View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7513_high_3 (Length: 311)
Name: NF7513_high_3
Description: NF7513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7513_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 18 - 298
Target Start/End: Complemental strand, 48166057 - 48165777
Alignment:
| Q |
18 |
acatccctggttgtggatgaaatgattggttgcaactttgccattgttcttgagaaaggaacatttgtccttttgtgttacggacttgtgaggccatggc |
117 |
Q |
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| T |
48166057 |
acatccctggttgtggatgaaatgattggttgcaactttgccattgttcttgagaaaggaacatttgtccttttgtgttacggacttgtgaggccatggc |
48165958 |
T |
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| Q |
118 |
atctgacaaaatggtcagagcatttctgcagcagagagtagttgggaaaccatcactgccactgccccatttggttatatcctcttttgcacccccacat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48165957 |
atctgacaaaatggtcagagcatttctgcagcagagagtagttgggaaaccatcactgccactgccccatttggttatatcctcttttgcacccccacat |
48165858 |
T |
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| Q |
218 |
tcaccaaaaggcatatattcattttggtatgcattgaaatccaataaacatgtacctgcaccaaatggaaagagttatata |
298 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48165857 |
tcaccaaaaggcatatattcattttggtatgcattgaaatccaataaacatgtacctgcaccaaatggaaagagttatata |
48165777 |
T |
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