View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7506_low_27 (Length: 234)
Name: NF7506_low_27
Description: NF7506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7506_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 27380451 - 27380662
Alignment:
| Q |
1 |
caacaaatatatgctgctgaatttcatcatctttgtagaatgaaacatgtctaagaaccaaaagggtagtgtttaaacttcaaaaggagtggtttttctt |
100 |
Q |
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| T |
27380451 |
caacaaatatatgctgctgaatttcatcatctttgtagaatgaaacatgtctaagaaccaaaagggtagtgtttaaacttcaaaaggagtggtttttctt |
27380550 |
T |
|
| Q |
101 |
cgtgaatttcaacagattcatttttagcaagaacattatcatttgtttgaatagagaataaagggttggtaagatatgaaactataagtggaagtttctt |
200 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27380551 |
cgtgaatttcaacagattcatttttagcaagaacaatatcatttgtttgaatagagaataaagggttggtaagatatgaaactataagtggaagtttctt |
27380650 |
T |
|
| Q |
201 |
ctcagcacaaga |
212 |
Q |
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|||||||||||| |
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| T |
27380651 |
ctcagcacaaga |
27380662 |
T |
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