View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7508_low_24 (Length: 290)
Name: NF7508_low_24
Description: NF7508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7508_low_24 |
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Alignment Details
Target: chr1 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 108 - 280
Target Start/End: Complemental strand, 13777277 - 13777105
Alignment:
| Q |
108 |
ggtgaatcggaaattggaatatgtaaccgcttatcgtactataaattagtctctatgatctcaagaattttagtaccaaaacatattgtctccttttgtt |
207 |
Q |
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| T |
13777277 |
ggtgaatcggaaattggaatatgtaaccgcttatcgtactataaattagtctctatgatctcaagaattttagtaccaaaacatattgtctccttttgtt |
13777178 |
T |
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| Q |
208 |
ttgatcatagttatccctcaaaatgtcactaaacaatgttttcgttttcattctcctttgttgtttttctctg |
280 |
Q |
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| T |
13777177 |
ttgatcatagttatccctcaaaatgtcactaaacaatgttttcattttcattctcctttgttgtttttctctg |
13777105 |
T |
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