View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7508_high_7 (Length: 490)
Name: NF7508_high_7
Description: NF7508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7508_high_7 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 307; Significance: 1e-173; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 136 - 457
Target Start/End: Original strand, 45338514 - 45338836
Alignment:
| Q |
136 |
gtgttggagattgatatttttctgatttaataattaattgtgttgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagttag |
235 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45338514 |
gtgttggagattgatatttttctgatttaataattaattgtgttgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagttag |
45338613 |
T |
|
| Q |
236 |
attgttgcttatttggtaagtaagagtcctaggtaatgatatctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagattttatg |
335 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45338614 |
attgttgcttatttggtaagtaagagtcctaggtaatgatatctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagattttatg |
45338713 |
T |
|
| Q |
336 |
tttagtcttacaagcaagcttatggcttggctctatatatttgtagtgtatgcttaagtttaatgtatcaaagtatcttagcttttagtac-ttgttcac |
434 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
45338714 |
tttagtcttacaagcaagcttatggcttggctctatatatttgtattgtatgcttaagtttaatgtatcaaagtatcttagcttttagtactttgttcac |
45338813 |
T |
|
| Q |
435 |
aaaacattgttgtcttctctaac |
457 |
Q |
| |
|
|||||||||||||||||| |||| |
|
|
| T |
45338814 |
aaaacattgttgtcttctttaac |
45338836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 136 - 457
Target Start/End: Original strand, 45336202 - 45336524
Alignment:
| Q |
136 |
gtgttggagattgatatttttctgatttaataattaattgtgttgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagttag |
235 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
45336202 |
gtgttggagattgatatttttctgatttaataattaattgtgttgttattttctgtcataattaatgtgttgcttgtgtaagtttaagtgtcatatttag |
45336301 |
T |
|
| Q |
236 |
attgttgcttatttggtaagtaagagtcctaggtaatgatatctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagattttatg |
335 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45336302 |
attgttgcttatttggtaagtaagagtcctaggtaatgatatctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagattttatg |
45336401 |
T |
|
| Q |
336 |
tttagtcttacaagcaagcttatggcttggctctatatatttgtagtgtatgcttaagtttaatgtatcaaagtatcttagcttttagtac-ttgttcac |
434 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
45336402 |
tttagtcttacaagcaagcttatggcttggctctatatatttgtattgtatgcttaagtttaatgtatcaaagtatcttagcttttagtactttgttcac |
45336501 |
T |
|
| Q |
435 |
aaaacattgttgtcttctctaac |
457 |
Q |
| |
|
|||||||||||||||||| |||| |
|
|
| T |
45336502 |
aaaacattgttgtcttctttaac |
45336524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 137 - 456
Target Start/End: Original strand, 17648811 - 17649135
Alignment:
| Q |
137 |
tgttggagattgatatttttctgatttaataattaattgtgt--tg-ttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagtt |
233 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||| |||||| || | |||||||||||||||| ||||||||||||||||| | ||||||| || |
|
|
| T |
17648811 |
tgttggagattgatatttttctgttttgttaattacttgtgtgctgctgtttttctgtcataattagcttgttgcttgtttaagtt--aatgtcataatt |
17648908 |
T |
|
| Q |
234 |
agattgttgcttatttggtaagt--aagagtcc-taggtaatgatatctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagatt |
330 |
Q |
| |
|
||||||||||||||| ||| || || ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
17648909 |
agattgttgcttattaagtatgtaaaatagtccttaggtaatgatgtctaatattcttaggtaatgatgactagtgtttagagtagatttagtgcatatt |
17649008 |
T |
|
| Q |
331 |
ttatgtttagtcttacaagcaagcttatggcttggctctatatatttgtagtgtatgcttaagtttaatgtatcaaagtatcttagcttttagtac-ttg |
429 |
Q |
| |
|
||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||| || | |||||||||||||||||||| |||| ||| ||| |
|
|
| T |
17649009 |
ttatgttcaatcttacaagcaagcttatggcttggctctatatatttgttatgtatgcttcagctaaatgtatcaaagtatcttagttttttttactttg |
17649108 |
T |
|
| Q |
430 |
ttcacaaaacattgttgtcttctctaa |
456 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
17649109 |
ttcacaaaacattgttgtcttctctaa |
17649135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 184 - 456
Target Start/End: Original strand, 14662318 - 14662594
Alignment:
| Q |
184 |
ttttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagttagattgttgcttatttggtaagtaaga--gtcc-taggtaatgatatcta |
280 |
Q |
| |
|
||||||||||||||||| |||||||||||||| || ||||||||||| |||||| ||||||||||| |||||||| | |||| ||||||||||| |||| |
|
|
| T |
14662318 |
ttttctgtcataattaaagtgttgcttgtttatgtataagtgtcataattagatcgttgcttatttagtaagtaaaacagtccctaggtaatgatgtcta |
14662417 |
T |
|
| Q |
281 |
tggttcttaggtaatgatgactagtgttta-gagtagatttagtgcagattttatgtttagtcttacaagcaagcttatggcttggctctatatatttgt |
379 |
Q |
| |
|
| ||| |||||||| |||||||||| ||| |||||||||| |||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
14662418 |
ttgttgctaggtaataatgactagtgcttaagagtagatttcgtgcagatcttatgttcagttttacaagcaagtttatggcttggctctatatatttgt |
14662517 |
T |
|
| Q |
380 |
agtgtatgcttaagtttaatgtatcaaagtatcttagcttttagtac-ttgttcacaaaacattgttgtcttctctaa |
456 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||||||||||| |
|
|
| T |
14662518 |
agtgtatgcttcagtttaatgtatcaaagtatcttag-tttttttactttgttcctaaaacattgttgtcttctctaa |
14662594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 24142552 - 24142660
Alignment:
| Q |
19 |
gttggattgtatctgaacaggcttccagaaaaaatatctcggctattaagtagataccagagatccctgcaaaatttaggtcacaattttaattggccaa |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24142552 |
gttggattgtatctgaacaggcttccagaaaaaatatctcggctattaagtagattccggagatccctgcaaaatttaggtcacaattttaattggccaa |
24142651 |
T |
|
| Q |
119 |
gactagaga |
127 |
Q |
| |
|
||||||||| |
|
|
| T |
24142652 |
gactagaga |
24142660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 292 - 421
Target Start/End: Original strand, 1454025 - 1454155
Alignment:
| Q |
292 |
taatgatgactagtgtttagagtagatttagtgcaga-ttttatgtttagtcttacaagcaagcttatggcttggctctatatatttgtagtgtatgctt |
390 |
Q |
| |
|
||||||||||||||||||| | |||||||| |||||| |||||| || | | ||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1454025 |
taatgatgactagtgtttaaaatagatttactgcagagttttattttcaattttacaagaaagcttatggcttggctctatatatttgtagtgtatgctt |
1454124 |
T |
|
| Q |
391 |
aagtttaatgtatcaaagtatcttagctttt |
421 |
Q |
| |
|
||||||||||||||||||||||||| |||| |
|
|
| T |
1454125 |
cagtttaatgtatcaaagtatcttagatttt |
1454155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 291 - 409
Target Start/End: Original strand, 132764 - 132882
Alignment:
| Q |
291 |
gtaatgatgactagtgtttagagtagatttagtgcagattttatgtttagtcttacaagcaagcttatggcttggctctatatatttgtagtgtatgctt |
390 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||||||||| || || ||||||||| ||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
132764 |
gtaatgatggctagtgtttagagtagatttattgcagatttgattttcagtcttacaggcagacttatggcttgcctctatatatttgtagtgtatgctt |
132863 |
T |
|
| Q |
391 |
aagtttaatgtatcaaagt |
409 |
Q |
| |
|
||||| |||||| ||||| |
|
|
| T |
132864 |
cagtttgatgtattaaagt |
132882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 303; Significance: 1e-170; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 136 - 457
Target Start/End: Original strand, 32800261 - 32800583
Alignment:
| Q |
136 |
gtgttggagattgatatttttctgatttaataattaattgtgttgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagttag |
235 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
32800261 |
gtgttggagattgatatttttctgatttaataattaattgtgttgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcataattag |
32800360 |
T |
|
| Q |
236 |
attgttgcttatttggtaagtaagagtcctaggtaatgatatctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagattttatg |
335 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32800361 |
attgttgcttatttggtaagtaagagtcctaggtaatgatatctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagattttatg |
32800460 |
T |
|
| Q |
336 |
tttagtcttacaagcaagcttatggcttggctctatatatttgtagtgtatgcttaagtttaatgtatcaaagtatcttagcttttagtac-ttgttcac |
434 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
32800461 |
tttagtcttacaagcaagcttatggcttggctctatatatttgtattgtatgcttaagtttaatgtatcaaagtatcttagcttttagtactttgttcac |
32800560 |
T |
|
| Q |
435 |
aaaacattgttgtcttctctaac |
457 |
Q |
| |
|
|||||||||||||||||| |||| |
|
|
| T |
32800561 |
aaaacattgttgtcttctttaac |
32800583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 137 - 457
Target Start/End: Original strand, 32797950 - 32798271
Alignment:
| Q |
137 |
tgttggagattgatatttttctgatttaataattaattgtgttgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagttaga |
236 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
32797950 |
tgttggagattgatatttttctgatttaataattaattgtgttgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcataattaga |
32798049 |
T |
|
| Q |
237 |
ttgttgcttatttggtaagtaagagtcctaggtaatgatatctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagattttatgt |
336 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32798050 |
ttgttgcttatttggtaagtaagagtcctaggtaatgatatctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagattttatgt |
32798149 |
T |
|
| Q |
337 |
ttagtcttacaagcaagcttatggcttggctctatatatttgtagtgtatgcttaagtttaatgtatcaaagtatcttagcttttagtac-ttgttcaca |
435 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
32798150 |
ttagtcttacaagcaagcttatggcttggctctatatatttgtattgtatgcttaagtttaatgtatcaaagtatcttagcttttagtactttgttcaca |
32798249 |
T |
|
| Q |
436 |
aaacattgttgtcttctctaac |
457 |
Q |
| |
|
||||||||||||||||| |||| |
|
|
| T |
32798250 |
aaacattgttgtcttctttaac |
32798271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 299; Significance: 1e-168; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 136 - 457
Target Start/End: Original strand, 44734095 - 44734417
Alignment:
| Q |
136 |
gtgttggagattgatatttttctgatttaataattaattgtgttgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagttag |
235 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44734095 |
gtgttggagattgatatttttctgatttaaaaattaattgtgttgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagttag |
44734194 |
T |
|
| Q |
236 |
attgttgcttatttggtaagtaagagtcctaggtaatgatatctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagattttatg |
335 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44734195 |
gttgttgcttatttggtaagtaagagtcctaggtaatgatgtctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagattttatg |
44734294 |
T |
|
| Q |
336 |
tttagtcttacaagcaagcttatggcttggctctatatatttgtagtgtatgcttaagtttaatgtatcaaagtatcttagcttttagtac-ttgttcac |
434 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
44734295 |
tttagtcttacaagcaagcttatggcttgactctatatatttgtagtgtatgcttaagtttaatgtatcaaagtatcttagcttttagtactttgttcac |
44734394 |
T |
|
| Q |
435 |
aaaacattgttgtcttctctaac |
457 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
44734395 |
aaaacattgttgtcttctctaac |
44734417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 138 - 457
Target Start/End: Original strand, 44731786 - 44732106
Alignment:
| Q |
138 |
gttggagattgatatttttctgatttaataattaattgtgttgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagttagat |
237 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44731786 |
gttggagattgatatttttctgatttaaaaattaattgtgttgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagttagat |
44731885 |
T |
|
| Q |
238 |
tgttgcttatttggtaagtaagagtcctaggtaatgatatctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagattttatgtt |
337 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44731886 |
tgttgcttatttggtaagtaagagtcctaggtaatgatgtatatggttcttaggtgatgatgactagtgtttagagtagatttagtgcagattttatgtt |
44731985 |
T |
|
| Q |
338 |
tagtcttacaagcaagcttatggcttggctctatatatttgtagtgtatgcttaagtttaatgtatcaaagtatcttagcttttagtac-ttgttcacaa |
436 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
44731986 |
tagtcttacaagcaagcttatggcttgactctatatatttgtagtgtatgcttaagtttaatgtatcaaagtatcttagcttttagtacttttttcacaa |
44732085 |
T |
|
| Q |
437 |
aacattgttgtcttctctaac |
457 |
Q |
| |
|
||||| |||||||||||||| |
|
|
| T |
44732086 |
aacatcattgtcttctctaac |
44732106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 296; Significance: 1e-166; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 136 - 457
Target Start/End: Original strand, 1550099 - 1550422
Alignment:
| Q |
136 |
gtgttggagattgatatttttctgatttaataattaattgtgttgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagttag |
235 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
1550099 |
gtgttggagattgatatttttctgatttaataattaattgtgttgttattttatgtcataattaatgtgttgcttgtataagtttaagtgtcatagttag |
1550198 |
T |
|
| Q |
236 |
attgttgcttatttggtaagtaagagtcctaggtaatgatatctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagattttatg |
335 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1550199 |
attgttgcttatttggtaagtaagagtcctaggtaatgatatctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagattttatg |
1550298 |
T |
|
| Q |
336 |
tttagtcttacaagcaagcttatggcttggctctatatatttgtagtgtatgcttaagtttaatgtatcaaagtatcttagc-ttttagtac-ttgttca |
433 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
1550299 |
tttagtcttacaagcaagcttatggcttggctctatatatttgtaatgtatgcttaagtttaatgtatcaaagtatcttagctttttagtactttgttca |
1550398 |
T |
|
| Q |
434 |
caaaacattgttgtcttctctaac |
457 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
1550399 |
caaaacattgttgtcttctctaac |
1550422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 132 - 457
Target Start/End: Original strand, 9535194 - 9535520
Alignment:
| Q |
132 |
atttgtgttggagattgatatttttctgatttaataattaattgtgttgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatag |
231 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
9535194 |
atttatgttggagattgatatttttctggtttaataattaattgtgttgttattttctgtcaaaattaatgtgttgcttgtttaagtttaagtgtcataa |
9535293 |
T |
|
| Q |
232 |
ttagattgttgcttatttggtaagtaagagtcctaggtaatgatatctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagattt |
331 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
9535294 |
ttagattgttgcttatttggtaagtaagagtcctaggtaatgatttctatggttcttaggtaatgatgactagtgtttagagtagatttagtgtagattt |
9535393 |
T |
|
| Q |
332 |
tatgtttagtcttacaagcaagcttatggcttggctctatatatttgtagtgtatgcttaagtttaatgtatcaaagtatcttagcttttagtac-ttgt |
430 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
9535394 |
tatgtttagtcttacaagcaagtttatggcttgactctatatatttgtagtgtatgtttaagtttaatgtatcaaagtatcttagcttttagtactttgt |
9535493 |
T |
|
| Q |
431 |
tcacaaaacattgttgtcttctctaac |
457 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
9535494 |
tcacaaaacattgttgtcttctctaac |
9535520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 415
Target Start/End: Complemental strand, 47695769 - 47695724
Alignment:
| Q |
370 |
atatatttgtagtgtatgcttaagtttaatgtatcaaagtatctta |
415 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
47695769 |
atatatttgcagtgtatgctttagtttaatgtatcaaattatctta |
47695724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 290; Significance: 1e-162; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 137 - 457
Target Start/End: Original strand, 28784457 - 28784778
Alignment:
| Q |
137 |
tgttggagattgatatttttctgatttaataattaattgtgttgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagttaga |
236 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
28784457 |
tgttggagattgatatttttctgatttaaaaattaattgtgttgttattttctctcataattaatgtgttgcttgtttaagtttaagtgttatagttaga |
28784556 |
T |
|
| Q |
237 |
ttgttgcttatttggtaagtaagagtcctaggtaatgatatctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagattttatgt |
336 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28784557 |
ttgttgcttatttggtaagtaagagtcctaggtaatgatgtctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagattttatgt |
28784656 |
T |
|
| Q |
337 |
ttagtcttacaagcaagcttatggcttggctctatatatttgtagtgtatgcttaagtttaatgtatcaaagtatcttagcttttagtac-ttgttcaca |
435 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
28784657 |
ttagtcttacaagcaagcttatggcttgattctatatatttgtagtgtatgcttaagtttaatgtatcaaagtatcttagcttttagtactttgttcaca |
28784756 |
T |
|
| Q |
436 |
aaacattgttgtcttctctaac |
457 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
28784757 |
aaacattgttgtcttctctaac |
28784778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 137 - 456
Target Start/End: Complemental strand, 48707901 - 48707575
Alignment:
| Q |
137 |
tgttggagattgatatttttctgatttaataattaattgtgttgttattttctgtcataattaatgtgttgcttgtttaagtttaagt------gtcata |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
48707901 |
tgttggagattgatatttttctgatttaataattaattgtgttgttattttctgtcataattaatgtgttgcttgtttaagtttaagtttaagtgtcata |
48707802 |
T |
|
| Q |
231 |
gttagattgttgcttatttggtaagtaagagtcctaggtaatgatatctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagatt |
330 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
48707801 |
gttagattgttgtttatttggtaagtaagagtcctaggtaatgatgtctatggtttttaggtaatgatgactagtgtttaaagtagatttagtgtagatt |
48707702 |
T |
|
| Q |
331 |
ttatgtttagtcttacaagcaagcttatggcttggctctatatatttgtagtgtatgcttaagtttaatgtatcaaagtatcttagcttttagtac-ttg |
429 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
48707701 |
ttatgtttagtcttacaagcaagcttatggcttgactctatatatttgtagtgtatgcttaaatttaacgtatcaaagtatcttagcttttagtactttg |
48707602 |
T |
|
| Q |
430 |
ttcacaaaacattgttgtcttctctaa |
456 |
Q |
| |
|
||||||||| ||||||||||||||||| |
|
|
| T |
48707601 |
ttcacaaaatattgttgtcttctctaa |
48707575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 136 - 456
Target Start/End: Complemental strand, 48024206 - 48023881
Alignment:
| Q |
136 |
gtgttggagattgatatttttctgatttaataattaattg-tgttgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagtta |
234 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||| || | || | ||||||||||||||||| ||||| |||||||| || ||||||||||| ||| |
|
|
| T |
48024206 |
gtgttggagattgatatttttctcttttgttaattattttctactgctgttttctgtcataattaaagtgttacttgtttatgtataagtgtcataatta |
48024107 |
T |
|
| Q |
235 |
gattgttgcttatttggtaagtaaga--gtccta-ggtaatgatatctatggttcttaggtaatgatgactagtgttta-gagtagatttagtgcagatt |
330 |
Q |
| |
|
||||||||||||||| |||||||| | |||| | ||||||||| |||| | ||||||||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
48024106 |
gattgttgcttatttagtaagtaaaacagtcccaaggtaatgatgtctaatgaacttaggtaatgatgactagtgcttaagagtagatttagtgcagatt |
48024007 |
T |
|
| Q |
331 |
ttatgtttagtcttacaagcaagcttatggcttggctctatatatttgtagtgtatgcttaagtttaatgtatcaaagtatcttagcttttagtacttgt |
430 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||| || || || | |
|
|
| T |
48024006 |
ttatgttcagtcttacaagcaagcttatggcttgactctatatatttgtagtgtatgcttcagtttaatgtataaaagtatcttaactgttttattttat |
48023907 |
T |
|
| Q |
431 |
tcacaaaacattgttgtcttctctaa |
456 |
Q |
| |
|
|||||||| ||||||||||||||||| |
|
|
| T |
48023906 |
tcacaaaatattgttgtcttctctaa |
48023881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 261 - 398
Target Start/End: Complemental strand, 5354688 - 5354551
Alignment:
| Q |
261 |
gtcctaggtaatgatatctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagattttatgtttagtcttacaagcaagcttatgg |
360 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
5354688 |
gtcctaggtaatgatgtttatggttcttaggtaataatgactagtgtttagagtagatttagtgcagattttatgtttagtcttacaagtaagcttatgg |
5354589 |
T |
|
| Q |
361 |
cttggctctatatatttgtagtgtatgcttaagtttaa |
398 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5354588 |
cttggctctatatatttgtagtgtatgcttaagtttaa |
5354551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 136 - 353
Target Start/End: Complemental strand, 48025317 - 48025095
Alignment:
| Q |
136 |
gtgttggagattgatatttttctgatttaataattaattg-tgttgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagtta |
234 |
Q |
| |
|
|||||||||||||||||||||||| ||| |||||| || | || | ||||||||||||||||| |||||||||||||| || ||| ||||||| ||| |
|
|
| T |
48025317 |
gtgttggagattgatatttttctgttttgttaattattttctactgctgttttctgtcataattaaagtgttgcttgtttatgtataaatgtcataatta |
48025218 |
T |
|
| Q |
235 |
gattgttgcttatttggtaagtaa---gagtcctaggtaatgatatctatggttcttaggtaatgatgactagtg-tttagagtagatttagtgcagatt |
330 |
Q |
| |
|
||||||||||||||| |||||||| | || || ||||||| ||||| |||||||||||||||||||||||| || ||||||||||||||| ||||| |
|
|
| T |
48025217 |
gattgttgcttatttagtaagtaaaacaatcccaagttaatgatgtctattgttcttaggtaatgatgactagtgcttaagagtagatttagtgtagatt |
48025118 |
T |
|
| Q |
331 |
ttatgtttagtcttacaagcaag |
353 |
Q |
| |
|
||||||| ||||||||||||| |
|
|
| T |
48025117 |
ttatgttccttcttacaagcaag |
48025095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 184 - 337
Target Start/End: Complemental strand, 48027448 - 48027291
Alignment:
| Q |
184 |
ttttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagttagattgttgcttatttggtaagt--aagagt-cctaggtaatgatatcta |
280 |
Q |
| |
|
||||||| ||||||| | |||||||||||||| || ||||||||||| |||||||||||||||||| |||||| || ||| ||||||||||||| |||| |
|
|
| T |
48027448 |
ttttctgccataatttaagtgttgcttgtttatgtataagtgtcataattagattgttgcttatttagtaagtaaaacagtccctaggtaatgatgtcta |
48027349 |
T |
|
| Q |
281 |
tggttcttaggtaatgatgactagtg-tttagagtagatttagtgcagattttatgtt |
337 |
Q |
| |
|
| |||||||||||||||||||||||| || ||||||||||||||| |||||||||||| |
|
|
| T |
48027348 |
ttgttcttaggtaatgatgactagtgcttaagagtagatttagtgtagattttatgtt |
48027291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 136 - 353
Target Start/End: Complemental strand, 48024757 - 48024535
Alignment:
| Q |
136 |
gtgttggagattgatatttttctgatttaataattaattg-tgttgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagtta |
234 |
Q |
| |
|
||||||||||||||||||||| || ||| |||||| || | || | ||||||||||||||||| |||||| |||||| || ||||||||||| ||| |
|
|
| T |
48024757 |
gtgttggagattgatatttttatgttttgttaattattttctactgctgttttctgtcataattaaaatgttgcatgtttatgtataagtgtcataatta |
48024658 |
T |
|
| Q |
235 |
gattgttgcttatttggtaagtaaga--gtccta-ggtaatgatatctatggttcttaggtaatgatgactagtg-tttagagtagatttagtgcagatt |
330 |
Q |
| |
|
||||||||||||||| |||||||| | |||| | ||||||||| | ||| |||||||||||||||||||||||| || | ||||||||||||| ||||| |
|
|
| T |
48024657 |
gattgttgcttatttagtaagtaaaacagtcccaaggtaatgatgtttattgttcttaggtaatgatgactagtgcttaatagtagatttagtgtagatt |
48024558 |
T |
|
| Q |
331 |
ttatgtttagtcttacaagcaag |
353 |
Q |
| |
|
||||||| ||||||||||||| |
|
|
| T |
48024557 |
ttatgttccttcttacaagcaag |
48024535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 413
Target Start/End: Original strand, 5913484 - 5913592
Alignment:
| Q |
305 |
tgtttagagtagatttagtgcagattttatgtttagtcttacaagcaagcttatggcttggctctatatatttgtagtgtatgcttaagtttaatgtatc |
404 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| | |||||||||||||||||||| ||| |||||||||||||| ||||| | | |||||||||| |
|
|
| T |
5913484 |
tgtttagagtagatttaatgcagattttatgttcaatcttacaagcaagcttatggtttgactctatatatttgttaagtatgatacaacttaatgtatc |
5913583 |
T |
|
| Q |
405 |
aaagtatct |
413 |
Q |
| |
|
||||||||| |
|
|
| T |
5913584 |
aaagtatct |
5913592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 390 - 452
Target Start/End: Complemental strand, 5353506 - 5353443
Alignment:
| Q |
390 |
taagtttaatgtatcaaagtatcttagcttttagtac-ttgttcacaaaacattgttgtcttct |
452 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
5353506 |
taagtttaatgtatcaaagtatcttagcttttagtactttgttcacaaaacattgttgtcttct |
5353443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 5907717 - 5907781
Alignment:
| Q |
136 |
gtgttggagattgatatttttctgatttaataattaattgtg-ttgttattttctgtcataatta |
199 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| ||||| |||| ||||||||||||||||| |
|
|
| T |
5907717 |
gtgttggagattgatatttttctggtttaataattacttgtgtttgtaattttctgtcataatta |
5907781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 224 - 309
Target Start/End: Original strand, 5907771 - 5907859
Alignment:
| Q |
224 |
tgtcatagttagattgttgcttatttggtaagt--aagagtc-ctaggtaatgatatctatggttcttaggtaatgatgactagtgttt |
309 |
Q |
| |
|
||||||| |||||||||||||||||| | |||| || |||| ||||||||| || | || |||||||||||||||||||||| ||||| |
|
|
| T |
5907771 |
tgtcataattagattgttgcttatttagcaagtgaaaaagtctctaggtaataatgtatacggttcttaggtaatgatgactaatgttt |
5907859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 241; Significance: 1e-133; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 137 - 457
Target Start/End: Original strand, 22804553 - 22804876
Alignment:
| Q |
137 |
tgttggagattgatatttttctgatttaataattaattgtgttgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagttaga |
236 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||| ||||| |
|
|
| T |
22804553 |
tgttggagattgatatttttctggtttaataattaattgtgttgttattttctctcataattaatgcgttgcttgtttaagtttaagtgccataattaga |
22804652 |
T |
|
| Q |
237 |
ttgttgcttatttggtaagtaa--gagtcctaggtaatgatatctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagattttat |
334 |
Q |
| |
|
||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
22804653 |
ttgctgcttatttggtaagtaaaagagtcctaggtaatgatgtctatggttcttaggtaatgatgactagtgtttagagtagatttaatgcagattttat |
22804752 |
T |
|
| Q |
335 |
gtttagtcttacaagcaagcttatggcttggctctatatatttgtagtgtatgcttaagtttaatgtatcaaagtatcttagcttttagtac-ttgttca |
433 |
Q |
| |
|
|||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| || |||| |
|
|
| T |
22804753 |
gtttagtcttacaaacagacttatggcttggctctatatatttgtagtgtatgtttaagtttaatgtatcaaagtatcttaacttttagtacttttttca |
22804852 |
T |
|
| Q |
434 |
caaaacattgttgtcttctctaac |
457 |
Q |
| |
|
||||| |||||| ||||||||||| |
|
|
| T |
22804853 |
caaaatattgttatcttctctaac |
22804876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 184 - 455
Target Start/End: Complemental strand, 7231118 - 7230847
Alignment:
| Q |
184 |
ttttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagttagattgttgcttatttggtaagtaag--agtcc-taggtaatgatatcta |
280 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||||||| |||||||| ||||||||| |||||||| ||||| ||||||||||| |||| |
|
|
| T |
7231118 |
ttttctgtcataattagattgttgcttgtttaagtt--agtgtcataattagattgctgcttatttagtaagtaaagtagtccgtaggtaatgatgtcta |
7231021 |
T |
|
| Q |
281 |
tggttcttaggtaatgatgactagtgtttagagtagatttagtgcagattttatgtttagtcttacaagcaagcttatggcttggctctatatatttgta |
380 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| | |||| |||| ||| ||||||||||||||||||| ||||| |
|
|
| T |
7231020 |
tggttcctaggtaatgatgactagtgtttagagcagatttagtgcagattttatgttcaatcttccaagaaagtttatggcttggctctatat-tttgtt |
7230922 |
T |
|
| Q |
381 |
gtgtatgcttaagtttaatgtatcaaagtatcttagcttttagtac-ttgttcacaaaacattgttgtcttctcta |
455 |
Q |
| |
|
||||||||| | ||||||| ||||||||||||||||||| ||| |||||| |||||| || |||||||||||| |
|
|
| T |
7230921 |
atgtatgctttaacttaatgtgtcaaagtatcttagctttt-ttacgttgttctcaaaactttattgtcttctcta |
7230847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 44640115 - 44640179
Alignment:
| Q |
137 |
tgttggagattgatatttttctgatttaat-aattaattgtgttgtt-attttctgtcataatta |
199 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||| | |||||||||| |||||||||||||||| |
|
|
| T |
44640115 |
tgttggagattgatatttttctggtttaataaatgatttgtgttgttgtttttctgtcataatta |
44640179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 149; Significance: 2e-78; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 178 - 456
Target Start/End: Complemental strand, 13108986 - 13108704
Alignment:
| Q |
178 |
ttgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagttagattgttgcttatttggtaagtaaga--gtcc-taggtaatga |
274 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||| | ||||||||||| |||||||||||||||||| |||||||| | |||| |||||||||| |
|
|
| T |
13108986 |
ttgttgttttctgtcataattaaagtgttgcttgtttatttataagtgtcataattagattgttgcttatttagtaagtaaaacagtccctaggtaatga |
13108887 |
T |
|
| Q |
275 |
tatctatggttcttaggtaatgatgactagtgttta-gagtagatttagtgcagattttatgtttagtcttacaagcaagcttatggcttggctctatat |
373 |
Q |
| |
|
|| ||| |||||| ||||||||||||||||| ||| |||||||||||| || ||||||| || |||||||||||||| ||||||||||| ||| |||| |
|
|
| T |
13108886 |
tacatattgttcttgggtaatgatgactagtgcttaagagtagatttagaacatattttatattcagtcttacaagcaaacttatggcttgactccatat |
13108787 |
T |
|
| Q |
374 |
atttgtagtgtatgcttaagtttaatgtatcaaagtatcttagcttttagtac-ttgttcacaaaacattgttgtcttctctaa |
456 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
13108786 |
atttgtagtgtatgcttcagtttaatgtatcaaagtatcttagctttt-ttactttgttcacaaaacattgttgtcttctctaa |
13108704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 137 - 456
Target Start/End: Complemental strand, 13111321 - 13110996
Alignment:
| Q |
137 |
tgttggagattgatatttttctgatttaataattaattgtgt-tgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagttag |
235 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||| || | || | ||||||||||||||||| |||||||||||||| || ||||| |||| |||| |
|
|
| T |
13111321 |
tgttggagattgatatttttctgttttgttaattactttttactgctgttttctgtcataattaaagtgttgcttgtttatgtagaagtgccataattag |
13111222 |
T |
|
| Q |
236 |
attgttgcttatttggtaagtaaga--gtcc-taggtaatgatatctatggttcttaggtaatgatgactagtgttta-gagtagatttagtgcagattt |
331 |
Q |
| |
|
|||||||||||||| |||||||| | |||| |||||||| || ||||| |||||||||||||||||||||||| ||| |||||||||||||||| |||| |
|
|
| T |
13111221 |
attgttgcttatttagtaagtaaaatagtccctaggtaataatgtctattgttcttaggtaatgatgactagtgcttaagagtagatttagtgcaaattt |
13111122 |
T |
|
| Q |
332 |
tatgtttagtcttacaagcaagcttatggcttggctctatatatttgtagtgtatgcttaagtttaatgtatcaaagtatcttagcttttagtac-ttgt |
430 |
Q |
| |
|
|||| | | |||||||||||||||||||||||||||| ||||||||||| | ||||||| |||||||||||||||| ||| |||| ||||| ||| |||| |
|
|
| T |
13111121 |
tatgctcactcttacaagcaagcttatggcttggctcaatatatttgtattttatgcttcagtttaatgtatcaaaatattttagtttttattactttgt |
13111022 |
T |
|
| Q |
431 |
tcacaaaacattgttgtcttctctaa |
456 |
Q |
| |
|
|||||||| ||||||||||||||||| |
|
|
| T |
13111021 |
tcacaaaatattgttgtcttctctaa |
13110996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 179 - 454
Target Start/End: Original strand, 6723446 - 6723726
Alignment:
| Q |
179 |
tgttattttctgtcataattaatgtgttgcttgtttaagtttaagtgtcatagttagattgttgcttatttggtaagtaaga--gtcc-taggtaatgat |
275 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| | |||| ||||| || || |
|
|
| T |
6723446 |
tgttgttttctgtcataattaaagtgttgcttgtttaagtgtaagtgtcataattagattgttgcttatttagtaagtaaaacagtccctaggtgataat |
6723545 |
T |
|
| Q |
276 |
atctatggttcttaggtaatgatgactagtgtttagagtagatttagtgcagattttat--gtttagtcttacaagcaagcttatggcttggctctatat |
373 |
Q |
| |
|
| ||| |||||||||||||||||||| |||||||||||||||||| | || ||||||| ||| |||||||||| ||| |||||| ||||||||||||| |
|
|
| T |
6723546 |
gtttattgttcttaggtaatgatgactcgtgtttagagtagatttaatacaaattttatatgttgagtcttacaaacaaacttatgacttggctctatat |
6723645 |
T |
|
| Q |
374 |
atttgtagtgtatgcttaagtttaatgtatcaaagtatcttagcttttagtac-ttgttcacaaaacattgttgtcttctct |
454 |
Q |
| |
|
|||| ||||||||| || |||||||||||||||| ||||||||| ||| |||| |||||| |||||| || |||||||||| |
|
|
| T |
6723646 |
atttatagtgtatgatttagtttaatgtatcaaaatatcttagcattt-gtactttgttctcaaaactttactgtcttctct |
6723726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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