View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7511_low_7 (Length: 282)
Name: NF7511_low_7
Description: NF7511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7511_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 27 - 274
Target Start/End: Complemental strand, 37137293 - 37137046
Alignment:
| Q |
27 |
aaaataagtgagttgaaattcatgtaacaatgttaattctatataacaacaatattaacttgagtttttattatgcatgtgataatctaataggaatcga |
126 |
Q |
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| T |
37137293 |
aaaataagtgagttgaaattcatgtaacaatgttaattctatataacaacaatattgacttgagtttttattatgcatgtgataatctaataggaatcga |
37137194 |
T |
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| Q |
127 |
atatgtcaaattgcaagaagagttgagtgattttacctgttgacaattgagaagagctaaaatctttcttctgactctcatcaatgctcttcttcttctt |
226 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37137193 |
atgtgtcaaattgcaagaagagttgagtgattttacctgttgacaattgagaagagctaaaatctttcttctgactctcatcaatgctcttcttcttctt |
37137094 |
T |
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| Q |
227 |
catggttgacaccaaaggaacaatgccttcttcatcttcatattcttc |
274 |
Q |
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| T |
37137093 |
catggttgacaccaaaggaacaatgccttcttcatcttcgtattcttc |
37137046 |
T |
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