagtaagttaagtcaaaattgtatatttttaaacggatcatctattgcggaatggag |
43170000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 46818383 - 46818431
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
||||||||| |||| ||||||||| ||||||| |||||||||||||||| |
|
|
| T |
46818383 |
tcaaagtaaattagatcaaaattgtacatttttaaatggatcatctatt |
46818431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 4945838 - 4945881
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaat |
56 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
4945838 |
aatatggtcaaagtaagttaggtcaaaattgcaaattctcaaat |
4945881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 38878465 - 38878532
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg |
80 |
Q |
| |
|
|||||| ||||| ||| ||| |||||||||||||||||||||| | |||| |||||||| ||||||| |
|
|
| T |
38878465 |
aatatggtcaaaataatttatgtcaaaattgcacattttcaaacaggtcatttattacgggacggagg |
38878532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 1325534 - 1325576
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
1325534 |
aatataatcaaagtaagttaggttaaaattgcaaattttcaaa |
1325576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 38833952 - 38833990
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacatttt |
51 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
38833952 |
aatatggtcaaagtaagttaggtcaaaattacacatttt |
38833990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 46866407 - 46866373
Alignment:
| Q |
21 |
caaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |
|
|
| T |
46866407 |
caaaataagttaggtcaaaattgcacattttcaaa |
46866373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 47069471 - 47069409
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||||| ||||||||||||||| | ||||||||||| ||||||||| || ||||||||| |
|
|
| T |
47069471 |
tcaaagtaggttaggtcaaaattgaaaattttcaaatgtgtcatctattgtgggacggaggga |
47069409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 29588445 - 29588400
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatgg |
58 |
Q |
| |
|
|||||| |||||||||||||||||||||||| | ||||| |||||| |
|
|
| T |
29588445 |
aatatggtcaaagtaagttaggtcaaaattgtatattttgaaatgg |
29588400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 24)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 8896343 - 8896274
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |
|
|
| T |
8896343 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatctattgcggaatggaggga |
8896274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 16126073 - 16126139
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggag |
79 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||| |||| |||| ||| |||||| |
|
|
| T |
16126073 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatttattgcgggacggag |
16126139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 16333552 - 16333486
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggag |
79 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||| |||| |||| ||| |||||| |
|
|
| T |
16333552 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatttattgcgggacggag |
16333486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 16127771 - 16127840
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
16127771 |
aatatgatcaaagtaagttaggtcaaaattacacattttcaaataggtcatttattgcgggacggaggga |
16127840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 7724602 - 7724671
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
7724602 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga |
7724671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 8373506 - 8373437
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |||||| |||| ||| || |||||| |
|
|
| T |
8373506 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacagaggga |
8373437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 41575634 - 41575565
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
41575634 |
aatatgatcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgggacggaggga |
41575565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 11277623 - 11277580
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaat |
56 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
11277623 |
aatatgatcaaagtaagttatgtcaaaattgcacattttcaaat |
11277580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 12209061 - 12208994
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg |
80 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| | |||| |||| ||| ||||||| |
|
|
| T |
12209061 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg |
12208994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 43328792 - 43328847
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||||| |||||||||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
43328792 |
aatatggtcaaagtaagttagatcaaaattatacattttcaaatggatcatctatt |
43328847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 2831779 - 2831729
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcat |
63 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
2831779 |
aatatggtcaaagtaagttaggtcaaaattacacatttttaaatggatcat |
2831729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 22718534 - 22718592
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacg |
71 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||| |||||||||| |||||| ||||||| |
|
|
| T |
22718534 |
aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaatagatcatttattacg |
22718592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 38963867 - 38963825
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
38963867 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa |
38963825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 10333569 - 10333638
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| |||||||||||| |||||| ||||||| ||||||||| |
|
|
| T |
10333569 |
aatatggtcaaaataagttaggtcaaaattacacattttcaaacagatcatttattacgagacggaggga |
10333638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 44022333 - 44022285
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| | |||||||||| |
|
|
| T |
44022333 |
tcaaagtaagttaggttaaaattgcacattttcaaacgaatcatctatt |
44022285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 18504544 - 18504477
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg |
80 |
Q |
| |
|
|||||| ||||| ||||||| ||||||||| ||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
18504544 |
aatatggtcaaaataagttacgtcaaaattacacattttcaaataagtcatctattacgggacggagg |
18504477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 31603414 - 31603449
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
31603414 |
tcaaagtaagttaggtcaaaattgcacattttcaaa |
31603449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 40471808 - 40471766
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
40471808 |
aatatgatcaaaataagttaagtcaaaattgcacattttcaaa |
40471766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 41436904 - 41436835
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||||||||||| |||| |||||||| ||||||||| |
|
|
| T |
41436904 |
aatatggtcaaagtaagttaggtcaaaattatacattttcaaacatttcatttattacgggacggaggga |
41436835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 5096320 - 5096278
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||||||||| ||||||| |||||||||| ||||||||||| |
|
|
| T |
5096320 |
aatatgatcaaaataagttatgtcaaaattgtacattttcaaa |
5096278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 15177441 - 15177383
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacg |
71 |
Q |
| |
|
|||||| ||||||||||||| | ||||||| |||||||||||| | |||||||||||| |
|
|
| T |
15177441 |
aatatggtcaaagtaagttaaattaaaattgtacattttcaaataggtcatctattacg |
15177383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 37987927 - 37987969
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||||||||||||| |||| |||||||||| |||||||||| |
|
|
| T |
37987927 |
aatatgatcaaagtaacttagatcaaaattgcgcattttcaaa |
37987969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 6730094 - 6730163
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||| ||||| ||||||||||||||| |||||||| | | ||||||||| || ||||||||| |
|
|
| T |
6730094 |
aatatggtcaatgtaagctaggtcaaaattgcaaattttcaagtaggtcatctattgcgagacggaggga |
6730163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 37316947 - 37316879
Alignment:
| Q |
14 |
atatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
||||| ||||||||| |||||||||||||| |||||||||| | ||||| ||| ||| ||||||||| |
|
|
| T |
37316947 |
atatggtcaaagtaaaccaggtcaaaattgcaaattttcaaataggtcatcgattgcgggacggaggga |
37316879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 31)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 29821122 - 29821063
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacgg |
72 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29821122 |
aatatggtcaaagtaagttagatcaaaattgcacattttcaaatggatcatctattacgg |
29821063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 43447237 - 43447168
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||| |
|
|
| T |
43447237 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattacgggacggaggga |
43447168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 48336419 - 48336488
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||| |
|
|
| T |
48336419 |
aatacgatcaaagtaagttaggtcaaaattgcacattttcaaatgtgtcatctattgcgggacggaggga |
48336488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 3708325 - 3708256
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||| |||| || ||||||||| |
|
|
| T |
3708325 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgtgggacggaggga |
3708256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 40411600 - 40411669
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| | |||| |||||||| ||||||||| |
|
|
| T |
40411600 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggaggga |
40411669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 42185346 - 42185277
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||| ||| |||||||||||||||| |||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
42185346 |
aatatggtcaaactaaattaggtcaaaattgcaaattttcaaatggatcatctattgcgggacggaggga |
42185277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 8525407 - 8525483
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagggattaactt |
89 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||| | |||| ||||| || ||||||||| |||||| |
|
|
| T |
8525407 |
aatatgatcaaagtaagttaggtcaaaattgcatattttcaaacaggtcatttattatgggacggagggagtaactt |
8525483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 1613209 - 1613275
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggag |
79 |
Q |
| |
|
|||||| ||||||||| ||||||||||||| ||||||||||||| | ||||||||||||| |||||| |
|
|
| T |
1613209 |
aatatggtcaaagtaaattaggtcaaaattacacattttcaaataggtcatctattacgggacggag |
1613275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 33394149 - 33394094
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| |||||| ||| ||||| |
|
|
| T |
33394149 |
aatatggtcaaagtaagttaggtcaaaattgcacatttttaaatgggtcacctatt |
33394094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 53987771 - 53987826
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||||| |||||||||||||||| || |||||||||||| |||||||||||||||| |
|
|
| T |
53987771 |
aatatggtcaaagtaagttaggttaatattgcacatttttaaatggatcatctatt |
53987826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 31152733 - 31152691
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
31152733 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa |
31152691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 10384920 - 10384851
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| | |||||||||||||||||||||||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
10384920 |
aatatggttaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga |
10384851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 37164081 - 37164032
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatta |
69 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||||| |||||||||| |
|
|
| T |
37164081 |
tcaaagtaagttaggtcaaaattgtatattttcaaatgggtcatctatta |
37164032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 37667765 - 37667834
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
37667765 |
aatatggtcaaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga |
37667834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 39332821 - 39332890
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||| |||||| |||| || ||||||||| |
|
|
| T |
39332821 |
aatatggtcaaagtaagttagttcaaaattgcacattttcaaacagatcatttattgcgtgacggaggga |
39332890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 55631866 - 55631935
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
55631866 |
aatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga |
55631935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 1981373 - 1981428
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||||| |||||||||||||| |||||||| || ||||||||||||||| |||||| |
|
|
| T |
1981373 |
aatatggtcaaagtaagttagatcaaaattacaaattttcaaatggatcgtctatt |
1981428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 23605893 - 23605948
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
||||||||||||||||| ||||||||||||| | |||||||||| |||||| |||| |
|
|
| T |
23605893 |
aatatgatcaaagtaagctaggtcaaaattgtaaattttcaaatagatcatttatt |
23605948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 39171030 - 39170963
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg |
80 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||||||||| | |||| |||| ||| ||||||| |
|
|
| T |
39171030 |
aatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg |
39170963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 46608285 - 46608218
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg |
80 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||||||||||| | |||| |||| ||| ||||||| |
|
|
| T |
46608285 |
aatatggtcaaagtaagttaggtcaaaatttcacattttcaaacaggtcatttattgcgggacggagg |
46608218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 47834135 - 47834202
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg |
80 |
Q |
| |
|
|||||| ||||||||||||| ||||||||| |||||||||||||| ||||| ||| ||| ||||||| |
|
|
| T |
47834135 |
aatatggtcaaagtaagttatgtcaaaattacacattttcaaatgtgtcatccattccgggacggagg |
47834202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 50684992 - 50684937
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||||| |||| ||| ||||||| |
|
|
| T |
50684992 |
aatatgatcaaagtaagttagatcaaaattgcatatttttaaatagattatctatt |
50684937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 43047459 - 43047417
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
43047459 |
aatatggtcaaagtaagttaggttaaaattgcacattttcaaa |
43047417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 48380545 - 48380503
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
48380545 |
aatatggtcaaagtaagttaggtcaaaaatgcacattttcaaa |
48380503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 31657347 - 31657416
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||| ||||| |||| | |||| |||| ||| ||||||||| |
|
|
| T |
31657347 |
aatatggtcaaagtaagctaggtcaaaattgcaaatttttaaataggtcatttattgcgggacggaggga |
31657416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 28899063 - 28899131
Alignment:
| Q |
14 |
atatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
||||| ||||||||| ||||||||||||||| |||||||||| | ||||||||| ||| || |||||| |
|
|
| T |
28899063 |
atatggtcaaagtaaactaggtcaaaattgcaaattttcaaataggtcatctattgcgggacagaggga |
28899131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 1377575 - 1377532
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaat |
56 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
1377575 |
aatatggtcaaagtaagataggtcaaaattgcaaattttcaaat |
1377532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 6520500 - 6520442
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgga |
78 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||||||| | |||| |||| ||| ||||| |
|
|
| T |
6520500 |
tcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgggacgga |
6520442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 24334373 - 24334427
Alignment:
| Q |
14 |
atatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
||||| ||||||||| ||||||||||||||| |||||||||| | ||||||||| |
|
|
| T |
24334373 |
atatggtcaaagtaaactaggtcaaaattgcaaattttcaaataggtcatctatt |
24334427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 28914440 - 28914371
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||||||||||| | ||||| ||| | | || |||| ||||||||||||| |
|
|
| T |
28914440 |
aatatggtcaaagtaagttaggtcaaaattgtaaattttgaaacagtttatttattgcggaacggaggga |
28914371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 52818683 - 52818731
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
||||||||| |||||| |||||| |||||||||||||| ||||||||| |
|
|
| T |
52818683 |
tcaaagtaaattaggttaaaattacacattttcaaatgagtcatctatt |
52818731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 32)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 38786942 - 38787005
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacg |
76 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
38786942 |
aatatgatcaaagtaagttatatcaaaattgcatattttcaaatggatcatctattacggaacg |
38787005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 40883483 - 40883428
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
40883483 |
aatatgatcaaagtaagttaggtcaaaatttcacatttttaaatggatcatctatt |
40883428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 49903681 - 49903743
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaac |
75 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||| |||||||||||||||| |||||| |
|
|
| T |
49903681 |
aatatgatcaaagtaaattaggtcaaaatttcacatttttaaatggatcatctattgcggaac |
49903743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 10648197 - 10648255
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacg |
71 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
10648197 |
aatatggtcaaaataagttaggtcaaaattacacattttcaaatagatcatctattacg |
10648255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 1821624 - 1821693
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| | |||||||| | | ||||||||| |
|
|
| T |
1821624 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaataggccatctattgccggacggaggga |
1821693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 12685894 - 12685963
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||||||||| ||| |||| ||||||||||||||||||||| || ||||||||||||| ||| ||||| |
|
|
| T |
12685894 |
aatatgatcaaaataaattagatcaaaattgcacattttcaaacgggtcatctattacgggacgaaggga |
12685963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 29253551 - 29253486
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgga |
78 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||| |||||||||| ||||||||||| ||| ||||| |
|
|
| T |
29253551 |
aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaatagatcatctattgcgggacgga |
29253486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 31932174 - 31932243
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||| |||||||||| ||||||||||| ||| ||||||||| |
|
|
| T |
31932174 |
aatatggtcaaagtaaactaggtcaaaattgcaaattttcaaatagatcatctattgcgggacggaggga |
31932243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 41855717 - 41855786
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||| |||||||||| | |||| |||||||| ||||||||| |
|
|
| T |
41855717 |
aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattacgggacggaggga |
41855786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 44452267 - 44452198
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||||||||||||||| |||||||| ||| || |||||| |
|
|
| T |
44452267 |
aatatggtcaaagtaagttaggtcaaaattacacattttcaaatgggacatctattgcgggacagaggga |
44452198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 45299390 - 45299321
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
45299390 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga |
45299321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 6017445 - 6017512
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg |
80 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||| |||||| |||| ||| ||||||| |
|
|
| T |
6017445 |
aatatggtcaaagtaagttagatcaaaattgcacattttcaaacagatcatttattgcgggacggagg |
6017512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 10100509 - 10100551
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
10100509 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa |
10100551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 10124181 - 10124139
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
10124181 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa |
10124139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 26543940 - 26543874
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggag |
79 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||||||||| |||||| |||| ||| |||||| |
|
|
| T |
26543940 |
aatatggtcaaagtaagttaggtcaaaattgtacattttcaaacagatcatttattgcgggacggag |
26543874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 8251145 - 8251214
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
8251145 |
aatatggtcaaagtaagttagatcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga |
8251214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 52688594 - 52688547
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
52688594 |
tcaaagtaagttaggtcaaaattccacattttcaaat-gatcatctatt |
52688547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 2126724 - 2126655
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||| ||||||||||||| |||||||| |||| ||||||||| ||||| ||||||| |
|
|
| T |
2126724 |
aatatggtcaaagtaaattaggtcaaaattacacatttttaaataagtcatctattgcggaatggaggga |
2126655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 5606387 - 5606456
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| | |||||||||||| |||||||||||| ||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
5606387 |
aatatggttaaagtaagttagatcaaaattgcactttttcaaataggtcatttattgcgggacggaggga |
5606456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 8048744 - 8048813
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||| |||| ||||||||||||||| |||||||||| | ||||||||| | | ||||||||| |
|
|
| T |
8048744 |
aatatggtcaaaataagctaggtcaaaattgcaaattttcaaataggtcatctattgcaggacggaggga |
8048813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 28490232 - 28490163
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||| || |||||||||||| |||||||||| | ||||||||| ||| ||||||||| |
|
|
| T |
28490232 |
aatatggtcaaagtaaactatgtcaaaattgcaaattttcaaataggtcatctattgcgggacggaggga |
28490163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 41414275 - 41414206
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||| |||||||||| | | ||||||| | | ||||||||| |
|
|
| T |
41414275 |
aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtaatctattgcaggacggaggga |
41414206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 44240591 - 44240522
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||| ||||| |||| | |||| |||| ||| ||||||||| |
|
|
| T |
44240591 |
aatatggtcaaagtaagctaggtcaaaattgcaaatttttaaataggtcatttattgcgggacggaggga |
44240522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 48312100 - 48312032
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||| ||||||| ||||||| | ||||||||||||||||||||||| ||||||||| ||| || |||||| |
|
|
| T |
48312100 |
aatacgatcaaaataagttaagccaaaattgcacattttcaaatgg-tcatctattgcgggactgaggga |
48312032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 50014557 - 50014626
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||| ||| ||||||||||| |||||||||| |||||||| |||| ||||||||| |
|
|
| T |
50014557 |
aatatggtcaaagtaagctagatcaaaattgcaaattttcaaataagtcatctatgacgggacggaggga |
50014626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 52749353 - 52749284
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||| |||||||||| ||||||||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
52749353 |
aatatggtcaaaataagttaggtaaaaattgcacattttcaaacaggtcatttattgcgggacggaggga |
52749284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 27581065 - 27581121
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatta |
69 |
Q |
| |
|
||||||||||||||| |||||||||||||| || ||| |||||| ||||||||||| |
|
|
| T |
27581065 |
aatatgatcaaagtatgttaggtcaaaattacatattgtcaaataaatcatctatta |
27581121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 3138676 - 3138618
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacgg |
72 |
Q |
| |
|
|||||| ||||||||||||| ||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
3138676 |
aatatggtcaaagtaagttatgtcaaaaacacacattttcaaatgg-tcatctattacgg |
3138618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 48389138 - 48389095
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaat |
56 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
48389138 |
aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaat |
48389095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 7075326 - 7075368
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||| |||||||| |
|
|
| T |
7075326 |
aatatggtcaaagtaagttagatcaaaattgcacgttttcaaa |
7075368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 43453161 - 43453230
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| ||||| | |||||| ||||||| | ||| ||||||||| |
|
|
| T |
43453161 |
aatatggtcaaaataagttaggtcaaaattacacatctgcaaatgagtcatctaatgcgggacggaggga |
43453230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 33730190 - 33730234
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatg |
57 |
Q |
| |
|
|||||| | ||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
33730190 |
aatatggttaaagtaagttatgtcaaaattacacattttcaaatg |
33730234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0204 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0204
Description:
Target: scaffold0204; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 23941 - 24010
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||| |
|
|
| T |
23941 |
aatacgatcaaagtaagttaggtcaaaattgcacattttcaaatgtgtcatctattgcgggacggaggga |
24010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 50; Significance: 9e-20; HSPs: 32)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 44717368 - 44717299
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||| ||| ||||||||| |
|
|
| T |
44717368 |
aatatgatcaaagtaagttagttcaaaattacacattttcaaatggatcatccattgcgggacggaggga |
44717299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 3466349 - 3466286
Alignment:
| Q |
19 |
atcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||| ||||||||| ||| ||||||||| |
|
|
| T |
3466349 |
atcaaagtaagttaggtcaaaattgcgcattttcaaatgggtcatctattgcgggacggaggga |
3466286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 8496875 - 8496941
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggag |
79 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||| | |||||| |
|
|
| T |
8496875 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcaactattacaggacggag |
8496941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 4960223 - 4960158
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgga |
78 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||| |||||||||| ||||||||||||||| ||||| |
|
|
| T |
4960223 |
aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaatagatcatctattacgggacgga |
4960158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 20671328 - 20671259
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| || ||||||||| |
|
|
| T |
20671328 |
aatatggtcaaagtaagttaggtcaaaattacacattttcaaattgatcatctattgcgcgacggaggga |
20671259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 40645681 - 40645612
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||||||||||| |||||||| ||| ||||||||| |
|
|
| T |
40645681 |
aatatgatcaaagtaagttaggtcaaaattgaaaattttcaaatgggccatctattgcgggacggaggga |
40645612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 17523877 - 17523822
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |
|
|
| T |
17523877 |
aatatgatcaaagtaagttaggttaaaactgcacattttcaaatgggtcatctatt |
17523822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 11756848 - 11756779
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |||||||||| ||||||||| |||||| |||||| |
|
|
| T |
11756848 |
aatatggtcaaagtaagttaggtcaaaattgcaaattttcaaataagtcatctattgcggaacagaggga |
11756779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 28583292 - 28583361
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||||||||| | ||||||||| ||| ||||||||| |
|
|
| T |
28583292 |
aatatgctcaaagtaaattaggtcaaaattgcacattttcaaaaaggtcatctattgcgggacggaggga |
28583361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 44887704 - 44887773
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||| ||||| ||||||||||||||||||||||||| |||||| |||| ||| ||||||||| |
|
|
| T |
44887704 |
aatatggtcaaactaagtcaggtcaaaattgcacattttcaaatagatcatttattgcgggacggaggga |
44887773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 8123714 - 8123658
Alignment:
| Q |
26 |
taagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||||||||||| | ||||||||||| |
|
|
| T |
8123714 |
taagttaggtcaaaattacacatttttaaatggatcatctattgcagaacggaggga |
8123658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 30464504 - 30464428
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagggattaactt |
89 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||| |||||| |
|
|
| T |
30464504 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagggagtaactt |
30464428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 4327108 - 4327150
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
4327108 |
aatatgatcaaagtaagttagatcaaaattgcacattttcaaa |
4327150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 14378682 - 14378744
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| |||| ||| ||||||||| |
|
|
| T |
14378682 |
tcaaagtaagttaggtcaaaattgcacattttcaaacctatcatttattgcgggacggaggga |
14378744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 25691586 - 25691628
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
25691586 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa |
25691628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 14584196 - 14584265
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
||||||||||||||||| ||| |||||||| | |||||||||| |||||||||||| || ||||||||| |
|
|
| T |
14584196 |
aatatgatcaaagtaagctagatcaaaattataaattttcaaatagatcatctattatgggacggaggga |
14584265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 44947089 - 44947021
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
||||| |||||||||| ||||||||||||||||||||| |||||| ||||||||| ||| ||||||||| |
|
|
| T |
44947089 |
aatataatcaaagtaaaataggtcaaaattgcacatttttaaatgggtcatctattgcgg-acggaggga |
44947021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 38842235 - 38842167
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcaca-ttttcaaatggatcatctattacggaacggagg |
80 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| |||||||| | |||| |||||||| ||||||| |
|
|
| T |
38842235 |
aatatgatcaaagtaagttaggtcaaaattacacatttttcaaacaggtcatttattacgggacggagg |
38842167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 25009216 - 25009161
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
25009216 |
aatatggtcaaagtaaattaggtcaaaattgcacattttcaaacagatcatttatt |
25009161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 29917917 - 29917971
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
29917917 |
aatatggtcaaaataagttaggtcaaaattacacatttt-aaatggatcatctatt |
29917971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 37094204 - 37094137
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg |
80 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||| |||||||||| | |||| |||| ||| ||||||| |
|
|
| T |
37094204 |
aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgggacggagg |
37094137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 40035359 - 40035304
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||||||| ||| ||| |||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
40035359 |
aatatgattaaactaaattagatcaaaattgcaaattttcaaatggatcatctatt |
40035304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 44039897 - 44039842
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||||||||||| |||| || ||||||||||||||||||||||||||||| |||| |
|
|
| T |
44039897 |
aatatgatcaaactaagccagatcaaaattgcacattttcaaatggatcatttatt |
44039842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 66992 - 66942
Alignment:
| Q |
19 |
atcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatta |
69 |
Q |
| |
|
|||||| ||| ||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
66992 |
atcaaaataaattatgtcaaaattacacattttcaaatggatcatctatta |
66942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 21132917 - 21132959
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
21132917 |
aatatggtcaaagtaagttaagtcaaaattgcacattttcaaa |
21132959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 23437802 - 23437871
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||| || |||||||||||||||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
23437802 |
aatatggtcaaagcaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga |
23437871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 30653432 - 30653367
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgga |
78 |
Q |
| |
|
|||||| |||||||||||||| | ||||||||||||||| |||| | |||||||||||| ||||| |
|
|
| T |
30653432 |
aatatggtcaaagtaagttagattaaaattgcacatttttaaattgggcatctattacgggacgga |
30653367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 761622 - 761546
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagggattaactt |
89 |
Q |
| |
|
|||||| ||||||||| ||||||||||||| |||||||||||| | |||| |||| ||| || |||||| |||||| |
|
|
| T |
761622 |
aatatggtcaaagtaaattaggtcaaaattacacattttcaaacaggtcatttattgcgggacagagggagtaactt |
761546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 9420745 - 9420811
Alignment:
| Q |
16 |
atgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
||||||||| || ||||| |||| | ||||||||||||||| |||||||||||| |||| |||||| |
|
|
| T |
9420745 |
atgatcaaaatatgttagatcaataatgcacattttcaaatagatcatctattatagaacagaggga |
9420811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 2026637 - 2026600
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatg |
57 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
2026637 |
tcaaagtaagttaggtcaaaattaaacattttcaaatg |
2026600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 7475374 - 7475443
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
||||||||||||||||| ||| | ||||||||| ||||| |||| ||||||||| |||||| |||||| |
|
|
| T |
7475374 |
aatatgatcaaagtaagctagattaaaattgcaaatttttaaatacgtcatctattgcggaactgaggga |
7475443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 29616315 - 29616360
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatgg |
58 |
Q |
| |
|
||||||||||||||||||||| |||||||| | |||||||||||| |
|
|
| T |
29616315 |
aatatgatcaaagtaagttagatcaaaatttaatattttcaaatgg |
29616360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 50; Significance: 9e-20; HSPs: 25)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 36819688 - 36819619
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| | |||| |||| ||||||||||||| |
|
|
| T |
36819688 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcggaacggaggga |
36819619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 47713431 - 47713496
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagggatta |
85 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||| || || ||||||||| |
|
|
| T |
47713431 |
tcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatctattatgggacagagggatta |
47713496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 18756664 - 18756606
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgga |
78 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
18756664 |
tcaaagtaagataggtcaaaattgcatattttcaaatgggtcatctattacggaacgga |
18756606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 38850774 - 38850708
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggag |
79 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
38850774 |
aatatggtcaaagtaagttaggtcaaaattacacattttcaaatgggtcatctattgtggaacggag |
38850708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 16807138 - 16807207
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| | |||| |||||||| ||||||||| |
|
|
| T |
16807138 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggaggga |
16807207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 37101018 - 37101087
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||||||||||||| | ||||||||| ||| ||||||||| |
|
|
| T |
37101018 |
aatatggtcaaagtaagttaggtcaaaattacacattttcaaataggtcatctattgcgggacggaggga |
37101087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 38069123 - 38069054
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| | |||| |||| ||||||||||||| |
|
|
| T |
38069123 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcggaacggaggga |
38069054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 40818689 - 40818754
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgga |
78 |
Q |
| |
|
|||||| ||| |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
40818689 |
aatatggtcagagtaagttagatcaaaattgcacattttcaaatagatcatctattacgggacgga |
40818754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 31496644 - 31496706
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| || |||||||||| ||||||||| |
|
|
| T |
31496644 |
tcaaagtaagttaggtcaaaattgtacattttcaaatgaattatctattacgagacggaggga |
31496706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 9173328 - 9173397
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||| |||| |||| | ||||||||| ||||||||||||| |
|
|
| T |
9173328 |
aatatggtcaaagtaagttaggtcaaaattacacgtttttaaattggtcatctattccggaacggaggga |
9173397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 28016187 - 28016119
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||||||||| ||||| ||| | ||||||||||| |
|
|
| T |
28016187 |
aatatggtcaaagtaagttagatcaaaattgcacattttcaaatgggtcatc-attgcagaacggaggga |
28016119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 30462213 - 30462282
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||||||||||||| |||||| |||| ||| ||||||||| |
|
|
| T |
30462213 |
aatatggtcaaagtaagttaagtcaaaattgcacattttcaaacagatcatttattgcgggacggaggga |
30462282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 32222622 - 32222553
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||| ||| ||||||| |||| ||||||||||||||||| | |||| ||||||||||||||||||||||| |
|
|
| T |
32222622 |
aatacgattaaagtaaattagatcaaaattgcacattttgagatgggtcatctattacggaacggaggga |
32222553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 46242472 - 46242516
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatg |
57 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46242472 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaatg |
46242516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 25274011 - 25274064
Alignment:
| Q |
15 |
tatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
25274011 |
tatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttatt |
25274064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 19817370 - 19817314
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacg |
76 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||||| ||||||||||||| ||||| |
|
|
| T |
19817370 |
tcaaagtaagttaggttaaaattatacattttcaaatagatcatctattacagaacg |
19817314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 5842189 - 5842142
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggat |
60 |
Q |
| |
|
|||||||||||||||| |||| | |||||||||||||||||||||||| |
|
|
| T |
5842189 |
aatatgatcaaagtaaattagattaaaattgcacattttcaaatggat |
5842142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 38441885 - 38441830
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||||| |||||||||||||||| |||||| |||||||||||||| ||||||||| |
|
|
| T |
38441885 |
aatatggtcaaagtaagttaggtaaaaattacacattttcaaatgagtcatctatt |
38441830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 4620139 - 4620097
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4620139 |
aatatggtcaaagtaagttaggtcaaaattacacattttcaaa |
4620097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 33376840 - 33376778
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
||||||||||||||||||||||| | | |||||||||||||||||||| ||| || |||||| |
|
|
| T |
33376840 |
tcaaagtaagttaggtcaaaattaaaaaatttcaaatggatcatctattgcgggacagaggga |
33376778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 35693822 - 35693864
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
35693822 |
aatatggtcgaagtaagttaggtcaaaattgcacattttcaaa |
35693864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 9136654 - 9136723
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||| ||| |||||||||||| |||||| |||||||||||||||||| ||| | ||||||| |
|
|
| T |
9136654 |
aatatggtcaaaataaactaggtcaaaattacacattatcaaatggatcatctattgcgggatggaggga |
9136723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 40232000 - 40231931
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||| ||| |||||||||||||||||||||||||| | | || |||||||| ||||||||| |
|
|
| T |
40232000 |
aatatggtcaaaataaattaggtcaaaattgcacattttcaaacaggttatttattacgggacggaggga |
40231931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 38259556 - 38259501
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||||||||||||||| |||| || |||||||| |||||||| | ||||||||||| |
|
|
| T |
38259556 |
aatatgatcaaagtaaattagatcgaaattgcaaattttcaactagatcatctatt |
38259501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 41007948 - 41008003
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||||| ||||||||||||||||||||||| || ||||| ||||| ||||||||| |
|
|
| T |
41007948 |
aatatggtcaaagtaagttaggtcaaaattacatatttttaaatgagtcatctatt |
41008003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 50; Significance: 9e-20; HSPs: 26)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 24949607 - 24949538
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||| |||||||||||||||| |||||||||||||||||||||||| ||||||||| ||| ||||||||| |
|
|
| T |
24949607 |
aatacgatcaaagtaagttagatcaaaattgcacattttcaaatgggtcatctattgcgggacggaggga |
24949538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 16661605 - 16661667
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||| ||| || |||||| |
|
|
| T |
16661605 |
tcaaagtaagttaggtcaaaattacacattttcaaatggatcatctattgcgggactgaggga |
16661667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 10109414 - 10109467
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacgga |
73 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
10109414 |
tcaaagtaagttaggtcaaaattgcacatttttaaatggatcatctattgcgga |
10109467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 17496314 - 17496383
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |||||| |||| ||| ||||||||| |
|
|
| T |
17496314 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggaggga |
17496383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 4890122 - 4890177
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4890122 |
aatatggtcaaagtaaattaggtcaaaattgcacatttttaaatggatcatctatt |
4890177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 2667328 - 2667390
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| |||| ||| ||||||||| |
|
|
| T |
2667328 |
tcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggaggga |
2667390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 6142503 - 6142545
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6142503 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
6142545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 29515022 - 29515064
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29515022 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
29515064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 24798542 - 24798611
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
24798542 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga |
24798611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 30699333 - 30699264
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||||||| ||| |||||| |||| ||||||||||||| |
|
|
| T |
30699333 |
aatatggtcaaagtaagttaggtcaaaattacacatttttaaacagatcatttattgcggaacggaggga |
30699264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 13358581 - 13358514
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg |
80 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||| |
|
|
| T |
13358581 |
aatatggtcaaagtaagttaggtcaaaattacacattttcaaataagtcatctattgtggaacggagg |
13358514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 2141640 - 2141598
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
2141640 |
aatatgatcaaagtaagttaggtcaaaattgtacattttcaaa |
2141598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 6188652 - 6188694
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
6188652 |
aatatgctcaaagtaagttaggtcaaaattgcacattttcaaa |
6188694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 24825237 - 24825195
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
24825237 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa |
24825195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 2397842 - 2397773
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
2397842 |
aatatggtcaaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga |
2397773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 29795523 - 29795454
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| | |||||||||||| ||||||||||||||||||||| |||||| |||| ||| ||||||||| |
|
|
| T |
29795523 |
aatatggttaaagtaagttagatcaaaattgcacattttcaaacagatcatttattgcgggacggaggga |
29795454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 31948637 - 31948706
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||| ||||||| |||| |||| ||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
31948637 |
aatatggtcaaaataagttaagtcataattacacattttcaaatggatcatctattgcgagacggaggga |
31948706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 32673820 - 32673755
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgga |
78 |
Q |
| |
|
|||||| ||||| |||||||| ||||||||||| ||||| |||| ||||||||||||||| ||||| |
|
|
| T |
32673820 |
aatatggtcaaaataagttagatcaaaattgcaaatttttaaatagatcatctattacgggacgga |
32673755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 2656673 - 2656708
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
2656673 |
tcaaagtaagttaggtcaaaattgcacattttcaaa |
2656708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 31708958 - 31708896
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
||||||||| ||| |||||||||||||||||| |||| ||||||||||| | | ||||||||| |
|
|
| T |
31708958 |
tcaaagtaaattaagtcaaaattgcacatttttaaatagatcatctattgcaggacggaggga |
31708896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 32541473 - 32541542
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||| ||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
32541473 |
aatatggtcaaagtaaattaggtcaaaattgcatattttcaaacaggtcatttattgcgggacggaggga |
32541542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 35117352 - 35117307
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatgg |
58 |
Q |
| |
|
|||||| ||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
35117352 |
aatatggtcaaagtaagttatgttaaaattgcacattttcaaatgg |
35117307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 28483110 - 28483046
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgg |
77 |
Q |
| |
|
|||||| | |||||||||||| ||||||||||||||||||||| |||||| |||| ||| |||| |
|
|
| T |
28483110 |
aatatggttaaagtaagttagatcaaaattgcacattttcaaacagatcatttattgcgggacgg |
28483046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 16969450 - 16969407
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaat |
56 |
Q |
| |
|
|||||| ||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
16969450 |
aatatggtcaaagtaaattaagtcaaaattgcacattttcaaat |
16969407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 9022912 - 9022870
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
9022912 |
aatatggtcaaagtatgttaggtcaaaattgcatattttcaaa |
9022870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 12677052 - 12676996
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaa-ttgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
|||||| ||||||||| |||| |||||| || |||||||||||||| |||||||||| |
|
|
| T |
12677052 |
aatatggtcaaagtaaattagatcaaaaattacacattttcaaatgaatcatctatt |
12676996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0500 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0500
Description:
Target: scaffold0500; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 667 - 736
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||| |||||||||||| ||||||||| ||| |||||||| |
|
|
| T |
667 |
aatatggtcaaactaagttaggtcaaaattgcatattttcaaatgggtcatctattgcggggcggaggga |
736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0289
Description:
Target: scaffold0289; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 9198 - 9153
Alignment:
| Q |
22 |
aaagtaagttaggtcaaaattgcacattttcaaatggatcatctat |
67 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
9198 |
aaagtaagttagatcaaaattgcacattttcaaatggatcatctat |
9153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0221 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0221
Description:
Target: scaffold0221; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 5448 - 5379
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| | |||| |||| ||| ||||||||| |
|
|
| T |
5448 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga |
5379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 184038 - 183996
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa |
55 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
184038 |
aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa |
183996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0283 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0283
Description:
Target: scaffold0283; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 3067 - 2999
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga |
82 |
Q |
| |
|
||||| |||||||||| ||||||||||||||||||||| |||||| ||||||||| ||| ||||||||| |
|
|
| T |
3067 |
aatataatcaaagtaaaataggtcaaaattgcacatttttaaatgggtcatctattgcgg-acggaggga |
2999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1248 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1248
Description:
Target: scaffold1248; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 1448 - 1507
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacgg |
72 |
Q |
| |
|
|||||| ||||||||||||| ||||||||| |||||||| |||| |||||||||||||| |
|
|
| T |
1448 |
aatatggtcaaagtaagttatgtcaaaattacacatttttaaataaatcatctattacgg |
1507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0952 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0952
Description:
Target: scaffold0952; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 865 - 806
Alignment:
| Q |
13 |
aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacgg |
72 |
Q |
| |
|
|||||| ||||||||||||| ||||||||| |||||||| |||| |||||||||||||| |
|
|
| T |
865 |
aatatggtcaaagtaagttatgtcaaaattacacatttttaaataaatcatctattacgg |
806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0069
Description:
Target: scaffold0069; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 4506 - 4458
Alignment:
| Q |
20 |
tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt |
68 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||| ||||| |||| |
|
|
| T |
4506 |
tcaaaataagttaggtcaaaattgcacatttttaaatgaatcatttatt |
4458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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