View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7510_high_1 (Length: 334)
Name: NF7510_high_1
Description: NF7510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7510_high_1 |
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Alignment Details
Target: chr4 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 17 - 325
Target Start/End: Complemental strand, 44463755 - 44463447
Alignment:
| Q |
17 |
caatccagtcctagctcttgtcctagatgcactctggcctcaacttttgtttgagtttactttacaatcatgtaaagattagtaagcttcagcttaaggg |
116 |
Q |
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| T |
44463755 |
caatccagtcctagctcttgtcctagatgcactctggcctcaacttttgtttgagtttactttacaatcatgtaaagattagtaagcttcagcttaaggg |
44463656 |
T |
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| Q |
117 |
aagtgttagaatatctttattctatcataatatatcgtagattatcttaactgatctcttgtaattggtttccatatttccttattttcacgatttgctt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44463655 |
aagtgttagaatatctttattctatcataatatatcgtagattatcttaactgatctcttgtaattggtttccatatttccttattttcacgatttgctt |
44463556 |
T |
|
| Q |
217 |
tcttaattaattagtactacataaatctagcataaatataaataaggattagcgtatagcatatcactcacatcaaatatcaatataattttattgtttt |
316 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44463555 |
tcttaattaattagtattacataaatctagcataaatataaataaggattagcgtatagcatatcactcacatcaaatatcaatataattttattgtttt |
44463456 |
T |
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| Q |
317 |
gagtattat |
325 |
Q |
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| T |
44463455 |
gaatattat |
44463447 |
T |
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