View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7504_low_86 (Length: 203)
Name: NF7504_low_86
Description: NF7504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7504_low_86 |
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Alignment Details
Target: chr6 (Bit Score: 116; Significance: 3e-59; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 19 - 194
Target Start/End: Original strand, 34224755 - 34224921
Alignment:
| Q |
19 |
ttttcattgcttgaatttttgaagggctcattcaaaaatcattaaagttgnnnnnnnnatcatcaaaatcatcaaaaacaagaatttttcaagctgggtt |
118 |
Q |
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| T |
34224755 |
ttttcattgcttgaatttttgaagggctcattcaaaaatcattaaagttgttttttttatca---------tcaaaaacaagaatttttcaagctgggtt |
34224845 |
T |
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| Q |
119 |
ctgaaggtgttaagaagatgggtttaactgaacctaaggttgttactggtcctgctggttatgtacttgatgatgt |
194 |
Q |
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| T |
34224846 |
ctgaaggtgttaagaagatgggtttaactgaacctaaggttgttactggtcctgctggttatgtacttgaagatgt |
34224921 |
T |
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