View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7506_high_19 (Length: 316)
Name: NF7506_high_19
Description: NF7506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7506_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 18 - 306
Target Start/End: Original strand, 48254949 - 48255236
Alignment:
| Q |
18 |
tttccaagtatatctggtgatggaagtttggtttctgagcaacaattaaaagaaaatagtatgttaatatattaacgaaggaaattaaaaggactaaact |
117 |
Q |
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| T |
48254949 |
tttccaagtatatctggtgatggaagtttggtttctgagcaacaattaaaagaaattagtatgttaatatattaacgaaggaaattaaaagga-taaact |
48255047 |
T |
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| Q |
118 |
tagatgcagtagcagacgtaattttcgaaccattttaaaattgttagtgccagttataagagtagaaagtttgtgcattatgtaccttgttgatcagctt |
217 |
Q |
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| T |
48255048 |
tagatgcagtaccagacgtaattttcaaaccattttaaaattgttagtgccagttataagagtagaaagtttgtgcattatgtaccttgttgatcagctt |
48255147 |
T |
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| Q |
218 |
ctttaactttggttgcaaattgtttcatttggttgagctgaatagcaagggagaaagggctgatcccagtgacaaacaaagaagtatta |
306 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48255148 |
ctttaactttggttgcaaattgtttcatttgggtgagctgaatagcaagggagaaagggctgatcccagtgacaaacaaagaagtatta |
48255236 |
T |
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