View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7508_high_18 (Length: 369)

Name: NF7508_high_18
Description: NF7508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7508_high_18
NF7508_high_18
[»] chr5 (30 HSPs)
chr5 (1-369)||(41558707-41559075)
chr5 (297-369)||(13287423-13287495)
chr5 (40-204)||(41542727-41542895)
chr5 (299-369)||(6770508-6770578)
chr5 (297-369)||(41995434-41995506)
chr5 (315-369)||(31264421-31264473)
chr5 (323-369)||(16199309-16199354)
chr5 (297-367)||(19579664-19579734)
chr5 (314-367)||(7175045-7175098)
chr5 (312-369)||(22423836-22423893)
chr5 (304-369)||(24906325-24906390)
chr5 (313-369)||(9449448-9449504)
chr5 (297-369)||(21191080-21191152)
chr5 (297-369)||(21522713-21522785)
chr5 (297-369)||(21533279-21533351)
chr5 (299-367)||(22013379-22013447)
chr5 (297-369)||(26205784-26205856)
chr5 (299-358)||(19820429-19820488)
chr5 (314-369)||(32428950-32429005)
chr5 (297-364)||(42469184-42469251)
chr5 (297-367)||(19552569-19552639)
chr5 (302-364)||(36642791-36642853)
chr5 (300-369)||(6247588-6247657)
chr5 (321-366)||(36908736-36908781)
chr5 (321-366)||(36908785-36908830)
chr5 (341-369)||(11596479-11596507)
chr5 (297-357)||(15382440-15382500)
chr5 (317-369)||(19737506-19737558)
chr5 (341-369)||(28296335-28296363)
chr5 (317-369)||(39698524-39698576)
[»] scaffold0007 (1 HSPs)
scaffold0007 (297-366)||(225295-225364)
[»] chr3 (25 HSPs)
chr3 (297-366)||(24205068-24205137)
chr3 (299-367)||(55401040-55401108)
chr3 (297-369)||(3164049-3164121)
chr3 (297-352)||(10335327-10335382)
chr3 (297-368)||(750643-750715)
chr3 (297-369)||(15796318-15796390)
chr3 (297-369)||(16000040-16000112)
chr3 (297-361)||(26665099-26665163)
chr3 (334-369)||(16789674-16789709)
chr3 (298-369)||(28917965-28918036)
chr3 (320-367)||(46191371-46191418)
chr3 (320-357)||(2608425-2608462)
chr3 (320-369)||(41319334-41319383)
chr3 (297-369)||(4990991-4991063)
chr3 (297-369)||(8383220-8383292)
chr3 (299-367)||(8587047-8587115)
chr3 (341-369)||(9210849-9210877)
chr3 (317-369)||(11093553-11093605)
chr3 (313-369)||(11493385-11493441)
chr3 (341-369)||(20691326-20691354)
chr3 (341-369)||(21149074-21149102)
chr3 (297-369)||(25652055-25652127)
chr3 (317-369)||(29112304-29112356)
chr3 (329-369)||(34189422-34189462)
chr3 (320-360)||(35335587-35335627)
[»] scaffold0306 (1 HSPs)
scaffold0306 (299-369)||(13365-13435)
[»] scaffold0152 (1 HSPs)
scaffold0152 (299-369)||(21892-21962)
[»] chr7 (21 HSPs)
chr7 (297-367)||(11061102-11061172)
chr7 (299-369)||(27945006-27945076)
chr7 (298-366)||(43249957-43250025)
chr7 (297-369)||(5409860-5409932)
chr7 (297-369)||(1885536-1885608)
chr7 (313-369)||(23930198-23930254)
chr7 (298-369)||(11722122-11722193)
chr7 (302-369)||(26733272-26733339)
chr7 (326-369)||(35238208-35238251)
chr7 (297-367)||(598171-598241)
chr7 (297-331)||(9778471-9778505)
chr7 (299-369)||(24339607-24339677)
chr7 (319-369)||(30516381-30516431)
chr7 (320-369)||(36013822-36013872)
chr7 (295-369)||(36297369-36297442)
chr7 (323-364)||(927866-927907)
chr7 (332-369)||(4909149-4909186)
chr7 (332-369)||(38134430-38134467)
chr7 (297-369)||(17851394-17851466)
chr7 (297-369)||(21141006-21141078)
chr7 (341-369)||(44172914-44172942)
[»] chr6 (35 HSPs)
chr6 (299-363)||(33303624-33303688)
chr6 (298-369)||(34595098-34595169)
chr6 (297-369)||(8776997-8777069)
chr6 (297-369)||(16766660-16766732)
chr6 (297-367)||(426540-426610)
chr6 (299-369)||(1334626-1334696)
chr6 (297-367)||(6389706-6389776)
chr6 (297-367)||(7625085-7625155)
chr6 (299-368)||(8365544-8365613)
chr6 (299-367)||(853885-853953)
chr6 (321-369)||(9024200-9024248)
chr6 (297-369)||(9107394-9107466)
chr6 (316-364)||(10760870-10760918)
chr6 (297-368)||(9027141-9027212)
chr6 (314-369)||(15443675-15443730)
chr6 (302-369)||(19044432-19044499)
chr6 (306-365)||(20518317-20518376)
chr6 (297-367)||(7938079-7938149)
chr6 (307-369)||(12696297-12696359)
chr6 (333-367)||(21385170-21385204)
chr6 (316-369)||(33135813-33135867)
chr6 (323-360)||(7250996-7251033)
chr6 (298-367)||(13211307-13211376)
chr6 (312-369)||(13851714-13851771)
chr6 (310-367)||(25038097-25038154)
chr6 (297-366)||(25096386-25096455)
chr6 (320-369)||(34446551-34446600)
chr6 (341-369)||(2140505-2140533)
chr6 (284-367)||(2153913-2153994)
chr6 (334-366)||(4859140-4859172)
chr6 (297-369)||(5000650-5000722)
chr6 (297-369)||(7977854-7977926)
chr6 (317-365)||(19147431-19147479)
chr6 (341-369)||(29711269-29711297)
chr6 (339-367)||(33076413-33076441)
[»] chr4 (26 HSPs)
chr4 (299-367)||(12895300-12895368)
chr4 (314-369)||(34589730-34589785)
chr4 (297-369)||(23293010-23293082)
chr4 (297-369)||(24343470-24343542)
chr4 (297-367)||(27706203-27706273)
chr4 (320-369)||(48845126-48845176)
chr4 (321-369)||(19230333-19230381)
chr4 (297-369)||(36635287-36635359)
chr4 (314-369)||(7012046-7012101)
chr4 (298-369)||(21945467-21945538)
chr4 (314-369)||(40179660-40179715)
chr4 (297-367)||(35158011-35158081)
chr4 (312-369)||(22440624-22440681)
chr4 (328-369)||(31243572-31243613)
chr4 (320-369)||(37496690-37496739)
chr4 (341-369)||(5654615-5654643)
chr4 (320-360)||(7367539-7367579)
chr4 (341-369)||(10546155-10546183)
chr4 (341-369)||(14465318-14465346)
chr4 (341-369)||(18513265-18513293)
chr4 (301-369)||(20521873-20521941)
chr4 (341-369)||(20743302-20743330)
chr4 (341-369)||(32910558-32910586)
chr4 (341-369)||(43188619-43188647)
chr4 (320-360)||(48557611-48557651)
chr4 (297-369)||(53968509-53968581)
[»] chr1 (23 HSPs)
chr1 (297-369)||(1486733-1486805)
chr1 (293-366)||(22794105-22794178)
chr1 (297-369)||(34298399-34298471)
chr1 (312-367)||(7779587-7779641)
chr1 (314-369)||(16812523-16812578)
chr1 (302-369)||(20157374-20157441)
chr1 (300-369)||(398789-398858)
chr1 (299-368)||(10572614-10572683)
chr1 (299-352)||(48040503-48040556)
chr1 (301-369)||(7918235-7918303)
chr1 (298-369)||(2896145-2896216)
chr1 (299-369)||(1262849-1262919)
chr1 (297-367)||(15323126-15323196)
chr1 (321-367)||(43328454-43328500)
chr1 (340-369)||(3921673-3921702)
chr1 (297-358)||(40917714-40917775)
chr1 (299-367)||(5927366-5927434)
chr1 (297-369)||(6612195-6612267)
chr1 (321-365)||(8203809-8203852)
chr1 (341-369)||(11571592-11571620)
chr1 (341-369)||(40747797-40747825)
chr1 (341-369)||(42325567-42325595)
chr1 (297-369)||(42359473-42359545)
[»] chr8 (22 HSPs)
chr8 (326-369)||(34201070-34201113)
chr8 (297-369)||(22651939-22652011)
chr8 (299-369)||(28642373-28642443)
chr8 (297-366)||(44067479-44067548)
chr8 (317-369)||(14692443-14692494)
chr8 (301-369)||(29510328-29510396)
chr8 (320-359)||(11815815-11815854)
chr8 (298-369)||(18170506-18170577)
chr8 (298-369)||(18634074-18634145)
chr8 (334-369)||(40063951-40063986)
chr8 (297-367)||(2572082-2572152)
chr8 (299-369)||(24362226-24362296)
chr8 (299-369)||(25192371-25192441)
chr8 (297-367)||(39820392-39820462)
chr8 (297-330)||(926851-926884)
chr8 (334-367)||(13845234-13845267)
chr8 (320-361)||(14943129-14943170)
chr8 (297-369)||(24413583-24413656)
chr8 (340-369)||(28883902-28883931)
chr8 (301-369)||(13436988-13437056)
chr8 (307-367)||(20873042-20873102)
chr8 (341-369)||(30068052-30068080)
[»] chr2 (21 HSPs)
chr2 (297-367)||(23354678-23354748)
chr2 (312-369)||(12940959-12941016)
chr2 (297-369)||(15972836-15972908)
chr2 (297-369)||(36756368-36756440)
chr2 (307-367)||(18841039-18841099)
chr2 (299-367)||(20539700-20539768)
chr2 (299-367)||(23355021-23355089)
chr2 (302-369)||(18421931-18421998)
chr2 (299-369)||(19536421-19536492)
chr2 (297-367)||(34785008-34785078)
chr2 (303-369)||(39399881-39399947)
chr2 (312-369)||(10254005-10254062)
chr2 (299-368)||(11670720-11670789)
chr2 (341-369)||(10535783-10535811)
chr2 (297-369)||(15657827-15657899)
chr2 (341-369)||(18570979-18571007)
chr2 (297-369)||(28412313-28412385)
chr2 (341-369)||(30563416-30563444)
chr2 (321-369)||(37497107-37497155)
chr2 (341-369)||(40681989-40682017)
chr2 (301-369)||(43586029-43586097)
[»] scaffold0223 (1 HSPs)
scaffold0223 (299-369)||(20137-20207)
[»] scaffold0053 (1 HSPs)
scaffold0053 (297-358)||(8761-8822)
[»] scaffold0003 (1 HSPs)
scaffold0003 (298-367)||(241558-241627)
[»] scaffold0168 (1 HSPs)
scaffold0168 (297-365)||(21006-21074)
[»] scaffold0027 (1 HSPs)
scaffold0027 (297-369)||(46645-46717)
[»] scaffold0018 (1 HSPs)
scaffold0018 (302-358)||(178854-178910)
[»] scaffold0008 (1 HSPs)
scaffold0008 (297-369)||(263396-263468)
[»] scaffold0598 (1 HSPs)
scaffold0598 (314-369)||(8077-8132)
[»] scaffold0020 (1 HSPs)
scaffold0020 (299-368)||(135337-135406)
[»] scaffold0571 (1 HSPs)
scaffold0571 (341-369)||(7697-7725)
[»] scaffold0122 (1 HSPs)
scaffold0122 (297-369)||(8629-8701)
[»] scaffold0021 (1 HSPs)
scaffold0021 (297-369)||(130445-130517)


Alignment Details
Target: chr5 (Bit Score: 369; Significance: 0; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 1 - 369
Target Start/End: Complemental strand, 41559075 - 41558707
Alignment:
Q  1 atacacgaaaaagaagtcagtatatgtcaagggtggggagatagacctttaccctacaaataaatattttaagaattagcaatatagcagtcatgatact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41559075 atacacgaaaaagaagtcagtatatgtcaagggtggggagatagacctttaccctacaaataaatattttaagaattagcaatatagcagtcatgatact 41558976  T
Q  101 agcatttaaacaatctcatctataagattgacgcaaactaaacctgagtacaatgaagaatcttagtaagtttatacaaaggcttatgaataattcttta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41558975 agcatttaaacaatctcatctataagattgacgcaaactaaacctgagtacaatgaagaatcttagtaagtttatacaaaggcttatgaataattcttta 41558876  T
Q  201 ttaaaaagtgaatgaattgaattttatcacacacgtcaatgtccaacaccgacatttgccagacacaacttctatcagaagccatgaagcacaaacacac 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41558875 ttaaaaagtgaatgaattgaattttatcacacacgtcaatgtccaacaccgacatttgccagacacaacttctatcagaagccatgaagcacaaacacac 41558776  T
Q  301 ggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41558775 ggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 41558707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 13287495 - 13287423
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||||| |||||||||||||| |||| | |||||| |||||||||||| ||||| ||||||||||    
T  13287495 acacggacaccggacacgacacggacactaacacgtcgacacagataataatttgaaaaaatcacataattca 13287423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 40 - 204
Target Start/End: Complemental strand, 41542895 - 41542727
Alignment:
Q  40 gatagacctttaccctacaaataaatattttaagaattagcaatatagcag-tcatgatactagcatttaaacaatctca--tctataagattgacgcaa 136  Q
    |||| ||| |||||||||||| |||| ||| ||||||||| || ||| ||| ||| |  || ||| |||||||| |||||  ||||||||||||   |||    
T  41542895 gataaaccattaccctacaaacaaatctttcaagaattagtaa-atatcagatcagggcaccagcttttaaacagtctcacatctataagattgtgacaa 41542797  T
Q  137 actaaacctgagtacaatgaagaatcttagtaagtttat--acaaaggcttatgaataattctttattaa 204  Q
    |||||||| ||||||||||||||||||||||||| || |   ||||||||| ||||||||||| ||||||    
T  41542796 actaaaccagagtacaatgaagaatcttagtaagattctgaccaaaggcttctgaataattctctattaa 41542727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 369
Target Start/End: Original strand, 6770508 - 6770578
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||| | | |||||||||||||||||| |||||||| ||||||||| ||||||| ||||||||||    
T  6770508 acggacaccgaacatgacacggacactgacacactgacacaactaataatttaagaaaatcacataattca 6770578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 41995434 - 41995506
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||| ||||||||||| |||||||||||   ||||||| |||||||| || ||||| ||||||||||    
T  41995434 acacggacactggatacgacacagacactgacacgccgacacaactaataattcgaaaaaatcacataattca 41995506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 31264421 - 31264473
Alignment:
Q  315 acacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||  |||||| ||||||| ||||||||||||||||||||||||||||    
T  31264421 acacggacac--acacatcgacacaagtaataatttgagaaaatgacataattca 31264473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 369
Target Start/End: Complemental strand, 16199354 - 16199309
Alignment:
Q  323 actgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||    
T  16199354 actgacacatt-acacaaataataatttgacaaaatgacataattca 16199309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 367
Target Start/End: Original strand, 19579664 - 19579734
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||| |||||||||||| ||||||||||||| ||   ||||||  ||||||||||||||||| ||||||||    
T  19579664 acaccgacaccggatacaacacggacactgatacgccgacacagctaataatttgagaaaatcacataatt 19579734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 314 - 367
Target Start/End: Complemental strand, 7175098 - 7175045
Alignment:
Q  314 gacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    ||||||||||||||||||| |||||   ||||||||||||||||| ||||||||    
T  7175098 gacacggacactgacacatcgacaccgttaataatttgagaaaatcacataatt 7175045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 369
Target Start/End: Complemental strand, 22423893 - 22423836
Alignment:
Q  312 acgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||| ||||||||  |||||| | ||||||||||||||||| ||||||||||    
T  22423893 acgacacggatactgacaccctgacactactaataatttgagaaaatcacataattca 22423836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 369
Target Start/End: Complemental strand, 24906390 - 24906325
Alignment:
Q  304 caccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||| |||||||| ||||||||||    ||||| |||||||||||| ||||||||||||||||    
T  24906390 caccggacacgacacgaacactgacacgccaacacagataataatttgaaaaaatgacataattca 24906325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 369
Target Start/End: Original strand, 9449448 - 9449504
Alignment:
Q  313 cgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||||| |||   ||||| ||||||||||||||||||| ||||||||||    
T  9449448 cgacacggacactggcacgccgacaccaataataatttgagaaaatcacataattca 9449504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 21191152 - 21191080
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||| ||||||||| ||||||||||||||||||    ||||||  ||||||||||| ||||| ||||||||||    
T  21191152 acactgacaccggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattca 21191080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 21522713 - 21522785
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||| ||||||| |||||||||||||||||||   ||||||  ||||||||| | ||||| ||||||||||    
T  21522713 acacggtcaccggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattca 21522785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 21533279 - 21533351
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||| ||||||| |||||||||||||||||||   ||||||  ||||||||| | ||||| ||||||||||    
T  21533279 acacggtcaccggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattca 21533351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 22013379 - 22013447
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||||||||||| |||||||||||||||||||   ||||||  ||||||||||  ||||| ||||||||    
T  22013379 acggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaattacataatt 22013447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 26205856 - 26205784
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||||| | |||| |||||||||||| | || ||  |||| | ||||||||||||||||||||||    
T  26205856 acacggacaccggacatgacatggacactgacacgtcgataccgataaaattttgagaaaatgacataattca 26205784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 358
Target Start/End: Complemental strand, 19820488 - 19820429
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaat 358  Q
    |||||||||||| |||||||||||||||||||   |||||   |||||||||||||||||    
T  19820488 acggacaccggacacgacacggacactgacactccgacaccgctaataatttgagaaaat 19820429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 314 - 369
Target Start/End: Complemental strand, 32429005 - 32428950
Alignment:
Q  314 gacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||||||||   ||||||  |||||||||||||||| ||||||||||||    
T  32429005 gacacggacactgacatggtgacactgataataatttgagaaagtgacataattca 32428950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 364
Target Start/End: Original strand, 42469184 - 42469251
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacata 364  Q
    |||||||||||| | |||||||||| | ||||||   |||||  ||||||||||||||||||||||||    
T  42469184 acacggacaccgaacacgacacggataatgacacgccgacacggataataatttgagaaaatgacata 42469251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 367
Target Start/End: Complemental strand, 19552639 - 19552569
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||||| ||||| | |||||||||||||||||||   ||||||  ||||||||||| ||||| ||||||||    
T  19552639 acacggccaccgaacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataatt 19552569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 36642853 - 36642791
Alignment:
Q  302 gacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacata 364  Q
    ||||||||| |||||||||||||||||||   ||||||  ||||||||||| ||| |||||||    
T  36642853 gacaccggacacgacacggacactgacacgccgacacagttaataatttgaaaaagtgacata 36642791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 369
Target Start/End: Original strand, 6247588 - 6247657
Alignment:
Q  300 cggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||| |||| ||| ||||||||||   ||||||  ||||||||||| ||||| ||||||||||    
T  6247588 cggacaccggacacgatacgcacactgacacgccgacacatctaataatttgaaaaaatcacataattca 6247657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 366
Target Start/End: Complemental strand, 36908781 - 36908736
Alignment:
Q  321 acactgacacattgacacaaataataatttgagaaaatgacataat 366  Q
    |||| ||||||| ||||| |||||||||||||| ||||||||||||    
T  36908781 acaccgacacatagacaccaataataatttgagcaaatgacataat 36908736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 366
Target Start/End: Complemental strand, 36908830 - 36908785
Alignment:
Q  321 acactgacacattgacacaaataataatttgagaaaatgacataat 366  Q
    |||| ||||||| ||||| |||||||||||||| ||||||||||||    
T  36908830 acaccgacacatagacaccaataataatttgagcaaatgacataat 36908785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Complemental strand, 11596507 - 11596479
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  11596507 ataataatttgagaaaatgacataattca 11596479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 357
Target Start/End: Original strand, 15382440 - 15382500
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaa 357  Q
    |||||||||||||| |||||||||||| ||||||   ||||||  ||||||||||| ||||    
T  15382440 acacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaa 15382500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 19737558 - 19737506
Alignment:
Q  317 acggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||||||  ||| ||  |||||||||||||||||| ||||||||||    
T  19737558 acggacactgacacgctgaaaccgataataatttgagaaaattacataattca 19737506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Original strand, 28296335 - 28296363
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  28296335 ataataatttgagaaaatgacataattca 28296363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 39698524 - 39698576
Alignment:
Q  317 acggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||||||  |||||||  ||||||||||| ||||| ||||||||||    
T  39698524 acggacactgacacgctgacacagctaataatttgaaaaaatcacataattca 39698576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 297 - 366
Target Start/End: Complemental strand, 225364 - 225295
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataat 366  Q
    |||||||||||||| |||||||||||||||||||   |||||| ||||||||||||||||||||||||||    
T  225364 acacggacaccggacacgacacggacactgacacgccgacacagataataatttgagaaaatgacataat 225295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 297 - 366
Target Start/End: Complemental strand, 24205137 - 24205068
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataat 366  Q
    |||||||||||||| |||||||||||||||||||   |||||  ||||||||||||||||||||||||||    
T  24205137 acacggacaccggacacgacacggacactgacacgccgacacggataataatttgagaaaatgacataat 24205068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 55401040 - 55401108
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    ||||||||||||||||||||||||||||| ||   ||||||| ||||||||||| ||||| ||||||||    
T  55401040 acggacaccggatacgacacggacactgatacgccgacacaactaataatttgaaaaaatcacataatt 55401108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 3164121 - 3164049
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||||| |||||||||||| || ||| | ||||||  ||||||||||| ||||| ||||||||||    
T  3164121 acacggacaccggacacgacacggacaatggcacgtcgacacagctaataatttgaaaaaatcacataattca 3164049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 352
Target Start/End: Complemental strand, 10335382 - 10335327
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttga 352  Q
    |||||||||||||| |||||||||||||||||||   ||||||| |||||||||||    
T  10335382 acacggacaccggacacgacacggacactgacacgccgacacaactaataatttga 10335327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 368
Target Start/End: Complemental strand, 750715 - 750643
Alignment:
Q  297 acacggacaccggatacgacacggacac-tgacacattgacacaaataataatttgagaaaatgacataattc 368  Q
    |||||||||||||| ||||||||||||| ||||||   ||||||| ||||||||||| || || |||||||||    
T  750715 acacggacaccggacacgacacggacacttgacacggcgacacaactaataatttgaaaatatcacataattc 750643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 15796390 - 15796318
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||||| |||||||||||| ||||||   ||||||  ||||||||||| ||||| | ||||||||    
T  15796390 acacggacaccggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattca 15796318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 16000112 - 16000040
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||| | ||||||| |||||||||||   ||||||| ||||||||| | ||||| ||||||||||    
T  16000112 acacggacaccgaacacgacacagacactgacacgccgacacaactaataatttaaaaaaataacataattca 16000040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 361
Target Start/End: Original strand, 26665099 - 26665163
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgac 361  Q
    ||||||||| ||||||| |||| ||||| || | |  ||||||||||||||||||||||||||||    
T  26665099 acacggacatcggatacaacacagacaccgataaaccgacacaaataataatttgagaaaatgac 26665163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 334 - 369
Target Start/End: Complemental strand, 16789709 - 16789674
Alignment:
Q  334 gacacaaataataatttgagaaaatgacataattca 369  Q
    |||||| |||||||||||||||||||||||||||||    
T  16789709 gacacagataataatttgagaaaatgacataattca 16789674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 28917965 - 28918036
Alignment:
Q  298 cacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||||| |||||||||| ||||||||   |||| |  ||||||||||| ||||| ||||||||||    
T  28917965 cacggacaccggacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatcacataattca 28918036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 367
Target Start/End: Complemental strand, 46191418 - 46191371
Alignment:
Q  320 gacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    ||||| ||||||| ||||| ||||||||||||||||||| ||||||||    
T  46191418 gacacggacacatcgacaccaataataatttgagaaaatcacataatt 46191371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 2608425 - 2608462
Alignment:
Q  320 gacactgacacattgacacaaataataatttgagaaaa 357  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  2608425 gacactgacacattgacactaataatattttgagaaaa 2608462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 369
Target Start/End: Complemental strand, 41319383 - 41319334
Alignment:
Q  320 gacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||| ||||| | ||||| ||||||||||||| ||||||||||||||||    
T  41319383 gacacggacacgtcgacaccaataataatttgaaaaaatgacataattca 41319334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 4991063 - 4990991
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||| | |||||||||| ||||||||   |||||   ||||| ||||||||||| ||||||||||    
T  4991063 acacggacaccgaacacgacacggagactgacactccgacaccgctaatagtttgagaaaattacataattca 4990991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 8383220 - 8383292
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||| ||| |||||||||||| ||||||   |||||   ||||||||||||||||| | ||||||||    
T  8383220 acacggacactggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattca 8383292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 8587115 - 8587047
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||||||||||| | |||||||||||||||||   ||||||  || |||||||| ||||| ||||||||    
T  8587115 acggacaccggacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatcacataatt 8587047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Complemental strand, 9210877 - 9210849
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  9210877 ataataatttgagaaaatgacataattca 9210849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 11093553 - 11093605
Alignment:
Q  317 acggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||| ||| |||||||| ||||  |||||||||||| ||||||||||||||||    
T  11093553 acgggcacggacacatttacactgataataatttgaaaaaatgacataattca 11093605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 369
Target Start/End: Complemental strand, 11493441 - 11493385
Alignment:
Q  313 cgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||| |||||| | ||||| | ||||||| ||||||||| ||||||||||    
T  11493441 cgacacggacattgacacgtcgacaccactaataatgtgagaaaatcacataattca 11493385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Original strand, 20691326 - 20691354
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  20691326 ataataatttgagaaaatgacataattca 20691354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Original strand, 21149074 - 21149102
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  21149074 ataataatttgagaaaatgacataattca 21149102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 25652127 - 25652055
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||| ||||| || |||||||||||||| ||||    ||||  |||||||||||||||||||| ||||||||    
T  25652127 acacgaacaccagacacgacacggacactaacacgccaacacggataataatttgagaaaatgatataattca 25652055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 29112356 - 29112304
Alignment:
Q  317 acggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||||| ||||||| | |||| |||||||||||| | ||||||||    
T  29112356 acggacactgacacgttgacaccactaattatttgagaaaatcatataattca 29112304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 369
Target Start/End: Original strand, 34189422 - 34189462
Alignment:
Q  329 acattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||| |||||| |||||||||||||||||||||||| ||||    
T  34189422 acatcgacacagataataatttgagaaaatgacatatttca 34189462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 360
Target Start/End: Original strand, 35335587 - 35335627
Alignment:
Q  320 gacactgacacattgacacaaataataatttgagaaaatga 360  Q
    ||||||||||||| ||||| | |||||||||||||||||||    
T  35335587 gacactgacacatagacactagtaataatttgagaaaatga 35335627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 369
Target Start/End: Original strand, 13365 - 13435
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||| | |||||||||||||||||   ||||||| ||||||||||||||||| ||||||||||    
T  13365 acggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatcacataattca 13435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 369
Target Start/End: Complemental strand, 21962 - 21892
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||| | |||||||||||||||||   ||||||| ||||||||||||||||| ||||||||||    
T  21962 acggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatcacataattca 21892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 367
Target Start/End: Complemental strand, 11061172 - 11061102
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    ||||||||| |||||||||||||||||||||||||  ||||||  ||||||||||| ||||| ||||||||    
T  11061172 acacggacatcggatacgacacggacactgacacaccgacacagctaataatttgaaaaaatcacataatt 11061102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 369
Target Start/End: Original strand, 27945006 - 27945076
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||| |||||||||||||||||||   ||||| | ||||||||||||||||| ||||||||||    
T  27945006 acggacaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattca 27945076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 298 - 366
Target Start/End: Original strand, 43249957 - 43250025
Alignment:
Q  298 cacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataat 366  Q
    ||||||||||||| | |||||||||||||||||   |||||  ||||||||||||||||||||||||||    
T  43249957 cacggacaccggacaagacacggacactgacacgccgacacggataataatttgagaaaatgacataat 43250025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 5409932 - 5409860
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||| |||||||||||||||| ||||||||||||  ||| |||  ||||||||||| ||||| ||||||||||    
T  5409932 acacagacaccggatacgacatggacactgacacgctgatacagctaataatttgaaaaaatcacataattca 5409860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 1885536 - 1885608
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||||| ||||||| || || ||||||| |||||  |||| | ||||| ||||||||||||||||    
T  1885536 acacggacaccggacacgacactgatacggacacatcgacacggataaaattttgaaaaaatgacataattca 1885608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 369
Target Start/End: Original strand, 23930198 - 23930254
Alignment:
Q  313 cgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||| |||| |||||||| |||||  ||| |||||||||||||||||||||||||    
T  23930198 cgacaccgacattgacacatcgacacggatagtaatttgagaaaatgacataattca 23930254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 11722193 - 11722122
Alignment:
Q  298 cacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||| |||||| |||||||||||||||||||   |||||   ||| ||||||||||||| ||||||||||    
T  11722193 cacggataccggacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatcacataattca 11722122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 369
Target Start/End: Original strand, 26733272 - 26733339
Alignment:
Q  302 gacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||| || ||||||||||||||||||| | |||||   ||||||||||| ||||| ||||||||||    
T  26733272 gacaccagacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattca 26733339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 369
Target Start/End: Complemental strand, 35238251 - 35238208
Alignment:
Q  326 gacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||||  |||||| ||||||||||||||||||||||    
T  35238251 gacacattgacaccgataatattttgagaaaatgacataattca 35238208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 367
Target Start/End: Original strand, 598171 - 598241
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    ||||||||||| || | ||||||||||||||||||| |||||   ||||||||| ||||||| || |||||    
T  598171 acacggacaccagacatgacacggacactgacacatcgacaccgctaataatttaagaaaatcacgtaatt 598241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 9778471 - 9778505
Alignment:
Q  297 acacggacaccggatacgacacggacactgacaca 331  Q
    |||||||||||||| ||||||||||||||||||||    
T  9778471 acacggacaccggacacgacacggacactgacaca 9778505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 369
Target Start/End: Original strand, 24339607 - 24339677
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||| |||||| ||||| ||||||   ||||||  ||||||||||| ||||| ||||||||||    
T  24339607 acggacaccggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcacataattca 24339677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 369
Target Start/End: Complemental strand, 30516431 - 30516381
Alignment:
Q  319 ggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||| | ||||| || |||||||||||||||||| ||||||||    
T  30516431 ggacactgacacgtcgacactaacaataatttgagaaaatgatataattca 30516381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 369
Target Start/End: Complemental strand, 36013872 - 36013822
Alignment:
Q  320 gacactgacacattgacacaaataataatttgag-aaaatgacataattca 369  Q
    ||||||||||||||||||   ||||||||||||| ||||||||||||||||    
T  36013872 gacactgacacattgacaatgataataatttgagaaaaatgacataattca 36013822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 369
Target Start/End: Complemental strand, 36297442 - 36297369
Alignment:
Q  295 acacacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||| |||||||||| |||||||||||| |||||| | |||||   ||||||||| ||||||| ||||||||||    
T  36297442 acacaaggacaccggacacgacacggacattgacac-tcgacacggctaataatttaagaaaatcacataattca 36297369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 364
Target Start/End: Complemental strand, 927907 - 927866
Alignment:
Q  323 actgacacattgacacaaataataatttgagaaaatgacata 364  Q
    |||||||| | ||||| |||||||||||||||||||||||||    
T  927907 actgacacgtcgacactaataataatttgagaaaatgacata 927866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 369
Target Start/End: Original strand, 4909149 - 4909186
Alignment:
Q  332 ttgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  4909149 ttgacaccaataataatttgagaaaattacataattca 4909186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 369
Target Start/End: Complemental strand, 38134467 - 38134430
Alignment:
Q  332 ttgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||  |||||||||||||||||||||||||||||    
T  38134467 ttgacaccgataataatttgagaaaatgacataattca 38134430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 17851394 - 17851466
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||||| |||||| ||| || ||||||| || ||   ||||||||| ||||||| ||||||||||    
T  17851394 acacggacaccggacacgacatggataccgacacatcgataccgctaataattttagaaaatcacataattca 17851466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 21141078 - 21141006
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||| | ||||||||||| | ||||| | ||||| | ||||||||| ||||||| | ||||||||    
T  21141078 acacggacaccgtacacgacacggacgccgacacgtcgacaccactaataatttaagaaaatcatataattca 21141006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Complemental strand, 44172942 - 44172914
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  44172942 ataataatttgagaaaatgacataattca 44172914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 299 - 363
Target Start/End: Original strand, 33303624 - 33303688
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacat 363  Q
    ||||||||| || |||| |||||||||||||||| ||||| ||||||||||||| ||||||||||    
T  33303624 acggacaccagacacgatacggacactgacacatcgacactaataataatttgaaaaaatgacat 33303688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 34595098 - 34595169
Alignment:
Q  298 cacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||||| |||||||||||| ||||||   ||||||| ||||||||||| ||||| ||||||||||    
T  34595098 cacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattca 34595169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 8777069 - 8776997
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||| |||| |||||||||||||||||||   ||||||| ||||||||||| ||||| ||| ||||||    
T  8777069 acacggacaacggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattca 8776997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 16766660 - 16766732
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||||| |||||| ||||||||||||   ||||||  ||||||||||| ||||| ||||||||||    
T  16766660 acacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattca 16766732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 367
Target Start/End: Complemental strand, 426610 - 426540
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    ||||||| |||||| |||||||||||||||||||   ||||||  ||||||||||| ||||| ||||||||    
T  426610 acacggataccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataatt 426540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 369
Target Start/End: Original strand, 1334626 - 1334696
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||| ||||||| ||||| |||||||||||||  |||| | ||||| |||| |||||||||||    
T  1334626 acggacaccggacacgacactgacacagacacattgacacggataaaattttgaaaaaaggacataattca 1334696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 367
Target Start/End: Original strand, 6389706 - 6389776
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||| ||||||||| |||||||||||||| ||||   |||||  |||||||||||||||||||| ||||||    
T  6389706 acacagacaccggacacgacacggacactcacacgccgacacggataataatttgagaaaatgatataatt 6389776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 367
Target Start/End: Original strand, 7625085 - 7625155
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    ||||||||| |||| ||||||| ||||| ||||| | |||||  |||||||||||||||||||| ||||||    
T  7625085 acacggacatcggacacgacacagacaccgacacgtcgacacggataataatttgagaaaatgatataatt 7625155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 368
Target Start/End: Complemental strand, 8365613 - 8365544
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattc 368  Q
    ||||||||| || |||||||||||||||||||   ||||||| ||||||||||| || || |||||||||    
T  8365613 acggacaccagacacgacacggacactgacacgccgacacaactaataatttgaaaatatcacataattc 8365544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 853953 - 853885
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||||||||||| ||||||||||  |||||||   ||||||| ||||||||||| ||||| ||||||||    
T  853953 acggacaccggacacgacacggatgctgacacgccgacacaactaataatttgaaaaaatcacataatt 853885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 369
Target Start/End: Complemental strand, 9024248 - 9024200
Alignment:
Q  321 acactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||| ||||| | ||||||||| ||||||||||||||||||||||||||    
T  9024248 acacggacacgtcgacacaaatgataatttgagaaaatgacataattca 9024200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 9107466 - 9107394
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||||| |||||||||||||| ||||   ||||||  ||||||||||| ||||| ||| ||||||    
T  9107466 acacggacaccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattca 9107394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 364
Target Start/End: Complemental strand, 10760918 - 10760870
Alignment:
Q  316 cacggacactgacacattgacacaaataataatttgagaaaatgacata 364  Q
    ||||||||||||||| | |||||  ||||||||||||||||||||||||    
T  10760918 cacggacactgacacgtcgacactgataataatttgagaaaatgacata 10760870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 368
Target Start/End: Original strand, 9027141 - 9027212
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattc 368  Q
    |||||||| ||||| |||||||||||||||||||   |||||   ||||||||||||| ||| |||||||||    
T  9027141 acacggactccggacacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattc 9027212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 314 - 369
Target Start/End: Original strand, 15443675 - 15443730
Alignment:
Q  314 gacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||| |||||||||| | ||||  ||||||||||||||||||| ||||||||||    
T  15443675 gacacgaacactgacacgtcgacatcaataataatttgagaaaataacataattca 15443730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 369
Target Start/End: Original strand, 19044432 - 19044499
Alignment:
Q  302 gacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||| |||||||| ||||||||||||   ||||| | |||||||||||||| || ||||||||||    
T  19044432 gacaccgaatacgacatggacactgacacgccgacacgactaataatttgagaatatcacataattca 19044499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 306 - 365
Target Start/End: Original strand, 20518317 - 20518376
Alignment:
Q  306 ccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataa 365  Q
    ||||||||||||| |||||||||||| | |||| | ||| ||||||||||||| ||||||    
T  20518317 ccggatacgacacagacactgacacactaacaccactaacaatttgagaaaattacataa 20518376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 367
Target Start/End: Original strand, 7938079 - 7938149
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||||||||||||| |||||| ||||||||||||   ||||||  ||||||||||| ||||| | ||||||    
T  7938079 acacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcatataatt 7938149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 369
Target Start/End: Original strand, 12696297 - 12696359
Alignment:
Q  307 cggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||| |||||||||||||||||||   ||||||  ||||||||||| ||||| ||||||||||    
T  12696297 cggacacgacacggacactgacacgccgacacagctaataatttgaaaaaattacataattca 12696359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 333 - 367
Target Start/End: Original strand, 21385170 - 21385204
Alignment:
Q  333 tgacacaaataataatttgagaaaatgacataatt 367  Q
    |||||| ||||||||||||||||||||||||||||    
T  21385170 tgacacgaataataatttgagaaaatgacataatt 21385204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 33135813 - 33135867
Alignment:
Q  316 cacggacactgacacat-tgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||| ||||||  |||||| ||||||||||||||||||||| ||||||||    
T  33135813 cacggacacagacacaaatgacactaataataatttgagaaaatgatataattca 33135867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 360
Target Start/End: Complemental strand, 7251033 - 7250996
Alignment:
Q  323 actgacacattgacacaaataataatttgagaaaatga 360  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  7251033 actgacacgttgacaccaataataatttgagaaaatga 7250996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 367
Target Start/End: Complemental strand, 13211376 - 13211307
Alignment:
Q  298 cacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    ||||||||| ||| || ||| |||||| ||||| | ||||   |||||||||||||||||||||||||||    
T  13211376 cacggacacgggacaccacaaggacaccgacacgtcgacattgataataatttgagaaaatgacataatt 13211307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 369
Target Start/End: Original strand, 13851714 - 13851771
Alignment:
Q  312 acgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||||||||||| | |||||   ||||||||||||||||| || |||||||    
T  13851714 acgacacggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattca 13851771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 367
Target Start/End: Complemental strand, 25038154 - 25038097
Alignment:
Q  310 atacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    ||||||||| || |||||||| |||||||   ||||||||||||||||| ||||||||    
T  25038154 atacgacacagatactgacacgttgacaccgttaataatttgagaaaattacataatt 25038097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 366
Target Start/End: Original strand, 25096386 - 25096455
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataat 366  Q
    ||||||||| ||||||| |||| ||||| |||||   ||||| | ||||||||||||||||| |||||||    
T  25096386 acacggacatcggatacaacacagacaccgacacgacgacaccactaataatttgagaaaatcacataat 25096455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 369
Target Start/End: Original strand, 34446551 - 34446600
Alignment:
Q  320 gacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||| |||||  ||||||  |||||||||||||||||||||||||||||    
T  34446551 gacacagacactctgacacggataataatttgagaaaatgacataattca 34446600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Complemental strand, 2140533 - 2140505
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  2140533 ataataatttgagaaaatgacataattca 2140505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 367
Target Start/End: Complemental strand, 2153994 - 2153913
Alignment:
Q  284 atgaagcacaaacacacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||||||||||||||  ||||| |||| | ||||||||||| |||||   ||||| || |||||||| ||||||||| ||||||    
T  2153994 atgaagcacaaacac--ggacatcggacatgacacggacaccgacacgccgacacgaacaataatttaagaaaatgatataatt 2153913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 366
Target Start/End: Complemental strand, 4859172 - 4859140
Alignment:
Q  334 gacacaaataataatttgagaaaatgacataat 366  Q
    ||||| |||||||||||||||||||||||||||    
T  4859172 gacaccaataataatttgagaaaatgacataat 4859140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 5000722 - 5000650
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||||| | |||||||| |||||||| | |||||   |||||||| |||||||| |||| |||||    
T  5000722 acacggacaccggacatgacacggatactgacacgtcgacaccgctaataattcgagaaaatcacatgattca 5000650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 7977926 - 7977854
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||| ||| |||||| ||| ||||||||   ||||||  ||||||||||| ||||| ||||||||||    
T  7977926 acacggacactggacacgacatggatactgacacgccgacacagctaataatttgaaaaaattacataattca 7977854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 365
Target Start/End: Complemental strand, 19147479 - 19147431
Alignment:
Q  317 acggacactgacacattgacacaaataataatttgagaaaatgacataa 365  Q
    |||||||||||||||  ||||||  ||||||||||||||||| ||||||    
T  19147479 acggacactgacacacggacacagctaataatttgagaaaatcacataa 19147431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Original strand, 29711269 - 29711297
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  29711269 ataataatttgagaaaatgacataattca 29711297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 367
Target Start/End: Original strand, 33076413 - 33076441
Alignment:
Q  339 aaataataatttgagaaaatgacataatt 367  Q
    |||||||||||||||||||||||||||||    
T  33076413 aaataataatttgagaaaatgacataatt 33076441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 12895368 - 12895300
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    ||||||||||||||||||||| ||| ||||||   ||||||||||||||||||| ||||| ||||||||    
T  12895368 acggacaccggatacgacacgaacaatgacacgccgacacaaataataatttgaaaaaatcacataatt 12895300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 314 - 369
Target Start/End: Complemental strand, 34589785 - 34589730
Alignment:
Q  314 gacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||| |||||||||||||  |||| ||||||||||||||||||||||||    
T  34589785 gacacggacacggacacattgacaccgataacaatttgagaaaatgacataattca 34589730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 23293082 - 23293010
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||||| |||||||||||| ||||||   ||||||  ||||||||||| ||||| ||||||||||    
T  23293082 acacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattca 23293010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 24343470 - 24343542
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||||| ||||||||||| | |||||   |||||  |||||||||||||||||| ||||||||||    
T  24343470 acacggacaccggacacgacacggacgccgacacgccgacacggataataatttgagaaaattacataattca 24343542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 367
Target Start/End: Complemental strand, 27706273 - 27706203
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    ||||||||||| || |||||| |||||||||||| | ||||||| ||||||||| | ||||| ||||||||    
T  27706273 acacggacaccagacacgacagggacactgacacgtcgacacaattaataatttaaaaaaatcacataatt 27706203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 369
Target Start/End: Original strand, 48845126 - 48845176
Alignment:
Q  320 gacactgacacattgacac-aaataataatttgagaaaatgacataattca 369  Q
    ||||||||||| | ||||| |||||||||||||||||||||||||||||||    
T  48845126 gacactgacacttggacacgaaataataatttgagaaaatgacataattca 48845176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 369
Target Start/End: Complemental strand, 19230381 - 19230333
Alignment:
Q  321 acactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||| |||| | |||||||||||||||||| ||||||||||    
T  19230381 acactgacacatggacatagataataatttgagaaaataacataattca 19230333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 36635287 - 36635359
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||| ||||||||| ||||| |||||||||||||    |||| | ||||||||||||||||| ||||||||||    
T  36635287 acacagacaccggacacgactcggacactgacacgccaacaccactaataatttgagaaaatcacataattca 36635359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 314 - 369
Target Start/End: Original strand, 7012046 - 7012101
Alignment:
Q  314 gacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||| |||||   |||||  |||||||||||||||||||||||||||||    
T  7012046 gacacggacaccgacacgccgacaccgataataatttgagaaaatgacataattca 7012101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 21945467 - 21945538
Alignment:
Q  298 cacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||||| | ||||| ||||||||||    ||||||  ||||||||||| ||||||||||||||||    
T  21945467 cacggacaccggacatgacacagacactgacatgccgacacagctaataatttgaaaaaatgacataattca 21945538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 314 - 369
Target Start/End: Complemental strand, 40179715 - 40179660
Alignment:
Q  314 gacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||||||||| ||||||| | ||||| ||||| ||||| ||||||||||    
T  40179715 gacacggacactgacacgttgacaccattaatagtttgaaaaaatcacataattca 40179660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 367
Target Start/End: Complemental strand, 35158081 - 35158011
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||||||||||||| || ||||||||||||||||   ||| ||| ||||||||||  ||||| ||||||||    
T  35158081 acacggacaccggacacaacacggacactgacacgccgacgcaactaataatttggaaaaatcacataatt 35158011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 369
Target Start/End: Complemental strand, 22440681 - 22440624
Alignment:
Q  312 acgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||| ||||||||| |||| |||||   ||||||||||||||||| ||||||||||    
T  22440681 acgacatggacactgatacatcgacaccgttaataatttgagaaaatcacataattca 22440624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 369
Target Start/End: Complemental strand, 31243613 - 31243572
Alignment:
Q  328 cacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||| |||||  |||||||||||||||||||||||||||||    
T  31243613 cacatcgacacttataataatttgagaaaatgacataattca 31243572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 369
Target Start/End: Original strand, 37496690 - 37496739
Alignment:
Q  320 gacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||| |||||||  |||||  ||||||||||||||||||||||    
T  37496690 gacactgacacgttgacaccgataattttttgagaaaatgacataattca 37496739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Complemental strand, 5654643 - 5654615
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  5654643 ataataatttgagaaaatgacataattca 5654615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 360
Target Start/End: Original strand, 7367539 - 7367579
Alignment:
Q  320 gacactgacacattgacacaaataataatttgagaaaatga 360  Q
    |||||| |||||| ||||| |||||||||||||||||||||    
T  7367539 gacactaacacatagacaccaataataatttgagaaaatga 7367579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Original strand, 10546155 - 10546183
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  10546155 ataataatttgagaaaatgacataattca 10546183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Complemental strand, 14465346 - 14465318
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  14465346 ataataatttgagaaaatgacataattca 14465318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Complemental strand, 18513293 - 18513265
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  18513293 ataataatttgagaaaatgacataattca 18513265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 369
Target Start/End: Complemental strand, 20521941 - 20521873
Alignment:
Q  301 ggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||| || |||||||||||||||||||   || ||  |||||||||||| ||||| ||||||||||    
T  20521941 ggacaccagacacgacacggacactgacacgccgataccgataataatttgataaaatcacataattca 20521873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Complemental strand, 20743330 - 20743302
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  20743330 ataataatttgagaaaatgacataattca 20743302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Original strand, 32910558 - 32910586
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  32910558 ataataatttgagaaaatgacataattca 32910586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Original strand, 43188619 - 43188647
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  43188619 ataataatttgagaaaatgacataattca 43188647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 360
Target Start/End: Original strand, 48557611 - 48557651
Alignment:
Q  320 gacactgacacattgacacaaataataatttgagaaaatga 360  Q
    ||||||||||||||||||| | ||| |||||||||||||||    
T  48557611 gacactgacacattgacactagtaaaaatttgagaaaatga 48557651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 53968509 - 53968581
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||| |||||||||||  ||||  ||||   || || ||||||||||| ||||||||||||||||||    
T  53968509 acacggacacaggatacgacacaaacaccaacacgccgataccaataataatttaagaaaatgacataattca 53968581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 1486805 - 1486733
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||| ||||||||||||||||| ||||||||  |||||||  ||||||||||| ||||| ||||||||||    
T  1486805 acacggataccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattca 1486733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 366
Target Start/End: Complemental strand, 22794178 - 22794105
Alignment:
Q  293 aaacacacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataat 366  Q
    ||||||||||| |||||||||||||  ||||||||||| |  ||||  |||||||||||| |||||||||||||    
T  22794178 aaacacacggataccggatacgacatagacactgacacgtcaacacggataataatttgaaaaaatgacataat 22794105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 34298399 - 34298471
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||| ||||| || |||||||||| |||||||||  ||||| | ||||||||||||||||| ||||||||||    
T  34298399 acacgtacaccagacacgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattca 34298471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 312 - 367
Target Start/End: Complemental strand, 7779641 - 7779587
Alignment:
Q  312 acgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||||||| ||||||||||||| |||||||||||||||| | ||||||||||||||    
T  7779641 acgacacgaacactgacacattaacacaaataataatttta-aaaatgacataatt 7779587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 314 - 369
Target Start/End: Original strand, 16812523 - 16812578
Alignment:
Q  314 gacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||||||||||  ||||| ||||||||||||| ||||| ||||||||||    
T  16812523 gacacggacactgacacaccgacaccaataataatttgacaaaatcacataattca 16812578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 302 - 369
Target Start/End: Complemental strand, 20157441 - 20157374
Alignment:
Q  302 gacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||| ||||||||| ||||||||||| |||||   ||||||| ||||||||| ||||||||||    
T  20157441 gacaccggacacgacacgggcactgacacatcgacaccgctaataatgtgagaaaatcacataattca 20157374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 369
Target Start/End: Complemental strand, 398858 - 398789
Alignment:
Q  300 cggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||| |||||||||||||||||||   |||||   ||||||||||| ||||| ||||||||||    
T  398858 cggacaccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattca 398789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 368
Target Start/End: Complemental strand, 10572683 - 10572614
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattc 368  Q
    |||||||||||| |||||| | ||||||||||   ||||| | ||||||||||||||||| |||||||||    
T  10572683 acggacaccggacacgacatgaacactgacacgccgacaccactaataatttgagaaaatcacataattc 10572614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 352
Target Start/End: Complemental strand, 48040556 - 48040503
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttga 352  Q
    |||||||||||| |||||||||||||||||||   |||||| ||||||||||||    
T  48040556 acggacaccggacacgacacggacactgacacgccgacacagataataatttga 48040503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 369
Target Start/End: Complemental strand, 7918303 - 7918235
Alignment:
Q  301 ggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||| ||||||| |||| ||||||  |||||  | ||||||||||||||||| ||||||||||    
T  7918303 ggacaccggacacgacacagacaatgacacgctgacatcactaataatttgagaaaatcacataattca 7918235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 2896216 - 2896145
Alignment:
Q  298 cacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||| |||| || ||||||||||||||||   |||||   ||||||||||||||||| ||||||||||    
T  2896216 cacggacaacggacacaacacggacactgacacgccgacaccgctaataatttgagaaaatcacataattca 2896145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 369
Target Start/End: Original strand, 1262849 - 1262919
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||| |||||| |||||||| |||| |||||   ||||||  ||||||||||||||||| ||||||||||    
T  1262849 acggataccggacacgacacgaacacggacacgccgacacagctaataatttgagaaaatcacataattca 1262919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 367
Target Start/End: Original strand, 15323126 - 15323196
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||||||||||||| |||||| |||||||||||  | || |||  ||||||||||| ||||| ||||||||    
T  15323126 acacggacaccggacacgacatggacactgacatgtcgatacagttaataatttgaaaaaatcacataatt 15323196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 367
Target Start/End: Original strand, 43328454 - 43328500
Alignment:
Q  321 acactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||||||||| |||||||  |||||||||||||||||||| ||||||    
T  43328454 acactgacacgttgacacttataataatttgagaaaatgaaataatt 43328500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 369
Target Start/End: Original strand, 3921673 - 3921702
Alignment:
Q  340 aataataatttgagaaaatgacataattca 369  Q
    ||||||||||||||||||||||||||||||    
T  3921673 aataataatttgagaaaatgacataattca 3921702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 358
Target Start/End: Original strand, 40917714 - 40917775
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaat 358  Q
    |||||||||||||| |||||||||| ||||||||   ||||||  ||||||||||| |||||    
T  40917714 acacggacaccggacacgacacggatactgacacgccgacacagctaataatttgaaaaaat 40917775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 5927434 - 5927366
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||||||||||| |||||||||||||||||||  | ||||   ||||||||||| ||||| | ||||||    
T  5927434 acggacaccggacacgacacggacactgacacgctaacactgctaataatttgaaaaaatcatataatt 5927366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 6612267 - 6612195
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||| |||||||| |||||||||||| ||||||   || |||  ||||||||||| ||||| ||||||||||    
T  6612267 acacgaacaccggacacgacacggacaatgacacgccgatacagttaataatttgaaaaaattacataattca 6612195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 365
Target Start/End: Original strand, 8203809 - 8203852
Alignment:
Q  321 acactgacacattgacacaaataataatttgagaaaatgacataa 365  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||    
T  8203809 acactgacacattgactcaa-tcataatttgagaaaatgacataa 8203852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Original strand, 11571592 - 11571620
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  11571592 ataataatttgagaaaatgacataattca 11571620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Complemental strand, 40747825 - 40747797
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  40747825 ataataatttgagaaaatgacataattca 40747797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Original strand, 42325567 - 42325595
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  42325567 ataataatttgagaaaatgacataattca 42325595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 42359545 - 42359473
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||| |||||| | || ||||||||||||||||  |||||||  ||||||||||| ||||| ||| ||||||    
T  42359545 acacgaacaccgtacacaacacggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattca 42359473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 326 - 369
Target Start/End: Complemental strand, 34201113 - 34201070
Alignment:
Q  326 gacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  34201113 gacacattgacactaataataatttgagaaaatgacataattca 34201070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 22651939 - 22652011
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||| ||||||||| |||||||||||||||||||   ||||||  ||||||||||| ||||| ||||||||||    
T  22651939 acactgacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattca 22652011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 369
Target Start/End: Original strand, 28642373 - 28642443
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||| |||| |||||||||||| ||||||||||||||   ||||||||||| ||| | ||||||||||    
T  28642373 acggacatcggacacgacacggacaatgacacattgacacggttaataatttgaaaaatttacataattca 28642443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 366
Target Start/End: Original strand, 44067479 - 44067548
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataat 366  Q
    ||||||||||| || || |||| |||||||||||   |||||  ||||||||||||||||||||||||||    
T  44067479 acacggacaccagacaccacaccgacactgacacgccgacacggataataatttgagaaaatgacataat 44067548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 14692443 - 14692494
Alignment:
Q  317 acggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||||||  ||||||| ||||||||||||| |||||||||||||||    
T  14692443 acggacactgacactctgacacagataataatttgag-aaatgacataattca 14692494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 369
Target Start/End: Complemental strand, 29510396 - 29510328
Alignment:
Q  301 ggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||| |||||||||||||||||||   ||||||  ||||||||||| ||||| ||| ||||||    
T  29510396 ggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattca 29510328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 11815815 - 11815854
Alignment:
Q  320 gacactgacacattgacacaaataataatttgagaaaatg 359  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  11815815 gacactgacacgttgacaccaataataatttgagaaaatg 11815854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 18170577 - 18170506
Alignment:
Q  298 cacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||| |||||  |||||||||||||||||||   ||||||| ||| ||||||| ||||| ||||||||||    
T  18170577 cacggataccggtcacgacacggacactgacacgccgacacaattaaaaatttgaaaaaattacataattca 18170506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 18634145 - 18634074
Alignment:
Q  298 cacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||| |||||  |||||||||||||||||||   ||||||| ||| ||||||| ||||| ||||||||||    
T  18634145 cacggataccggtcacgacacggacactgacacgccgacacaattaaaaatttgaaaaaattacataattca 18634074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 334 - 369
Target Start/End: Original strand, 40063951 - 40063986
Alignment:
Q  334 gacacaaataataatttgagaaaatgacataattca 369  Q
    ||||| ||||||||||||||||||||||||||||||    
T  40063951 gacaccaataataatttgagaaaatgacataattca 40063986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 367
Target Start/End: Complemental strand, 2572152 - 2572082
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||||||||| ||| |||||||||| || ||||| | ||||||  ||||||||||| ||||| ||||||||    
T  2572152 acacggacactggacacgacacggataccgacacgtcgacacacctaataatttgaaaaaatcacataatt 2572082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 369
Target Start/End: Complemental strand, 24362296 - 24362226
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||| ||||| |||||   |||||   ||||||||||||| ||| ||||||||||    
T  24362296 acggacaccggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatcacataattca 24362226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 369
Target Start/End: Complemental strand, 25192441 - 25192371
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||| |||| |||| ||||||||||||||   ||||||  ||||||||||| ||| ||||||||||||    
T  25192441 acggacatcggacacgatacggacactgacacgccgacacagctaataatttgaaaaagtgacataattca 25192371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 367
Target Start/End: Original strand, 39820392 - 39820462
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||| ||||||||| ||||||| ||||| |||||  |||| |  |||||||||||||||||||| ||||||    
T  39820392 acacagacaccggacacgacacagacaccgacacgctgacccgtataataatttgagaaaatgatataatt 39820462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 330
Target Start/End: Complemental strand, 926884 - 926851
Alignment:
Q  297 acacggacaccggatacgacacggacactgacac 330  Q
    |||||||||||||| |||||||||||||||||||    
T  926884 acacggacaccggacacgacacggacactgacac 926851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 367
Target Start/End: Original strand, 13845234 - 13845267
Alignment:
Q  334 gacacaaataataatttgagaaaatgacataatt 367  Q
    ||||||||||||||||||||||||||| ||||||    
T  13845234 gacacaaataataatttgagaaaatgatataatt 13845267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 361
Target Start/End: Complemental strand, 14943170 - 14943129
Alignment:
Q  320 gacactgacacattgacacaaataataatttgagaaaatgac 361  Q
    ||||||||||||||||||| ||||| | ||||||||||||||    
T  14943170 gacactgacacattgacaccaataaaattttgagaaaatgac 14943129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 24413656 - 24413583
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataa-tttgagaaaatgacataattca 369  Q
    ||||||||||| || |||||||||||||||||| | ||||||   |||||| ||||||||||  ||||||||||    
T  24413656 acacggacaccagacacgacacggacactgacatactgacaccgttaataattttgagaaaaatacataattca 24413583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 369
Target Start/End: Complemental strand, 28883931 - 28883902
Alignment:
Q  340 aataataatttgagaaaatgacataattca 369  Q
    ||||||||||||||||||||||||||||||    
T  28883931 aataataatttgagaaaatgacataattca 28883902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 369
Target Start/End: Complemental strand, 13437056 - 13436988
Alignment:
Q  301 ggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||| | |||| ||||||||||||   ||||||  ||||||||||| ||||| ||||||||||    
T  13437056 ggacaccggacatgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattca 13436988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 367
Target Start/End: Original strand, 20873042 - 20873102
Alignment:
Q  307 cggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||| |||||||||||||||||||   |||| | |||||||||||| ||||| ||||||||    
T  20873042 cggacacgacacggacactgacacgccgacatagataataatttgaaaaaatcacataatt 20873102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Complemental strand, 30068080 - 30068052
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  30068080 ataataatttgagaaaatgacataattca 30068052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 297 - 367
Target Start/End: Complemental strand, 23354748 - 23354678
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||||||||||||| | ||||||||||| ||||   ||||||| |||||||||||||||||||| ||||||    
T  23354748 acacggacaccggacatgacacggacaccgacatgctgacacagataataatttgagaaaatgatataatt 23354678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 369
Target Start/End: Complemental strand, 12941016 - 12940959
Alignment:
Q  312 acgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||||||||||| ||||||||| ||||||||||| ||||| | ||||||||    
T  12941016 acgacacggacactgacacgttgacacaactaataatttgaaaaaatcatataattca 12940959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 15972836 - 15972908
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||| |||||| ||||||||||||||||||||||   ||||||| ||||||||||| ||||| ||| ||||||    
T  15972836 acacagacaccagatacgacacggacactgacacgccgacacaattaataatttgaaaaaattacacaattca 15972908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 36756440 - 36756368
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||| ||| |||||||||||| ||||||||||| | ||||||| |||||||||||  |||| ||||||||||    
T  36756440 acacgaacatcggatacgacacagacactgacacgtcgacacaactaataatttgaagaaataacataattca 36756368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 367
Target Start/End: Complemental strand, 18841099 - 18841039
Alignment:
Q  307 cggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||| |||||| ||||||||||||  |||||||| ||||||||||| ||||| ||||||||    
T  18841099 cggacacgacatggacactgacacgctgacacaactaataatttgaaaaaattacataatt 18841039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 20539768 - 20539700
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||||||| ||| ||||||||||||||||||| | ||||||  ||||||||||| ||||| | ||||||    
T  20539768 acggacactggacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatt 20539700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 23355089 - 23355021
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||||||| ||| | ||||||||||| ||||   ||||||| |||||||||||||||||||| ||||||    
T  23355089 acggacacgggacatgacacggacaccgacatgctgacacagataataatttgagaaaatgatataatt 23355021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 369
Target Start/End: Original strand, 18421931 - 18421998
Alignment:
Q  302 gacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||| ||||||||||||||||||||||||   ||||||| ||||||||| | || || ||||||||||    
T  18421931 gacatcggatacgacacggacactgacacgccgacacaattaataatttaaaaatatcacataattca 18421998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 369
Target Start/End: Complemental strand, 19536492 - 19536421
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttg-agaaaatgacataattca 369  Q
    |||||||||||| |||||||||||| ||||||   ||||||| |||||||||| | ||||| ||||||||||    
T  19536492 acggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaaatcacataattca 19536421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 367
Target Start/End: Complemental strand, 34785078 - 34785008
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    |||||||| || || ||||||||||||||||||||  ||||||| ||||  ||| ||||||| ||||||||    
T  34785078 acacggaccccagacacgacacggacactgacacaccgacacaactaatttttttagaaaatcacataatt 34785008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 369
Target Start/End: Original strand, 39399881 - 39399947
Alignment:
Q  303 acaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||| || |||||| ||||||||||||||||||||  || | | ||| ||||||||||||||||||    
T  39399881 acaccagacacgacatggacactgacacattgacaccgatgaaatttttagaaaatgacataattca 39399947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 369
Target Start/End: Original strand, 10254005 - 10254062
Alignment:
Q  312 acgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||||||  |||||  |||| ||||||||||  ||||||||||||||||||    
T  10254005 acgacacggacactaccacatcaacactaataataattgtagaaaatgacataattca 10254062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 368
Target Start/End: Original strand, 11670720 - 11670789
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattc 368  Q
    |||||||||| ||||||||  ||||||||||| | ||| | | ||||||||||| ||||| |||||||||    
T  11670720 acggacaccgaatacgacatagacactgacacgtcgacgccactaataatttgaaaaaatcacataattc 11670789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Complemental strand, 10535811 - 10535783
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  10535811 ataataatttgagaaaatgacataattca 10535783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 15657827 - 15657899
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||| ||||||| |||||||||||||| ||||   ||| ||| ||||||||||  ||||| ||||||||||    
T  15657827 acacggtcaccggacacgacacggacactaacacgccgactcaactaataatttgtaaaaatcacataattca 15657899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Original strand, 18570979 - 18571007
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  18570979 ataataatttgagaaaatgacataattca 18571007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 28412313 - 28412385
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||| || |||||||||||||| |||| |  ||||   ||||||||||| ||||| ||||||||||    
T  28412313 acacggacaccagacacgacacggacactaacacgtcaacaccgttaataatttgataaaatcacataattca 28412385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Original strand, 30563416 - 30563444
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  30563416 ataataatttgagaaaatgacataattca 30563444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 369
Target Start/End: Original strand, 37497107 - 37497155
Alignment:
Q  321 acactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||| |||||  ||||||||||||||||||| || ||||||    
T  37497107 acactgacacatcgacactgataataatttgagaaaatgccacaattca 37497155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Original strand, 40681989 - 40682017
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  40681989 ataataatttgagaaaatgacataattca 40682017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 369
Target Start/End: Complemental strand, 43586097 - 43586029
Alignment:
Q  301 ggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||| |||  || ||||||||||| |  ||||| |||| | ||||||||||||||||||||||    
T  43586097 ggacaccggacacggtactgacactgacacgtcaacacagataaaattttgagaaaatgacataattca 43586029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 369
Target Start/End: Original strand, 20137 - 20207
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||| |||||||||||| ||||||   ||||||  ||||||||||| ||||| ||||||||||    
T  20137 acggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattca 20207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 358
Target Start/End: Original strand, 8761 - 8822
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaat 358  Q
    |||||||||||||| |||||||||||||||||||   ||||||  ||||||||||| |||||    
T  8761 acacggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 8822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 241558 - 241627
Alignment:
Q  298 cacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataatt 367  Q
    ||||||||||||| |||||||||||||||||||   ||||||  ||||||||||  ||||| ||||||||    
T  241558 cacggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcacataatt 241627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 365
Target Start/End: Original strand, 21006 - 21074
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataa 365  Q
    ||||||||||| || ||||||||||||||||||   ||||||   ||||||||||||||||| ||||||    
T  21006 acacggacaccagacacgacacggacactgacatgctgacacggttaataatttgagaaaatcacataa 21074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 46645 - 46717
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||| |||| |||||||||||| ||||||   ||||||  ||||||||||| ||||| ||||||||||    
T  46645 acacggacatcggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattca 46717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 358
Target Start/End: Complemental strand, 178910 - 178854
Alignment:
Q  302 gacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaat 358  Q
    ||||||||| |||||||||||||||||||   ||||||| ||||||||||| |||||    
T  178910 gacaccggacacgacacggacactgacacgccgacacaactaataatttgaaaaaat 178854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 263468 - 263396
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||| ||||||||||||||||||||||  |  ||||   ||||||||||||||||  ||||||||||    
T  263468 acacggacactggatacgacacggacactgacatgtcaacactgctaataatttgagaaaaccacataattca 263396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 314 - 369
Target Start/End: Complemental strand, 8132 - 8077
Alignment:
Q  314 gacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    ||||||||||| ||||| | || ||  |||||||||||||||||||||||||||||    
T  8132 gacacggacaccgacacgtcgatacggataataatttgagaaaatgacataattca 8077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 368
Target Start/End: Complemental strand, 135406 - 135337
Alignment:
Q  299 acggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattc 368  Q
    |||||||||| ||||||||| |||||  |||||  |||||   ||||||||||||||||| |||||||||    
T  135406 acggacaccgaatacgacacagacaccaacacaccgacactgctaataatttgagaaaatcacataattc 135337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 369
Target Start/End: Original strand, 7697 - 7725
Alignment:
Q  341 ataataatttgagaaaatgacataattca 369  Q
    |||||||||||||||||||||||||||||    
T  7697 ataataatttgagaaaatgacataattca 7725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 8629 - 8701
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||||| |||||| |||||||||||| | |||||   |||||||||  |||||| ||||| ||||    
T  8629 acacggacaccggacacgacatggacactgacacgtcgacacttctaataatttaggaaaatcacatagttca 8701  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 130445 - 130517
Alignment:
Q  297 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 369  Q
    |||||||||||||| |||||||||||| |||||    ||||||  ||||| ||||| ||||| ||||||||||    
T  130445 acacggacaccggacacgacacggacaatgacaagccgacacagttaatagtttgaaaaaatcacataattca 130517  T

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