View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7506_low_9 (Length: 476)
Name: NF7506_low_9
Description: NF7506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7506_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 442; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 442; E-Value: 0
Query Start/End: Original strand, 14 - 459
Target Start/End: Original strand, 48120554 - 48120999
Alignment:
| Q |
14 |
ttctccatttgtaatatcaatgtggtgtgtaacttgtttttcactagaagttcccaccagaatattgtgctgtccaatcaccaactttcttttaccatca |
113 |
Q |
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| T |
48120554 |
ttctccatttgtaatatcaatgtggtgtgtaacttgtttttcactagaagttcccaccagaatattgtgctgtccaatcaccaactttcttttaccatca |
48120653 |
T |
|
| Q |
114 |
ctatcaacattacttagcattttgcatatatcaatttttactgtcacaaactctgtcttcccaaccttaacttgtgctctttcaaatcctatcaattgtt |
213 |
Q |
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| T |
48120654 |
ctatcaacattacttagcattttgcatatatcaatttttactgtcacaaactctgtcttcccaaccttaacttgtgctctttcaaatcctatcaattgtt |
48120753 |
T |
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| Q |
214 |
tcaatggaacaccactcactgcctctgaacttggtggctccaaaaacactaacaccacatgagatccatcaaaaggtccattgttcttcacaccaatcac |
313 |
Q |
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| T |
48120754 |
tcaatggaacaccactcactgcctctgaacttggtggctccaaaaacactaacaccacatgagatccatcaaaaggtccattgttcttcacaccaatcac |
48120853 |
T |
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| Q |
314 |
aagcgaaaatgtcaaattgaaacaacttatggtggagatatcaattacttgatcatcaaggaagatattattaagtggttttgaaatggatgtgtttttc |
413 |
Q |
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| T |
48120854 |
aagcgaaaatgtcaaattgaaacaacttatggtggagatatcaattacttgatcatcaaggaagatattattaagtggttttgaaatggatgtgtttttc |
48120953 |
T |
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| Q |
414 |
tggatcattatggtggaaggagcagatgctatgtgggtggagaatg |
459 |
Q |
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| T |
48120954 |
tggagcattatggtggaaggagcagatgctatgtgggtggagaatg |
48120999 |
T |
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